<?xml version="1.0" encoding="UTF-8"?>
<uniprot xmlns="https://uniprot.org/uniprot"
 xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
 xsi:schemaLocation="http://uniprot.org/uniprot http://www.uniprot.org/docs/uniprot.xsd">
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P112</accession>
    <name>A0ACC3P112_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L004043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="39266" checksum="DED26414C6E92E14" modified="2026-01-28" version="1">MATDSSNGNGHHETTTTKKPPSPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLQKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVTDLVDGLIRLMEGTNTGPINLGNPGEFTMTELAETVKELINPDVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEENFRLRLGVGKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1A9</accession>
    <name>A0ACC3P1A9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L010743</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="857" mass="96168" checksum="53F2CBCD8AFAD85E" modified="2026-01-28" version="1">MAFLFAFVAIVLWGSAEGKECTNNIAQSHTYRYQLLTSMNETWNIISHYNLAPKGDHDHIWADLVPRKLLKEEYQHDWDVMLRKIEKVGVLKAPHQRQDFLKQVSLHDVRLHEGSVHARAQQTNLEYLLMLDVDRLLWSFRNTAGLPTPGTPYGGWEDPKIELRGHFVGHYLSASALMWASTHNDRLKKKMSALVANLSICQEKIGTGYLSAFPSEFFDRFEATEHVWAPYYTIHKILAGLLDQHSIARNPQALNMVKWMVDYFYNRVQNVITKFSISRHYQSLNEETGGMNDVLYKLYSITGDQRHLLLAHLFDKPCFLGLLAVKANDIANFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDLVNSSHTYATGGTSVGEFWSDPKRIGDTLESTDNEESCTTYNMLKVSRHLFRWSKKVSYADYYERALTNGVLSIQRGTEPGVMIYMLPQGRGVSKAKTSLGWGTKFDSFWCCYGTGIESFSKLGDSIYFEEGGKNPTLYIIQYISSLFNWKSGQIIVNQTVVPAVSWDPFLRVSFTFSPAKKTGALSTINLRLPTWTHKDGAKGVLNNESLSLPTPGNFLSITRKWNAGDKLSLQFPMTLRTEAIKDDRSQYASIQAILYGPYVLAGHTTGDWDIKAAPNASIEDWITPIPASYNSQLFYFSQAFANSTYVLTNSNHPLAMQKLPVPGTDLALHATFRVIPGKSATKFTTLTDAVGKTVMLEPYDHPGMRVIHQGMEHPLTVAGSSSGCSSCVFVVVPGLDGRKETISLESKSYNGCFVHSGLHSGRGVKLSCKTSSDATFKESASFFGKRGISKYNPISFVARGANKNFLLEPLLAFRDESYTPYFNIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1P0</accession>
    <name>A0ACC3P1P0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967862">
        <property type="protein sequence ID" value="KAK6645741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="520" mass="57838" checksum="DE0331B4D5F2A6A8" modified="2026-01-28" version="1">MLAYLEHFVHEKDAESRQDDEVASLSRALELQASIDELGPAGIASKDFGGIKSVKPLAMIRPSSAVDVARVVKAVAASPSLTVAARGNGHSVNGQAMAEKGLVLDMRALEEPFEILWIEGTAYLEVSGGALWEDVLKRCVSEVGLAPRSWTDYLGLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGETLCCSLTQNSELFFGALGGLGQFGIITRARVVLQQAPEMVRWIRVVYSEFEEYAGDAELLVEEVEECFDYVEGFVLVNSDDPANGWPTVPLEPEQVFDPVHIPSTAGPVLYCLELGLHYGNADHPYRSRVDMDVDRLLGRLRFIQGLKFQTDVTYTEFLLRVKRVEEDAKASGTWDAPHPWLNLFVSKSNIVDFDREVFKKILKDGVDGPILVYPLLRTKWDNRHSVVVPDSDIFYIVALLRFSPPPPKGPPAELLVAQNNEIIQFCTSRGLDFKLYFPNYQSREDWMKHFGKQWSRFVERKASFDPMAILAPGQRIFSRTSQPPSIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF83</accession>
    <name>V7AF83_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_011G078300g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. Required for the regulation by SnRK1 kinases of the transcription of a large set of genes, the modification the activity of metabolic enzymes, and the control of various nutrient-responsive cellular developmental processes.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">Associates with the SNF1-related protein kinase (SnRK) complex. Interacts with AL1, a geminivirus (TGMV) protein essential for viral replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF83"/>
    <dbReference type="SMR" id="V7AF83"/>
    <dbReference type="STRING" id="3885.V7AF83"/>
    <dbReference type="Gramene" id="ESW04237">
        <property type="protein sequence ID" value="ESW04237"/>
        <property type="gene ID" value="PHAVU_011G078300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0585">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHLIERM"/>
    <dbReference type="OrthoDB" id="68483at2759"/>
    <dbReference type="PhylomeDB" id="V7AF83"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009615">
        <property type="term" value="P:response to virus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd14008">
        <property type="entry name" value="STKc_LKB1_CaMKK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000747">
        <property type="entry name" value="Serine/threonine-protein kinase GRIK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000206">
        <property type="entry name" value="Serine/threonine-protein kinase Ssp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24346">
        <property type="entry name" value="MAP/MICROTUBULE AFFINITY-REGULATING KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24346:SF62">
        <property type="entry name" value="SERINE_THREONINE KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 14" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="121"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="57"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00054601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00066296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW04237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="412" mass="46374" checksum="481E144E4941BB4A" modified="2014-02-19" version="1">MFEKILSFACVMGCCSCFGFIRTPNRQRQRSKPAINNNLSQEPLLDVDDDIEDEEGEDLYNDEVSNSSGDDADEETRPKRSEDILNFRVENGMVCRQFPVKDTHKVVRMEDENGNKMINEYIREYKIGSGSYGKVALYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVFIMKMVEHPNIVNLIEVIDDPESDNFYMVLEYVEGKWVCEGSGPACGLGEETARRYLRDIVSGLTYLHAHNIVHGDIKPDNLLITHHGTVKIGDFSVSQAVEDNKDELRRSPGTPVFTAPECILGLTYGGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPNDLNPPLKNLIEGLLSKDPRLRMTLGDVAEDSWIIGDDGPIPEYLCWCKRKSLGIEDHDESKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFD9</accession>
    <name>V7AFD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_011G057900g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFD9"/>
    <dbReference type="SMR" id="V7AFD9"/>
    <dbReference type="Gramene" id="ESW03990">
        <property type="protein sequence ID" value="ESW03990"/>
        <property type="gene ID" value="PHAVU_011G057900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0610">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYFAWAV"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000294">
        <property type="entry name" value="Serine/threonine-protein kinase OXI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000312">
        <property type="entry name" value="Serine/threonine-protein kinase OXI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000807">
        <property type="entry name" value="Serine/threonine-protein kinase UCNL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 14 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 14 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 15" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="23"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW03990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="421" mass="47890" checksum="2E875CCE7845441B" modified="2014-02-19" version="1">MDSARTAPPMLQEQEQELELDNLKALKVLGKGAMGTVFLVHQTTNNSTFALKVVDKTSVHAKLDAERRARWEIQVLSTLSHPFLPSLMGTFESPQFLAWALPYCPGGDLNVLRYRQTDRAFSPTVIRFYVAEILCALHHLHSMGIAYRDLKPENVLIQNNGHVTLTDFDLSRKLTLKPKPLLPSIPVPNLNLPEPRRKHRRNFSRWIPLRALDGNRRKANSNALKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGTTPFKGKNRKETFRNVLTKAPEFVGKRTALTDLIEKLLAKDPTRRLGYTRGAADIKEHEFFRGVKWELLTEVVRPPFIPSRDDVSVESMERLSAGNSGMDIRDYFQNLRSLPPSPSPSASPRWRFKKNVSLTEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFT6</accession>
    <name>V7AFT6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G032600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFT6"/>
    <dbReference type="SMR" id="V7AFT6"/>
    <dbReference type="STRING" id="3885.V7AFT6"/>
    <dbReference type="Gramene" id="ESW03673">
        <property type="protein sequence ID" value="ESW03673"/>
        <property type="gene ID" value="PHAVU_011G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0521">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGFREAM"/>
    <dbReference type="OrthoDB" id="194358at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08204">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd07606">
        <property type="entry name" value="BAR_SFC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13250">
        <property type="entry name" value="PH_ACAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.60">
        <property type="entry name" value="Arfaptin homology (AH) domain/BAR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045258">
        <property type="entry name" value="ACAP1/2/3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035670">
        <property type="entry name" value="AGD1/2/3/4_BAR_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027267">
        <property type="entry name" value="AH/BAR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004148">
        <property type="entry name" value="BAR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23180:SF244">
        <property type="entry name" value="ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23180">
        <property type="entry name" value="CENTAURIN/ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16746">
        <property type="entry name" value="BAR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00169">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00721">
        <property type="entry name" value="BAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00233">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103657">
        <property type="entry name" value="BAR/IMD domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PH" evidence="8">
        <location>
            <begin position="295"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="Arf-GAP" evidence="9">
        <location>
            <begin position="480"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="5">
        <location>
            <begin position="683"/>
            <end position="715"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="5">
        <location>
            <begin position="716"/>
            <end position="748"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="443"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW03673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="775" mass="87525" checksum="E8C47B193E0F2D75" modified="2014-02-19" version="1">MASAFVKLDDSPMFQKQLFSLEETTDELKDRCQKLYNGCKKFMTALGEAYNGEISFADSLEVFGGGQDDPVSVSIGGPVITKFITTLRELASFKELLRSQVEHVLVDRLTEFISIDLQDTKDSRRRFDKAVHSYDQSREKFVSLKKNTPEDVVAELEEDLQNSKSTFEKSRFNLVNSLMNIEAKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKELANIEQDKLAKRIQEYRTQAELENIQVSSNFTETIPGSEGTHVVGLNSYRSLDSGMLSAPKGELQTVKQGYLLKRSSGSRGDWKRRFFVLENQGNLYYYRVKGAKPTGSQAYNYGRSYEQNSGMFGRFRSKHNRAASLNDDILGCYTIDLCTSTIKMDAEDTDLRLCFRIISPSKTFTLQAENEAARMDWVNKITGAITSLFNSQFLQQPQYGRENSQKKNLPPIGASLSSQSEDGQKSLRDDLYFKEGGSVSKILRGIPGNDKCAECSASEPEWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVRVWENTILELFDNLGNAYCNSIWEGLLLLDHERVGELHVPVKPCSTDAFQIKEKYIQAKYVEKSLIIREEDIPENPSVTIKIWQAVQAANVREVYRLVVTSTSNLINTKYGDEVHHAADAEGQQHDPEACLKVEETIETERCFRGWSLLHLACLTDSVLMVELLLQFGADVNMCDYHGRTPLHHCITSGKNKLAKFLLRRGARPSVKDAGGLSILERAMEMGAITDEELFIMLAEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGJ8</accession>
    <name>V7AGJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Fatty acyl-CoA reductase</fullName>
            <ecNumber evidence="4">1.2.1.84</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G092400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a long-chain fatty acyl-CoA + 2 NADPH + 2 H(+) = a long-chain primary fatty alcohol + 2 NADP(+) + CoA</text>
            <dbReference type="Rhea" id="RHEA:52716"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:77396"/>
            <dbReference type="ChEBI" id="CHEBI:83139"/>
            <dbReference type="EC" id="1.2.1.84"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the fatty acyl-CoA reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.84" evidence="4"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGJ8"/>
    <dbReference type="SMR" id="V7AGJ8"/>
    <dbReference type="STRING" id="3885.V7AGJ8"/>
    <dbReference type="Gramene" id="ESW04405">
        <property type="protein sequence ID" value="ESW04405"/>
        <property type="gene ID" value="PHAVU_011G092400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1221">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LIVESMY"/>
    <dbReference type="OrthoDB" id="429813at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102965">
        <property type="term" value="F:alcohol-forming long-chain fatty acyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080019">
        <property type="term" value="F:alcohol-forming very long-chain fatty acyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035336">
        <property type="term" value="P:long-chain fatty-acyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010345">
        <property type="term" value="P:suberin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05236">
        <property type="entry name" value="FAR-N_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09071">
        <property type="entry name" value="FAR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026055">
        <property type="entry name" value="FAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033640">
        <property type="entry name" value="FAR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013120">
        <property type="entry name" value="FAR_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11011:SF84">
        <property type="entry name" value="ACYL-COA REDUCTASE-LIKE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11011">
        <property type="entry name" value="MALE STERILITY PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07993">
        <property type="entry name" value="NAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03015">
        <property type="entry name" value="Sterile"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="3 4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioester reductase (TE)" evidence="6">
        <location>
            <begin position="13"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acyl-CoA reductase C-terminal" evidence="5">
        <location>
            <begin position="391"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="56422" checksum="4F4AB2FBCD44D9DE" modified="2014-02-19" version="1">MSEFFKGKTILMTGTTGFLAKVFLEKILRTQPQVHKLYLLVRAKTIDLAAQRFQNEVIRTYLFRVLRDQWGKDFDSFILKKIVVISGDVSLHNFGLEDEKLKIKMFEEINIIINFAATTKFDERFDISIDVNTMGVLHVLNFAKHCPEIKIFMQISTAYVCGEIKDEKTIVQEKPFEMGQTLKKSSKLDITEEMNLLKKKIDELRSKNATESTIKNALKDYGIERANLYGWPNTYAFTKAMGEMQLVHHKDNVPLIIIRPTMVTSTLKDPFPGWIEGLRTLDSIICSYGQGKITNFLGHPKTILDTIPADMVINCMMTAIIAFSNQTPKNFVYHISSSLRNPFRIADVHDYCYHYFIKFALKNKNGKPIIVPKPNLISSRAVFDIYMTIRYVFPLKVLNVVNKAFCQCSRDVYDDSYKKFKRVTRLVEVYKPYLFFKGVFDDSNTQNLRRATSNNIEVAAGLNFDPNSINWKDYMMNTHIPGLVKYALK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGW6</accession>
    <name>V7AGW6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G067000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGW6"/>
    <dbReference type="SMR" id="V7AGW6"/>
    <dbReference type="STRING" id="3885.V7AGW6"/>
    <dbReference type="Gramene" id="ESW04098">
        <property type="protein sequence ID" value="ESW04098"/>
        <property type="gene ID" value="PHAVU_011G067000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFNFPPL"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044676">
        <property type="entry name" value="EOBI/EOBII-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45675:SF82">
        <property type="entry name" value="MYB TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45675">
        <property type="entry name" value="MYB TRANSCRIPTION FACTOR-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="36"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="72"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW04098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="199" mass="22352" checksum="4577E12B698E9A9F" modified="2014-02-19" version="1">MELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKKKALEKKRASSSSSSSSSSPVSSSSLSSPSSSNHAADSHGSKEVGEESFYDTGGCDDIMGLIGAGDEEGGEKGYSLDDIWEDIVMSEEKDMYDILQPVYEGHSEEGCNFSCPYPMIYSPSSWEYNSSHPLWVMDEEESSKMLFPTLTDQYYSCYEQGNAFLTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI16</accession>
    <name>V7AI16_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Large ribosomal subunit protein uL2 RNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G135500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI16"/>
    <dbReference type="STRING" id="3885.V7AI16"/>
    <dbReference type="Gramene" id="ESW04905">
        <property type="protein sequence ID" value="ESW04905"/>
        <property type="gene ID" value="PHAVU_011G135500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0438">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYICLTH"/>
    <dbReference type="OrthoDB" id="1848840at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
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        <property type="term" value="C:mitochondrial large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032543">
        <property type="term" value="P:mitochondrial translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="50S ribosomal protein L2, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_uL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Ribosomal_uL2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691:SF5">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="RIBOSOMAL PROTEIN L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL2 RNA-binding" evidence="6">
        <location>
            <begin position="21"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="91" mass="10465" checksum="F2F56A9C62D28AB9" modified="2014-02-19" version="1" fragment="single">SQVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRQIDFRRNEKNIYGRIVTIEYDPNRNASICLIHYGDGEKKYILHPRGAII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ33</accession>
    <name>V7AJ33_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histone H4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G164600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the histone H4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ33"/>
    <dbReference type="STRING" id="3885.V7AJ33"/>
    <dbReference type="Gramene" id="ESW05245">
        <property type="protein sequence ID" value="ESW05245"/>
        <property type="gene ID" value="PHAVU_011G164600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3467">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22912">
        <property type="entry name" value="HFD_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000002">
        <property type="entry name" value="Histone H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035425">
        <property type="entry name" value="CENP-T/H4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001951">
        <property type="entry name" value="Histone_H4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019809">
        <property type="entry name" value="Histone_H4_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10484">
        <property type="entry name" value="HISTONE H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15511">
        <property type="entry name" value="CENP-T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00623">
        <property type="entry name" value="HISTONEH4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00417">
        <property type="entry name" value="H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00047">
        <property type="entry name" value="HISTONE_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 9" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-T/Histone H4 histone fold" evidence="11">
        <location>
            <begin position="186"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="75"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="82"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF15511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="244" mass="28116" checksum="00DF7C23A90749E1" modified="2014-02-19" version="1">MEFFLTPSKVFRFGRILMEGEDMEAEGMIKMGQRWIWNKGCSEANLTSKFWAEKIEKEKPLREDDELVQTFKRWRRPPKTGVKTNKMTSKTRQPKKKNQTKTLNPQIRSKSFSGVSFFQSKLEEIPKSRDWIDFARKGVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJD9</accession>
    <name>V7AJD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Beta-glucosidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G201700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJD9"/>
    <dbReference type="SMR" id="V7AJD9"/>
    <dbReference type="Gramene" id="ESW05697">
        <property type="protein sequence ID" value="ESW05697"/>
        <property type="gene ID" value="PHAVU_011G201700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HILMAHA"/>
    <dbReference type="OrthoDB" id="65569at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000020">
        <property type="entry name" value="Beta-glucosidase 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="GH_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF327">
        <property type="entry name" value="GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753436" description="Beta-glucosidase" evidence="5">
        <location>
            <begin position="20"/>
            <end position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW05697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="530" mass="60411" checksum="784A7CCE57EA9566" modified="2014-02-19" version="1">MKVSMKIAAMAFNLHLLSGVLLLMISVPICIEGSISIFSTDDFRSTSLNRSSFPKDFIFGAASSAYQCEGAANVGGRGPSIWDTYTHNRPDKILDRSNGDVSIDQYHRYKEDVENIKEMNMDAYRFSISWSRILPKGKVSGGVNKEGINYYNNLINELLAKGLKPFVTIFHWDLPQALEDEYDGFLSPNIVNDFQDYAELCFKEFGDRVKHWITLNEPWTFSKYGYADAISPPGRCSAWQNLSCTTGDSATEPYIVSHNQLLAHAASVNVYKTKYQVSQKGVIGISLSCHWIVPLYDTESDQFAAERALDFMFGWFMEPLTIGEYPKSMQSLVGSRLPKFSADEIKLVRGSFDFIGINYYTSYYASDTPELSEARPSYLTDSLVILTSERNGIPIGKMTTSKWLYVCPKGIHDLLLYIKTKYNNPLIYITENGIDEFNDHTLSLEEALADTSRIDYFYDHLYYLQSAIENGVNVKGYFAWSLTDSFEWNLGYISRFGTIFVDYHNLKRYPKSSAIWFRDFLQGKIDTYDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJJ7</accession>
    <name>V7AJJ7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G146700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJJ7"/>
    <dbReference type="SMR" id="V7AJJ7"/>
    <dbReference type="STRING" id="3885.V7AJJ7"/>
    <dbReference type="Gramene" id="ESW05038">
        <property type="protein sequence ID" value="ESW05038"/>
        <property type="gene ID" value="PHAVU_011G146700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZDK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAFQAFE"/>
    <dbReference type="OrthoDB" id="659599at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33625">
        <property type="entry name" value="OS08G0179900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33625:SF4">
        <property type="entry name" value="OS08G0179900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="32785" checksum="1CF56A696CEE7804" modified="2014-02-19" version="1">MGGGGAMRTAAKIAGVGVSRSGLRGSTASLPTEQSVRNASRSSVAGVSAQGVKTAEVAPLHAAAPWDDWDFAEDGDLVVPRMVFGSAPTFEEAKEATTELKDAIDQVYLSPDSSKYSSPGDEVSTLSPTLYEPVNRSCVFDTISNPSVPNHAIQAFNLLSTSHEAQAVVASLASDPNVWNAVMENPVVYRFFQSQQTVADFGEVETTEKVEKLSTCASEEIETPDKREATAESDLGSMFSDFIGFLQNLKLTVTELVSSVSDFLQNIFPSPDTQKMAGDAVGNNKANLMGGTFMGLAVLVIMVIVTKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJM3</accession>
    <name>V7AJM3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PTC1-like winged helix-turn-helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G181300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJM3"/>
    <dbReference type="SMR" id="V7AJM3"/>
    <dbReference type="STRING" id="3885.V7AJM3"/>
    <dbReference type="Gramene" id="ESW05465">
        <property type="protein sequence ID" value="ESW05465"/>
        <property type="gene ID" value="PHAVU_011G181300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU2W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GFQICKP"/>
    <dbReference type="OrthoDB" id="515863at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051177">
        <property type="term" value="P:meiotic sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007131">
        <property type="term" value="P:reciprocal meiotic recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044221">
        <property type="entry name" value="DYAD/AMEIOTIC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059080">
        <property type="entry name" value="WHD_PTC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46740">
        <property type="entry name" value="PROTEIN DYAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46740:SF2">
        <property type="entry name" value="PROTEIN DYAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25874">
        <property type="entry name" value="WHD_plant_repro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PTC1-like winged helix-turn-helix" evidence="3">
        <location>
            <begin position="334"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="295"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="556"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="509"/>
            <end position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="727" mass="81815" checksum="EDC07E63370BC5E7" modified="2014-02-19" version="1">MLLLCTVQIVEQSPRGFVAAGTDEEMVSFFLSHFTKSSYLKRQEKRDVQVDEGRSKRSPCLDKHVLLFPPASESTSAIGAWEHFKVGLFHEIDHSRLSPISPVQLKSVLIVMVSDIGEHLVSLRYPSLQSLRMYFSDQNFGKPDGKTIPALDEKYVMGMDFAIKALSRSIPTEEFAQRRNSWSFWVSPSKENTQDSENLTLNDAASSLISKQGSCWTQLKFTGMMQWGKRRQVRFLGRHEEPKVESLPELCKGKMVSVELREGTSEKKRKKGEEEVEATKEESFGDMRITRLCRQNHQNVGSSGDKKSKKAKNDPKKQQLVLYNKNKRKISIGRWSAERYVLAEENMLKVMKEKRAVYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGAMEYWLESADLVEMRKEAGVQDPYWTPSPGWKLGDSISQDYVTGSELREIKEEILKLKQDMRELASKKGEEVLAIENTPSSCLSSLNSEDYGFLAPKEEIYAELVTKKAKIEEQLKEISRTLSCMEEKLKMLKPTMVVEQIMSESETPQAFFPGPTSVNIGGETRKEKKSYKNKADTQMQKNNIAAEDKTAKIERLKSGFQICKPQGTFVWPKIGMSPHVVANHDDHTLVPTPPSASSSTTSGPNLIFKPQPQHLPLQILTHPSSPVKPVAERRPVSTATLTHVTGPFSPSLSPPSGTPISKITTTITINLNEAPLTLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK54</accession>
    <name>V7AK54_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G010000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK54"/>
    <dbReference type="STRING" id="3885.V7AK54"/>
    <dbReference type="Gramene" id="ESW05987">
        <property type="protein sequence ID" value="ESW05987"/>
        <property type="gene ID" value="PHAVU_010G010000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2102">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YEAMHIQ"/>
    <dbReference type="OrthoDB" id="2285229at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056404">
        <property type="entry name" value="HTH_RNase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056403">
        <property type="entry name" value="RNase_II_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057324">
        <property type="entry name" value="WH_RNase_II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23163">
        <property type="entry name" value="CSD_RNase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23161">
        <property type="entry name" value="HTH_RNase_II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25255">
        <property type="entry name" value="WHD_RNase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ribonuclease II-like barrel" evidence="2">
        <location>
            <begin position="94"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="Ribonuclease II winged helix" evidence="3">
        <location>
            <begin position="158"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Ribonuclease II-like double HTH" evidence="1">
        <location>
            <begin position="237"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="Ribonuclease II-like double HTH" evidence="1">
        <location>
            <begin position="349"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF23161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="427" mass="48173" checksum="372C2818571E52F4" modified="2014-02-19" version="1" fragment="single">MAVRAVATCSLFRPPSPSLFSATLRLYSSRYRFSRSLRHASHSHARSIHSVFDTVMEELRATRRSRHKRVSAAASSMGLLNKELVEDRLVNRSLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVSDQNGVTSSIKLQQVTYIVPGIDNFDQADITDFALKAQDNMDPSLLEYAWVELLEKNKSVTVEELAEIIYGSTEPLESYSAHLLLSTDEVYFTILETKGARSIYGPRPSRQVEELIKRKHAKEAAEKELQEFIELLASVKSMSLQDKPPKSSWTNDEKIWKRIESLVAYAIDACKSDEQRKTIRNSIEELDQIELYEAMHIQVAITSLGMRKDDLGGSFLGSLQILKELGLAKTTSSAVKLLIDIGYFPVHINLDLLKSGIPTDHSEEIISAAQTLLLDTFDPDKVGFVFLTTLLKYEINHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM89</accession>
    <name>V7AM89_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G009200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM89"/>
    <dbReference type="Gramene" id="ESW05978">
        <property type="protein sequence ID" value="ESW05978"/>
        <property type="gene ID" value="PHAVU_010G009200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SCI6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="STWTEPC"/>
    <dbReference type="OrthoDB" id="754109at2759"/>
    <dbReference type="PhylomeDB" id="V7AM89"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37078">
        <property type="entry name" value="NODULE CYSTEINE-RICH (NCR) SECRETED PEPTIDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37078:SF6">
        <property type="entry name" value="NODULE CYSTEINE-RICH (NCR) SECRETED PEPTIDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753572" evidence="1">
        <location>
            <begin position="27"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="89" mass="9442" checksum="B6717CACD00DC2A5" modified="2014-02-19" version="1">MGIVVITKNKPHVLVLLVVLIASSVAEKTSVVEGRTLSLKPLQGFSKNLAELGVVCKCCDGGGGDCRSTWTESCSNLQCSPWKSHLIIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7API8</accession>
    <name>V7API8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G141200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7API8"/>
    <dbReference type="STRING" id="3885.V7API8"/>
    <dbReference type="Gramene" id="ESW07572">
        <property type="protein sequence ID" value="ESW07572"/>
        <property type="gene ID" value="PHAVU_010G141200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3120">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRDWTDG"/>
    <dbReference type="OrthoDB" id="10267182at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006384">
        <property type="entry name" value="HAD_hydro_PyrdxlP_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016965">
        <property type="entry name" value="Pase_PHOSPHO-typ"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01489">
        <property type="entry name" value="DKMTPPase-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01488">
        <property type="entry name" value="HAD-SF-IB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20889:SF12">
        <property type="entry name" value="LP01149P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20889">
        <property type="entry name" value="PHOSPHATASE, ORPHAN 1, 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06888">
        <property type="entry name" value="Put_Phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="343" mass="39291" checksum="931AC66C52477DFC" modified="2014-02-19" version="1">MFATTNYPCNIPLESKILFLFHSFTITINTLFAFHCKTKLRTTNLQSTIYTHPNRALFFRKKLSFFNLPKQIMSGIVVVFDFDKTIVDVDSDNWVVDELGFTDLFNQLLPTMPWNTLMDTMMKELHSHGKSIKDIEEVLHKIPLHPRVIPAIKAAHALGCDLRIVSDANTYFIETILKHLGIREYFSEMNTNPGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLVIKRIQDSISEEDKRLIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPSVVKAEIHGWSDGEELEQVLLQLISKVSMEHNSPFITSDCKLQTLSLSVLEALPKALPLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7APV8</accession>
    <name>V7APV8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G030900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APV8"/>
    <dbReference type="STRING" id="3885.V7APV8"/>
    <dbReference type="Gramene" id="ESW06241">
        <property type="protein sequence ID" value="ESW06241"/>
        <property type="gene ID" value="PHAVU_010G030900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVQH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPTANFW"/>
    <dbReference type="OrthoDB" id="552191at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14000">
        <property type="entry name" value="FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14000:SF17">
        <property type="entry name" value="MYB-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="400" mass="44667" checksum="6DFFAEF085613870" modified="2014-02-19" version="1">MPDRKSYVQSQILTLRRSPRFLPQLNHTTPNPKSATASVKKSNDCTVESRISPRLNHGDVGFSSLRRSPRFNNEGAGRGSKKGENREIIGVKTKENYVVCDEGFGGNGGNGGNGEKRKRNGDEIGKGWTKEQDLSLQRAYLTAKPSPHFWKNVSKLVPGKSQQECFDRIHFDHVTPVLLQPRSRAKTLKSSPIQEFSLSASNLLNPIDIKVRRSNVLKPKNITTQKSVEKLLLLTDDLDRAGDIFSVLEPKIDLSTNALQPSESLSTPQQLKENKGFLQSCTETSSSSGNKLLSRFSGSHITDLVSPPVLKKVKNRVLHEKYVNKLRCRESRRRAASEKIIGEGRSIKRKDAVKAAKFALVSEARDAINKFRELQVNVMDNCCSSDEDNDDDIQLEDESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQD5</accession>
    <name>V7AQD5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Calycin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G046700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQD5"/>
    <dbReference type="STRING" id="3885.V7AQD5"/>
    <dbReference type="Gramene" id="ESW06421">
        <property type="protein sequence ID" value="ESW06421"/>
        <property type="gene ID" value="PHAVU_010G046700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRJC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPYVYLC"/>
    <dbReference type="OrthoDB" id="1929023at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36025">
        <property type="entry name" value="DIHYDROOROTATE DEHYDROGENASE (DUF3598)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36025:SF1">
        <property type="entry name" value="DIHYDROOROTATE DEHYDROGENASE (DUF3598)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="Lipocalins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="486" mass="54908" checksum="B6982E448A14E346" modified="2014-02-19" version="1">MQSPSSLYLSKSFVTTHHHLGFHHTLSSNHNSLSSLSPSLIKPCSTRLITAQAQKSNNYKRNGPKEGVRVRGNKENVWSIDNDLAKMASSQKDKRRKRRVVKRNGEKGGRIIVSGAMLVEVETVLQTQEPVIKPVWNTFASSLSGVWKGVGAVFSPITAEMEPMDIGSKNENLYDCYTLSRIEAAPSVSGERTSQIQRKVNWVTLNPYGEIPQHTKDRKHKSSENVINRTLPTFESFDLKSSDVMEEDVMGCEPGLVYFEDGSYSRGPMDIPLGESDDTKYYVSPTFKFEQCLVKGCHKRIRIVHTIEFSNGGSDIQIMRVAVYEEEWASPASIDDQSFDIEMDVKPLSQRKRTKPSELTGSWKVFEISATPVYGEESMAEEGTETPYVYLCTENLKKRSLPENTNYFGEEERLDMQDVTVLWLPGGVTCYVDINKDGILCIGVGWYSDEGINLVMERDYGLDGKLKEVRWKSEVKRRWSSPPPIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQU0</accession>
    <name>V7AQU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Replication protein A 70 kDa DNA-binding subunit B/D first OB fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G0596000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQU0"/>
    <dbReference type="STRING" id="3885.V7AQU0"/>
    <dbReference type="eggNOG" id="KOG0851">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1935380at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd04480">
        <property type="entry name" value="RPA1_DBD_A_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003871">
        <property type="entry name" value="RFA1B/D_OB_1st"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165:SF4">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02721">
        <property type="entry name" value="DUF223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Replication protein A 70 kDa DNA-binding subunit B/D first OB fold" evidence="1">
        <location>
            <begin position="5"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="113" mass="13338" checksum="3F3688B405DA50BB" modified="2014-02-19" version="1" fragment="single">MTLTHFLNDVNLSKETWNVVVRVLRLWCVQDFTKQKIPFSLEMVLQDEEGVRIHASVRRTLIYKFQNQICEDRVYSIQSFTVASNLGSYRTTKHEYKINFQYGTKVSLMANEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASB8</accession>
    <name>V7ASB8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pollen Ole e 1 allergen and extensin family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G025500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASB8"/>
    <dbReference type="SMR" id="V7ASB8"/>
    <dbReference type="STRING" id="3885.V7ASB8"/>
    <dbReference type="Gramene" id="ESW08180">
        <property type="protein sequence ID" value="ESW08180"/>
        <property type="gene ID" value="PHAVU_009G025500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWKA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KCYWRAV"/>
    <dbReference type="OrthoDB" id="1909008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039923">
        <property type="entry name" value="Protodermal_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33210:SF24">
        <property type="entry name" value="POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33210">
        <property type="entry name" value="PROTODERMAL FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01190">
        <property type="entry name" value="Pollen_Ole_e_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755880" description="Pollen Ole e 1 allergen and extensin family protein" evidence="2">
        <location>
            <begin position="25"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="151"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="317" mass="34449" checksum="831CCF0503A65EAF" modified="2014-02-19" version="1">MDLQEKLFLAALLILAAAIQETQADTMVTGTVFCDQCKDGQRSLLDYPVNGAKVTLSCADSNGQIIMSREETTNWFGSYTMRFDGAPDLSGCSAHVSGSGQGSMGCGEGAGPSQNPKLMFRMFDMEMYTVDSLLAQPSQPMQYCSRSSNPVPAPVTPPKSTPPFKLPPVPELPPLPSLPPLPSLPPLPPMIFAEASACPSEKWTMSEYKCYWRGVNRDTKVALAFGMVAARRYGTDITLWHGLQGKGDPYRTLLREGITALLNSYNSLQFSYHPIGVVEHMNLALMGSNRSVLLTALRFKRANSGAGNVTCKFTTCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASL0</accession>
    <name>V7ASL0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G1075000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASL0"/>
    <dbReference type="STRING" id="3885.V7ASL0"/>
    <dbReference type="Gramene" id="ESW07171">
        <property type="protein sequence ID" value="ESW07171"/>
        <property type="gene ID" value="PHAVU_010G1075000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1439">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="9446342at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005093">
        <property type="term" value="F:Rab GDP-dissociation inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007264">
        <property type="term" value="P:small GTPase-mediated signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.519.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018203">
        <property type="entry name" value="GDP_dissociation_inhibitor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787:SF10">
        <property type="entry name" value="GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787">
        <property type="entry name" value="RAB GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00996">
        <property type="entry name" value="GDI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54373">
        <property type="entry name" value="FAD-linked reductases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="71" mass="7701" checksum="BF1044AE08C73A98" modified="2014-02-19" version="1" fragment="single">YSQVPCCTQVEFDENGKANGVPSKGETAKCKKVVCDPSYLSDKVHKVGKVSRAICIMSHPIPQTHDSHSAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATU8</accession>
    <name>V7ATU8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sugar phosphate transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G092500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATU8"/>
    <dbReference type="SMR" id="V7ATU8"/>
    <dbReference type="STRING" id="3885.V7ATU8"/>
    <dbReference type="Gramene" id="ESW09004">
        <property type="protein sequence ID" value="ESW09004"/>
        <property type="gene ID" value="PHAVU_009G092500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1444">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTIGPQS"/>
    <dbReference type="OrthoDB" id="417037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004853">
        <property type="entry name" value="Sugar_P_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050186">
        <property type="entry name" value="TPT_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11132">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03151">
        <property type="entry name" value="TPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="196"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="322"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar phosphate transporter" evidence="6">
        <location>
            <begin position="49"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="38600" checksum="839D09F38547A1C9" modified="2014-02-19" version="1">MPLKPSYSAENLMLPVSDPPNEEDRDWLLKSENKTFRGRRIYAAVSYMLCAVLLVLFNKAVLSTYDFPSASVVTLLQMVCSCCFLYVLRRWRMVSLIAGESVIMADNSKKFVSLRTLKHTLPLSGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLAEYMLMGHRYTSSVNFSVGLIVFGAFIAGARDFSFDAYGYAIVFLSNITTAIYLATIARVGKTSGLNSFGLIWCNGIVCGPLLLIWTLVRGDLKMTLNFPYLLSPGFIVVLLFSCILAFFLNYSIFLNTTLNSAVTQTICGNVKDLFTISFGWIIFGGLPFDFWNVVGQLLGFAGSGLFAYYKLIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATW8</accession>
    <name>V7ATW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Centromere protein O</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G101000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
            <location evidence="2">Centromere</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CENP-O/MCM21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATW8"/>
    <dbReference type="SMR" id="V7ATW8"/>
    <dbReference type="STRING" id="3885.V7ATW8"/>
    <dbReference type="Gramene" id="ESW09112">
        <property type="protein sequence ID" value="ESW09112"/>
        <property type="gene ID" value="PHAVU_009G101000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0174">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRFIDHV"/>
    <dbReference type="OrthoDB" id="10050372at2759"/>
    <dbReference type="PhylomeDB" id="V7ATW8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031511">
        <property type="term" value="C:Mis6-Sim4 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd23836">
        <property type="entry name" value="DRWD-C_CENP-O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd23835">
        <property type="entry name" value="DRWD-N_CENP-O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018464">
        <property type="entry name" value="CENP-O"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14582:SF1">
        <property type="entry name" value="CENTROMERE PROTEIN O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14582">
        <property type="entry name" value="INNER KINETOCHORE SUBUNIT MAL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09496">
        <property type="entry name" value="CENP-O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0137">Centromere</keyword>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="374" mass="42155" checksum="9B234FA75388944F" modified="2014-02-19" version="1">MDQKVDLTAPHSVGTTVIGVTYNGGAVLGADSRTNTGVYGANRASDKITQLTDNVYVCRSGSNFMQDDDNRLEITRTRFGSLLKRHGDLTERLARDSDKIIFERLQKEFEAARASQTEEICLDGDAWNDGLLATIRERVHMESDRKAMHGDADILSCPHEKITYKIGNKVICCLEGARIGVQYETSYAGEPCDFYHCVLESKSFLEKMTVLEHTVPFFLPIREIENDLLSSNAMKFIDHVGDLLQAFVDRREQVRLIKELYGNQIRELYHSLPYHMIELVLDDSDCKVTVSLRYADLISVLPTRISVLGWPMFNKSTTTLNRKEDGLSGSHSTPIRLTYAEDALRTMALPEAYAEIVLNLPQALQQTYHQKAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU94</accession>
    <name>V7AU94_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G103000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU94"/>
    <dbReference type="Gramene" id="ESW09134">
        <property type="protein sequence ID" value="ESW09134"/>
        <property type="gene ID" value="PHAVU_009G103000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="90" mass="10102" checksum="3FAE09F71B811E71" modified="2014-02-19" version="1">MARICLSFTFPEALHLAIQRHCNSSLVTFPVNTLFSLNIYRYRRRERSVTGGVRVFESSSAKPMSWCDEVQEPRVVIAPDPGTCGNGLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUK9</accession>
    <name>V7AUK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Urease accessory protein UreH-like transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G119100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUK9"/>
    <dbReference type="Gramene" id="ESW09337">
        <property type="protein sequence ID" value="ESW09337"/>
        <property type="gene ID" value="PHAVU_009G119100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUR7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AENNPSH"/>
    <dbReference type="OrthoDB" id="669460at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052776">
        <property type="entry name" value="Chloro_ReproSupport/MetalTrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039447">
        <property type="entry name" value="UreH-like_TM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33876:SF4">
        <property type="entry name" value="CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33876">
        <property type="entry name" value="UNNAMED PRODUCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13386">
        <property type="entry name" value="DsbD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="195"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="227"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="308"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="352"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Urease accessory protein UreH-like transmembrane" evidence="3">
        <location>
            <begin position="206"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="376" mass="40070" checksum="8EC67B4828A565E6" modified="2014-02-19" version="1">MDWLLSSPSPSSFKTFTNSFPFQPATSRINLSPLTRSHLKRVTSICCRYENPSPFLSSTPFLPSSKHPNTFPSISSSPDRPPPDPHSLNQIKTVTFQNPKAIPARILIILSALALILIHPAIAPAAFATFQTAARTGGPAAAAVGRKLIHTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVLFGLIFLILKDKLHIEIIRTWGTRVVGLTLLIIGAMGIREASEAHTAGVALESDVNVYESLDDPTVGKKNIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLIMFLIGTVIAMGSYTVFIGSCSQALKDRVPRITEKLTWASSLIAIALGFAIIVSQFFGFSLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWH8</accession>
    <name>V7AWH8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G167800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWH8"/>
    <dbReference type="SMR" id="V7AWH8"/>
    <dbReference type="STRING" id="3885.V7AWH8"/>
    <dbReference type="Gramene" id="ESW09929">
        <property type="protein sequence ID" value="ESW09929"/>
        <property type="gene ID" value="PHAVU_009G167800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1176">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWVNIST"/>
    <dbReference type="OrthoDB" id="10253869at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016405">
        <property type="term" value="F:CoA-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05904">
        <property type="entry name" value="4CL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.30:FF:000007">
        <property type="entry name" value="4-coumarate--CoA ligase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096:SF251">
        <property type="entry name" value="4-COUMARATE--COA LIGASE-LIKE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="4">
        <location>
            <begin position="58"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding enzyme C-terminal" evidence="5">
        <location>
            <begin position="465"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW09929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="558" mass="60334" checksum="D99BEE5A78F19A46" modified="2014-02-19" version="1">MATQNQTHSHPDTTIDPNTGFCSSSRTFHSLRPNVPLPPLSQPLSLANYALSLLPATATDKSALIDATTGRHLSYSLFLRQVKSLASSIQSLTPLSKGHVALILTPTSLRVPVLYFSLLSLGVTVAPANPLSSPSELTHLIQLTKPAIAFATSAVATNVPTLKFGTVLIDSPLFLSMLDANGDSHSRAPGVEVSQSDSAAILFSSGTTGRVKGVLLSHRNLIALIGGFCHLRKILQDSDKAEPHPVSLFTLPLFHVFGFVVLVRSIAMGETLVLMQRFDFEGMLKAVERYKISMIPVPPPLVVALAKSELVNKYDLSSLRMLGCGGAPLGEQVVDDFKAKFPNVEIAQSYGLTESGGGVARTWGPEEIKHHGSVGRLSENMEAKIVDPVTGEALLPCQKGELWIRGPTIMKGYVGDEKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEEAGQIPMAFVVRKAGSNITVDQIMKFVAKQVSPYKKIRRVSFVNSIPKSPAGKILRRELVDYALSSGSSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1N3</accession>
    <name>V7B1N3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DNA-directed RNA polymerase I subunit rpa49</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G236700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPA49/POLR1E RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1N3"/>
    <dbReference type="STRING" id="3885.V7B1N3"/>
    <dbReference type="Gramene" id="ESW10773">
        <property type="protein sequence ID" value="ESW10773"/>
        <property type="gene ID" value="PHAVU_009G236700g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="532500at2759"/>
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        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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        <property type="entry name" value="RNA_pol-assoc_fac_A49-like"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="RNA_pol_I_A49"/>
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    <keyword evidence="4" id="KW-0804">Transcription</keyword>
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        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00009430"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW10773.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="426" mass="48494" checksum="286F0938225408CE" modified="2014-02-19" version="1">MDSDTEPSKSKTPKKEKNKKNKKKKDVAPQPDSIEVEVEVVREHPNITPPIVGYFPSGFDPVKNHANGHGPCDFQLYRHRNMSKRMQVVVRPPRSSVEFVGTSFSGEAAAGQRSMFALGVLDKEAGSLKIVPIAGNKVFRLEPKVKAVGAADNEPASSALEDMTPQQMFAETTAIWGTKKDIEKAKKKLALKQDENPDSQRNLDVKMRNVSVNKSALESTESHVSRNVPPYDTSATTPQEAYVLDKIILKGEWDYLEDIYCILHQEEADFSSYPTFVRNRIQRLRKIKDESEKRKHSCICSYINHLIKFKDQHSFDVFTAKGHKIPNILRHKFANMFAVSELRRLPPEKISLLVCYVLVLTLFADDFLTDCVDIAKDLGMNVMAVRKVYEQLGCKFSRQKKSWDGWCATLPVPLKFPELRERKRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2N1</accession>
    <name>V7B2N1_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G0847001g</name>
    </gene>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="17" mass="1886" checksum="CFF540DCBA60EEC1" modified="2014-02-19" version="1" fragment="single">TKFLLSICALNVYLSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2Q8</accession>
    <name>V7B2Q8_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G089500g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW12162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7B2Q8"/>
    <dbReference type="Gramene" id="ESW12162">
        <property type="protein sequence ID" value="ESW12162"/>
        <property type="gene ID" value="PHAVU_008G089500g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
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        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007005">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051114">
        <property type="entry name" value="Mito_RNA_Proc_CCM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47934:SF6">
        <property type="entry name" value="MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47934">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="185"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="220"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="257"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="292"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="327"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="362"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="397"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="514" mass="58307" checksum="C1F542CF73CC9831" modified="2014-02-19" version="1">MVRHPLSKRANKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHPFLLSTLLDAFKAYSCDPTPKAYYFVIKTLTSTSHLQDIPPVLDHLEQLETFETPEFILVYLIRFYGLSDRVQDAVDLFLRIPRFRCTPTVWSLNLVLSLLCRKRECLKMVPEILLKSQHMNIRVEESTFQVLIEALCRIKRVGYAIKMLNYMIEGGYGLDETICSLIISSLCEQEDMTSVEALVIWRDMRKLGFCPGVMDYTNMIRFLVKEGKGTDALDILNQQKKDGIKPDVVCYTMVLSGIVAEGEYVKLEELFDEILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECRPNVVTCNTLLGALCVAGDLRKARGVMKEMGWKGVGLNLHSYRIMLDGLVGKGEIGEACFLLEEMLEKCFFPRSSTFDHIIFQMCQKGLIAEAIELTKKIVAKSFVPGARAWEALLLKSGSKLGFSETTFSGLLGQINNLSCQTGSGNRSIIENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="69" xmlns="https://uniprot.org/uniprot">
    <accession>V7B360</accession>
    <name>V7B360_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">Histone-lysine N-methyltransferase ATX2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_008G018500g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B360"/>
    <dbReference type="SMR" id="V7B360"/>
    <dbReference type="STRING" id="3885.V7B360"/>
    <dbReference type="Gramene" id="ESW11303">
        <property type="protein sequence ID" value="ESW11303"/>
        <property type="gene ID" value="PHAVU_008G018500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1080">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PYIVSGF"/>
    <dbReference type="OrthoDB" id="308383at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048188">
        <property type="term" value="C:Set1C/COMPASS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042800">
        <property type="term" value="F:histone H3K4 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0040029">
        <property type="term" value="P:epigenetic regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010228">
        <property type="term" value="P:vegetative to reproductive phase transition of meristem"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd15662">
        <property type="entry name" value="ePHD_ATX1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15494">
        <property type="entry name" value="PHD_ATX1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd20142">
        <property type="entry name" value="PWWP_AtATX1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10518">
        <property type="entry name" value="SET_SETD1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd20404">
        <property type="entry name" value="Tudor_Agenet_AtEML-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.270.10:FF:000040">
        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000293">
        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041956">
        <property type="entry name" value="ATX1/2_ePHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042010">
        <property type="entry name" value="ATX1/2_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034732">
        <property type="entry name" value="EPHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002219">
        <property type="entry name" value="PKC_DAG/PE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000313">
        <property type="entry name" value="PWWP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047365">
        <property type="entry name" value="Tudor_AtPTM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF140">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13831">
        <property type="entry name" value="PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21743">
        <property type="entry name" value="PTM_DIR17_Tudor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00855">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13832">
        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00542">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00541">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00293">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63748">
        <property type="entry name" value="Tudor/PWWP/MBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50812">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50081">
        <property type="entry name" value="ZF_DAG_PE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PWWP" evidence="15">
        <location>
            <begin position="312"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="domain" description="Phorbol-ester/DAG-type" evidence="13">
        <location>
            <begin position="606"/>
            <end position="669"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="12">
        <location>
            <begin position="624"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="17">
        <location>
            <begin position="678"/>
            <end position="802"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="14">
        <location>
            <begin position="928"/>
            <end position="1046"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="16">
        <location>
            <begin position="1052"/>
            <end position="1068"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="71"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="81"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW11303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="20">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1092" mass="122694" checksum="BA06CD6D8D178EE0" modified="2014-02-19" version="1">MAAAFQEGGGGDDDATIDVHTTRGTPIRYLPLDHLYSATLPCRVTASGSSNVMSKKVKARKLTALAAHHHFNNHDHKKATSSSSSSSQPPSSKPPLLFVYSRRRKRHSPSTAPFYDSLCKTEGEVNADENENEKRLLKKRKIGSTELERLGVDLNTAIGDVDGPRLRECRNQFGNSGAAGNFKCGSLENLPKGSPDSRPVKKWIGLSFDNADPEVFIGLRCKVYWPMDLKAYTGYVRSYDKETKIHHVKYDDGDEENLILSNENIRFHVSRDEVKHLKLNFAKVRDNNVSDYDVEEMLAMAASLDDCQDFEPGDIIWAKLTGHAMWPAVVLDESLARNCKGLKMILGGRSVPVQFFGTHDFARVRVQQVKSFLSGLLTDLHSKCKKHSFIEGLEEAKRYLSEQKLPLEMIELQKRCTADNCNNVSGEDGGCTDSGDECLNGERTLMALENVETFPYVVGDLQILSLGKIVKDSAFRDGKFIWPEGYTAVRKFTSVTDPEVFAPYKMEVLRDPESKVRPLFRVTVDGGEQFNGNTPSACWSEVFKKIKKMEKNASEGTLAEGGVEKGYESGSDMFGFSNPKVLKLIKGLSKSKISSKNSFCKLGSQRHNNLPLGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNSSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSNEHSVADDRIVRVAGLCSDYEPPPNPSGCARSEPYDYFGRRGRKEPEALAAASLKRLFVENQPYIVGGYCQHGALNDPEPSGRGVCSKFFCSQQRLRTSLIDTSNNILSISEKYKYMRETFRKRLAFGKSRIHGFGIFAKHPHKGGDMVIEYTGELVRPPIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLSCYCGFPKCRGIVNDTEAEERAATLYAPRRELIDWRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B393</accession>
    <name>V7B393_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G250100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B393"/>
    <dbReference type="SMR" id="V7B393"/>
    <dbReference type="STRING" id="3885.V7B393"/>
    <dbReference type="Gramene" id="ESW10926">
        <property type="protein sequence ID" value="ESW10926"/>
        <property type="gene ID" value="PHAVU_009G250100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
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        <property type="component" value="Chromosome 9"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:antiporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="301"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="343"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="425"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="451"/>
            <end position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW10926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="514" mass="55834" checksum="D39038AF54668B18" modified="2014-02-19" version="1">MFKMVAEEKPQKTYPTTAQVVDELKRMGDIGVPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGFSVLSGLAMGMEPLCTQAFGSRNFCLLSLTLQRTIFMLLAASLPISLLWLKLEPLMLWLHQNPEITTVASLYCRFSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTLLSILIHIPVVTFFTFKLHLGVPGIAMSAFVANFNTLFFLLSYMLYMQVSKGSLSMPLLISRTSAISATTTTTATATATTATTSWGILIRFSIQSCLGVCLEWWWYEFMTILAGYLHNPRVALATAGIVIQTTSLMYTLPTALSGSVSTRVGNELGAGQPERARLSSIVAIGMALSSSILGLLGTTLGRERWGRVFTSDSEVLELTMSVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVMAFVWRLGLVGLCYGLLAAQIACVVSILVVVYNTDWERESLKAKTLVSCHTMEHGDQTLVKCEEGLVFLNHKNISQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3E6</accession>
    <name>V7B3E6_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G104300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="100" mass="11395" checksum="8B70ED6B64BDD5CC" modified="2014-02-19" version="1">MKVSSFFWNVRGLRNHKTVEMLISLLKLHKPLLFFLAQPMVVYNDAFEVLFKSVNMHLAATSPITNKASKLWCLSIPNLVFMELTHTWLDGFCGGILVPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3N8</accession>
    <name>V7B3N8_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G088600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Streptophyta</taxon>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW12150"/>
        <property type="gene ID" value="PHAVU_008G088600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="138" mass="15260" checksum="7C5F77148C01F345" modified="2014-02-19" version="1">MFAFPKGGCTYIFRHMVFNENASPFSTNAKFFLQHNSNSPMLSSTPFPLTMFKVVFATLDKTPDIPVTTQSLSSPIPNFVALSNLPVTTPTTTFDATTSSSPSHNVHPMVTHAKSFMFKPKPYNVSVSDNYIEPATFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B456</accession>
    <name>V7B456_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G131700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B456"/>
    <dbReference type="Gramene" id="ESW12662">
        <property type="protein sequence ID" value="ESW12662"/>
        <property type="gene ID" value="PHAVU_008G131700g"/>
    </dbReference>
    <dbReference type="OMA" id="ICEAKIT"/>
    <dbReference type="OrthoDB" id="1938697at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="11997" checksum="6C6F860391EAF595" modified="2014-02-19" version="1" fragment="single">REDLNIHCKSKDDDLGPHVLHINQYFRITFQPNFFFGTLFFCSFQWGNGPLFHFDVYDQNTDYYKCDADCKWYVHKNGPCRNELQDNSSYVHKCYPWKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7B490</accession>
    <name>V7B490_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G049400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B490"/>
    <dbReference type="SMR" id="V7B490"/>
    <dbReference type="STRING" id="3885.V7B490"/>
    <dbReference type="Gramene" id="ESW11668">
        <property type="protein sequence ID" value="ESW11668"/>
        <property type="gene ID" value="PHAVU_008G049400g"/>
    </dbReference>
    <dbReference type="OMA" id="DKMTIMV"/>
    <dbReference type="OrthoDB" id="1435679at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="164"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="217"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="30736" checksum="71FE35591BC788AA" modified="2014-02-19" version="1">MLRSFLQFISNAKVKMKTTPEKHNNTNILPNKALDQIERETLSEEHNPNALQEEKLDLVKAARKPPPKTPARKPPPEKPPRNPPSISFMDCIISIVLSIEDIPFNFHYMLLVSGGAFLKFKAEKLSAQFDFKLGNLSNTTLLLSFGEAFGEFNPEITDKMTIMVGYLLVLLLIWPLQPVYQISIMLILISESLHYILKLLGKLSGVDVTCGIFKLPLLLFTTSAAFALSLIVCLVMFLVIYLIQRYVGAGRSKGREPDFTLEDFSVIVEGGFMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B649</accession>
    <name>V7B649_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G182300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B649"/>
    <dbReference type="SMR" id="V7B649"/>
    <dbReference type="STRING" id="3885.V7B649"/>
    <dbReference type="Gramene" id="ESW13269">
        <property type="protein sequence ID" value="ESW13269"/>
        <property type="gene ID" value="PHAVU_008G182300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQYP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MACNETQ"/>
    <dbReference type="OrthoDB" id="1862401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF259">
        <property type="entry name" value="PROTEIN ECERIFERUM 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="186"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW13269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="437" mass="48456" checksum="DAA35D4EDD87754B" modified="2014-02-19" version="1">MEETQPPTCSRISTVVPATPRGEEHREWHLSSMDLLLKLHYIRALYFFVNHAAQGLSVYDLKKPMFPLLDHVTHLSGRIRISESGRPFIKCNDAGVRIAESHCHLTLREWLHQNGSSLHHALLPDHVLGPDLGFSPLVFVKFTWFKCGGISVGLSWSHVLGDAFSAFNFIAKWSRMLAGHAPPKTLHVTSHKQTQSPPHNNENDGSPISVKMATTVEDLWLATNQTKMVTHTFHVSPNQLNHLVTSMFTCDQNQATKTSYFEILSALVWKHVARIRHLEPKIVTILTRGSDSDGFSSNNVVISVVEANVAVGKSDVADLAKLIGEEKRVENNVVEELVEGKEGKENLVVYGARLTFVDLEEDDIYEVLLNGQKPMVVNCGIGGVGDDGVVLVLPGSQGEEDGGRGGRMVTVTLPEKEVEQLKEKLREEWGDIDSLAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6F9</accession>
    <name>V7B6F9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF3527 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G112600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6F9"/>
    <dbReference type="STRING" id="3885.V7B6F9"/>
    <dbReference type="Gramene" id="ESW12438">
        <property type="protein sequence ID" value="ESW12438"/>
        <property type="gene ID" value="PHAVU_008G112600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSE4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQCAFSN"/>
    <dbReference type="OrthoDB" id="1898655at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021916">
        <property type="entry name" value="DUF3527"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31390:SF27">
        <property type="entry name" value="DUF3527 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31390">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12043">
        <property type="entry name" value="DUF3527"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="121"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="239"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="361"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="474"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="920"/>
            <end position="941"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="129"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="193"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="250"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="263"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="277"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="931"/>
            <end position="941"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="941" mass="104308" checksum="6CADD344CB969785" modified="2014-02-19" version="1">MGFGLTLRKKSSKQQSRSESAKDGSNLLQPNPSPKDSLKLKSKIIVGQASSDSGYKAKHNVVRKVQHLDSAKGSSTPPDELVKYMSSLPEFLKRSDGGESIQGKALNVGVLDWSKLEKWKNKQTHTKAEASNFTSFNSSEEASSTAATTSSTISVGHNKKLDGKKGLSSSRSKGPYKEDLGMSSKMSSQNVKQDQHSEIKTKTIGDELGMSPSEFGKTQSVTSLQRVKVNDYDEITSVVGSSASKSWHHGVSVVSNENSSGRNVEDDKRMEGLHPQSLKKKERNRKSSSDKGFSSLESKNKGVSFRSQKKMSSGGSELKNKMDQWQESDIDAGHKQSHRMPSNIVLLRPRRVLQLKSEDYFQHSQSRTSSDEDLGESSRSSVSYMSIPEEIYTEDLHSEIPHSKLLPSVAELVSSERLQQSNNTNLDIGRSSGVHKKASCSNNTSSLKSEYTCIEKDVLDIKLKNQCAFSNSLEPRDHGIPEPTPVNPSSNRRLSVSLSRIGRSFSFKEGSIPKLSSVYVSSKSGSVTPESSACLENHSKYKVKGHNRTRSSPLLRLLDPILKHKTSSIHLSDEHSVTSKGSIDSISLRTISLPEGKSKKESSFQALLQLTIRNGVPLFKFVINSERKVLAATTKSLALEEKDDLDCYFTFYLVNEIKKKSSKWMSHWSKEKSCGYAYNIVGKMRVSNSKIDESNNENSKRERVVKEYVLMGVEVDQVDRETSQFFMSKELAAVVIEIPCENINHEELLYSHNLPRKICLKCLADEKCFCSAQENDIYGSIKVILPGGLHSSPNTGEPSPLIQRWKLGGLCDCGGWDVGCKLLVLSNQNISSNIPRSSKSYLERFHLFVQEGAEGNTPLFTLLPLKDGFYSVEYSSTINHLQAFFISLVVLGNQKLPSSLEMNNIQEAIDKEFSSKNNNELQGKAPSYYNPIPPYSPAGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6W8</accession>
    <name>V7B6W8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G186500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6W8"/>
    <dbReference type="Gramene" id="ESW13320">
        <property type="protein sequence ID" value="ESW13320"/>
        <property type="gene ID" value="PHAVU_008G186500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS0Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHVETHM"/>
    <dbReference type="OrthoDB" id="1930285at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:1900150">
        <property type="term" value="P:regulation of defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040244">
        <property type="entry name" value="EDR4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055126">
        <property type="entry name" value="EDR4-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021480">
        <property type="entry name" value="Zinc_ribbon_12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31105:SF48">
        <property type="entry name" value="DUF3133 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31105">
        <property type="entry name" value="EXTRA-LARGE G-PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22910">
        <property type="entry name" value="EDR4-like_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11331">
        <property type="entry name" value="Zn_ribbon_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Enhanced disease resistance 4-like N-terminal" evidence="3">
        <location>
            <begin position="10"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="Probable zinc-ribbon" evidence="2">
        <location>
            <begin position="982"/>
            <end position="1026"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="195"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="703"/>
            <end position="772"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1043"/>
            <end position="1176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="135"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="168"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="220"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="704"/>
            <end position="753"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="760"/>
            <end position="772"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1124"/>
            <end position="1145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1154"/>
            <end position="1170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF22910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1176" mass="128768" checksum="58C59651ED78DD63" modified="2014-02-19" version="1">MSGESAPKPKPRLVLCPKCWQLLQESPNYDVYKCGGCGTTLQAKKRRSNAVKSESSTHETDAAPRNEVHHPKADDKQYNNEEKLLRYQENGVRKKLTSSSSGKCSLDGPDGRGQIENGEGNREQLVASPVNGFNEKTSSSSGECSLSENGGRDQIEDSECNGKELITSQENGFGGKASSSSSRECSLVGNGGRFRIEGGECDGEQPVIPQENGLSEKEASSSSRDCSLNGNAGRNEIEDIKYNGEQPVVSPENGLSEKASSSSLRECSLNGNGGRNQIGDSKYDGEQPVISQENGLREKAASSCSGECSLNGNGGGNQIDDGKFNGEQTVNFQENGLMEKASGSSLGECSLDGKDQSENGEPSGEWIEHFNLPDDQLETEMDIYKLSDMRRQAVSNSGFSDELTRFDNEASAELTAECSVENAKNTNLLLEGEELSNGKVPLEGAGEQLISALAKEDADDEKSASVQVKSVVDIIGNDLQVVQELNNGNLIPEGPEQELFSGSDGEAVNNDKLALFGANPKVVINGSSEAKSEELHDGNLLLEVTEEELNVSALNGEDLKHPQSDLLGAKSEVDNAGNTSTAERLSTEEGSISCAYPCELEKGTFGNHSSFKTIAHSSDGEIFDNTEVINPGFETSGTLGRLSKSSTTRSYHAYDGSVSSNDGVDEQFPNQYLDSFENTYTVANGVFEGGSRKGKDIVNSMLHGDPETRNRSYFREGRPCVPRDSRRNVNDEVPETTRHDHAHWMRTKRDEFPPRLPHHGSGSQSGYESGSTSNQMIDEFYCGSSYLSHDSFDDPDQEKMKLLRLVYKLQDQLNRTGYGSGEMNGRLSMGSHISAYQSHDHYDRRFYHGLDYPRCDGICSSHGMNWCQKHNFSRAPYSTEPTCSIHHVDPSCFNCSPQRWQHSAELPPRDLYQHEELCRPNAGHTCCSPHHSYPVSPQWSMTSNHLAHAHERMSCDQMYRPEVKKHFREKPILSRRHYRPVAGGAPFVTCNKCLKLLQLPADFLLFKRVFHQLKCGACQEVLKFSLQNKSHIVSYASNALESPNEVIHDSNPPSESRANYYHSPHADHASYSDDYGNSVGKSYSSEGDPMSATLLDPLHGSEYDKPTVSSGTLETITEKEKTANPGTSKASVETDESTMNSSNISPEIEAHLQPKSSPLHQLMGYSSPSQVVRGIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B963</accession>
    <name>V7B963_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">B box-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G254400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B963"/>
    <dbReference type="SMR" id="V7B963"/>
    <dbReference type="STRING" id="3885.V7B963"/>
    <dbReference type="Gramene" id="ESW14115">
        <property type="protein sequence ID" value="ESW14115"/>
        <property type="gene ID" value="PHAVU_008G254400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZSP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFRRRIC"/>
    <dbReference type="OrthoDB" id="153872at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19821">
        <property type="entry name" value="Bbox1_BBX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049808">
        <property type="entry name" value="CONSTANS-like_Bbox1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31717:SF81">
        <property type="entry name" value="B-BOX ZINC FINGER PROTEIN 32-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31717">
        <property type="entry name" value="ZINC FINGER PROTEIN CONSTANS-LIKE 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00336">
        <property type="entry name" value="BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW14115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="251" mass="27179" checksum="628883056E41E16C" modified="2014-02-19" version="1">MGKACELCSNRASFYCPSDSAFLCCDCDAAVHAANFLVARHFRRRICSECNRFTGIHISGAALPSTCTSCSPEKPPSDDVDSLPSSSTCVSTSESCAAEKIKATRAAAGKKRRRSFWSSVIDDASQEAKKKRNSVGSVELEQEQEEVFGKWSREIGLGLGLGLGENGNRVASHALNVCLGKWNLLPFRVAAATSLWQGLRFCGDRSLATWQNLARLEKISGVPANLILAAHANLARVFTLPRELHEGWGES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC94</accession>
    <name>V7BC94_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">poly(ADP-ribose) glycohydrolase</fullName>
            <ecNumber evidence="2">3.2.1.143</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G074100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the poly(ADP-ribose) glycohydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.143" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC94"/>
    <dbReference type="SMR" id="V7BC94"/>
    <dbReference type="STRING" id="3885.V7BC94"/>
    <dbReference type="Gramene" id="ESW15459">
        <property type="protein sequence ID" value="ESW15459"/>
        <property type="gene ID" value="PHAVU_007G074100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2064">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IQCIIHY"/>
    <dbReference type="OrthoDB" id="1937899at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004649">
        <property type="term" value="F:poly(ADP-ribose) glycohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990966">
        <property type="term" value="P:ATP generation from poly-ADP-D-ribose"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009225">
        <property type="term" value="P:nucleotide-sugar metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006282">
        <property type="term" value="P:regulation of DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046372">
        <property type="entry name" value="PARG_cat_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048362">
        <property type="entry name" value="PARG_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007724">
        <property type="entry name" value="Poly_GlycHdrlase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12837">
        <property type="entry name" value="POLY ADP-RIBOSE GLYCOHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12837:SF0">
        <property type="entry name" value="POLY(ADP-RIBOSE) GLYCOHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05028">
        <property type="entry name" value="PARG_cat_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20811">
        <property type="entry name" value="PARG_cat_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PARG helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="PARG catalytic Macro" evidence="5">
        <location>
            <begin position="232"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR607724-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF20811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="540" mass="61268" checksum="4B469D0A15E8E1CE" modified="2014-02-19" version="1">MEESEELRSILPYLPLHMRSSSLFWPSQAVETLRELGGGRLHSGHLLFQEISHLRNALSLSSKPLSPSTSLGYAHFFDEVMSGEESRKWFQEVVPVLANLLLRLPSLLETHYQNPHNAIFTTTALRLLDSQQPGIIFLSQELIAALLCCSFFCVFPVKDRHVKHLPMINFDKLFSTLYENYSQKQENKIWCIIHYFQRISAKMPKGIVSFERKVLHLKNDSTPISCPDANFLSTSSVPLCRFEVHSSGLIEDQSSEVVEVDFADKYLGGGALGWGCVQEEIRFMVCPELIAGMLFLPAMADNEAIEVVGVERFSSYTGYASSFRFSGDYVDEREVDTLGRRKTTIVAIDALRSPGMRQYRANFLLREINKAFCGFLYQCKYQLYQKKLQENGCSFALFEAATSTSMETSEGKFSNHETTNSQDDYHRMDQGNNIGVATGNWGCGVFKGDPEVKTIIQWLAVSQARRPFIAYYTFGLKALQSLDEVANCILSERWTVGDLWNMLVEYSTSRSKGETNVSFFQWLLPSIYGHGSNAINIWPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCP6</accession>
    <name>V7BCP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G086600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCP6"/>
    <dbReference type="SMR" id="V7BCP6"/>
    <dbReference type="STRING" id="3885.V7BCP6"/>
    <dbReference type="Gramene" id="ESW15609">
        <property type="protein sequence ID" value="ESW15609"/>
        <property type="gene ID" value="PHAVU_007G086600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S250">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TNFYYPF"/>
    <dbReference type="OrthoDB" id="780830at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677">
        <property type="entry name" value="AP2 DOMAIN CLASS TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677:SF87">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="7">
        <location>
            <begin position="29"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="148" mass="16521" checksum="73D0C57486F75287" modified="2014-02-19" version="1">MSQTENPMENLPALIYKNPIRRSSRRSTMYLGVRKRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAIAYDLSSIKICGINARTNFHYPFVSLPPPPMALPPPPLPPTQELDQSVGVCPEMNAAFDGDDESLVIASILQSFSSSGNCSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDA7</accession>
    <name>V7BDA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Cytochrome c oxidase assembly protein COX15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G282700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>Fe(II)-heme o + 2 A + H2O = Fe(II)-heme a + 2 AH2</text>
            <dbReference type="Rhea" id="RHEA:63388"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:61715"/>
            <dbReference type="EC" id="1.17.99.9"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:63389"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Porphyrin-containing compound metabolism; heme A biosynthesis; heme A from heme O: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDA7"/>
    <dbReference type="SMR" id="V7BDA7"/>
    <dbReference type="STRING" id="3885.V7BDA7"/>
    <dbReference type="Gramene" id="ESW14456">
        <property type="protein sequence ID" value="ESW14456"/>
        <property type="gene ID" value="PHAVU_008G282700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFVCYSW"/>
    <dbReference type="OrthoDB" id="1726137at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120547">
        <property type="term" value="F:heme A synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016653">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006784">
        <property type="term" value="P:heme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01665">
        <property type="entry name" value="HemeA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003780">
        <property type="entry name" value="COX15/CtaA_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023754">
        <property type="entry name" value="HemeA_Synthase_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23289">
        <property type="entry name" value="CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23289:SF2">
        <property type="entry name" value="CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02628">
        <property type="entry name" value="COX15-CtaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="254"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="298"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="361"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="391"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="420"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00044501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW14456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="458" mass="50794" checksum="ADB3C2CFBCA3C2FE" modified="2014-02-19" version="1">MFGRGRVWSVLRRGKEAIGIPKLRGTTTSFSSSTQPPPFKFLTPPVATHYIHAFRSHLIPKGHHVHVSHARNFSKMVAAGAQHKEEGLKLLVSGGSHAQKVVGMWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPLSDEEWLKEFDKYKESPEYKRVNRGMQIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVLPEPPTESLTWVRGAAKVRRLALPISMLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFVMKPLIRNFFENTSTVQLDHRILATATLISVGILWWSTRKLDIHPAIRSAIGGTVGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPSLSLLKTLPQVIKAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDI5</accession>
    <name>V7BDI5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G111700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDI5"/>
    <dbReference type="STRING" id="3885.V7BDI5"/>
    <dbReference type="Gramene" id="ESW15894">
        <property type="protein sequence ID" value="ESW15894"/>
        <property type="gene ID" value="PHAVU_007G111700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SA1A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAMPEHK"/>
    <dbReference type="OrthoDB" id="1110706at2759"/>
    <dbReference type="PhylomeDB" id="V7BDI5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36595">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36595:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16731" checksum="329F12F70A33675A" modified="2014-02-19" version="1">MLDSLMEYITQAASSYAFIFCFCNLIIVIILVDLKPKLSFNQGSEEIPLSLITNKGIEAAKSKCLVSKSTLTPQAREVAHVKEEVVVDRVEMEGKDNCNCNSTEEDDELRRRVEEFIERVNEGWKAEHFNSSSLLWGENNNNKELLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDR2</accession>
    <name>V7BDR2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">S-methyl-5-thioribose kinase</fullName>
            <ecNumber evidence="3">2.7.1.100</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G040800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the methylthioribose kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.100" evidence="3"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDR2"/>
    <dbReference type="SMR" id="V7BDR2"/>
    <dbReference type="STRING" id="3885.V7BDR2"/>
    <dbReference type="Gramene" id="ESW15058">
        <property type="protein sequence ID" value="ESW15058"/>
        <property type="gene ID" value="PHAVU_007G040800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVM3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMCEITE"/>
    <dbReference type="OrthoDB" id="2461at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046522">
        <property type="term" value="F:S-methyl-5-thioribose kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009212">
        <property type="entry name" value="Methylthioribose_kinase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01767">
        <property type="entry name" value="MTRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34273">
        <property type="entry name" value="METHYLTHIORIBOSE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34273:SF2">
        <property type="entry name" value="METHYLTHIORIBOSE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031134">
        <property type="entry name" value="MTRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminoglycoside phosphotransferase" evidence="8">
        <location>
            <begin position="37"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="417" mass="47731" checksum="4711AF9C2BF930DC" modified="2014-02-19" version="1">MAFSEFRPLNEKSLIEYIKSVPALSSKLANNFDDLSVKEVGDGNLNFVYIVSNSAGSFVIKQALPYVRCIGESWPMTKERAYFESLTLKEEGRLCPEHVPEVYHFDRTMSLIAMRYLEPPHIILRKGLIAGTEYPLLAEHMADFMAKTLFFTSLLFRSTTDHKRDVAEFCGNVELCRLTEQVVFSDPYKISEYNRWTAPYLDRDAEAVREDNLLKLEVAELKSVFIERAQALLHGDLHTGSVMVTRESTQVIDPEFSFYGPMGFDVGAFLGNLILAFFAQDGHADQTNDRKAYKEWILKTIEDTWNLFQHKFTSLWDEHRNGAGEAYLPAIYNNPEVQLLVQKKYMTNLFHDSLGFGAAKMIRRIVGVAHVEDFESIADAAKRATCERRALDLAKMLLKERRKFEGIAEIISAIREY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEU7</accession>
    <name>V7BEU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G128400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEU7"/>
    <dbReference type="SMR" id="V7BEU7"/>
    <dbReference type="STRING" id="3885.V7BEU7"/>
    <dbReference type="Gramene" id="ESW16090">
        <property type="protein sequence ID" value="ESW16090"/>
        <property type="gene ID" value="PHAVU_007G128400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1745717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd00030">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044511">
        <property type="entry name" value="At1g03370/At5g50170-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46296">
        <property type="entry name" value="BNAA05G37250D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46296:SF6">
        <property type="entry name" value="C2 AND GRAM DOMAIN PLANT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="108" mass="12278" checksum="5592FFC3C57DFD27" modified="2014-02-19" version="1">MIETGVDKVLSHVAKPESDWKLAMYGLSGPYVVFTCNGKIRTSSIKFQKSNPIWNEIFEFDVMDDPPSVMDVVVCEFDGPFNDSESMNSNEKVDEIKVKLDFDLIYSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFQ3</accession>
    <name>V7BFQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Aquaporin NIP7-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G178300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MIP/aquaporin (TC 1.A.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFQ3"/>
    <dbReference type="SMR" id="V7BFQ3"/>
    <dbReference type="STRING" id="3885.V7BFQ3"/>
    <dbReference type="Gramene" id="ESW16699">
        <property type="protein sequence ID" value="ESW16699"/>
        <property type="gene ID" value="PHAVU_007G178300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0223">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GAGVECQ"/>
    <dbReference type="OrthoDB" id="3222at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="entry name" value="Glycerol uptake facilitator protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034294">
        <property type="entry name" value="Aquaporin_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022357">
        <property type="entry name" value="MIP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45724">
        <property type="entry name" value="AQUAPORIN NIP2-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45724:SF26">
        <property type="entry name" value="AQUAPORIN NIP7-1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="Aquaporin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00221">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="140"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="248"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="10"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="297" mass="31462" checksum="6000F3297D97F401" modified="2014-02-19" version="1">MTDIFENHPSPDSSNYASSSGFSVDDKDIGYRAATSTHTYLLDNKSVLHFFSIKIDLNYARMAMAEMVGTFILMFCVCGISASTQFQKGAVGLPEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQIVGSMSATYIGCLVYGIKSDAIMTMPLQGCTSAFWVELIATFIIMFLVAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSTTLSSPNISAAAGRPIPFCSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHT9</accession>
    <name>V7BHT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G209000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7BHT9"/>
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        <property type="protein sequence ID" value="ESW17085"/>
        <property type="gene ID" value="PHAVU_007G209000g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
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        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="probable WRKY transcription factor 31"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="WRKY domain"/>
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        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 36-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429:SF59">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 47-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="7">
        <location>
            <begin position="232"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="18"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="175"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="436"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="26"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="83"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
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            <begin position="178"/>
            <end position="193"/>
        </location>
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    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="197"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="436"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="462" mass="50886" checksum="D5D6AC7A22811F88" modified="2014-02-19" version="1">MENHHQMQQHRHQFMNLDPTTVNTGQHHDPSVKELDFFSSTSPSKNTHTDNSNTHSNIPKENGSQPLFTDQFINTTLNLMCPSQTDELSRSTPTDQDPKSPPLNTLEKEFLRLQEENYKLKTMLDQITKNYHHLQFFLAMQKQKPYQNGEKNDNMSGQHLLDPLSCTKLDANVAASVSDDKSGQEAHHDRVEDVVEQSSSQSLGSSKCPKFEESKPSETPFRRARVSVRARSEAPVICDGCQWRKYGQKISKGNPCPRAYYRCTMAVGCPVRKQVQRCTEDMSVLITTYEGNHNHPLPPSATVMANSTSAAAAMLLSSSSGSIASNEALNNSVGVFSSMPYIPMPTFSASAPFPTITLDMTTNPTQLHRDTSLPLLATTFPHLLGHPIFFPHKIQHSLGQRQPSFMTDVMTAAVASNPNFTVALAAAISSILGASRGNDGNNNNSNGRNVLALGTSMLPEST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIM4</accession>
    <name>V7BIM4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G263500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7BIM4"/>
    <dbReference type="Gramene" id="ESW17732">
        <property type="protein sequence ID" value="ESW17732"/>
        <property type="gene ID" value="PHAVU_007G263500g"/>
    </dbReference>
    <dbReference type="OMA" id="YFDYAND"/>
    <dbReference type="OrthoDB" id="756060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
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        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR018487">
        <property type="entry name" value="Hemopexin-like_repeat"/>
    </dbReference>
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        <property type="entry name" value="HX"/>
        <property type="match status" value="3"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51642">
        <property type="entry name" value="HEMOPEXIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="134"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="187"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="270" mass="31066" checksum="B5B3D68BC42CD715" modified="2014-02-19" version="1">MGMNPDAAFDVYDYLSDEPEVSTYIDSAFRSSSTNEVYFFLQEKYMRLYYTPGQPTQTDDKILRDLDWICYDFPSLEHSSFAAYGIKCSFDTEGYKAYLFSECYCVYFDYANDKILSFCAIDVMFPVLENTVFENDIDSAFRSSRGKEVYLFKGNKYGCLDYDSKQLIGPIRNITNGFPVLKGTIFEDGIDACFASHKENEAYLFKGENYVLINFIDDTLVDDVKPIIDGWSSLRGILPLGNPVDDGYPHKVGTNRYRYRTIEDADDEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJZ5</accession>
    <name>V7BJZ5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G1932001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJZ5"/>
    <dbReference type="Gramene" id="ESW16896">
        <property type="protein sequence ID" value="ESW16896"/>
        <property type="gene ID" value="PHAVU_007G1932001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="46" mass="5499" checksum="39E14151BC5C73A9" modified="2014-02-19" version="1" fragment="single">AKSFSYLCRAFIFFFLSPSSPIHDQEDLHFSHCLMTIERFLVFLQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK85</accession>
    <name>V7BK85_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sugar phosphate transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G038200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK85"/>
    <dbReference type="SMR" id="V7BK85"/>
    <dbReference type="STRING" id="3885.V7BK85"/>
    <dbReference type="Gramene" id="ESW18404">
        <property type="protein sequence ID" value="ESW18404"/>
        <property type="gene ID" value="PHAVU_006G038200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1443">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AHLMGDQ"/>
    <dbReference type="OrthoDB" id="18894at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004853">
        <property type="entry name" value="Sugar_P_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050186">
        <property type="entry name" value="TPT_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11132">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03151">
        <property type="entry name" value="TPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="190"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="285"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="310"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="350"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="389"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="415"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="442"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar phosphate transporter" evidence="6">
        <location>
            <begin position="160"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="500" mass="56652" checksum="8D978A7C82F4D1C9" modified="2014-02-19" version="1">MVQSELDSENGDFTEVDDVVSESLGPSIRRELSFSRWCEDDDERIRLDQQLGNEDVSLEEDSDFALPIPQKNELQSRALDRERFFHQKFRQRSMQTNGIDTMDDDFVHRRGNGSEKYASFDIEDKSERGTSDVDSYISVGDDESLDKSSQNPIHLANILKTLFLILMWYTFSLFLTLYNKSLLGDHMGKFPAPFLMNTIHFTMQAVLSKFITWFWSHRFETNVVISWRDYFLRVVPTAFGTAMDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFRLETPSLKLSGIILVISVGILLTVSKETEFDFWGFVLVMLAAVMSGFRWCMTQILLQKEAYGLKNPLTLMSYVTPVMAVATALLSLALDPWDEFQENKYFDNSVHITRSCLLMLLGGTIAFFMVLTEYVLVSVTSAVTVTIAGVVKEAVTILVAVLYFHDQFTWLKGFGLLTIMIGVSLFNWYKYLKLQKGQASGSDVAEPSGDAAAKYVILEEMEEQEDSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKA3</accession>
    <name>V7BKA3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G241700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKA3"/>
    <dbReference type="STRING" id="3885.V7BKA3"/>
    <dbReference type="Gramene" id="ESW17463">
        <property type="protein sequence ID" value="ESW17463"/>
        <property type="gene ID" value="PHAVU_007G241700g"/>
    </dbReference>
    <dbReference type="OMA" id="CMGAHTI"/>
    <dbReference type="OrthoDB" id="696485at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW17463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="105" mass="12326" checksum="E6B988B27BC35CBE" modified="2014-02-19" version="1">MCLTWLGFPLVLDCDAQMHFRMFKPFGLNHAVTKCWGGIWVGFVSEIWNHRNKVVFENGRVDLVEVFTVAQRKTWSWVTVKEKSAAFSYSDWCLDPICCMRYLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLS3</accession>
    <name>V7BLS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC1 atypical kinase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G004300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. ADCK protein kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLS3"/>
    <dbReference type="SMR" id="V7BLS3"/>
    <dbReference type="STRING" id="3885.V7BLS3"/>
    <dbReference type="Gramene" id="ESW17990">
        <property type="protein sequence ID" value="ESW17990"/>
        <property type="gene ID" value="PHAVU_006G004300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1235">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMFDQLF"/>
    <dbReference type="OrthoDB" id="427480at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046467">
        <property type="term" value="P:membrane lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901031">
        <property type="term" value="P:regulation of response to reactive oxygen species"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05121">
        <property type="entry name" value="ABC1_ADCK3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050154">
        <property type="entry name" value="UbiB_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10566">
        <property type="entry name" value="CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10566:SF113">
        <property type="entry name" value="PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 7, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC1 atypical kinase-like" evidence="3">
        <location>
            <begin position="239"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="44"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="708" mass="80562" checksum="1091833BE6C23644" modified="2014-02-19" version="1">MAVIMALHGYCYSNIKLGNQRRALHNLSFPGSISVHKLPKNRRSKSDKSENDKSPRFLVEMRQTELPPSKYGTNGRVVKMVPASEVVKRKTMSENKVEMGSSSKKAVNGASLVRRDPSPALTKTVKSRTSKELPPLEELKVLPSDEGFSWANENYNSVQRSIDVWSFVISLRIRVLLDNGKWAYLGGFTEEKQKRRRQKTAAWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPKKARGFIESELGAPINVLFKEFEDRPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLRNLKLIAEYFQRSETLGGPTRDWVGIYEECATILYQEIDYINEGKNADRFRRDFRNIKWVRVPLVYWDYTASKVLTLEYVPGIKINEVDMLTSRAYDRLRISSRTIEAYLIQILKTGFFHADPHPGNLAVDVDEAIIYYDFGMMGDIKSFTRERLLELFYAVYEKDAKKVMQCLIDLGALQPTGDLSSVRRSVQFFLDNLLSQTPDQQQTLSAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGLGYILNPDFSFVKIAAPYAQELLDIRQKQRTGPQLVEEIRKQADDVRTNSITMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATILQMATMYSVLGGTLLNLGITLSSQGNQAFANGSFLGAGVFAALLLRSMQRVKKLEKFEKMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMS4</accession>
    <name>V7BMS4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pierisin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G276400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMS4"/>
    <dbReference type="Gramene" id="ESW17881">
        <property type="protein sequence ID" value="ESW17881"/>
        <property type="gene ID" value="PHAVU_007G276400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="6845681at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.210.10">
        <property type="entry name" value="Heat-Labile Enterotoxin, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.110.10.10">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036375">
        <property type="entry name" value="Hemopexin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018487">
        <property type="entry name" value="Hemopexin-like_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054695">
        <property type="entry name" value="Pierisin-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22596">
        <property type="entry name" value="Scabin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00120">
        <property type="entry name" value="HX"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50923">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51642">
        <property type="entry name" value="HEMOPEXIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pierisin-like" evidence="3">
        <location>
            <begin position="109"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="355"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="408"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="469"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF22596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="55799" checksum="BFF84E9A6C27E740" modified="2014-02-19" version="1">MSIPPPNDPSRGSSEFSQPLRMVDFVEALELLNNINRVNVVEGNLTGIEYRTGDQELDIRRPVYRQTPNSTYYDLHHFIEHAGAPLDSNRPPTTTHSSHPALRSNFIIMKFMLLVVFGIWVALSLNSYPYISQAEVCFVGGIASQYIRSCLIFTATREAGARFPRLQRETRLVINRNFNPVSFPYLEVVVHMPVYYYRDDNGVNRYLPEETYPPRREKREVLSADEDAALKWYTSSVLEIPSYINSALRSSRTNEVYFFLKNKYVRVYYTPGQTDDKILTDLRWIYDGFPSLVDTPFGEYGIDCVFDTEGNEAYIFCTKLCAYIDYAPGTMNDKILSGPTTIAEMFPVLKNTVFENGIDSAFRSTKGKEVYLFKGNKYGRIMYDSKQLVGTIRNITDGFPVLKGTIFENGIDACFASHKENQAYLFKGENYVRIIFTPGTTDDTLVGDVKSIFNGWPLLRGILPLDNKGVDAHPQSDHEEPYPDQHDEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN07</accession>
    <name>V7BN07_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ras-related protein RABA3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G115500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN07"/>
    <dbReference type="SMR" id="V7BN07"/>
    <dbReference type="STRING" id="3885.V7BN07"/>
    <dbReference type="Gramene" id="ESW19332">
        <property type="protein sequence ID" value="ESW19332"/>
        <property type="gene ID" value="PHAVU_006G115500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAFETMF"/>
    <dbReference type="OrthoDB" id="1864332at2759"/>
    <dbReference type="PhylomeDB" id="V7BN07"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01868">
        <property type="entry name" value="Rab11_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001217">
        <property type="entry name" value="Ras-related protein RABA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050209">
        <property type="entry name" value="Rab_GTPases_membrane_traffic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47979">
        <property type="entry name" value="DRAB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="236" mass="26344" checksum="2B26F4649960781A" modified="2014-02-19" version="1">MNQEMNGFETERVKETMHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINSKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSVVIMLIGNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVETAFFKLLEQIHRVVSKRSLESGKGKATRHNNVATLQGSKLDVISGAELEISEMKNLSSCSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNU6</accession>
    <name>V7BNU6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G064600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNU6"/>
    <dbReference type="SMR" id="V7BNU6"/>
    <dbReference type="Gramene" id="ESW18720">
        <property type="protein sequence ID" value="ESW18720"/>
        <property type="gene ID" value="PHAVU_006G064600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KCIPGRT"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000010">
        <property type="entry name" value="Transcriptional activator Myb isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050560">
        <property type="entry name" value="MYB_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614">
        <property type="entry name" value="MYB PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614:SF218">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB119-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13921">
        <property type="entry name" value="Myb_DNA-bind_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="130"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="135"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="182"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="186"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW18720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="436" mass="49115" checksum="720E139E600ECE14" modified="2014-02-19" version="1">MKSIGGGGAIIPVNGCGNIKVSNPSKCSVGPPLTAIERFLWAQQSHTTQQPPQNVVNKIHASALDGFGGSTYNIVWNNGAREVNFVEQLLANEVALNWTQQVPPLCLKEDLHVSGKNRKRVGRRPKEGSSVPLIKGQWTEEEDRKLLKLVKQHGTGKWSQIAEKLDGRAGKQCRERWHNHLRPDIKKDAWSEEEERILVQYHAKLGNRWAEIAKQMKGRTENAIKNHWNATKRRQNSRRKNKRPGIANGKPLSSILQDYIKSLALTNTSTPSVEQTLAPQHLADIVVTNDNFSLMSESYDDEMFFMQQLLDQNNIIVESVKQTKNINNSSAAFDGYHKQTSNNSQFLTEVTPSGSVHSNLTNSHMSFDESLFHSKRTPTAVSFLDFDVCLSHLHNGTSGSSFFNNNGIHNQNMELHLGKQDCFEERKIIKRNSIQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPE7</accession>
    <name>V7BPE7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SBP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G159700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPE7"/>
    <dbReference type="SMR" id="V7BPE7"/>
    <dbReference type="STRING" id="3885.V7BPE7"/>
    <dbReference type="Gramene" id="ESW19842">
        <property type="protein sequence ID" value="ESW19842"/>
        <property type="gene ID" value="PHAVU_006G159700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUTN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ITSACCC"/>
    <dbReference type="OrthoDB" id="514967at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1100.10">
        <property type="entry name" value="Transcription factor, SBP-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044817">
        <property type="entry name" value="SBP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004333">
        <property type="entry name" value="SBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036893">
        <property type="entry name" value="SBP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31251">
        <property type="entry name" value="SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31251:SF108">
        <property type="entry name" value="SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26102">
        <property type="entry name" value="Ig_SPL7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03110">
        <property type="entry name" value="SBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103612">
        <property type="entry name" value="SBT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51141">
        <property type="entry name" value="ZF_SBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="724"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="domain" description="SBP-type" evidence="7">
        <location>
            <begin position="103"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="36"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW19842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="762" mass="85637" checksum="E5AFDA165908A40E" modified="2014-02-19" version="1">MEPQQSLPPMDDSEDPSSIWDFSYLLDFNIDEDHTNNSLPISSPFNDAPEIPNDRVRKRDPRLTCSNFLAGHVPCACPELDAKLEDEGLPGKKRARTARASSSARCQVPGCEVDISELKGYHRRHRVCLRCANATTVILHGESKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRKPLVDSGCASVVELEAVTQNEESNYDPEAGKDCSNLSNEINAVVVLPDHEDEPVPILRSAPDAQNVNSDSVVSFPVSGETRVNSGNTSNSPSYCDNKSVYTSMCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTSFIAMPDIMWINLRKDSLEYVNKLVAPGKMLSGRGNALVHLNGTIFRVMKDGTSVTKVEVNLQAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLKCEYCVPSPHNWTEENISCAFDNQLYKIYVPHTEESLFGPAFIEVENECGLSNFIPVLIADKEICSEMKTLQQKLDSSLLSKQFRSASGGSICSSCETFTLSHTSSDLLVDIAWLLKDTTSENFDRVMTASQIQRYCHLLDFLMCNESTVMLKKILPNLIILTESMKSNFLINRTSYVDTRQLLNHIHDAQIAIYQKHQKNGSIITLPEMESLKLEQGCSQDSKIATNSQGILSRADAKWGVLKNLTSNGRKERIPLLKREIIMNVEELPERYGRGCLGRGFLTPRPAIFVIVSIAVCLGVCVAVLHPGRVTELAVSVRRCLFNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT16</accession>
    <name>V7BT16_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G148900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT16"/>
    <dbReference type="Gramene" id="ESW19711">
        <property type="protein sequence ID" value="ESW19711"/>
        <property type="gene ID" value="PHAVU_006G148900g"/>
    </dbReference>
    <dbReference type="OMA" id="RCQARKL"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01228">
        <property type="entry name" value="EGGSHELL"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757054" evidence="1">
        <location>
            <begin position="20"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="173" mass="14999" checksum="29D7EB6AD6053021" modified="2014-02-19" version="1">MFSKLLLLAFLLAIIRCQARKLGGFREDKPLFHHFDAYGGGGGSADVIGGGGGNGGYGGGIGGGYGGGSGGFGGGGGGGGSGGFGGGGGGGGNGGFGGGGGGGGGGNGGFGGGNGGYGGGSGSGGTGNGGFGGGGGGDNGKGGGYNGGNGGFGCGGGAGIGRAFMNKLHNTIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTH2</accession>
    <name>V7BTH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G059000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTH2"/>
    <dbReference type="SMR" id="V7BTH2"/>
    <dbReference type="STRING" id="3885.V7BTH2"/>
    <dbReference type="Gramene" id="ESW21297">
        <property type="protein sequence ID" value="ESW21297"/>
        <property type="gene ID" value="PHAVU_005G059000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUH6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEYIHRS"/>
    <dbReference type="OrthoDB" id="1883668at2759"/>
    <dbReference type="PhylomeDB" id="V7BTH2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000007">
        <property type="entry name" value="NAC domain-containing protein 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF171">
        <property type="entry name" value="TRANSCRIPTION FACTOR NAM FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="6">
        <location>
            <begin position="23"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW21297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="35572" checksum="38525C41396A26BC" modified="2014-02-19" version="1">MGVNENFNKDDDHHECVDDDEIPLPGFRFHPTDEELVSFYLRRKLDKKPISIDLIKQIDIYKYDPWDLPKSNGSGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSYGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNTDTNTSLPNSRNYVDVPQEAEIWTLCRIFKRNVSLRKHVPDLKQVSAKRHAFYDKSSRTKNVEFDSANQESYINFGGHYQNEQKPFINYTNSDKRNQFNVMSQLCSTVAQQQPQLSAPSSNLWSNPPGNDFFNFDNWDELGSVVKLAVDSPSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUA4</accession>
    <name>V7BUA4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G001200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUA4"/>
    <dbReference type="STRING" id="3885.V7BUA4"/>
    <dbReference type="Gramene" id="ESW20608">
        <property type="protein sequence ID" value="ESW20608"/>
        <property type="gene ID" value="PHAVU_005G001200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQAP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPCEDRS"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="PhylomeDB" id="V7BUA4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051238">
        <property type="entry name" value="GDSL_esterase/lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650">
        <property type="entry name" value="GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650:SF12">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755344" description="GDSL esterase/lipase" evidence="8">
        <location>
            <begin position="25"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="371" mass="41002" checksum="9190888B317F03EA" modified="2014-02-19" version="1">MKMKHLVLTLTWMLWLSLCGRCLSQVQPRLPPGQQVPCFFIFGDSLVDNGNNNGILTLARANYRPYGIDFPGGATGRFTNGRTYVDALAQLLGFPTYIPPNSRARGLELLRGANYASGAAGIRDETGNNLGGHTSMNDQVANFGNTVQQLRRFFRGDNDSLNSYLSKCLFFSGMGSNDYLNNYFMPDFYSTSSDFTVKAFASALLQDYSRQLSQLYSLGARKVMVTAVGQIGCIPYQLARFHGNSTKCNEKINSAILLFNSGLKKMVQNFNGGQLPGAKFVFLDFYQSSSDLSSNGTSYGFDVMDKGCCGVGKNNGQITCLPLQQPCENRQKYLFWDAFHPTEVANILLAKATYSSQSYTYPINIQQLATQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUP2</accession>
    <name>V7BUP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G196500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUP2"/>
    <dbReference type="SMR" id="V7BUP2"/>
    <dbReference type="STRING" id="3885.V7BUP2"/>
    <dbReference type="Gramene" id="ESW20291">
        <property type="protein sequence ID" value="ESW20291"/>
        <property type="gene ID" value="PHAVU_006G196500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCIPSVF"/>
    <dbReference type="OrthoDB" id="10263751at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003756">
        <property type="term" value="F:protein disulfide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000245">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050620">
        <property type="entry name" value="Thioredoxin_H-type-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438:SF433">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN CXXS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0249">Electron transport</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW20291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="13618" checksum="7BF6B8B71706151C" modified="2014-02-19" version="1">MEASEQNKSKVVVIDSLQSWDFYVTQASNQNSPVVVHFTASWCIPSVAMAPVFEELASSYQDLLFLTVDVDEVKEVATKMDVKAMPTFLLLKNGAVVDKVVGANPEEIKKRIDGLTESTHVSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV29</accession>
    <name>V7BV29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_006G208100g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV29"/>
    <dbReference type="SMR" id="V7BV29"/>
    <dbReference type="STRING" id="3885.V7BV29"/>
    <dbReference type="Gramene" id="ESW20426">
        <property type="protein sequence ID" value="ESW20426"/>
        <property type="gene ID" value="PHAVU_006G208100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FRQDFNN"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000015">
        <property type="entry name" value="Somatic embryogenesis receptor kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000024">
        <property type="entry name" value="Somatic embryogenesis receptor kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000016">
        <property type="entry name" value="Somatic embryogenesis receptor-like kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47988">
        <property type="entry name" value="SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 21" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="16 23" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 21" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10 24" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 23" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 23" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="24">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754754" description="non-specific serine/threonine protein kinase" evidence="24">
        <location>
            <begin position="29"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="23">
        <location>
            <begin position="229"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="25">
        <location>
            <begin position="292"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="22">
        <location>
            <begin position="201"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="22">
        <location>
            <begin position="203"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW20426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="616" mass="67961" checksum="5FB819F965642571" modified="2014-02-19" version="1">MERLTSSFMSSFFVWAILVLDLVLKASGNQEGDALNALKSNLLDPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGQLVSQLGQLTNLQYLELYSNNLSGKIPEELGNLTNLVSLDLYLNNLSGPIPTTLGNLAKLRFLRLNNNTLTGGIPMSLTNVSSLQVLDLSNNHLQGETPVNGSFSLFTPISYQNNPGLIPPKNAPSPVSPTPPPASSGNSNTGAIAGGVAAGAALLFAAPAIALAYWRKRRPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERQESQAPLGWPERKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDRKLETLVDADLVGNYIDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKDETFRQDFNYNIHHPNANWIVDSTSHIQADELSGPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYW9</accession>
    <name>V7BYW9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G140500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYW9"/>
    <dbReference type="SMR" id="V7BYW9"/>
    <dbReference type="Gramene" id="ESW22273">
        <property type="protein sequence ID" value="ESW22273"/>
        <property type="gene ID" value="PHAVU_005G140500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMQEEPG"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000366">
        <property type="entry name" value="Pentatricopeptide (PPR) repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000284">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001695">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g37170"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000031">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF414">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="140"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="242"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="374"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="511"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="589"/>
            <end position="681"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="681" mass="77618" checksum="BCA13B953A180F15" modified="2014-02-19" version="1">MKAVTRVRERLCMPFSSSSHSQHFQFRNDIRNNLKLKDPISENNNFEEAIDVLCQQKRVKEAVELLHRIDHRPSARAYSTLIAACVRHRALELGRRVHAHTKGSNFVLGVFICNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIAGYAKLGRLEQARKLFDEMPRRDNFSWNAAISGYVSHDRPWEALELFRVMQRCERSNSNKFTLSSALAASAAIPCLRLGKEIHGYLMRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKSKDVVSWTTMIHRCFEDGRKEEGLSLFRDLMWSGVRPNEYTFAGVLNECADHAAEHLGKEVHGYMMRVGYDPCSFAVSALVHMYSKCGNTRVARRVFNHMPHKDLVSWTSLIVGYAQNGEPEEALHFFELLLQSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIREKHGLMHSADHYACVIDLLARSGRFKEAENIIDNMPIKPDKFLWASLLGGCRIHGNLELAKRAAKALYDIEPENPATYITLANIYANAGLWTEVAKVRKDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSHIHEFLVELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTGIKYISKIVQRKIIVRDSNRFHCFEDGSCSCKDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZC6</accession>
    <name>V7BZC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Chorismate mutase</fullName>
            <ecNumber evidence="3 7">5.4.99.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G032900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>chorismate = prephenate</text>
            <dbReference type="Rhea" id="RHEA:13897"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
            <dbReference type="EC" id="5.4.99.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Metabolic intermediate biosynthesis; prephenate biosynthesis; prephenate from chorismate: step 1/1.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.5" evidence="3 7"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZC6"/>
    <dbReference type="SMR" id="V7BZC6"/>
    <dbReference type="STRING" id="3885.V7BZC6"/>
    <dbReference type="Gramene" id="ESW23272">
        <property type="protein sequence ID" value="ESW23272"/>
        <property type="gene ID" value="PHAVU_004G032900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0795">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMVQETE"/>
    <dbReference type="OrthoDB" id="191918at2759"/>
    <dbReference type="UniPathway" id="UPA00120">
        <property type="reaction ID" value="UER00203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046417">
        <property type="term" value="P:chorismate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901747">
        <property type="term" value="P:prephenate(2-) biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.590.10:FF:000001">
        <property type="entry name" value="Chorismate mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.590.10">
        <property type="entry name" value="Chorismate mutase, AroQ class superfamily, eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036263">
        <property type="entry name" value="Chorismate_II_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008238">
        <property type="entry name" value="Chorismate_mutase_AroQ_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037039">
        <property type="entry name" value="CM_AroQ_sf_eucaryotic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002701">
        <property type="entry name" value="CM_II_prokaryot"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01802">
        <property type="entry name" value="CM_pl-yst"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21145">
        <property type="entry name" value="CHORISMATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21145:SF0">
        <property type="entry name" value="CHORISMATE MUTASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01817">
        <property type="entry name" value="CM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017318">
        <property type="entry name" value="Chor_mut_AroQ_eu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48600">
        <property type="entry name" value="Chorismate mutase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51169">
        <property type="entry name" value="CHORISMATE_MUT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chorismate mutase" evidence="8">
        <location>
            <begin position="196"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR017318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW23272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="314" mass="36166" checksum="DE8A7C69795F4786" modified="2014-02-19" version="1">MESKLLRITHSVPSTPTCAFHPKARKPSISFNPTLDFAPKSNLSFRAHAASIESVPTKKRIDESEYLTLDQIRHSLIRLEDSIIFSLLERSQYAYNEDTYDPDVFSMDEFHGSLVEYMLRETEKLHAKVGRYKSPDEHPFFPEGLPEPMLPPLQYPQVLHPVAESININDKVWSLYFRVLIPQIVKQGDDGNSGSSAVCDVTCLQVLSKRIHYGKFVAEAKYQASPDAYKSAIFAQDKEKLMELLTYPEVEEAIKRRVDMKTKTYGQEVIINLKEHRTEPVYKINPRLVADLYSDWIMPLTKEVQVAYLLRRLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZF9</accession>
    <name>V7BZF9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Checkpoint protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G032600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the HUS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZF9"/>
    <dbReference type="SMR" id="V7BZF9"/>
    <dbReference type="STRING" id="3885.V7BZF9"/>
    <dbReference type="Gramene" id="ESW23269">
        <property type="protein sequence ID" value="ESW23269"/>
        <property type="gene ID" value="PHAVU_004G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3999">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKICHLY"/>
    <dbReference type="OrthoDB" id="337750at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030896">
        <property type="term" value="C:checkpoint clamp complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035861">
        <property type="term" value="C:site of double-strand break"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044778">
        <property type="term" value="P:meiotic DNA integrity checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033314">
        <property type="term" value="P:mitotic DNA replication checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031573">
        <property type="term" value="P:mitotic intra-S DNA damage checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000723">
        <property type="term" value="P:telomere maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.70.10.10:FF:000010">
        <property type="entry name" value="Checkpoint protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.70.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016580">
        <property type="entry name" value="HUS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007150">
        <property type="entry name" value="HUS1/Mec3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12900:SF0">
        <property type="entry name" value="CHECKPOINT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12900">
        <property type="entry name" value="MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04005">
        <property type="entry name" value="Hus1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011312">
        <property type="entry name" value="Cell_cycle_HUS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="231"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR011312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="318" mass="34985" checksum="1B5ED683C5C59D4F" modified="2014-02-19" version="1">MKFKAFLTDNGVNLLEKRFLPALEKTGKSCHLYLTRDHALFLHNLLNGDGVHSVAQFRKEALFHDYRISSNNDDRIAFALDLSLLLRALRSAVAVASEYSASAATRLEIKLVKKLSPNSTQSMPFLTLETRGYKSAVIQDIPISKPLSRAQVTELQSALESAQELPPTLVQVPDLNQLLNLVDRMKQVGDVVNLFISRHGDLSVQVSTTVISLGAEFRRLVVIGEQTNAPSEDQNLSAQTRSSRSISRGDGQSVQVSVKHFAKSLQCHLARPDCAFYGIAPQGSCLTVIFQFFIPGSRETDKSISLHCRLPVLDPGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZP3</accession>
    <name>V7BZP3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_005G164100g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZP3"/>
    <dbReference type="SMR" id="V7BZP3"/>
    <dbReference type="Gramene" id="ESW22568">
        <property type="protein sequence ID" value="ESW22568"/>
        <property type="gene ID" value="PHAVU_005G164100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HINGELW"/>
    <dbReference type="OrthoDB" id="2017114at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000394">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000146">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase IOS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF202">
        <property type="entry name" value="SENESCENCE-INDUCED RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-0675">Receptor</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 20" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755211" description="non-specific serine/threonine protein kinase" evidence="20">
        <location>
            <begin position="28"/>
            <end position="882"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="510"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="577"/>
            <end position="850"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="604"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW22568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="882" mass="98551" checksum="4226FED3537284BE" modified="2014-02-19" version="1">MVLVYLSPYRVLVTFFIASLCGLLIQAQNQAGFISIDCGASADEKYTEESTGIDYISDANFITTGVSKSIASDLKGMSQQQMWNVRSFPEGRRNCYKINITINSKYLIRTVYLYGNYDGLNKTPKFGLLLGPNFWHTVTIHNASIFQYNEIIHVPTQDYVQICLVDTGLGTPFISAIELRTLTDNLYVQSGSWETQRRWDLGSNKSYRYKDDRYDRYWEASDINDSTKLSVSISDKIIITESEYHPPAIVMSTAVTAVNANAPLVISWEPENETDQFYVYMHFMDVQVLTTNQTRRFNVMLNGKLWYANCSPLYMGGNSIGGPTGLSGKEIKFSLERTENSTLPPIINAIESYRLIESHQSGTYQGDVDAITRIKSVYGVKRDWQGDPCAPATYLWDGLNCTYGDNEVPRITTLNLSSSGLSGNIDTSISNLIMLEKLDLSNNNLTGEVPDFLIQLQHLKILNLEKNDLSGSIPSSLIEKSHEGSLSLSVGQNPNLCESGECNETKKKNIVTPILLVSISGVLILLIAVAILWICKRKKSKVNHQNKISQQSTEKDDSLQSRKSQMYSYNDVLQITNNFNRIIGKGGFGTVYLGFINNTPVAVKMLSPSAVHGYKQFQAEVKLLIRVHHKNLTSLIGYCNEETNKALIYEYMAKGNLREHLSGKYNESPFLSWKERLRVAVDTAQGLEYLQNGCKPPIIHRDVKSTNILLDEHFQAKLSDFGLSKVVPDDGGSHVSTIVAGTVGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQSVTGRNEENGHISERVSSMIPTGDIRAIVDSRLEGNFDINSAWKALEIAMACVSRNPNERPMMSVVVIELQETLATELARTEHNNGADPKYSVAAWSESELMPLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2Z9</accession>
    <name>V7C2Z9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G140200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Heterooctamer of 4 alpha and 4 beta chains.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2Z9"/>
    <dbReference type="STRING" id="3885.V7C2Z9"/>
    <dbReference type="Gramene" id="ESW24552">
        <property type="protein sequence ID" value="ESW24552"/>
        <property type="gene ID" value="PHAVU_004G140200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1417483at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="entry name" value="Succinyl-CoA synthetase domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="14351" checksum="A729FD9FCD0D242D" modified="2014-02-19" version="1">MTEQESGNEKPIVAFIAGLTAPPDRHMGHAGGEQNFSEARYWLYNINRVNSTQLMYMKNINEEDIANFVCWDTRPYQKIFINGYQTWSQGESRLHLLLNFVNNGAPLDSNMSSSRTHVFVSNTIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3J7</accession>
    <name>V7C3J7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G151500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3J7"/>
    <dbReference type="SMR" id="V7C3J7"/>
    <dbReference type="STRING" id="3885.V7C3J7"/>
    <dbReference type="Gramene" id="ESW24689">
        <property type="protein sequence ID" value="ESW24689"/>
        <property type="gene ID" value="PHAVU_004G151500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DSYEEEC"/>
    <dbReference type="OrthoDB" id="9989112at2759"/>
    <dbReference type="PhylomeDB" id="V7C3J7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01868">
        <property type="entry name" value="Rab11_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000274">
        <property type="entry name" value="ras-related protein RABA5a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050209">
        <property type="entry name" value="Rab_GTPases_membrane_traffic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47979">
        <property type="entry name" value="DRAB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW24689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="219" mass="24792" checksum="E2CE3DEC50273FCE" modified="2014-02-19" version="1">MAVADDAFDEQCDYLFKAVLIGDSGVGKTNLISRFAKDEFRLDSKPTIGVEFAYRNIKVMEKLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVRKWLHELREFGGDDMVVVLVGNKCDLVQSREVEKEEGKGYAETERLCFMETSALQNQNVEEAFIEMITKIHDIISHKSLEIKMNGTSLNLPNGKEIHIADEVTATKQPNYCCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3R5</accession>
    <name>V7C3R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Serine incorporator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G161400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TDE1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3R5"/>
    <dbReference type="SMR" id="V7C3R5"/>
    <dbReference type="Gramene" id="ESW24802">
        <property type="protein sequence ID" value="ESW24802"/>
        <property type="gene ID" value="PHAVU_004G161400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2592">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YNPWMAR"/>
    <dbReference type="OrthoDB" id="5963193at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005016">
        <property type="entry name" value="TDE1/TMS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10383">
        <property type="entry name" value="SERINE INCORPORATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10383:SF46">
        <property type="entry name" value="SERINE INCORPORATOR_TMS MEMBRANE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03348">
        <property type="entry name" value="Serinc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="243"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="326"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="371"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW24802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="400" mass="45269" checksum="6E7DFB743C40BF0F" modified="2014-02-19" version="1">MENGESNMSNQRCEVLKDSSWYSQFRNVCNPWLARYVYALIFLVANLLAWAARDELSSLTALTQLKGVKGCKVGKDCLGADGVLRVSMGCFLFYMIMFWSTAGTSKLKEGRDEWHSGWWLVKTVLLILVTIFPFLLPSKLIELYGEVAHFGAGVFLLIQLISIISFITWLTDCFASEKYAERCQIQVMLFATVSYFICLGGIILMYIWYAPLPSCLLNIFFITWTLVLLQLMTSVSLHPKVNAGILSPGLMGLYVVFLCWCAIRSEPAGADCIRKSEPESKTDWQSIISFVVAILALVVATFSTGIDSKCFQFRKSDPPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMKKWTIDIGWTSAWVRIVNEWLAVCVYLWMLVAPIIWKSRHADSTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3X0</accession>
    <name>V7C3X0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MADS-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G061300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3X0"/>
    <dbReference type="Gramene" id="ESW23601">
        <property type="protein sequence ID" value="ESW23601"/>
        <property type="gene ID" value="PHAVU_004G061300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVPNMAQ"/>
    <dbReference type="OrthoDB" id="601557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045944">
        <property type="term" value="P:positive regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00266">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1810.10">
        <property type="entry name" value="Transcription factor, MADS-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033897">
        <property type="entry name" value="SRF-like_MADS-box"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002100">
        <property type="entry name" value="TF_MADSbox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036879">
        <property type="entry name" value="TF_MADSbox_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945">
        <property type="entry name" value="MADS BOX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945:SF564">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00319">
        <property type="entry name" value="SRF-TF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00404">
        <property type="entry name" value="MADSDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00432">
        <property type="entry name" value="MADS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55455">
        <property type="entry name" value="SRF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50066">
        <property type="entry name" value="MADS_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="MADS-box" evidence="6">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW23601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="33538" checksum="B3A906AB7BC6C471" modified="2014-02-19" version="1">MGRARITLKHISNERSRKTTFLRRKRGLMKKISEFSKTCGGEHCLIVFDDDNGDVGPVTSPQNPVEIHSTIQKYYESQLKNGKPHKTYGIDEFLGNRKNMIEVEISKVNKQISNIKYPTWDPSMANMEEDQLRAFCAHVDAKIEACDQGIQLLKNKPLGFVSNMSQENTTATTSHPNQVNYLQSISQSEVLLDDFLNQLNDKNYGMVDFSNTVDVPLNSTNELSDLEFEELIMGLSSCDWPYQACDDPVGCSNEADESVLPHICVEYQNEQQGGGDLHALPPTLDVFQTNYYNMYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4D2</accession>
    <name>V7C4D2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G000100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4D2"/>
    <dbReference type="Gramene" id="ESW25004">
        <property type="protein sequence ID" value="ESW25004"/>
        <property type="gene ID" value="PHAVU_003G000100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESHVFVR"/>
    <dbReference type="OrthoDB" id="1934563at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002140">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF391">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="76"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="180"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="252"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW25004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="478" mass="53758" checksum="65730A735F52A8FC" modified="2014-02-19" version="1">MSPKDGAFWKAQQSLLILLKQCSSMKQLKEMQSRVVQSGFHNTPLVVGKIIEFCAVSGHGDINYAVRVFDRIDKPDAFIWNTMIRGFGMTRQPEKAIDLFRRMLQGKCDVAAIDTFTFSFILKIIAGFRSVILGKQLHCNILKLGLQTHTYVRNSLIHMYGMAKDIETAHRLFDEIPNADLVAWNSIINCHVHCRNYTQALHLFAKMLRSGLQPDHATLVVTLSACGAIGALGFGRRIHYSLVQKHSKLGEDTSVSNSLIDMYAKCGAVEEAYHIFSSMKRKNVISWNVMILGLASHGNGEEALALFAKMLQQNVDRPNDVTFLGVLSACSHGGLIDEGRKWIDIMDRDYNIQPTTKHYGCMVDLLGRAGLVDDAYNLIKNMPVECNAIVWRTLLAACRLHGNVQLGEKIRNHLLELEPDHSSDYVLLANVYASTGLWNEMHKERRLMQQRRIQKPHPGNSFGILGLALEKETIETLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5T8</accession>
    <name>V7C5T8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G042100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5T8"/>
    <dbReference type="Gramene" id="ESW25509">
        <property type="protein sequence ID" value="ESW25509"/>
        <property type="gene ID" value="PHAVU_003G042100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S25X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1302201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33673:SF36">
        <property type="entry name" value="MYB-LIKE PROTEIN Q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33673">
        <property type="entry name" value="SUPPRESSOR SRP40-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="274"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="373"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="296"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="380"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="390"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="400"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="417"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="443" mass="49188" checksum="3D0C5C04FF7A68C0" modified="2014-02-19" version="1">MDLGHCRPSSEDSKSCEGREVESVQMDGEKFDHSKQDKQEKVFSETIDDSLRSKDSSRESGSSSDSEKQIYLISEVESDNTKDSDTHTDGTKSISSSARKRSSCSSSESSSEDFIAVEEAFKYTKSAKDNVPSCESSDKSEVENNFLVPTSTYEVNNLNHIQMDMSPTASPSVQVMDRSGSYDASIFPSSIFEPNTNPSEWSIASNESLFSIQIQPSFSREKALKYGDLCLSKELTKSVELNKQAPSVILEEIDTTKKNVDVEELQAPTSYGSFKFEGERDTEDNNETKTSHGTKSVKSSKSNVSILSHSDNGILPVPPLKKRSRKGYSYSCSWVFCNLCSSCKCLSCCSPFFCCGLCNRTEYHHHTSQILTEEAERNGSTKMDVSQQESGKHESDKQESGMTRDTNVIQTKEESEVPSNSKDNNSTWFHSLSCPWNPSSNCC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5Y8</accession>
    <name>V7C5Y8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Homeobox-leucine zipper protein ANTHOCYANINLESS 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_004G120500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HD-ZIP homeobox family. Class IV subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5Y8"/>
    <dbReference type="STRING" id="3885.V7C5Y8"/>
    <dbReference type="Gramene" id="ESW24321">
        <property type="protein sequence ID" value="ESW24321"/>
        <property type="gene ID" value="PHAVU_004G120500g"/>
    </dbReference>
    <dbReference type="OMA" id="PINMQSL"/>
    <dbReference type="OrthoDB" id="6159439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08875">
        <property type="entry name" value="START_ArGLABRA2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000229">
        <property type="entry name" value="Homeobox-leucine zipper protein HDG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042160">
        <property type="entry name" value="HD-Zip_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057993">
        <property type="entry name" value="HD-Zip_IV_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002913">
        <property type="entry name" value="START_lipid-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654:SF49">
        <property type="entry name" value="HOMEOBOX LEUCINE ZIPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25797">
        <property type="entry name" value="PDF2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01852">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00234">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50848">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0371">Homeobox</keyword>
    <keyword evidence="8 9 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="12">
        <location>
            <begin position="53"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="START" evidence="13">
        <location>
            <begin position="258"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="9">
        <location>
            <begin position="55"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="22"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="54"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW24321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="743" mass="81810" checksum="B7B534B9D5FAF1AF" modified="2014-02-19" version="1">MEGRSEMGLIGESFDTSNLLGRLRDDDYESRSESDNFDGGSGDDQDVGDDQPQRKKKKYHRHTPQQIQDLEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMVLKQENDKLRAENGVMKEALANPICNNCGGPAIPGQISLEEHQTRIENARLKDELNRICTLANKFLGRSLSSLATPMSLPPTNAGLELAIGRNGIGGSSNFGMPLPIGFEVGDGGLGSSPAMQSMAARVPVGMMGNEIHLERSMLIDIAINAMDELVKMARQDNPLWIKSSDGRNEVLNCEEYAGIFPTFVGTKPAGYVTEATRATGVVLASSLGLVETFMDVDRWSEMFSSMVASACTLDVLSSGTNGTRNGALQVMLAEFQLLSPLVPTRQLSFLRFCKQHAEGVWVVVDVSVDIIRNAANSHPLMSCKRLPSGCIIQDMTNGLSKITWVEHSQYDEGVIHQLCRPLVSSGIGFGAQRWIASLLRQCDCLAILMSPPAPSDDPIVLSQSNRRSIMKLAQRMTECFCSGICASSARKWDVLHIGSLADDMKIMARKTVDDPNEAPGIVLSASTSVWMPVSRQRVFDFLRNEQLRGEWDMLSKGGPMKEMLHVPKGQEHGNCVSILHYANNESNMFYLQESWTDASGSMVVYSPINMQSLNMMMNCGDSSFVALRPSGFAILPDGHSNNSDNNDGGGSCLLTVGLQMLQNDNQSAKFTMESVQTVNSLLSCTIQKVKEALGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6B0</accession>
    <name>V7C6B0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Glutamate receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_003G057300g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Glutamate-gated receptor that probably acts as a non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.</text>
    </comment>
    <comment type="function">
        <text evidence="15">Glutamate-gated receptor that probably acts as non-selective cation channel.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">May form heteromers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6B0"/>
    <dbReference type="SMR" id="V7C6B0"/>
    <dbReference type="STRING" id="3885.V7C6B0"/>
    <dbReference type="Gramene" id="ESW25692">
        <property type="protein sequence ID" value="ESW25692"/>
        <property type="gene ID" value="PHAVU_003G057300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1052">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWVGARI"/>
    <dbReference type="OrthoDB" id="5984008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated monoatomic ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13686">
        <property type="entry name" value="GluR_Plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd19990">
        <property type="entry name" value="PBP1_GABAb_receptor_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.70:FF:000037">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.190.10:FF:000103">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2300:FF:000188">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.10">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001828">
        <property type="entry name" value="ANF_lig-bd_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044440">
        <property type="entry name" value="GABAb_receptor_plant_PBP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019594">
        <property type="entry name" value="Glu/Gly-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015683">
        <property type="entry name" value="Ionotropic_Glu_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017103">
        <property type="entry name" value="Iontropic_Glu_rcpt_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18966">
        <property type="entry name" value="IONOTROPIC GLUTAMATE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01094">
        <property type="entry name" value="ANF_receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00060">
        <property type="entry name" value="Lig_chan"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10613">
        <property type="entry name" value="Lig_chan-Glu_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037090">
        <property type="entry name" value="Iontro_Glu-like_rcpt_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="Periplasmic binding protein-like I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53850">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13 15" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8 15" id="KW-0406">Ion transport</keyword>
    <keyword evidence="12 15" id="KW-1071">Ligand-gated ion channel</keyword>
    <keyword evidence="9 15 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 15" id="KW-0675">Receptor</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 18" id="KW-0732">Signal</keyword>
    <keyword evidence="5 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 15" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755803" description="Glutamate receptor" evidence="18">
        <location>
            <begin position="27"/>
            <end position="895"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="563"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="595"/>
            <end position="613"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="625"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="803"/>
            <end position="822"/>
        </location>
    </feature>
    <feature type="domain" description="Ionotropic glutamate receptor C-terminal" evidence="19">
        <location>
            <begin position="446"/>
            <end position="782"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="16">
        <location>
            <begin position="730"/>
            <end position="785"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00049638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR037090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR037090-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW25692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="895" mass="102295" checksum="819F60BBD17A3F5E" modified="2014-02-19" version="1">MNLPSTICLSYLLLSFLLITYYQVEATDGENQVISIGVIIDVNSRIGKEQRVAMDLAVQTYNTTSNTYKLALHFQQPIKDPFRPTSLARRMIMRQKMQVIIGMHTWEEAASVAELVRKSQVPVISFAAPSITPPLMPIRWPSLVRMANNGTAYAKCVADMVHAYSWQRVVVIYEDGDYEMLALLSETLQDVGSLIEYRLALPSLSYLSNPAEFIREELFKVIENTQSRVFIVLQSSLEMVIHLFREASQMGLVDGESAWIIPESITNLLDSVNKSAISYMEGALGIKTYYSELSSEYQNFEVRFRKSFRAKYPEEDNSSPGFYALQAHDSIKIVAQAIDRMESDRNTLLREILSSNFVGLSGEIRFEAAQLSQNSTFRIVNVDRKSYRELDFWTPEGGFMSSLPTEQGSNSVSRNTKSLSDVVIWPRKLTTIPKGWNLPTKQKPMKIAVPGRTSFSKFVKVDRDELTNKYKYTGFCIDIFEKVLPLLGYDLPYDFHPVNGTYPDLVQLVYNKTYDAVVGDVTILEERLQYVDFTMPYAESGLSMIVTEKSEESTWMFMKPFTWQMWVATGAVLMYTMVVVWCLERKPNPEFQGNWKSQISTALMFTFSSLFFAHREKIYNNLTRVVMVSWLFLVLILNSSYTASLSSMLTVQRLRPNVTDIECLKKNNMKIGCDGDSFVRTYLEQVEDFKPENILHINSEYSYEDAFKNNTIAAAFLEVPYEKVYISKYCKGYSAFVPTIKFGGLGFMFQKGSPVAKDFSRAILKLLEQGELKKLEDKWLNTDECFNNSTSDRTQSLRLGSFWVLYVLSGVTSTICFLLYTIQSLKSSHTLQHEAEERNGNLSDESQWKRILDIAKHIYSRKHPPFTREHQQAMAPQLPDIITVTSPPTVTVHNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6I9</accession>
    <name>V7C6I9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NPH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G064600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the NPH3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6I9"/>
    <dbReference type="STRING" id="3885.V7C6I9"/>
    <dbReference type="Gramene" id="ESW25777">
        <property type="protein sequence ID" value="ESW25777"/>
        <property type="gene ID" value="PHAVU_003G064600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSYM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DERFMNQ"/>
    <dbReference type="OrthoDB" id="624345at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043454">
        <property type="entry name" value="NPH3/RPT2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027356">
        <property type="entry name" value="NPH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32370">
        <property type="entry name" value="OS12G0117600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03000">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51649">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="NPH3" evidence="4">
        <location>
            <begin position="209"/>
            <end position="518"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW25777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="632" mass="70538" checksum="26D597BB8E85D313" modified="2014-02-19" version="1">MKFMKLGSRPDTFYTAESIRTISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESSDSPQQQIVQLPEFPGGVEAFELCAKFCYGITITLSAYNIVTARCAAEYLQMTEDVEKGNLIYKLDVFFNSCILNGWKDSIVTLQSTKALPLWSEDLAITSRCIETIASKVLSHPSKVSLSHSHSRRVRDDVSSCNGTESLRHKSASKGWWAEDLADLSIDLYWRTMIAIKSGGKTPSNLIGDALKIYASRWLPNIRKNVLVKRETESDSDSDSDSASEVSSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKAANILKASASSKVELATRVGLQLEEASVNDLLIRSVSKTNNMLYEVDLVMTILEQFLLQGQSPPTSPPRSRFTIERRRSRSAENIKFEFQESRRSSSASHGSKLKVAKLVDSYLQEVARDVNLPLSKFIALAETIPDFARQDHDDLYRAIDIYLKAHPELNKNERKRLCRILDCKKLSVEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDMPSNIKALLTAHGIDPSKHTAPLSTTTSIHADDNWSVSGFKSPKSTRNPTLRMKLAEDDLDENVVPRDEIGRTSRFKGLLALPTQPKRMFSKLWAANRTATEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C826</accession>
    <name>V7C826_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G004300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C826"/>
    <dbReference type="STRING" id="3885.V7C826"/>
    <dbReference type="Gramene" id="ESW25066">
        <property type="protein sequence ID" value="ESW25066"/>
        <property type="gene ID" value="PHAVU_003G004300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0716">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWADSEH"/>
    <dbReference type="OrthoDB" id="376357at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45295">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ C76, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45295:SF1">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ C76, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13370">
        <property type="entry name" value="Fer4_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54862">
        <property type="entry name" value="4Fe-4S ferredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="486"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="3">
        <location>
            <begin position="104"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="396"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="396"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW25066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="511" mass="56307" checksum="B84B5DC44D939488" modified="2014-02-19" version="1">MGHVVIWQKQRFETVPYDTMMSYPLSLPCSSYTHSSINTNINMNMNMATASSASLCLPSHIIKKPLGFQPSSLQNKSFSKSNASTSTLTCKASSSSSSSVIDFDLYELLGIDSSCDQSEVKGAYRSLQKRCHPDIAGPAGHDMAIILNEAYAILSDPNARFAYDKEQAKSSEFKGFTGRPIYSVWRGSESEQRAIFVDEIKCVGCLKCALLAEKTFAVESVYGRARVVAQWADSPQKIDAAIESCPVNCISVVERSNLAALEFLMSKQPRGNVRVGAAHTAGARVANIFVDVEKFQSRFQEKASKSSKETNLQKESRMSAIQAIRSISNWLYWQSPGSSSSKSEKSMTRVVYKLPEPDMGKLRDAAARKKVRESTRTKHQAPLNCIHPEDYWTPSTHVLPSSTTTTPTPEKPSITTKGQKNTKESDHELYENQNSPIRWGLPMVTALTALVTVQVQHTVGSTHELQEHVGGSLALDIVNSSWLQCMLAAATWYIIGMAITELLALIGNKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB64</accession>
    <name>V7CB64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Peptidase S54 rhomboid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G125100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase S54 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB64"/>
    <dbReference type="STRING" id="3885.V7CB64"/>
    <dbReference type="Gramene" id="ESW26510">
        <property type="protein sequence ID" value="ESW26510"/>
        <property type="gene ID" value="PHAVU_003G125100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2632">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IPEVHID"/>
    <dbReference type="OrthoDB" id="10257275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1540.10:FF:000026">
        <property type="entry name" value="Rhomboid-like protein 14, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43066:SF1">
        <property type="entry name" value="RHOMBOID PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43066">
        <property type="entry name" value="RHOMBOID-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="Rhomboid-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="116"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="185"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S54 rhomboid" evidence="9">
        <location>
            <begin position="74"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW26510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="36391" checksum="862E6AFBE5238A47" modified="2014-02-19" version="1">MEVRIGQRVSRGMLPLLALHTFSEYYRSEHKPPVTAALIAANTIIYLRPSLFESLIPPIQQVWFNPHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVDFASMVASVLLLSQGVTLILSKSLLLFFDYDKPYYNEYAVGFSGVLFALKVVLNSQSSDYSYVHGVIVPSRYAAWAELILVQLLVPGVSFIGHLGGILAGLLYVKLRNTYSGSNPITLLVRGVTDFLKWPFKFLPRRGRITGRGTVGTNRAWRCQTCTYENNSGLRSVCEMCGTSNGVDGFSSFQRSSRSDGLPLDELRRRRLDRFARYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBD9</accession>
    <name>V7CBD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Myb-related protein 123</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G132100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="AlphaFoldDB" id="V7CBD9"/>
    <dbReference type="SMR" id="V7CBD9"/>
    <dbReference type="STRING" id="3885.V7CBD9"/>
    <dbReference type="Gramene" id="ESW26590">
        <property type="protein sequence ID" value="ESW26590"/>
        <property type="gene ID" value="PHAVU_003G132100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSNHGDH"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000302">
        <property type="entry name" value="Transcription factor TT2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB8-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999:SF96">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR MYB6-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="11">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="10">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="11">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="10">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="118"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="122"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00083772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW26590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="311" mass="35714" checksum="56609B6FDC11AA43" modified="2014-02-19" version="1">MGRSPCCSKEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDGHKTSTTCRRPSNENSTQNPMSLPKDSHLVRTKATKCTKVFFPHPSMLQLPNKSEEEEEHEEEEEERIVDAVVSDQMELTTNNNGFLSFPNEEKELSTDMLTDFNVGDICLSDLLDSDFSNIYNFTCTTNAVHNNNNDNQLFSPCSDQPYPVCSDELLKNWKQSNFADETNASNNLHSFISFLETSEERVGQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBW4</accession>
    <name>V7CBW4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G116500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBW4"/>
    <dbReference type="SMR" id="V7CBW4"/>
    <dbReference type="STRING" id="3885.V7CBW4"/>
    <dbReference type="Gramene" id="ESW26396">
        <property type="protein sequence ID" value="ESW26396"/>
        <property type="gene ID" value="PHAVU_003G116500g"/>
    </dbReference>
    <dbReference type="OMA" id="CRQSPHY"/>
    <dbReference type="OrthoDB" id="1918674at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd15796">
        <property type="entry name" value="CIF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000009">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034087">
        <property type="entry name" value="C/VIF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052421">
        <property type="entry name" value="PCW_Enzyme_Inhibitor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36710">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36710:SF11">
        <property type="entry name" value="PLANT INVERTASE_PECTIN METHYLESTERASE INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="4">
        <location>
            <begin position="30"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW26396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="21558" checksum="E0BE71B910C3BD26" modified="2014-02-19" version="1">MIFTSSSTFILIQLVTSLIFLITPILSILTHAGLLEQICHQSPNYHLCVMTLRSSIHHRSREDMAGFARLTLEIVNSNSSTTLEHIHKSYGETTNPKVKKALEYCLVSYNTIVDVHLREALDAMKESNYKIAQQKIYVIIIEVESCNNKFKNLVISPLRNTNRYVQNLCSITISIINNLIQPYQPISTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDZ9</accession>
    <name>V7CDZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF7963 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G215500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDZ9"/>
    <dbReference type="STRING" id="3885.V7CDZ9"/>
    <dbReference type="Gramene" id="ESW27593">
        <property type="protein sequence ID" value="ESW27593"/>
        <property type="gene ID" value="PHAVU_003G215500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPU0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SCQFQGL"/>
    <dbReference type="OrthoDB" id="1873691at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058269">
        <property type="entry name" value="DUF7963"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF24">
        <property type="entry name" value="F16P17.2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25908">
        <property type="entry name" value="DUF7963"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="790"/>
            <end position="812"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7963" evidence="3">
        <location>
            <begin position="14"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="119"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="832" mass="93694" checksum="D246C29009577EDC" modified="2014-02-19" version="1">MAATNAGTSVESASADEAAAKTAQKRYEGLLMVRNKAIKGKGAWYWTHLEPLLVHNTETGLPKAVKLRCSLCDAAFSASNPSRTASEHLKRGTCPNFNSAAKPISSIFPVVVPSSSPSSASPFSVQHNHRKRTTTSPSASGSGSGSLYHAPSRFGSGLVPQQPHLVLSGGKEDLGALAMLEDSVKKLKSPKTSPGPALSKAQIDSAIEFLSDWVYESCGSVSFASLEHPKFRAFLSQVGLPAVFPQELTGARLEARFEEAKVESEARIRDAMFFQIASDGWKWNENVNENGKSYDSGLVNLSVNLPNGTSLYRRALFVTASAPSKYAEEVLWETITGICGNLVQQCAGIVADRFKAKALKNLENQNHWMVNLTCQYQGFNSLVKDFAKELPLFRAVVHNCLKLANLFNYTSQVRNSFHKYQLQEYGHTWLLRVPLHEFELGPVYAMMEDTLSSVRALQLVLLDEPFKMVAIEDQGAREVGDMIRDVGFWKDLEAVHGLVKLVKDMAQEIEAERPLVGQCLPLWDDLRAKVKDWCSKFHIAEGVVEKLVERRFKKNYHPAWAAAYILDPLYLVRDTSGKYLPPFKYLTPEQEKDVDKLITRLVARDEAHIALMELMKWRTEGLDPVYAQAVQMKERDPVTGKMRIVNPQSSRLVWETYLTEFKSLGKVAVRLIFLHATSCGFKCNWSLWRWVCARGHHSRTALNKVQKLIFIAAHSKLERRDFSSDQEKDAELFTLANGCCEVHAEPLDDESHDHDFVRKVLRRPTREECRNEAAQKMLRSILQQRELTKFLPFGFLFSFLFQTLISTLHAVCGVERKFIKLNCLLKFHFLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG00</accession>
    <name>V7CG00_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G273200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG00"/>
    <dbReference type="SMR" id="V7CG00"/>
    <dbReference type="Gramene" id="ESW28273">
        <property type="protein sequence ID" value="ESW28273"/>
        <property type="gene ID" value="PHAVU_003G273200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVF3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVWGWYL"/>
    <dbReference type="OrthoDB" id="1869137at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37891">
        <property type="entry name" value="OS06G0113900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37891:SF1">
        <property type="entry name" value="OS06G0113900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="224"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="309"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="376"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="404"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="443"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="470"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="511" mass="56551" checksum="E70332DCF990869B" modified="2014-02-19" version="1">MKEPHTQESLVLEPQNGDTIETRSIRSSKSYANEQVTGEEASRFEVWGWYLYEFCSYFIQTVLIPVLFPLIISQLQHLPRDPVKEWFKNHQGLVCAQKEINLYSTLTERSIRVSGSTFSSLEWTSIAWGAGLALAAPILPFISFYINASFQTLITASSTAIGALFCLPVGLFKTTKIFILYIAIIVLAITLSTATHTHHLALMAPTFSTPPLKRLTLFSTKQGLTSWISLYATVAGCLGACIVSSFTYHMLREPIEHEFISLWIVSIFSGLLWLVGVLHVFTAENRASSVPSILSSRLQLFTIFKYPNAIGGLVSVLLSSFTTMSIFTGGVLFIVGQLCIEPVHLLYFWLTYFLFPLLSLPLLFQPLQHLIKANSVKMKIMGFLLSLISSGFGFYFWERHWKWGHLLVFGAIQGTSSGLLHSFGRVLMLDSAPRGEEGGFCVWYSWVRGVGLCGGFTVGSVVAGRVRTSFGAAFCSAIVGIVVLLFGNVSEFGVDKEGDEMALDSKESISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJH0</accession>
    <name>V7CJH0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">K-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G143800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJH0"/>
    <dbReference type="STRING" id="3885.V7CJH0"/>
    <dbReference type="Gramene" id="ESW30327">
        <property type="protein sequence ID" value="ESW30327"/>
        <property type="gene ID" value="PHAVU_002G143800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTCKEEQ"/>
    <dbReference type="OrthoDB" id="1898716at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002487">
        <property type="entry name" value="TF_Kbox"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01486">
        <property type="entry name" value="K-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51297">
        <property type="entry name" value="K_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="K-box" evidence="2">
        <location>
            <begin position="25"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="25"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="18718" checksum="5F8D5F78E0138C58" modified="2014-02-19" version="1" fragment="single">VKSMIERYNTCKEEQHHLINPESEVKFWQREAEILRQQLQILQENHRQLMGEQLYGLSVKNLQDLENQLEMSLQGVRIKKEQILKDEIQELNRKGNLIFQENVELYKKVYGTTDTATTSRNAFDPLPYGMHVGGHSQELVQLQLCQPEQEAYDTSDTATK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK31</accession>
    <name>V7CK31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BAH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G157900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="AlphaFoldDB" id="V7CK31"/>
    <dbReference type="SMR" id="V7CK31"/>
    <dbReference type="STRING" id="3885.V7CK31"/>
    <dbReference type="Gramene" id="ESW30499">
        <property type="protein sequence ID" value="ESW30499"/>
        <property type="gene ID" value="PHAVU_002G157900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1886">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHRNECL"/>
    <dbReference type="OrthoDB" id="1922186at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001217">
        <property type="term" value="F:DNA-binding transcription repressor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061628">
        <property type="term" value="F:histone H3K27me3 reader activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045814">
        <property type="term" value="P:negative regulation of gene expression, epigenetic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034244">
        <property type="term" value="P:negative regulation of transcription elongation by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000028">
        <property type="term" value="P:regulation of photoperiodism, flowering"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd04713">
        <property type="entry name" value="BAH_plant_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.30">
        <property type="entry name" value="Transcription elongation factor S-II, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="BAH_dom"/>
    </dbReference>
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        <property type="entry name" value="BAH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003618">
        <property type="entry name" value="TFIIS_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036575">
        <property type="entry name" value="TFIIS_cen_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46871">
        <property type="entry name" value="BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46871:SF1">
        <property type="entry name" value="BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01426">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07500">
        <property type="entry name" value="TFIIS_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00439">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00510">
        <property type="entry name" value="TFS2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46942">
        <property type="entry name" value="Elongation factor TFIIS domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51038">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51321">
        <property type="entry name" value="TFIIS_CENTRAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BAH" evidence="2">
        <location>
            <begin position="86"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="TFIIS central" evidence="3">
        <location>
            <begin position="309"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="236"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="330"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="248"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="272"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW30499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="522" mass="59808" checksum="8C01F39B2B8740A6" modified="2014-02-19" version="1">MVNRPRLTRVATSDDEDEALRPQRTRKRMRLLEEDNDDDNEEEGKEEVPEPPQPAEDAKPIGDAVRVSGKGRGRKRHYDSFEFDGIQYTLEDPVLLVPEEKGQKPYVAIIKDITQSINGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDKDYEDIKQQEIDVLVQKTLERIGELLDIEPKEAPDDDEDQMKHRRSLSLRRKSVSPSNVSKEEEETLRSEQHPKSETPVTYVTNASEYYGILVKFNALTGDSHRDKWLERLLQRIQYMCDSNDSKERDKGLGNVNSDEINGGSKHISSESVNDCQDKVQKSSKSFIWPDAAVSAIVSLEKASHEALSSDSTKYNQKLRQLVFNLQKNAVLACRLLSGELEPSKLLNMTPNELKEGLVADKRTEKPHETQHLQMTDGRCSKCMEFKVGLREIIHAGNNERYQLECVSCGHSWYASRDEVSMPIIDSSDSKRNIGTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKG4</accession>
    <name>V7CKG4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G171600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKG4"/>
    <dbReference type="SMR" id="V7CKG4"/>
    <dbReference type="STRING" id="3885.V7CKG4"/>
    <dbReference type="Gramene" id="ESW30652">
        <property type="protein sequence ID" value="ESW30652"/>
        <property type="gene ID" value="PHAVU_002G171600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRAX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQGNNIM"/>
    <dbReference type="OrthoDB" id="1841925at2759"/>
    <dbReference type="PhylomeDB" id="V7CKG4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000007">
        <property type="entry name" value="NAC domain-containing protein 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF77">
        <property type="entry name" value="PROTEIN FEZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="6">
        <location>
            <begin position="15"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="401" mass="44977" checksum="65C1DFBE4F97FA8A" modified="2014-02-19" version="1">MEERNDNGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQSPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTNPSSSPKKFMDKTIPANESWAICRIFKKTNATAQRALSHSWVSPLPETTTSDHMLGTDRYGNQFSTANMLFPKKTSLASQFCTFNHNDTQHSTTTTSTPCPIDILSSYNKPIINPLMLYKPLDLLPISNGDLSTGLIFSCPLETSTNSAKSSMDVSSLLMSTSTSVLGEFNSKTSEGLSTNFGGLQEHGYQIPLLREMQGSFGNHDDNVFIKIPNVDVAHVGEQQSETVRSTGFPISIGDAWKPNVLWDSSSLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMD0</accession>
    <name>V7CMD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G121600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMD0"/>
    <dbReference type="STRING" id="3885.V7CMD0"/>
    <dbReference type="Gramene" id="ESW30066">
        <property type="protein sequence ID" value="ESW30066"/>
        <property type="gene ID" value="PHAVU_002G121600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT73">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="3219396at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22166">
        <property type="entry name" value="F-box_AtSKIP31-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1280.50:FF:000048">
        <property type="entry name" value="F-box family protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052121">
        <property type="entry name" value="F-box_SCF_Substrate_Recog"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004289">
        <property type="entry name" value="Herpes_UL92"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46550">
        <property type="entry name" value="F-BOX ONLY PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46550:SF1">
        <property type="entry name" value="F-BOX PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03048">
        <property type="entry name" value="Herpes_UL92"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
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    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="F-box" evidence="4">
        <location>
            <begin position="75"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="17"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="37084" checksum="2FDD41D6DBF9A238" modified="2014-02-19" version="1">MTFSEDEDETLAQFLESEVLSEVSDKEEETGEERKTKRKRVEEDESTKEKPSSDSSPAQKNIVVNNSVVLRRIETGCFSKIPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMIELVRNCQNEFKEYYIQMQAAKRSQAPLPSQLKDDRIILDKTLADQVESWKSSRGLSNTVVTDHTCTGETCSYYQIGDVFICEKTGQVHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQLQGAATDEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMG7</accession>
    <name>V7CMG7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G153900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMG7"/>
    <dbReference type="STRING" id="3885.V7CMG7"/>
    <dbReference type="Gramene" id="ESW30450">
        <property type="protein sequence ID" value="ESW30450"/>
        <property type="gene ID" value="PHAVU_002G153900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY2A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNDVEIF"/>
    <dbReference type="OrthoDB" id="676764at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045277">
        <property type="entry name" value="DRE1A-I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839:SF91">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="9">
        <location>
            <begin position="57"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW30450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="216" mass="24572" checksum="171BE1C1AA459F1C" modified="2014-02-19" version="1">MEIFTSTHDHDSEASCETGSPTRVQSSGCSDEEVILASSRPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNSRIWLGTYRTPEMAARAHDVAALALRGKSACLNFADSVWRLTVPDTTDAEEIRRAAVEAAEAFVAEDVNQQRRSEEIEEPLRLQQEEAMSEDEELHELLMRIANEPLMSPPPCVRDGSGWNDVEIFDAEVSLWNFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMQ4</accession>
    <name>V7CMQ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Dynamin-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G242700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMQ4"/>
    <dbReference type="SMR" id="V7CMQ4"/>
    <dbReference type="STRING" id="3885.V7CMQ4"/>
    <dbReference type="Gramene" id="ESW31492">
        <property type="protein sequence ID" value="ESW31492"/>
        <property type="gene ID" value="PHAVU_002G242700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0446">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VIANQFK"/>
    <dbReference type="OrthoDB" id="5061070at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08771">
        <property type="entry name" value="DLP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001237">
        <property type="entry name" value="Dynamin-related protein 4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1240">
        <property type="entry name" value="Dynamin, middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022812">
        <property type="entry name" value="Dynamin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001401">
        <property type="entry name" value="Dynamin_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045063">
        <property type="entry name" value="Dynamin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000375">
        <property type="entry name" value="Dynamin_stalk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030381">
        <property type="entry name" value="G_DYNAMIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003130">
        <property type="entry name" value="GED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020850">
        <property type="entry name" value="GED_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11566">
        <property type="entry name" value="DYNAMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11566:SF173">
        <property type="entry name" value="DYNAMIN-RELATED PROTEIN 4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01031">
        <property type="entry name" value="Dynamin_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00350">
        <property type="entry name" value="Dynamin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02212">
        <property type="entry name" value="GED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00195">
        <property type="entry name" value="DYNAMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00053">
        <property type="entry name" value="DYNc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00302">
        <property type="entry name" value="GED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51718">
        <property type="entry name" value="G_DYNAMIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51388">
        <property type="entry name" value="GED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0505">Motor protein</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dynamin-type G" evidence="5">
        <location>
            <begin position="69"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="GED" evidence="4">
        <location>
            <begin position="588"/>
            <end position="681"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="686" mass="76375" checksum="406DAC15DAA3A60C" modified="2014-02-19" version="1">MAGGKKSNTKTAAAAGFKRDNKESRALVHAEQPQALAVVAPIVSSYNERIRPVLDAVENLRRLNIAKEGIQLPSIVVVGDQSSGKSSVLESLAGISLPRGQGICTRVPLVMRLQNHPLSSPELVLEYNGKTIHTDEANVSNAINAATEELAGNGKGISNNPLTLVVKKNGVPDLTMVDLPGITRVPVHGQPENIYDQIKDIIMEYITPEESIILNVLSASVDFTTCESIRMSQSVDKTGLRTLAVVTKADKSPEGLLEKVTADDVSIGLGYVCVRNRIGDESYEDARIEEERLFDTHSLLSKIDKSIVGIPVLAQKLVQVQAMSISKTLPEIVKKINEKLSNNLSELDKLPSSLASVADAMTAFMRIIGQTKDSLRKILLRGEFDEYPEQKNMHCTARLVEMLDSYSFDLYCCAESDLTKDFLLAEIRVLEEAKSIGLPNFMPRAAFLTLLQSKVRGIRNMPIGFVEKVWNYLEDVLISCITGHCENYYQLLISTKRAAKVLIDKKKQQSINHVLEAIDMEMYTDYTCDLEFSQEYNRLMSLQAEFMNEVLSEDMPSHVTLDGVGKVDVNHLRQYPSVINQAFDLKHSFDLKVRMISYWEIVRKRLIDSIALHLMLSIQNLVNNDLEKEIVRDLLSPTGGGIERLLEESPSISGKREKLQTSLRVLRQSRDTVGHIIDSIGSYTDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPJ4</accession>
    <name>V7CPJ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ycf20-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G212700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ycf20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPJ4"/>
    <dbReference type="STRING" id="3885.V7CPJ4"/>
    <dbReference type="Gramene" id="ESW31140">
        <property type="protein sequence ID" value="ESW31140"/>
        <property type="gene ID" value="PHAVU_002G212700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZMD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRTCFLW"/>
    <dbReference type="OrthoDB" id="1853217at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007572">
        <property type="entry name" value="Uncharacterised_Ycf20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33787">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33787:SF4">
        <property type="entry name" value="YCF20-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04483">
        <property type="entry name" value="DUF565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="123"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="150"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="182"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW31140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="208" mass="22360" checksum="E67A8F328A41B574" modified="2014-02-19" version="1">MACRVGSSILKCSFTNTENESCKKSCIALATSRIHSCVCEPNINRLTLKDGMKSSPFAQSCFLGRRAEWKIAFALNTGGVSGNGDQQSFNEASSNLGGTRLGRILSAGGRQLLEKLNSTRKNLPLKIFLLLFGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYRKPANARPGRLQSFLVMVNFWKAGICLGLFVDAFKLGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPM5</accession>
    <name>V7CPM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G191000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPM5"/>
    <dbReference type="SMR" id="V7CPM5"/>
    <dbReference type="Gramene" id="ESW30891">
        <property type="protein sequence ID" value="ESW30891"/>
        <property type="gene ID" value="PHAVU_002G191000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WQDVSEV"/>
    <dbReference type="OrthoDB" id="1700852at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000442">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g49710"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000325">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g14820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000073">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF409">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="133"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="164"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="265"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="366"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="581"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="673" mass="75690" checksum="046923E378BBAA32" modified="2014-02-19" version="1">MGMFGLSRRSFFRVCVSVPTVVQIVLLHKPTCKMTTFRIAKEQFATLCSKGHVREAFESFVSEIWEEPHLFSNLLQACVRLKSVSLGKQIHSLILTSGCSSDKFISNHLLNLYSKFGELRASVALFDRMPRKNIMSCNIMIKAYLEMGNIESARNLFDAMPERNIATWNAMVTGLAKFEMNEESLIIFSRMNELGLVPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLVVGCSLAHMYMKARSMDDGERVINCMPAYNLVAWNTLMAGKAQKGSFEGVLDQYCKMKKAGFRPDKITFVSVISSCSELAILGQGKQIHAEAIKAGASYEVSVVSSLVSMYSRCGCLQESFKSFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNQMEQENQPVNEVTFLSLLYACSHCGLKDKGLDFFDMMVKKYGLGARLKHYTCVVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKLHKNAEIGRRVAAEVLTIDPQDSASYVLLANIYSSAKRWHNVSEVRTAMKDKMVKKEPGVSWVEVKNQVHQFHMGGECHPKLVEINQYLEQLTSEMKKRGYVPDTNSVLHDMDNEEKEQNLRHHSEKLAISFALMSTPVGVPIRVMKNLRVCSDCHVAIKYISEIKNVEIIVRDSSRFHHFKNGTCSCGDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQJ9</accession>
    <name>V7CQJ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Nuclear transcription factor Y subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G246600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the NFYA/HAP2 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQJ9"/>
    <dbReference type="SMR" id="V7CQJ9"/>
    <dbReference type="STRING" id="3885.V7CQJ9"/>
    <dbReference type="Gramene" id="ESW31539">
        <property type="protein sequence ID" value="ESW31539"/>
        <property type="gene ID" value="PHAVU_002G246600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW31540">
        <property type="protein sequence ID" value="ESW31540"/>
        <property type="gene ID" value="PHAVU_002G246600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1561">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RHMHALR"/>
    <dbReference type="OrthoDB" id="1097733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016602">
        <property type="term" value="C:CCAAT-binding factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018362">
        <property type="entry name" value="CCAAT-binding_factor_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001289">
        <property type="entry name" value="NFYA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12632">
        <property type="entry name" value="TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02045">
        <property type="entry name" value="CBFB_NFYA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00616">
        <property type="entry name" value="CCAATSUBUNTB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00521">
        <property type="entry name" value="CBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00686">
        <property type="entry name" value="NFYA_HAP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51152">
        <property type="entry name" value="NFYA_HAP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="152"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="17"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="170"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="184"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW31540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="206" mass="22898" checksum="5D6C12B7B116857A" modified="2014-02-19" version="1">MTSAHNLTDNEDDGQHQSESQVQSPSANGISDSGISTQNVNVQYATPGQLGAGHAMVPPVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHMHALRRPRGCGGRFLNSKKEENEHNDVASAEKSQSNINLNSDKNDQTSSDRTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR70</accession>
    <name>V7CR70_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G2734001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR70"/>
    <dbReference type="Gramene" id="ESW31848">
        <property type="protein sequence ID" value="ESW31848"/>
        <property type="gene ID" value="PHAVU_002G2734001g"/>
    </dbReference>
    <dbReference type="OMA" id="YFLNVPP"/>
    <dbReference type="OrthoDB" id="775087at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35770">
        <property type="entry name" value="U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AUXILIARY FACTOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35770:SF1">
        <property type="entry name" value="U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AUXILIARY FACTOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="83" mass="9424" checksum="B48BF6067D7532C7" modified="2014-02-19" version="1" fragment="single">QEHSARTNMLAAEKERNETIQLEQRQKFQKISDLENGVSTEGLQNSPDKQAARDGGSTKVKNRKVPAYRRTKVRGALLRDSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSG3</accession>
    <name>V7CSG3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G274600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSG3"/>
    <dbReference type="SMR" id="V7CSG3"/>
    <dbReference type="Gramene" id="ESW31861">
        <property type="protein sequence ID" value="ESW31861"/>
        <property type="gene ID" value="PHAVU_002G274600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="9031" checksum="EEF2C2401213C7F3" modified="2014-02-19" version="1">MHDRVHVPNKCPFQPFPFLWIFLLVIIIHSFFSLYLFYSLFFFSLYLFYQLMRQKYHPQKLCRKTMAIREAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSR0</accession>
    <name>V7CSR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G0518000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSR0"/>
    <dbReference type="Gramene" id="ESW33212">
        <property type="protein sequence ID" value="ESW33212"/>
        <property type="gene ID" value="PHAVU_001G0518000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCHTLAT"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000427">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF501">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="103"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="208"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="236" mass="26396" checksum="5F8F1CB94FE1535D" modified="2014-02-19" version="1" fragment="single">MQLTALTTTFSRLQLQVPLPPDTTKRRAAEQTCLALLRTCHTLATLTRIHALILKLGLHHNPLVLTKFASTASDLDAVHYAASVTFLDDQNDETTPRPRAFHDAFLFNTFIRAFAQTTHAKPRALRFYRAMLRHAVSPNKFTFPFVLKACAGLASLPLGMAVHSAVVKFGFEEDIHVRNTMIHMYCCCEEGSKPNSAQKVFEESPDRDLVTWSAMIGGYARTGNSTRAVSLFREMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSX0</accession>
    <name>V7CSX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dehydrin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G324800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSX0"/>
    <dbReference type="STRING" id="3885.V7CSX0"/>
    <dbReference type="Gramene" id="ESW32463">
        <property type="protein sequence ID" value="ESW32463"/>
        <property type="gene ID" value="PHAVU_002G324800g"/>
    </dbReference>
    <dbReference type="OMA" id="YDHRRTT"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030513">
        <property type="entry name" value="Dehydrin_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00823">
        <property type="entry name" value="DEHYDRIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="82" mass="8542" checksum="DF301EBD6B454950" modified="2014-02-19" version="1">MAQYQNQYGAVPISKDPVQKEMETTGDTIGVGVAGGGGGGSTQVIAEDYDSSKSNSSGEKQKKGIIEKIKEKLPGTGTHQDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTC5</accession>
    <name>V7CTC5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G065300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTC5"/>
    <dbReference type="SMR" id="V7CTC5"/>
    <dbReference type="STRING" id="3885.V7CTC5"/>
    <dbReference type="Gramene" id="ESW33389">
        <property type="protein sequence ID" value="ESW33389"/>
        <property type="gene ID" value="PHAVU_001G065300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WINVYIP"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="PhylomeDB" id="V7CTC5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000042">
        <property type="entry name" value="Flavanone 3-dioxygenase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="7">
        <location>
            <begin position="192"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="344" mass="38634" checksum="26DABE8B23CC5F38" modified="2014-02-19" version="1">MAEITSTITQSHSSQPKLNTSSQVTMVSHHNADPFSASDDDIPTVDYSLLFSDNPVQRFLALENLRQACQEYGFFYLVNHTIPDEVLDSILKGFSDFFDPKTIDERKVFRKSGPSDKIRWDLNSSAGENREYLKVIAHPQFHAPSKPSGIRKILEEYHKAMRNIVAGLAGAVSTTLGFEEKYIEKELNLKSGFDVMAMNLYPPNSRSKGVIGIPEHTDPGFVVTLVQDVDGGLQILSHQGNWINVYIPHHAILIQLGDHLEVLTNGKYKSHIHRVIVNKNKVPRISVVTLHGPELDKFISPAVEFVDEEHPQKYHGMTYKESLEANGGDDIDVQSSLEKLKIYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU11</accession>
    <name>V7CU11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histone chaperone domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G086900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU11"/>
    <dbReference type="STRING" id="3885.V7CU11"/>
    <dbReference type="Gramene" id="ESW33642">
        <property type="protein sequence ID" value="ESW33642"/>
        <property type="gene ID" value="PHAVU_001G086900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7QE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEDQADY"/>
    <dbReference type="OrthoDB" id="696786at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36899:SF3">
        <property type="entry name" value="F13K23.8 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36899">
        <property type="entry name" value="OS04G0395700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="192"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="201" mass="22083" checksum="F9EA7099F74CC8EC" modified="2014-02-19" version="1">MAEHNDPNEPTLPSKRKSDPDLQELPSKKLATPDLKETQEPEPNADHTTSQPPNPSSDPKELQNDDMDQKDLLNDDKELQNDVEDEDDEEEEEKEKEEEDRKGKRISRDDKGKAKMVEEDDDDEDDSDDDSDDDDSDDDGSDFSDDPLTEVDLNNILPSRTRGRTGAAANVGVRIPGNTGKAATATVGGLSDGDDSDDSDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV75</accession>
    <name>V7CV75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FLZ-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G056900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FLZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV75"/>
    <dbReference type="STRING" id="3885.V7CV75"/>
    <dbReference type="Gramene" id="ESW33273">
        <property type="protein sequence ID" value="ESW33273"/>
        <property type="gene ID" value="PHAVU_001G056900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33274">
        <property type="protein sequence ID" value="ESW33274"/>
        <property type="gene ID" value="PHAVU_001G056900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSHDNTQ"/>
    <dbReference type="OrthoDB" id="685855at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044585">
        <property type="entry name" value="FLZ10/11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007650">
        <property type="entry name" value="Zf-FLZ_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46868">
        <property type="entry name" value="FCS-LIKE ZINC FINGER 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46868:SF3">
        <property type="entry name" value="FCS-LIKE ZINC FINGER 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04570">
        <property type="entry name" value="zf-FLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51795">
        <property type="entry name" value="ZF_FLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="FLZ-type" evidence="5">
        <location>
            <begin position="339"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="FLZ-type" evidence="4">
        <location>
            <begin position="339"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW33273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="399" mass="44049" checksum="41B7011AD4E2B32E" modified="2014-02-19" version="1">MLRKRTRSIQKDQHQVCKMTISEANFESHALGSNAKSNSIFNAPLLFVGMGPKGLLDSDSVKSPTSPLDVSFFSNLSNPFRTPSSLSNEGQQRSWDCAKVGLSIIDSLEECSKFSQKILQASESKKTTLCPQIITKAPNCKPYMDMESAYASKSLPKGSCRIHCAQNGYIFPKDESTVLFEIGEAPPQHESFEKAVSVSLDSCSPIRNLSGLTCPNIDSDPENLALKHKCCPPHFIGGSHDNTQILLPAALNSNPVAAVSSNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFCDFILETHATDFKKHNKNGEEGKELSLFSVNSMYAPNHFPSSEDFLSFCHHCNKKLEEGKDIYIYRGEKAFCSLSCRAIEIMIDEELEKSDSDSSPENSPKMRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWM8</accession>
    <name>V7CWM8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Photosystem II reaction center Psb28 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G165200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="9">Part of the photosystem II complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Stromal side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 10">Belongs to the Psb28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWM8"/>
    <dbReference type="SMR" id="V7CWM8"/>
    <dbReference type="STRING" id="3885.V7CWM8"/>
    <dbReference type="Gramene" id="ESW34597">
        <property type="protein sequence ID" value="ESW34597"/>
        <property type="gene ID" value="PHAVU_001G165200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAFR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PAIMMAK"/>
    <dbReference type="OrthoDB" id="1938621at2759"/>
    <dbReference type="PhylomeDB" id="V7CWM8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009654">
        <property type="term" value="C:photosystem II oxygen evolving complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.220:FF:000001">
        <property type="entry name" value="Photosystem II reaction center Psb28 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.220">
        <property type="entry name" value="Photosystem II Psb28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01370">
        <property type="entry name" value="PSII_Psb28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038676">
        <property type="entry name" value="Psb28_c1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005610">
        <property type="entry name" value="PSII_Psb28_class-1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03047">
        <property type="entry name" value="PS_II_psb28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34963">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34963:SF2">
        <property type="entry name" value="PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03912">
        <property type="entry name" value="Psb28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 10" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="7 10" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0793">Thylakoid</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00060947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00062039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW34597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="20255" checksum="5B955223E7CAB234" modified="2014-02-19" version="1">MASSFYSLTFSSSLLKTLNNSPSSSVPSMIFHHSRHSSFTGQSVNLPRLRLSKLKQKTPKHMPAIMMAKPAIQFIKGTDEQTIPDVRLTTSRDGTNGMAIFNFDQPSVFDSSREVGDITGLYMVDEEGVLQSVDVSAKFVNGKPSGIEAKYVMRTPRDWDRFMRFMERYSDANGLQFIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWW4</accession>
    <name>V7CWW4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G166500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CWW4"/>
    <dbReference type="Gramene" id="ESW34614">
        <property type="protein sequence ID" value="ESW34614"/>
        <property type="gene ID" value="PHAVU_001G166500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0065">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QSKWYWI"/>
    <dbReference type="OrthoDB" id="245989at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03233">
        <property type="entry name" value="ABCG_PDR_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03232">
        <property type="entry name" value="ABCG_PDR_domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000179">
        <property type="entry name" value="ABC transporter G family member 34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000059">
        <property type="entry name" value="ABC transporter G family member 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029481">
        <property type="entry name" value="ABC_trans_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043926">
        <property type="entry name" value="ABCG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034001">
        <property type="entry name" value="ABCG_PDR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034003">
        <property type="entry name" value="ABCG_PDR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013581">
        <property type="entry name" value="PDR_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48040:SF20">
        <property type="entry name" value="PLEIOTROPIC DRUG RESISTANCE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48040">
        <property type="entry name" value="PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19055">
        <property type="entry name" value="ABC2_membrane_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14510">
        <property type="entry name" value="ABC_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08370">
        <property type="entry name" value="PDR_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="530"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="563"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="607"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="648"/>
            <end position="667"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="673"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="757"/>
            <end position="783"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1178"/>
            <end position="1196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1208"/>
            <end position="1228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1248"/>
            <end position="1279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1291"/>
            <end position="1308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1320"/>
            <end position="1340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1352"/>
            <end position="1371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="1401"/>
            <end position="1423"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="12">
        <location>
            <begin position="161"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="12">
        <location>
            <begin position="832"/>
            <end position="1084"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="794"/>
            <end position="822"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="794"/>
            <end position="805"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW34614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1432" mass="162256" checksum="DE8171C9DC89AFE3" modified="2014-02-19" version="1">MEEEGSVKAGSSLRAGSTMSSLRIGSVSVWRNSGVEIFANSFHQEDDEEALKWASIQKLPTMARLRTGLLTSPEGVANEIDVHQLGLQERRGLLERLVRVVEEDNEKFMLKLRDRIDRVGIAIPTIEVRFEHMSVGAEVHVGSRALPTFTNYMVNKVEGLLNFLHLLPSRKQHINILQDASGIIRPARMTLLLGPPSSGKTTLLLALAGRLDSKLKFNGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGEMTVRETMAFSARVQGVGPSYDLLREVSRREKEANITPDHDIDVYMKAVATEGQKANFITDYILRILGLEVCADTVVGNEMLRGISGGQRKRVTTGEILVGRPKALFMDEISTGLDSSTTFQVVNSLKHYIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYEGPREHVLEFFASVGFKCPERKGVADFLQEVTSRKDQEQYWVLRDQPYRFVTTKEFVEAFQSFHVGRSLDNELETQFDKYKSHPAALATQMYGLGKWELFKACFAREYLLMKRNSFLHIFQLCQLATVAFIAMTVLFRTEIHRDSVIDGGIYVGALFYGLLVIFLDGFADLTVTISKLPVFYKQRDFLFFPSWIYVLPGWILKLPMTFALVGIWVFLTYYVIGFDPYVGRLFRQFLLLLFVNQMASSLFRFIGALGRELTVGFTIGSFTLSILIAMSGFVLSKDNVKKWWLWGFWSSPMMYGQNALVNNEFLGKRWRHVLPNSTTPLGVEVLKSRGFFTQSKWYWIGVGALIGYTIVFNIFYILALTYLNPLVQHQAVKSEQSQSNAQDGGSSSTRSSSRRKETERRGMVLPFESHSITFEDVTYSVDMPLEMKNQGVIEDRLDLLKGVSGTFRPGVLTALMGSTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSAEINSETRKMFIEEVIELVELNPLKHSIVGLPGVNGLSTEQRKRLTIAVELVANPSLIFMDEPTSGLDARAAAIVIRAVRNIVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSSHLISYFEEIKGVNTVEDGYNPATWMLEVTTSAKEMELGIDFAEVYKNSELYRKNKETIKELCTPATGSKDLHFPRKYSRSFITQYMACLWKQHLSYWRNNQYTAQRFLFTIALALLFGSMYWDLGSKIKKPQDLFNAMGSMYVAVLLLGIKNAYSAQPLVAVERTVFYREKAAGMYSALAYAFAQVVIELPHVLLQSVVYSSIVYAMIGFEWTIAKFFWYLFFMYLTFLYFTYYGMMSAAMTPNPIIAVIFSSGIYEVWNLFAGFIIPRPRIPVWWRWYYWGNPVAWTLYGLVTSQYGDVQDLIEFNGKSTTVEDFLRNYFGFKHDFLGVVSAVLIVYAVTFACIYAIALKLFNFQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXW8</accession>
    <name>V7CXW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAD-dependent epimerase/dehydratase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G127100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXW8"/>
    <dbReference type="SMR" id="V7CXW8"/>
    <dbReference type="STRING" id="3885.V7CXW8"/>
    <dbReference type="Gramene" id="ESW34130">
        <property type="protein sequence ID" value="ESW34130"/>
        <property type="gene ID" value="PHAVU_001G127100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1371">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGTAGMK"/>
    <dbReference type="OrthoDB" id="494308at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05255">
        <property type="entry name" value="SQD1_like_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.25.10">
        <property type="entry name" value="UDP-galactose 4-epimerase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43000">
        <property type="entry name" value="DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="2">
        <location>
            <begin position="87"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="477" mass="53333" checksum="F45DCECBE8859456" modified="2014-02-19" version="1">MAQLLSSSYSLTICSRNKPYLKPFMQCSTPFSIAVSCKNSKPSSRGFFLQEQKLRKGSLVVHAAAVSTSPETPVQTSSGDPFRPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDSLVRRLFDHQLGLESLTPISSIQNRLQCWRSLTGKNIELYVGDICDFEFLSETFKTYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEDLYNRFDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLANLVTKAGEKLGLDVKTINVPNPRVEAEEHYYNCKNTKLVDLGLRPHFLSDSLLDSLLNFAVQYKDRVDTKQIMPSVSWKKIGVKTKTVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXX6</accession>
    <name>V7CXX6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">indole-3-pyruvate monooxygenase</fullName>
            <ecNumber evidence="9">1.14.13.168</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G202100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>indole-3-pyruvate + NADPH + O2 + H(+) = (indol-3-yl)acetate + CO2 + NADP(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34331"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17640"/>
            <dbReference type="ChEBI" id="CHEBI:30854"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.14.13.168"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Plant hormone metabolism; auxin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FMO family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.168" evidence="9"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXX6"/>
    <dbReference type="SMR" id="V7CXX6"/>
    <dbReference type="STRING" id="3885.V7CXX6"/>
    <dbReference type="Gramene" id="ESW35047">
        <property type="protein sequence ID" value="ESW35047"/>
        <property type="gene ID" value="PHAVU_001G202100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1399">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFMKVAY"/>
    <dbReference type="OrthoDB" id="66881at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103075">
        <property type="term" value="F:indole-3-pyruvate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009851">
        <property type="term" value="P:auxin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050982">
        <property type="entry name" value="Auxin_biosynth/cation_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000960">
        <property type="entry name" value="Flavin_mOase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539">
        <property type="entry name" value="FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539:SF42">
        <property type="entry name" value="OS01G0273800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13738">
        <property type="entry name" value="Pyr_redox_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000332">
        <property type="entry name" value="FMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00469">
        <property type="entry name" value="PNDRDTASEII"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0073">Auxin biosynthesis</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00039148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="385" mass="43377" checksum="CD51CA952A789EF3" modified="2014-02-19" version="1">MQEEEKVERVIVVGAGPSGLSAAACFTKHSIPYIILEREDCFASLWKKYSYDRLHLHLSKHFCQLPHKPFPPSFPQHVPKNQFLQYLDDYVSHFAIAPLYRRTVELAQYDDSRRFWKVEARNGDSGEVEKYCGRFLVVATGETSDPFVPEVEGLSSFPGKVIHSTRFSSGKEFKDKHVLVVGSGNSGMEIALDLINHGAKTSILVRSPVHFVSRGMVRLGLFLLKYLSLSSVDSLMVMLSTMVYGDVTKYGVRRPNEGPFYMKVEHGKYPVIDVGTYKKIKTQELKVLAAEIESVRGKDVLFKSGELHTFDSIVFCTGFKRSTTKWLKGDDYLLNDDGLPKPSYPIHWKGNNGLYCVGLSRRGLYGAAADAENIANDISFFMQHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0M8</accession>
    <name>A0ACC3P0M8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L008543</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="487" mass="54531" checksum="941558AA0C3B8167" modified="2026-01-28" version="1">MAKDRSSIFSFQYFCYVVIILSICSIILSLSWSHCCSQCHSPYQVTVTEKNPRINLLSYPSAWNHLVFSSEPPSKFLKIALFVRKWPHKSRAGGLERHALTLHLALAKRGHDLHIFTTSTDSSLSNSSIDHNLHFHFSKPTPAGYLDQASVWEQFQAQNSSGKPFDVVHTESVGLRYTRSRYVTNLAVTWHGIAYETFHSDIIQELLRTPQEPKTKALTERAVKVVEEVKFFPNYAHHVATSDHAGDILKRVYMIPEERVHIILNGVDQQVFRSDVSKGIEFKKRHGIPDSKSLVIGLAGRLVKDKGHPLMFEALKQIIAENSSFQESSMVVVAGDGPWGARYRDLGANVLVLGSLEQAELACFYNAIDIFANPTLRAQGLDHTLLEAMLTGKPVMATRLASIAGSVIVGNEMGYTFSPTVSDLKKAIYELWISGRDGLEKKGQVAMQRGLQLFTATKMAAAYERLFLCISSAMHENHFCEYQPPGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2001-12-01" modified="2026-01-28" version="124" xmlns="https://uniprot.org/uniprot">
    <accession>Q94KS2</accession>
    <name>Q94KS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Eukaryotic translation initiation factor 3 subunit I</fullName>
            <shortName evidence="7">eIF3i</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G070400g</name>
    </gene>
    <organism evidence="9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2001" name="Plant J." volume="26" first="35" last="45">
            <title>Expression of a plant gene with sequence similarity to animal TGF-beta receptor interacting protein is regulated by brassinosteroids and required for normal plant development.</title>
            <authorList>
                <person name="Jiang J."/>
                <person name="Clouse S.D."/>
            </authorList>
            <dbReference type="PubMed" id="11359608"/>
            <dbReference type="DOI" id="10.1046/j.1365-313x.2001.01007.x"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the WD repeat STRAP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the eIF-3 subunit I family.</text>
    </comment>
    <dbReference type="EMBL" id="AF335551">
        <property type="protein sequence ID" value="AAK49947.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="Q94KS2"/>
    <dbReference type="SMR" id="Q94KS2"/>
    <dbReference type="STRING" id="3885.Q94KS2"/>
    <dbReference type="ProMEX" id="Q94KS2"/>
    <dbReference type="Gramene" id="ESW29436">
        <property type="protein sequence ID" value="ESW29436"/>
        <property type="gene ID" value="PHAVU_002G070400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0643">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWFSHNG"/>
    <dbReference type="OrthoDB" id="24966at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016282">
        <property type="term" value="C:eukaryotic 43S preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033290">
        <property type="term" value="C:eukaryotic 48S preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071541">
        <property type="term" value="C:eukaryotic translation initiation factor 3 complex, eIF3m"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001732">
        <property type="term" value="P:formation of cytoplasmic translation initiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03008">
        <property type="entry name" value="eIF3i"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027525">
        <property type="entry name" value="eIF3i"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19877">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19877:SF1">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24805">
        <property type="entry name" value="EIF3I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-0675">Receptor</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 8" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="6"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="48"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="142"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="187"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="284"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="AAK49947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="35876" checksum="88070D02F812825F" modified="2001-12-01" version="1">MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELPSAIHVKRIANDPTEQTGDSVVLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKLIKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>T2DP40</accession>
    <name>T2DP40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">rRNA biogenesis protein RRP36</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G049100g</name>
    </gene>
    <organism evidence="8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="8">Pod</tissue>
        </source>
    </reference>
    <reference evidence="9" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Associates with 90S and pre-40S pre-ribosomal particles.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
            <location evidence="1 6">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the RRP36 family.</text>
    </comment>
    <dbReference type="EMBL" id="KF033600">
        <property type="protein sequence ID" value="AGV54587.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DP40"/>
    <dbReference type="SMR" id="T2DP40"/>
    <dbReference type="STRING" id="3885.T2DP40"/>
    <dbReference type="Gramene" id="ESW06452">
        <property type="protein sequence ID" value="ESW06452"/>
        <property type="gene ID" value="PHAVU_010G049100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06453">
        <property type="protein sequence ID" value="ESW06453"/>
        <property type="gene ID" value="PHAVU_010G049100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3190">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERKEMPW"/>
    <dbReference type="OrthoDB" id="448446at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030686">
        <property type="term" value="C:90S preribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000462">
        <property type="term" value="P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009292">
        <property type="entry name" value="RRP36"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21738">
        <property type="entry name" value="RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21738:SF0">
        <property type="entry name" value="RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06102">
        <property type="entry name" value="RRP36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 6" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="44"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="18"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="221"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AGV54587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="237" mass="28138" checksum="343E06C12007FC68" modified="2013-11-13" version="1">METQYEELAREDSIPDSSSEDEEEEIEKELADVTFEELQKARSNGAHAFFQKPKEDKKLKRANKNRPMEASSKKPVSAFREAIQAPKKVIRDPRFESLCGTLDPEGFRKRYNFLYENDLPAERQALKKELKKYKDPKRISEIEEHISWIDKQMKSDSRKNIDTQILAKHKKKEREAAKEGKRPFYIKKSEIRKQRLIEKYNNLKSSGKLEAFVEKRRRRNAAKDHRYMPYRRSGDVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ10</accession>
    <name>V7AJ10_PHAVU</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G129800g</name>
        <name evidence="2" type="ORF">PHAVU_011G130200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ10"/>
    <dbReference type="Gramene" id="ESW04844">
        <property type="protein sequence ID" value="ESW04844"/>
        <property type="gene ID" value="PHAVU_011G129800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW04848">
        <property type="protein sequence ID" value="ESW04848"/>
        <property type="gene ID" value="PHAVU_011G130200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1421970at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="105" mass="11907" checksum="6CAA58BFE08A9E8C" modified="2014-02-19" version="1">MEVFNTATIISDLGNKENVPPFCNSNVNKDKGKTPVPHIKSLSFKNKKRSTRKPKRLPLADVTNLFNNSATDVFNLSHHHHQQIGVSIIPKRTPSSSKTLRMRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ44</accession>
    <name>V7AJ44_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G133400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ44"/>
    <dbReference type="Gramene" id="ESW04883">
        <property type="protein sequence ID" value="ESW04883"/>
        <property type="gene ID" value="PHAVU_011G133400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5NK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MASNWID"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="128" mass="11515" checksum="0920F74E407319F7" modified="2014-02-19" version="1">MARHFVLVDGGDANRGEEGLVLHSPPILLFLMIIASLSMISIIIFACGDDNKNTKRRRGGKGGGGAGYGDGPRGDGGGVAGCDDGGGGNGGGGHAWGGGGGGGGGCGGGGAGGGGGGCGGGGGGGGGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJE5</accession>
    <name>V7AJE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfotransferase</fullName>
            <ecNumber evidence="3">2.8.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G199200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the sulfotransferase 1 family.</text>
    </comment>
    <dbReference type="EC" id="2.8.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJE5"/>
    <dbReference type="SMR" id="V7AJE5"/>
    <dbReference type="Gramene" id="ESW05664">
        <property type="protein sequence ID" value="ESW05664"/>
        <property type="gene ID" value="PHAVU_011G199200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DMINFFK"/>
    <dbReference type="OrthoDB" id="205623at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11783">
        <property type="entry name" value="SULFOTRANSFERASE SULT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulfotransferase" evidence="4">
        <location>
            <begin position="58"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="37486" checksum="F350D6120F0959A2" modified="2014-02-19" version="1">MAFPIQKQENEENDLSLSLPKESGLGGAPYLHLFQDFWCPTVHVQGVNNFQKHFDAKDNDVFVASFPKSGTTWLKALAFVIVNHHRFPSFDHHPLLSSNPHQLVSFPEFILSHDLHDNILSLSNMSEPRVLGTHLPFPSLPESITKSNCKIIYICRNPFDIFVSAWEFFPKLKLVSLPALTFEETFEKYCNGIMTFGPWWSHMLGYWKESIARPNKVLFLKYEDLKENSVFHVKRIVEFLDSPIIQGGDSNEVIENIVNLCEFEKMKNLEVNKSGYIENITEKKNLFQKGKIGDWINYFSPSMIEKLSKIIEEKLSGSGLSFKVHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJL1</accession>
    <name>V7AJL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G208700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJL1"/>
    <dbReference type="SMR" id="V7AJL1"/>
    <dbReference type="MEROPS" id="A01.069"/>
    <dbReference type="Gramene" id="ESW05777">
        <property type="protein sequence ID" value="ESW05777"/>
        <property type="gene ID" value="PHAVU_011G208700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CDGHSCP"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05476">
        <property type="entry name" value="pepsin_A_like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000050">
        <property type="entry name" value="Aspartic proteinase CDR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000016">
        <property type="entry name" value="Probable aspartic protease At2g35615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034161">
        <property type="entry name" value="Pepsin-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051708">
        <property type="entry name" value="Plant_Aspart_Prot_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967:SF66">
        <property type="entry name" value="ASPARTIC PROTEINASE CDR1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967">
        <property type="entry name" value="OS07G0603500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753800" description="Peptidase A1 domain-containing protein" evidence="9">
        <location>
            <begin position="23"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="10">
        <location>
            <begin position="87"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW05777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="46974" checksum="BAA20406B203749F" modified="2014-02-19" version="1">MSHYSSLVLLLLCFCRLYSLEALNGGFSVEMIHRDSPKSPFYNSTETQFQRISNALSRSIIRANHFNKSLVSANTPQAPVTSAKGEYLMSYEIGTPPIQVYGIVDTGSDITWLQCEPCQTCFKQTTPIFDPSKSKTYKNISCNAKPCRFVQGTCPKPTTSSCQYSISYGDGSYSEGDLSLETITLNSTNGSPFKIPSTVIGCAQNNHLAFELGGSGIVALGNSPVSLANQMGPSIGGKFSYCLVPILSPPSISSKLNFGNAAVVSGSGTVSTPFYSREPEEFYYLYLEAISVGSKRIEVGSTSARAGGKGNIVIDSGTTVTFLPNDAYSKLESAVAKEVKLQPAKDPNHVLSLCYKAAKSDKLDVPVMTAHFTGADVLLHGSSTFMKVADGVVCLAFVPTLSTPIFGNLAQQNVLVGYDLEKKTVSFKLVDCIAQNND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALC2</accession>
    <name>V7ALC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SUI1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G138900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Probably involved in translation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SUI1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALC2"/>
    <dbReference type="STRING" id="3885.V7ALC2"/>
    <dbReference type="Gramene" id="ESW04946">
        <property type="protein sequence ID" value="ESW04946"/>
        <property type="gene ID" value="PHAVU_011G138900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1770">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEFMITQ"/>
    <dbReference type="OrthoDB" id="10248435at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11566">
        <property type="entry name" value="eIF1_SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.780.10:FF:000001">
        <property type="entry name" value="Eukaryotic translation initiation factor SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.780.10">
        <property type="entry name" value="SUI1-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001950">
        <property type="entry name" value="SUI1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036877">
        <property type="entry name" value="SUI1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005874">
        <property type="entry name" value="SUI1_euk"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01160">
        <property type="entry name" value="SUI1_MOF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10388">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01253">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004499">
        <property type="entry name" value="SUI1_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55159">
        <property type="entry name" value="eIF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50296">
        <property type="entry name" value="SUI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="SUI1" evidence="6">
        <location>
            <begin position="31"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="113" mass="12576" checksum="D00319DFBC313CD1" modified="2014-02-19" version="1">MSELDAQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQAGIVKKEHIKIHGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM77</accession>
    <name>V7AM77_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Vacuolar protein sorting-associated protein 11 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G042100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Core component of at least two putative endosomal tethering complexes, the homotypic fusion and vacuole protein sorting (HOPS) complex and the class C core vacuole/endosome tethering (CORVET) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Vacuole membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Prevacuolar compartment membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the VPS11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM77"/>
    <dbReference type="STRING" id="3885.V7AM77"/>
    <dbReference type="Gramene" id="ESW06365">
        <property type="protein sequence ID" value="ESW06365"/>
        <property type="gene ID" value="PHAVU_010G042100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2114">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENENECP"/>
    <dbReference type="OrthoDB" id="26184at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033263">
        <property type="term" value="C:CORVET complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030897">
        <property type="term" value="C:HOPS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009705">
        <property type="term" value="C:plant-type vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030674">
        <property type="term" value="F:protein-macromolecule adaptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007032">
        <property type="term" value="P:endosome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048284">
        <property type="term" value="P:organelle fusion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007033">
        <property type="term" value="P:vacuole organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006904">
        <property type="term" value="P:vesicle docking involved in exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd16688">
        <property type="entry name" value="RING-H2_Vps11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000278">
        <property type="entry name" value="Vacuolar protein sorting-associated protein 11 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001655">
        <property type="entry name" value="Vacuolar protein sorting-associated protein 11 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057308">
        <property type="entry name" value="CHCR_PEP5_VPS11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000547">
        <property type="entry name" value="Clathrin_H-chain/VPS_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016528">
        <property type="entry name" value="VPS11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024763">
        <property type="entry name" value="VPS11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23323">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23323:SF24">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 11 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23356">
        <property type="entry name" value="TPR_PEP5_VPS11"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12451">
        <property type="entry name" value="VPS11_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23266">
        <property type="entry name" value="VPS11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007860">
        <property type="entry name" value="VPS11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50236">
        <property type="entry name" value="CHCR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0926">Vacuole</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="repeat" description="CHCR" evidence="9">
        <location>
            <begin position="400"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="repeat" description="CHCR" evidence="9">
        <location>
            <begin position="566"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="857"/>
            <end position="892"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="814"/>
            <end position="848"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR007860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW06365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="961" mass="108902" checksum="24B2CBACFA7BD72F" modified="2014-02-19" version="1">MYQWRKFEFFEEKYGAKCSVPEGDDGDDVVREKKIECCSSGRGKVVTGFDDGVVCFFDRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGGDEQLTPQQSALCLKVFDLDKMQPESSSTTSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGSIYCIKGDIARERITRFRLQVENNQSDKTLSAITGLGFKVDGQSLQLFAVTPSSVSLFSLHNQPPRRQTLDQIGCGVNSVAMSERSELIIGRPEAVYFYEIDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKHTFNIYDLKNRLIAHSALVKEVSHMLYEWGNIILIMNDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLSLFIKSDDSIGELKFDVETAIRVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYGKILIEHKPVETIQILIRLCTEDGDRGRSNGVYMSMLPSPVDFLSIFIHHPQSLMDFLEKYTNKVNDSPAQVEIHNTLLELYISNELNFPSMSQVNDGGNYLNGVSTKTMSVQSNGSTADHKSSAHGKDCLERHKKGLHLLKSAWPPETEHPQYDVDLAIILCEMNAFKDGLLYIYEKMKLYKEVIACYMQAHDHEGLIACCQRLGDSVKGGDPSLWADVLKYFGELGEDCSKEVKEVLTYIERDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLERESKMIEEDRQAIDKYQEDTLSMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSVLEMKRNLEQNSKDQDRFFHQVKSSKDGFSVIAEYFGKGIISKTSNGSTSGPRSGTASSTSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMR9</accession>
    <name>V7AMR9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G058200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMR9"/>
    <dbReference type="STRING" id="3885.V7AMR9"/>
    <dbReference type="Gramene" id="ESW06564">
        <property type="protein sequence ID" value="ESW06564"/>
        <property type="gene ID" value="PHAVU_010G058200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06565">
        <property type="protein sequence ID" value="ESW06565"/>
        <property type="gene ID" value="PHAVU_010G058200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0594">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10252171at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46699">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46699:SF1">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="12000" checksum="849BEAD50C82A537" modified="2014-02-19" version="1">MYSAGIVLLQMAIPSLRSSAALKNFNLELKNCGFDLKKWRDYTRSRPDFQILDSESGRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN94</accession>
    <name>V7AN94_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ammonium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G073700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cell membrane</location>
            <topology evidence="1 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN94"/>
    <dbReference type="SMR" id="V7AN94"/>
    <dbReference type="STRING" id="3885.V7AN94"/>
    <dbReference type="Gramene" id="ESW06755">
        <property type="protein sequence ID" value="ESW06755"/>
        <property type="gene ID" value="PHAVU_010G073700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0682">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TEHGWHT"/>
    <dbReference type="OrthoDB" id="534912at2759"/>
    <dbReference type="PhylomeDB" id="V7AN94"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3430.10:FF:000005">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="entry name" value="Ammonium transporter AmtB like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002229">
        <property type="entry name" value="RhesusRHD"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00836">
        <property type="entry name" value="amt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029:SF39">
        <property type="entry name" value="AMMONIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029">
        <property type="entry name" value="AMMONIUM TRANSPORTER MEP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00342">
        <property type="entry name" value="RHESUSRHD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111352">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="24"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="127"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="161"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="228"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="260"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="291"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="315"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="401"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium transporter AmtB-like" evidence="11">
        <location>
            <begin position="24"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW06755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="486" mass="52253" checksum="A0A33585645358C2" modified="2014-02-19" version="1">MAIAPAYEEHLPASPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGDKLLPFWGKGAPALGQKFLINQAKVPETTHHFKNGTVESKKSEPLFAMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLVFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDASIAVLNTNICAATSLLVWTSLDVIFFSKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWMTMMILHKKSSLLQKVDDALGVFHTHAVAGLLGGLLTGLLAEPELCSLILPVSNSRGAFYGGSGGVQFLKQLVAACFITGWNLVSTTLILLAIQFFIPLRMPDDQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSSIVDKTSPSPYVHGARGLTIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANG0</accession>
    <name>V7ANG0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G081200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANG0"/>
    <dbReference type="SMR" id="V7ANG0"/>
    <dbReference type="STRING" id="3885.V7ANG0"/>
    <dbReference type="Gramene" id="ESW06840">
        <property type="protein sequence ID" value="ESW06840"/>
        <property type="gene ID" value="PHAVU_010G081200g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="97" mass="11362" checksum="56FDBC63CD2AF5F8" modified="2014-02-19" version="1">MQAMYSSVARELKTTQLTDEHPQDYLNFYSLSNREDFNEESSSTWCTALTYESIYASDRNAEVQLGQEYGPKPKIWRVYERKNKRGVKRNDVALNQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANJ5</accession>
    <name>V7ANJ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G104300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANJ5"/>
    <dbReference type="SMR" id="V7ANJ5"/>
    <dbReference type="Gramene" id="ESW07134">
        <property type="protein sequence ID" value="ESW07134"/>
        <property type="gene ID" value="PHAVU_010G104300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IYECHEM"/>
    <dbReference type="OrthoDB" id="1747797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00267">
        <property type="entry name" value="ABC_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF196">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="5">
        <location>
            <begin position="174"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="984" mass="112635" checksum="1912F018FB8B27F9" modified="2014-02-19" version="1">MEFLDKVVDVVIDFVWKHGVRQVTYIIHYKKNVHELKDSVRDLGFEKERIDHQCDEVAKNLNNIEGKVTEWVKKVSEIKTIVEEFENDDGHQRAQSLNCYVFPYLWNRHRLGRQAKKMEKDVKMIIDESPKSDEVSYRQGVTSNEVTLSNSVFVEFGSTKSIMEAVMTQLEDSTVRMIGLYGPGGVGKSTLIKEIARKAKYKKLFDVVVNVEITANPNLQKVQEEIAYVLGLRLEGEGENMRADCLRRRLKREKGNTLLILDDLLDKLDLNKLGILLIDDNDDDLSNDNMDLNRQKLGKKDDKDLNRKVLKKEKIIGVYKGCKILLTSRDKNVLCVKMDVKSTFCVKELDDKDALMLFQKLVGIHNEMSGSKQEIVKYCGGLPMAIVTVARALKSKSESVWEATLEKLKKEELVGSQTSMDISVKMSYDHLENEEIKSIFLLCAQMGHQPLIMNLMKYCFGLGILEGVSSLWEARDRIKTSIQKLKDSGLLLNGSSNNNFNMHDVVRDAALSIAHNDHNSFTLRNGKLDDWPELEKCTSISICNSDIIDGLPEVINCPQLKLFQIDTNDPSLEIPESFFRTMKNLRVLILIGFRVSSLPYSIQCLLKLRMLCLDRCTLGCNLSILGKLKKLRILSFSGSQIKNLPAELRSLNKLRLLDISDCSELKIIPPNLISSLTCLEELYIRESLIKMLREAKKGQDLFLSELENLHKLKVVDLSVPCVSVFPNHLFFDKLKDYKIVIGDLEFFSVGEFRMLDKYETFRVLALQLKDDIEIHSHESIKLLFKTVQSLLLGKINGVQKVVNQLNMDGFSDLKHLSIINNYDIKYVNSTELYNYVNMICYGPVTVVSFAKLKFIKVEMCYQLRNLYSLFMVKFPISAQTCEISECNSYMDKFLANLETIEVSECRSFKEILQISMHCGKVEFLKLHTLTLRQLPSFTCFYTKEKESSLSCLTEFQTTNRGYRETTSEKDGQSEKTIPLFGDLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANK3</accession>
    <name>V7ANK3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G085400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANK3"/>
    <dbReference type="SMR" id="V7ANK3"/>
    <dbReference type="STRING" id="3885.V7ANK3"/>
    <dbReference type="Gramene" id="ESW06895">
        <property type="protein sequence ID" value="ESW06895"/>
        <property type="gene ID" value="PHAVU_010G085400g"/>
    </dbReference>
    <dbReference type="OMA" id="EYCITIR"/>
    <dbReference type="OrthoDB" id="1436406at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050907">
        <property type="entry name" value="SRSF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23147">
        <property type="entry name" value="SERINE/ARGININE RICH SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="4"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="83"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW06895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="29576" checksum="47BB143AFBC6F4B2" modified="2014-02-19" version="1">MADTSFFFTNFTEHFMERDLWKVFQRWGRVLDVFVSRKLNARNQKFGFVRFQGVNDVFSLERELDAIWIGTWKLQVNLPKYQRKDGPRKQRNEGSRLGWNPKLNITHPREVGGAKGKQMEQFSFAQVVSEGVAKNGTGENASSSLGDELAYQITVEVKQDSWLEGSFVGCFKEIPCLQVIKESFVMGGFSLVKLRYLGGRFVLLSCDEGGSLRKIIADNRSWFDEVFSTVSPWDGSFVLKERCAWIRCRGIGGRGGGGVGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANM5</accession>
    <name>V7ANM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BAG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G1074000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANM5"/>
    <dbReference type="STRING" id="3885.V7ANM5"/>
    <dbReference type="Gramene" id="ESW07169">
        <property type="protein sequence ID" value="ESW07169"/>
        <property type="gene ID" value="PHAVU_010G1074000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRHM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSERVNQ"/>
    <dbReference type="OrthoDB" id="787121at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="231"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="287"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="236"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="261"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="290"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="328"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="366"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="386"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="411" mass="46643" checksum="CF4C296AE11E8913" modified="2014-02-19" version="1" fragment="single">MMPIRSMDSYPYQRNQMPFPQYYHPGIEAFPPQMKVDPSKPHLSYDQRWPCAGNYGHPIPPHFCCGHNNFPCNYSYMPSYPHAPSPMYYSGGCPAYSEPYFVPFSPQPHHTMELPRYEYDKYMPRDHHCCGCPNHSCNSKEGRSVKIEEHEPDVGRKVNDSLVPIQLNNYPYPFVLIPQEYTSNKQLKNPNTMEVCEQNKPPSVESSNAVAQPAQEPRVWNGWLPFDIKGAPSMIHDGHDGIRNQKQESGNNGGESEDGEMDQKRQSEQKRSEFPFPVFWLPYYNKLESGDTNNQEKNTSSTKIIEEVPRATKSVPVKSNVDEGGRNGTRSNEVAHSDTNASDVAEKVTKARSIPVKQIGKNVSLDQKEESVTKKDSRTDDKKRQSASSPKASKLPPVCLRVDPIPRKRNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATC0</accession>
    <name>V7ATC0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="25">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_009G083800g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="17 18">Belongs to the helicase family. Dicer subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7ATC0"/>
    <dbReference type="STRING" id="3885.V7ATC0"/>
    <dbReference type="Gramene" id="ESW08897">
        <property type="protein sequence ID" value="ESW08897"/>
        <property type="gene ID" value="PHAVU_009G083800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0701">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRKNHAY"/>
    <dbReference type="OrthoDB" id="6513042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004525">
        <property type="term" value="F:ribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010267">
        <property type="term" value="P:ta-siRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd18034">
        <property type="entry name" value="DEXHc_dicer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00593">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd18802">
        <property type="entry name" value="SF2_C_dicer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1520.10:FF:000008">
        <property type="entry name" value="Dicer-like 104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.260.10:FF:000004">
        <property type="entry name" value="Dicer-like 104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1520.10:FF:000004">
        <property type="entry name" value="Endoribonuclease dicer-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.380:FF:000001">
        <property type="entry name" value="Endoribonuclease dicer-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000420">
        <property type="entry name" value="Endoribonuclease dicer-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000705">
        <property type="entry name" value="Endoribonuclease dicer-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.380">
        <property type="entry name" value="Dicer dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.260.10">
        <property type="entry name" value="paz domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1520.10">
        <property type="entry name" value="Ribonuclease III domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038248">
        <property type="entry name" value="Dicer_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005034">
        <property type="entry name" value="Dicer_dimerisation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003100">
        <property type="entry name" value="PAZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036085">
        <property type="entry name" value="PAZ_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000999">
        <property type="entry name" value="RNase_III_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036389">
        <property type="entry name" value="RNase_III_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14950">
        <property type="entry name" value="DICER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14950:SF46">
        <property type="entry name" value="ENDORIBONUCLEASE DICER HOMOLOG 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03368">
        <property type="entry name" value="Dicer_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02170">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00636">
        <property type="entry name" value="Ribonuclease_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00949">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00535">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101690">
        <property type="entry name" value="PAZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69065">
        <property type="entry name" value="RNase III domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51327">
        <property type="entry name" value="DICER_DSRBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50821">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00517">
        <property type="entry name" value="RNASE_3_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50142">
        <property type="entry name" value="RNASE_3_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="10" id="KW-0347">Helicase</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-0539">Nucleus</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="13 18" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="14" id="KW-0943">RNA-mediated gene silencing</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="22">
        <location>
            <begin position="45"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="23">
        <location>
            <begin position="386"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="domain" description="Dicer dsRNA-binding fold" evidence="24">
        <location>
            <begin position="573"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="domain" description="PAZ" evidence="21">
        <location>
            <begin position="883"/>
            <end position="1005"/>
        </location>
    </feature>
    <feature type="domain" description="RNase III" evidence="20">
        <location>
            <begin position="1030"/>
            <end position="1202"/>
        </location>
    </feature>
    <feature type="domain" description="RNase III" evidence="20">
        <location>
            <begin position="1243"/>
            <end position="1386"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="19">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00035116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS51327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW08897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1667" mass="186982" checksum="0D238B6C04842481" modified="2014-02-19" version="1">MNLNNDSPGHNQTQSKKRKQLDADNSPYLELSNSNMNPRRYQVEVFQVAWRRNTIAVLDTGSGKTLIAVMLMKEVGQTIKTLAVKKLIVFLAPTVHLVNQQFNNIKYLTDFQVEEYYGAKGVDTWTLKTWEKEISSNDVLVMTPQILLDALRKAFLRMEMICLIVIDECHRATGNHPYTKIMKEFYHQANEKPKIFGMTASPVGKKGVSSSTDCEDQISELESILDAKRYTIEDRTEMDGYILSAQESCRYYDQARFSALSLKPKIEALWFKFDALLSENKSNYVDVENKFKTLSQRMSNELGKILHCLEDLGILCAYEAVKICHENFSKTEGMCEIYRTCYLQCITFVEEVIKLIEESLHLADKNILGVDFDYSKAEDMGYISPKLLELIKIFQSLGESSQVVCLIFVDRIITAKVIEGFAKKVPQISHFSVSYLTGNNTSVDAVAPKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRNQLFDIIRSERSMTDASMNKDHESSLRVCTMGKTEAYYVESTGASVTLDSSVNLIHRYCGTLPRDQYSSAKPSYVFLPVEGGYQCKLTLPSNSALQTIIGPSGKDIRLARHLACFEACKKLHQMGALNEHLVPLIENHSEDDHIVKNKESSSGAGTTKRKELHGTANIRALNGAWGDKLDDAARFFAYKLEFACSIVSEIYSGFVLLIESKLDDDVGNIDSDLYLVSKTVKASVSPCGQVDLDAKQMMKAKCFHELFFNGLFGRLVFRSKSAGGGTEFLLQKDTKSLWREKHLYLLLPLEKLNGICGGAFQINWHGISSCASAIEFLRRKFSLGTGDCDDNGIITSPQDTSSMEIEYVGTNKIHFANCVVDADNIKDTLVLAIHTGKIYCIIDIDSNLSAESPFCEKSKDHVTFSDYFSKRYGITLRHPRQSLLLLKQSHNPHNLLFNFHEEDGRDKSSQIGSTTSKVPAHVHVPPELLFVLDFQRNVLRSLYLLPSLMYRIESLMLSSQLREEIDGQTSKSNINSSLILEALTTLRCSESFSMERLELLGDSVLKYVVSCHLFLKYPKKHEGQLSTRRSLAVCNSTLHKLAIDRKLQGYIRDSAFEPRRWVAPGQRSLHPVCCDCGLDTLEVPLDVKFHTEDPKVVVGKFCDRGHRWMCSKTIADCVEALIGAYYVGGGLFASLNVMKWLGIGTELELSLVDEAITAASLHSCVLKESEIECLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYAKAISESDPRSHPSIRAPKALGDLVESIVGALLIDTKLSLDQVWEVFCPLLSPIVTPEKLELPPYRELNELCDSLGYFVKVNENCEKKGSMVHVEVSVQLLNDLLVREGKGVNKKTAKGEASFHLLKDLEKRGISYCNFMSKGKRDNSVHMTDSPHLKRDSSTCFTLIEEHSSEPVIKRNRLDGTNPTESILPLKDSSNDDSGFSASIPVNLSINMKKGGPRTTLFEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQGTKGLNCFVSKITLCIPKYGNIECQGEARSDKKSSFDSAAVEMLLELQKLGKVEIDPPLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU79</accession>
    <name>V7AU79_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G082700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU79"/>
    <dbReference type="Gramene" id="ESW08885">
        <property type="protein sequence ID" value="ESW08885"/>
        <property type="gene ID" value="PHAVU_009G082700g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="100" mass="11808" checksum="6C51837E0B8867B6" modified="2014-02-19" version="1">MGLWVKRIDQLGFKKIGLEHQKVMEVGSCKQEEAVMVEAERGGFHRLEGSLSLAAEDDCLRKVTCHYHYGRLSWWWYTEECMWQYLCYCSSFSSEMREGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUN7</accession>
    <name>V7AUN7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Homeobox domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G094300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUN7"/>
    <dbReference type="SMR" id="V7AUN7"/>
    <dbReference type="STRING" id="3885.V7AUN7"/>
    <dbReference type="Gramene" id="ESW09030">
        <property type="protein sequence ID" value="ESW09030"/>
        <property type="gene ID" value="PHAVU_009G094300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV0N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRIVKWF"/>
    <dbReference type="OrthoDB" id="514822at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002229">
        <property type="term" value="P:defense response to oomycetes"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009682">
        <property type="term" value="P:induced systemic resistance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009867">
        <property type="term" value="P:jasmonic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009787">
        <property type="term" value="P:regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000071">
        <property type="term" value="P:regulation of defense response by callose deposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000022">
        <property type="term" value="P:regulation of jasmonic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010118">
        <property type="term" value="P:stomatal movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15467:SF9">
        <property type="entry name" value="HOMEOBOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15467">
        <property type="entry name" value="ZINC-FINGERS AND HOMEOBOXES RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 5 6" id="KW-0371">Homeobox</keyword>
    <keyword evidence="4 5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Homeobox" evidence="8">
        <location>
            <begin position="263"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="5">
        <location>
            <begin position="265"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="136"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="337" mass="37879" checksum="5C0F70E007F342DE" modified="2014-02-19" version="1">MSAAFQCLWGAPTEPFLVPVQSLTLPFHRKPFFCSVPHYSPARNLSSVIVAASSKKKKNKKKLSRHHVTEGGEEDMDAFELLFKQLEQDLKRGDLSDDDGEGGITEEEMALLERELDNALGDFDSELLNSDVIDIELGSDPENDGNGDGGEGEGEGEGEDGDEKQLNLKNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLREPPPDLLMMSLTIPDEPTTTVVSLETKPSEILLQEISIDQTESEPKANVPIHTLQRNWDAQKRLKKAHVDTLERVYRRSKRPTDAMISSIVHVTNIPRKRVVKWFEDKRVEEGVPDHRLPYQRSVPETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYD4</accession>
    <name>V7AYD4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G198000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYD4"/>
    <dbReference type="SMR" id="V7AYD4"/>
    <dbReference type="STRING" id="3885.V7AYD4"/>
    <dbReference type="Gramene" id="ESW10305">
        <property type="protein sequence ID" value="ESW10305"/>
        <property type="gene ID" value="PHAVU_009G198000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1305">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQKISHW"/>
    <dbReference type="OrthoDB" id="28208at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031090">
        <property type="term" value="C:organelle membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015179">
        <property type="term" value="F:L-amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF571">
        <property type="entry name" value="TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="120"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="162"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="200"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="330"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="369"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="393"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="427"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="42"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="30"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW10305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="461" mass="49847" checksum="399CE94C9C5B4119" modified="2014-02-19" version="1">MSHANSVGIGRKEVVEEEESASALPLLGSGERDGDGSESKSKASVSGSVFNLSTTIIGAGIMALPAAIKIVGVCVGVAAVIFLAFLTHTSLEILLRFSRVAKASTYAHLMGDAFGSSGTLLFHVSVLINNFGILVVYVIIIGDVLSGTSSSGVHHFGVLEGWFGQGFWTTRAFVLLLTTLFVFAPLAFFKRIDSLRHTSALAVALAIVFLLITAGITFFKLFNGSIASPRMLPNITDVSSIWNLFTAVPVLVTAFVCHYNVHTIENELGDPSLMQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSSRSLDLDNRRFVLITIGLVTLIYVAAIFLPSIWNVFQFTGATATVCLGFIFPSAISIRDPHGIATKKDKILSIVMIFLAVFSNAVAIYSNADALFRKQVDPHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYE0</accession>
    <name>V7AYE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G112100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex. May be involved in lateral roots and nodules formation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYE0"/>
    <dbReference type="STRING" id="3885.V7AYE0"/>
    <dbReference type="Gramene" id="ESW09246">
        <property type="protein sequence ID" value="ESW09246"/>
        <property type="gene ID" value="PHAVU_009G112100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQAVNSY"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48017">
        <property type="entry name" value="OS05G0424000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="11" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="173"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="266"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="305"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="391"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="430"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="14">
        <location>
            <begin position="19"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00045588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW09246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="464" mass="51125" checksum="CCCED81BED72E1B5" modified="2014-02-19" version="1">MDVERDPSRLDDDGRVKRTGNLFTATTHIITVVVGAGVLALAWAMAQLGWIPGIITMLIFASVSLYTYNIIADCYRFPDPITGKRNYSYMQAVNSYLGGTMHVFCGSILYGKLAGVTVGYSITGSLSLVAIKKAICFHRKGHDAYCKFSNNPYMIGFGILQVFLSQIPDFHKLTWLSTLAAATSFGYAFIGSGLSLATVIQGNGQPTHLFGKKIGPDQSESEKIWKIFSALGNIALASHFATVIYDIMDTLRSDSPENKQMKSANVSGITTMTILFLLCGGLGYAAFGDGTPGNILTGFGFYEPYWLVALGNVFIVIHMVGAYQVMAQPLFRVIEMGANMAWPSSDFINKGYPIKMGFLSCHVNFFRLIWRTAYVIVATVLAMAMPFFNEFLALLGAVGFWPLIVFFPVQMHIAQKQIKRLSLKWCMLQLLSFVSFLVTAAAATASIRGISKNITKYKLFMYKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYW7</accession>
    <name>V7AYW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF7894 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G214800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYW7"/>
    <dbReference type="STRING" id="3885.V7AYW7"/>
    <dbReference type="Gramene" id="ESW10500">
        <property type="protein sequence ID" value="ESW10500"/>
        <property type="gene ID" value="PHAVU_009G214800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWQP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TQEPWRA"/>
    <dbReference type="OrthoDB" id="1927925at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057216">
        <property type="entry name" value="DUF7894"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37221">
        <property type="entry name" value="OS02G0582400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37221:SF1">
        <property type="entry name" value="OS02G0582400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25428">
        <property type="entry name" value="DUF7894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7894" evidence="1">
        <location>
            <begin position="1"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="240" mass="26776" checksum="16F773963C251826" modified="2014-02-19" version="1">MKVAPVVVFLFRDSEGFAAAILQALHPNTSSSFTRREDTFDHSLEPYGIKHLKASGSVSHFVDEHGAYMVSIVAMEHYEPPVLACALNEVLNKITADKSSLPTLLVPFLVESSKVKGKIKHLGSDESKPLIFGIPIGQNTDIMQALLNKTQELPSSSWIQHEIFASFLHFVRVMQLPTFFLIGQTSQYLDDQSTKQHEIIHAIGEILASTTGLQFSEDRVVWNPKKKSVQSKEPWQALYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYX4</accession>
    <name>V7AYX4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Replication factor C C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G1281001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYX4"/>
    <dbReference type="STRING" id="3885.V7AYX4"/>
    <dbReference type="Gramene" id="ESW09446">
        <property type="protein sequence ID" value="ESW09446"/>
        <property type="gene ID" value="PHAVU_009G1281001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0989">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHIIVEA"/>
    <dbReference type="OrthoDB" id="4199794at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.272.10:FF:000016">
        <property type="entry name" value="Replication factor C subunit 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.272.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013748">
        <property type="entry name" value="Rep_factorC_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08542">
        <property type="entry name" value="Rep_fac_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="post-AAA+ oligomerization domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Replication factor C C-terminal" evidence="1">
        <location>
            <begin position="22"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="13445" checksum="002E9F7A2458025F" modified="2014-02-19" version="1" fragment="single">SAARLFGSSISSENLISVSGVVPEKVVQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMQAFSNMPEGFAYEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B031</accession>
    <name>V7B031_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Late embryogenesis abundant protein Lea5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G249500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B031"/>
    <dbReference type="STRING" id="3885.V7B031"/>
    <dbReference type="Gramene" id="ESW10920">
        <property type="protein sequence ID" value="ESW10920"/>
        <property type="gene ID" value="PHAVU_009G249500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S70H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THANKEI"/>
    <dbReference type="OrthoDB" id="1693956at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004926">
        <property type="entry name" value="LEA_3a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509">
        <property type="entry name" value="LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509:SF34">
        <property type="entry name" value="LATE EMBRYOGENIS ABUNDANT PROTEIN 41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03242">
        <property type="entry name" value="LEA_3a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW10920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="94" mass="9949" checksum="02A3B4328A55D670" modified="2014-02-19" version="1">MAQSISQAKRALAFALNRRGYAVASDVSSFTSAARGGMSGIEKGVAKNGSGPSGASSAWVPDPVTGYYRPINHREEIDPVELRKMLLNHKGKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0B8</accession>
    <name>V7B0B8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G256900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0B8"/>
    <dbReference type="Gramene" id="ESW11000">
        <property type="protein sequence ID" value="ESW11000"/>
        <property type="gene ID" value="PHAVU_009G256900g"/>
    </dbReference>
    <dbReference type="OMA" id="RIMAMIE"/>
    <dbReference type="OrthoDB" id="1431160at2759"/>
    <dbReference type="PhylomeDB" id="V7B0B8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="14"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="100" mass="10780" checksum="7CCEDCA5B6FED96F" modified="2014-02-19" version="1">MGDLMQRIMELIQAEQAGKGSSNNGTSNAFNNHGSGPQDFKGATINSGQNAGNRNRINHSEHFDEQVFNNSGTFNGNGNGGTIKGGFNASKNNHYVPRYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0C0</accession>
    <name>V7B0C0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Cytochrome P450 734A1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_009G199200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0C0"/>
    <dbReference type="SMR" id="V7B0C0"/>
    <dbReference type="STRING" id="3885.V7B0C0"/>
    <dbReference type="Gramene" id="ESW10318">
        <property type="protein sequence ID" value="ESW10318"/>
        <property type="gene ID" value="PHAVU_009G199200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NFRLEPM"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010268">
        <property type="term" value="P:brassinosteroid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016131">
        <property type="term" value="P:brassinosteroid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd20639">
        <property type="entry name" value="CYP734"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000029">
        <property type="entry name" value="Cytochrome P450 734A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050665">
        <property type="entry name" value="Cytochrome_P450_Monooxygen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24282:SF224">
        <property type="entry name" value="CYTOCHROME P450 734A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24282">
        <property type="entry name" value="CYTOCHROME P450 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 11 12" id="KW-0349">Heme</keyword>
    <keyword evidence="8 11 12" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 12" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="7 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="11">
        <location>
            <position position="462"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW10318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="527" mass="59459" checksum="0C4F219DCE64A1FF" modified="2014-02-19" version="1">MGEVFKILFVFLITLLLLLKVALSFWWRPRKIQGHFFNQGIRGPPYRFFVGNVQELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKLYGATFLVWFGPTARVTISDPDLIREIFTSKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIIAPTFHMENLKLLIPIMATSVVEMMEKWRSMAETGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAIFQLQAQQMELAAGAFQKVLIPGFRFFPTRKNLNSWKLDKEMKRSLVKLIDRRKENACGKEDTKGAKDLLGLMIRASHSSSSSSNVNVTVDDIVEECKSFFFAGKHTTSNLLTWSTILLAMHPQWQVQAREEVEMVCGARDIPGKDDLVKLKTLTMIVNESLRLYPPTIATIRRAKADVELGAFKIPCGTELLIPILAVHHDQATWGSDATEFNPGRFSNGVSRAALRPFAFIPFGLGARTCVGQNLALLQTKLTLAIMLTRFTFKLAPTYRHAPTVLMLLYPQYGAPIIFQPIATATTTTTTSDCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0T8</accession>
    <name>V7B0T8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF7894 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G215100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0T8"/>
    <dbReference type="STRING" id="3885.V7B0T8"/>
    <dbReference type="Gramene" id="ESW10503">
        <property type="protein sequence ID" value="ESW10503"/>
        <property type="gene ID" value="PHAVU_009G215100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWQP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYEPLAC"/>
    <dbReference type="OrthoDB" id="1927925at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057216">
        <property type="entry name" value="DUF7894"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37221">
        <property type="entry name" value="OS02G0582400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37221:SF1">
        <property type="entry name" value="OS02G0582400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25428">
        <property type="entry name" value="DUF7894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7894" evidence="1">
        <location>
            <begin position="1"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="214" mass="23737" checksum="866D99AD6CAE479D" modified="2014-02-19" version="1">MKVAPVVVFLFRDSEGFAAAILQALHPNTSSSFTRREDTFDHSLEPYGIKHLKASGSVSHFVDEHGAYMVSIVAMEHYKPPVLACALNEVLNKITADKSSLPTLLVPFLVESSKVKGKIKHLGSDESKPLIFGIPIGQNTDIMQALLNKTQELPSSSWIQHEIFASFLHFVRIIHAIGEILASTTGLQFSEDRVVWNPKKKSVQSKEPWQALYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2J5</accession>
    <name>V7B2J5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G002500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2J5"/>
    <dbReference type="SMR" id="V7B2J5"/>
    <dbReference type="STRING" id="3885.V7B2J5"/>
    <dbReference type="Gramene" id="ESW11108">
        <property type="protein sequence ID" value="ESW11108"/>
        <property type="gene ID" value="PHAVU_008G002500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1164">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YTHQVYE"/>
    <dbReference type="OrthoDB" id="1932208at2759"/>
    <dbReference type="PhylomeDB" id="V7B2J5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd14016">
        <property type="entry name" value="STKc_CK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000222">
        <property type="entry name" value="casein kinase 1-like protein HD16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050235">
        <property type="entry name" value="CK1_Ser-Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055900">
        <property type="entry name" value="DUF7477"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11909">
        <property type="entry name" value="CASEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24289">
        <property type="entry name" value="DUF7477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="113"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW11108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="675" mass="75552" checksum="9744288E84AC041B" modified="2014-02-19" version="1">MPELRSGPRRRRAPVGRRSSEPPSSGGRYVKTRAAVAREAAAAERPRTRLAAKQSEEEKPVIVISDHTKKEVEGGAMADESGGLSANKGAAPEDDANPAPFPDRVQVGGSPVYKVDRKLGKGGFGQVFVGRRVTGGNDRTAGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMSAEMVSCIAVESLSILEKMHSRGYVHGDVKPENFLLGQPSTPQEKKLYLVDLGLATKWRDTSSGLHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPAPFRQFLEVVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARQPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFSSQVYKLSPFFLHKEWIMEQWEKNFYITSIAGANNGSSLVVMSKGTHYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNSGYTDQVIELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5C3</accession>
    <name>V7B5C3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_008G082400g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5C3"/>
    <dbReference type="SMR" id="V7B5C3"/>
    <dbReference type="STRING" id="3885.V7B5C3"/>
    <dbReference type="Gramene" id="ESW12073">
        <property type="protein sequence ID" value="ESW12073"/>
        <property type="gene ID" value="PHAVU_008G082400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECFRKFA"/>
    <dbReference type="OrthoDB" id="1903759at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000003">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000007">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000058">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000645">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590">
        <property type="entry name" value="OS03G0124300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590:SF5">
        <property type="entry name" value="OS04G0586500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 17" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0278">Fertilization</keyword>
    <keyword evidence="13" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 17" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 20" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756280" description="non-specific serine/threonine protein kinase" evidence="20">
        <location>
            <begin position="27"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="454"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="540"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="18">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="18">
        <location>
            <begin position="825"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="18">
        <location>
            <begin position="61"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="18">
        <location>
            <begin position="861"/>
            <end position="874"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="18">
        <location>
            <begin position="887"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="569"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW12073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="898" mass="98086" checksum="5B7798B42C28CD16" modified="2014-02-19" version="1">MWSVNRYCVCVPLFVCLVLAIELVVAKDFQPTDNILLDCGGPSSSTDTDGRVWTTDVGSKFDSSSAKSTTVSPAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYPASYSNLNASDARFAVTANSYTLLRNFSVAQTTLALNYAYILKEFAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPDIYTSTDGTTMIVGTNTAYTIDNSTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADPDVKFEYPPGTPSYIAPLDVYTTARSMGPNPKINTNYNLSWIFNIDSGFSYLVRLHFAEVSSNITKNNQRVFDIFLNNQTATQEADVIAWAKEFGLSHSNGVPVHKDYVVFIPEDVEPRQDLWLALHPDPTDKPMYYDAILNGVEIFKINDTAGNLAGTNPIPPPVQDIIDPSTARAHNHGKSKNHTGIIAGGVAGGVVVVLLIGLFAFALSRRQRKDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILVDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPALAKEQVSLAEWAAHCYLKGTLDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNGFGGIGNEVEPTYTDSKGKKDSDAMGGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5F1</accession>
    <name>V7B5F1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">glutathione-specific gamma-glutamylcyclotransferase</fullName>
            <ecNumber evidence="4">4.3.2.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G163900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the gamma-glutamylcyclotransferase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.7" evidence="4"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5F1"/>
    <dbReference type="SMR" id="V7B5F1"/>
    <dbReference type="STRING" id="3885.V7B5F1"/>
    <dbReference type="Gramene" id="ESW13054">
        <property type="protein sequence ID" value="ESW13054"/>
        <property type="gene ID" value="PHAVU_008G163900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3182">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHREKDG"/>
    <dbReference type="OrthoDB" id="1933483at2759"/>
    <dbReference type="PhylomeDB" id="V7B5F1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061928">
        <property type="term" value="F:glutathione specific gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.490.10:FF:000002">
        <property type="entry name" value="Gamma-glutamylcyclotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.490.10">
        <property type="entry name" value="Gamma-glutamyl cyclotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006840">
        <property type="entry name" value="ChaC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036568">
        <property type="entry name" value="GGCT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12192">
        <property type="entry name" value="CATION TRANSPORT PROTEIN CHAC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12192:SF2">
        <property type="entry name" value="GLUTATHIONE-SPECIFIC GAMMA-GLUTAMYLCYCLOTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04752">
        <property type="entry name" value="ChaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110857">
        <property type="entry name" value="Gamma-glutamyl cyclotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="185" mass="20895" checksum="ED13B12EAD7B0E38" modified="2014-02-19" version="1">MVMWVFGYGSLISKAGFHYDERVVGFIKGYRRVFYQGSTDHRGTPVFPGRTVTLEPAEGEICWGAAYKISKEEDAESALTYLEVREKQYDKKEYVDFYTDLTATSPAVSGVMVYIATPDKKANVNYLGPASDEEIARQIIQAEGPAGPNRDYLFNLEKALLQIGCKDKHVIDLANEVRRILEEEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5W0</accession>
    <name>V7B5W0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Blue light photoreceptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G173700g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="12">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA photolyase class-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5W0"/>
    <dbReference type="SMR" id="V7B5W0"/>
    <dbReference type="STRING" id="3885.V7B5W0"/>
    <dbReference type="Gramene" id="ESW13174">
        <property type="protein sequence ID" value="ESW13174"/>
        <property type="gene ID" value="PHAVU_008G173700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0133">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KYFPWVV"/>
    <dbReference type="OrthoDB" id="435881at2759"/>
    <dbReference type="PhylomeDB" id="V7B5W0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016604">
        <property type="term" value="C:nuclear body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009882">
        <property type="term" value="F:blue light photoreceptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003904">
        <property type="term" value="F:deoxyribodipyrimidine photo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010617">
        <property type="term" value="P:circadian regulation of calcium ion oscillation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032922">
        <property type="term" value="P:circadian regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043153">
        <property type="term" value="P:entrainment of circadian clock by photoperiod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072387">
        <property type="term" value="P:flavin adenine dinucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009638">
        <property type="term" value="P:phototropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901371">
        <property type="term" value="P:regulation of leaf morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010075">
        <property type="term" value="P:regulation of meristem growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048580">
        <property type="term" value="P:regulation of post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000377">
        <property type="term" value="P:regulation of reactive oxygen species metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009646">
        <property type="term" value="P:response to absence of light"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010244">
        <property type="term" value="P:response to low fluence blue light stimulus by blue low-fluence system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902347">
        <property type="term" value="P:response to strigolactone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010118">
        <property type="term" value="P:stomatal movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000193">
        <property type="entry name" value="Cryptochrome 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.579.10:FF:000003">
        <property type="entry name" value="Deoxyribodipyrimidine photo-lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.579.10">
        <property type="entry name" value="DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036155">
        <property type="entry name" value="Crypto/Photolyase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005101">
        <property type="entry name" value="Cryptochr/Photolyase_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002081">
        <property type="entry name" value="Cryptochrome/DNA_photolyase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020978">
        <property type="entry name" value="Cryptochrome_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014134">
        <property type="entry name" value="Cryptochrome_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018394">
        <property type="entry name" value="DNA_photolyase_1_CS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006050">
        <property type="entry name" value="DNA_photolyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02766">
        <property type="entry name" value="crypt_chrom_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455">
        <property type="entry name" value="CRYPTOCHROME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455:SF50">
        <property type="entry name" value="CRYPTOCHROME-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12546">
        <property type="entry name" value="Cryptochrome_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00875">
        <property type="entry name" value="DNA_photolyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03441">
        <property type="entry name" value="FAD_binding_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00147">
        <property type="entry name" value="DNAPHOTLYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="Cryptochrome/photolyase FAD-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52425">
        <property type="entry name" value="Cryptochrome/photolyase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00394">
        <property type="entry name" value="DNA_PHOTOLYASES_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00691">
        <property type="entry name" value="DNA_PHOTOLYASES_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51645">
        <property type="entry name" value="PHR_CRY_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0157">Chromophore</keyword>
    <keyword evidence="7 12" id="KW-0274">FAD</keyword>
    <keyword evidence="5 12" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0600">Photoreceptor protein</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0716">Sensory transduction</keyword>
    <feature type="domain" description="Photolyase/cryptochrome alpha/beta" evidence="15">
        <location>
            <begin position="5"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="516"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="612"/>
            <end position="682"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="576"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="656"/>
            <end position="682"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="240"/>
            <end position="244"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="283"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="383"/>
            <end position="385"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="site" description="Electron transfer via tryptophanyl radical" evidence="13">
        <location>
            <position position="317"/>
        </location>
    </feature>
    <feature type="site" description="Electron transfer via tryptophanyl radical" evidence="13">
        <location>
            <position position="370"/>
        </location>
    </feature>
    <feature type="site" description="Electron transfer via tryptophanyl radical" evidence="13">
        <location>
            <position position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00082946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR602081-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR602081-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW13174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="682" mass="77145" checksum="2E3C163CBAD0F696" modified="2014-02-19" version="1">MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIWAPEEEGQYYPGRVSRWWLKQSLAHLDSSLRSLGTPLITKRSTNSVSSLLEVIKSTGATQLFFNHLYDPLSLVRDHRTKEVLTAQGITVRSFNSDLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGDASRCPCDTLVFEDELEKASNALLSRAWSPGWSNADKALAAFVNGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKCDPNGEYVRRWLPELARLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGIDAAKVRLQEALIQTWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDTLMEERPAEPVRNNPPHGTRRYEDQMVPSMTSSHVRVEEEETSSDLRNSAADNRAEVPTNVTTQQNARETVNQGELLNVNRNTRVQNNATMWLRNAAEDSTAESSISTRRERDGGVVPVWSPPASNFSEQYADDENGIGASSSYLQRQHPQSHQLMNWTRLPQTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6J6</accession>
    <name>V7B6J6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ketoreductase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G116100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6J6"/>
    <dbReference type="SMR" id="V7B6J6"/>
    <dbReference type="STRING" id="3885.V7B6J6"/>
    <dbReference type="Gramene" id="ESW12473">
        <property type="protein sequence ID" value="ESW12473"/>
        <property type="gene ID" value="PHAVU_008G116100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAPKVRI"/>
    <dbReference type="OrthoDB" id="417891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057326">
        <property type="entry name" value="KR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045000">
        <property type="entry name" value="TR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898:SF101">
        <property type="entry name" value="ENOYL-(ACYL CARRIER) REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898">
        <property type="entry name" value="TROPINONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00822">
        <property type="entry name" value="PKS_KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ketoreductase" evidence="4">
        <location>
            <begin position="19"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW12473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="28832" checksum="C1D6092D922643A0" modified="2014-02-19" version="1">MGEPKFSSIKDKRWSLHGMTALVTGGTRGIGHAIVEELAEFGASIHVCSRKEEDINRCLEEWKKKGFNVTGSVCDVLHRHQRQTLMETVSSIFQGKLNILVNNAGTEITKKIIDHTAEDISTIMATNFESAFHLTQLAHPLLKESGSGNIVFISSIAGVQAIPLLSAYSASKGAMNQFTKNVALEWAKDYIRANVVAPGPIWTPLLESAVEKCGPEEFDANVISKIHFGRIGEPKEVSSLVAFLCLPAASYINGQILYVDGGFTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6S7</accession>
    <name>V7B6S7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">GATA transcription factor 25</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_008G182900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type IV zinc-finger family. Class C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6S7"/>
    <dbReference type="SMR" id="V7B6S7"/>
    <dbReference type="Gramene" id="ESW13275">
        <property type="protein sequence ID" value="ESW13275"/>
        <property type="gene ID" value="PHAVU_008G182900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HETACTH"/>
    <dbReference type="OrthoDB" id="2162994at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00202">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.50.10">
        <property type="entry name" value="Erythroid Transcription Factor GATA-1, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010402">
        <property type="entry name" value="CCT_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045280">
        <property type="entry name" value="TIFY-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010399">
        <property type="entry name" value="Tify_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000679">
        <property type="entry name" value="Znf_GATA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013088">
        <property type="entry name" value="Znf_NHR/GATA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46125:SF20">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46125">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06203">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00320">
        <property type="entry name" value="GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06200">
        <property type="entry name" value="tify"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00979">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00401">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51017">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00344">
        <property type="entry name" value="GATA_ZN_FINGER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50114">
        <property type="entry name" value="GATA_ZN_FINGER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51320">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0010">Activator</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Tify" evidence="17">
        <location>
            <begin position="73"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="CCT" evidence="16">
        <location>
            <begin position="142"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="GATA-type" evidence="15">
        <location>
            <begin position="209"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="175"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="11"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="179"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW13275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="20">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="311" mass="33896" checksum="FE9223545DA7CA4D" modified="2014-02-19" version="1">MDPPAMYGHSQPLNMPPQISTAESDDGSGPDPALDAHHHIHYETHALEDGATGAMVVVEDVTSDAVYVSGGGGPEESSQLTLSFRGQVYVFDAVTPDKVQAVLLLLGGCELSSSGSPCVDVVPQQNQRGSMEYPARCSLPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGANSYGTDQDSGQDDCQLETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNHEHSLAPVEQVDEGNDSDCRTAANPAHNNLAHAAYSEHDHPALVADRKVFQSQKMLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B730</accession>
    <name>V7B730_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Thaumatin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G192300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thaumatin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7B730"/>
    <dbReference type="Gramene" id="ESW13395">
        <property type="protein sequence ID" value="ESW13395"/>
        <property type="gene ID" value="PHAVU_008G192300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQQN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPEYLAV"/>
    <dbReference type="OrthoDB" id="430315at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="entry name" value="TLP-PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.110.10:FF:000002">
        <property type="entry name" value="Thaumatin-like protein 1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.110.10">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037176">
        <property type="entry name" value="Osmotin/thaumatin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001938">
        <property type="entry name" value="Thaumatin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017949">
        <property type="entry name" value="Thaumatin_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31048">
        <property type="entry name" value="OS03G0233200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00314">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002703">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00347">
        <property type="entry name" value="THAUMATIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00205">
        <property type="entry name" value="THN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49870">
        <property type="entry name" value="Osmotin, thaumatin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00316">
        <property type="entry name" value="THAUMATIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51367">
        <property type="entry name" value="THAUMATIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756340" description="Thaumatin-like protein" evidence="6">
        <location>
            <begin position="23"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="31"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="79"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="95"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="150"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="155"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="163"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="182"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="5">
        <location>
            <begin position="192"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR002703-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="245" mass="25867" checksum="5FA4E369D26F9DCF" modified="2014-02-19" version="1">MHTFMHPFIFICILISIHLTAGTQLILVNNCKESVWPGILGSPAHPTPKDGGFHLCSGEEVVLDVPEGWSGRIWGRQGCCFDPITGKGSCETGDCGGILKCGGMGGVPPATLVEMTLGTSQSALHFYDVSLVDGFNLPVSMKPVSGGVGCGVAACEANLNVCCPPALAMKMQGRVVGCKSACLAAKSDRYCCTGEFATPKSCKPSAFSRLFKTVCPQAYSYAYDDSTGLKICKAQRYVITFCPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8Z3</accession>
    <name>V7B8Z3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G267700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8Z3"/>
    <dbReference type="SMR" id="V7B8Z3"/>
    <dbReference type="STRING" id="3885.V7B8Z3"/>
    <dbReference type="Gramene" id="ESW14279">
        <property type="protein sequence ID" value="ESW14279"/>
        <property type="gene ID" value="PHAVU_008G267700g"/>
    </dbReference>
    <dbReference type="OMA" id="HERSGVH"/>
    <dbReference type="OrthoDB" id="6160824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10140:FF:000007">
        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32009:SF113">
        <property type="entry name" value="TIR-LIKE DOMAIN PROTEIN TSDC PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32009">
        <property type="entry name" value="TMV RESISTANCE PROTEIN N-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TIR" evidence="2">
        <location>
            <begin position="2"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="TIR" evidence="2">
        <location>
            <begin position="172"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW14279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="334" mass="38664" checksum="269B25A618A3C2C2" modified="2014-02-19" version="1">MARYDVFLCFRGEDTRLTFTGNLYAALQQARLRTFRDEGVLKGGDLVYSIIEALEASRVAIVVLSENFAFSRWCLDELVKILDCMKTKNQIVIPIFYNVDPSDVRNLRGSFADAMVDHEHRFGKNFDKIRNWRSALTEVANLSGWCLGRGSRFGYEYEYIERIVRDLTLRLPRYTIFLSFSGKDTRSFSGFLYNALSRSGYHTILNDGDQSSQSTVGVIEKSKLSIIVFSENYARSPSCLDELLRILECKEMKKQLVCPIFYKLLPSDLRHQRNSYGEAMSEHETMMGKDSEKVKKWRSALFEVANLKGWYMKTGYEYEFIEKIVELANKISRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9C1</accession>
    <name>V7B9C1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">red chlorophyll catabolite reductase</fullName>
            <ecNumber evidence="9">1.3.7.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G280200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>primary fluorescent chlorophyll catabolite + 2 oxidized [2Fe-2S]-[ferredoxin] = red chlorophyll catabolite + 2 reduced [2Fe-2S]-[ferredoxin] + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:24752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:58716"/>
            <dbReference type="ChEBI" id="CHEBI:77670"/>
            <dbReference type="EC" id="1.3.7.12"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="8">
            <dbReference type="Rhea" id="RHEA:24754"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; chlorophyll degradation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="1.3.7.12" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9C1"/>
    <dbReference type="SMR" id="V7B9C1"/>
    <dbReference type="STRING" id="3885.V7B9C1"/>
    <dbReference type="Gramene" id="ESW14429">
        <property type="protein sequence ID" value="ESW14429"/>
        <property type="gene ID" value="PHAVU_008G280200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSTY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHETANR"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051743">
        <property type="term" value="F:red chlorophyll catabolite reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015996">
        <property type="term" value="P:chlorophyll catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1500.20:FF:000001">
        <property type="entry name" value="Red chlorophyll catabolite reductase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009439">
        <property type="entry name" value="RCC_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34685">
        <property type="entry name" value="RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34685:SF2">
        <property type="entry name" value="RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06405">
        <property type="entry name" value="RCC_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0881">Chlorophyll catabolism</keyword>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="332" mass="37237" checksum="4C581CB97E4520BF" modified="2014-02-19" version="1">MEVMICDHFRCSPLSILSSFSPSTRYNLSLPSSSPSFRLKPSSSSSSLCSSRMEGTHQTHDHGRSKFIDFPFVSSAQKNVMVDLVSRLENRLHSQLLPCTLPPDVQYYQSQTATAQASLHIRSGSDDSQVDFVLGSWVQSELPTGGSLDITSLSAYLKSSTDAPNFVFEMIRSSPTMLVLILDLPPRKDLVLWPEDLKTFYEDTQLDTHRQALERVPEVQPYFSSSLYIRTVSSPTAIMIRIVTENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAKRDVGEAERAYLNKRDGLIRNKTIEIDLGSSFPRLFGPEVANRVLEAIKGYFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9G1</accession>
    <name>V7B9G1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G168800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9G1"/>
    <dbReference type="SMR" id="V7B9G1"/>
    <dbReference type="Gramene" id="ESW13111">
        <property type="protein sequence ID" value="ESW13111"/>
        <property type="gene ID" value="PHAVU_008G168800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7DF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLISSGW"/>
    <dbReference type="OrthoDB" id="1931171at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031851">
        <property type="entry name" value="DUF4750"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37192">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37192:SF2">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15938">
        <property type="entry name" value="DUF4750"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="83" mass="9493" checksum="A9A1A53ED5FDBBC8" modified="2014-02-19" version="1">MASSLSFWDYTVLFFLRPLFAIVFVLFLISSGWFVAWKLVLVHVPLVQEVFGLRKKPVRVKPPIGRFSKIYSTLHAQNPPSTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9S3</accession>
    <name>V7B9S3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein FAR1-RELATED SEQUENCE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G293200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Putative transcription activator involved in regulating light control of development.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the FHY3/FAR1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9S3"/>
    <dbReference type="SMR" id="V7B9S3"/>
    <dbReference type="STRING" id="3885.V7B9S3"/>
    <dbReference type="Gramene" id="ESW14579">
        <property type="protein sequence ID" value="ESW14579"/>
        <property type="gene ID" value="PHAVU_008G293200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR48">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRWTKEA"/>
    <dbReference type="OrthoDB" id="1927586at2759"/>
    <dbReference type="PhylomeDB" id="V7B9S3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031052">
        <property type="entry name" value="FHY3/FAR1"/>
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    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006564">
        <property type="entry name" value="Znf_PMZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669:SF240">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="8">
        <location>
            <begin position="330"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="486"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW14579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="548" mass="62555" checksum="9983EA667974CAA2" modified="2014-02-19" version="1">MSITRQRTLGGGGHVLDYLKRMQAENPSFFYAVQDDNDLSCGNIFWADAASRTNYSYFGDAVILDTTYKTNRYRVPFASFTGLNHHGQPVLFGCALILNESELSFIWLFRTWLHAMSGRHPASITTDFDPSIHVIVAQVLPSTRHRFSKWSIFRETRGKLAHLCQSHPAFETEFKKCIHESETTDEFDSYWHSLLERFCVMDNEWLQSMYNARQHWVPVYLRDSFFGEISSNEGNECLNFFFDGYVNSSTTLLGLVRQYEKAVSNWHERELKADYETTNSSPVLKTPSPMEKQAANLYTRKMFMKFQEELVETLANPATKIDDSGTITTYRVAKFGENQKSHVVTFNSFETKASCSCLMFEYSGIICRHILTVFRAKNVLTLPPQYLLKRWTRNAKTGTLLEEHASELPSSSRESVTVRYNNLRQEAVKYVEEGAKSIQIYHVAMRALQEAANKVCTVKNQITGTAEGATVTNGSRGDLLAADEDVASYQSVQAEKQKKIQELTAELEVANQQCEVYRANLLAVLKDMEEQKLKLSVKVQNARLSLKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB14</accession>
    <name>V7BB14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G016000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB14"/>
    <dbReference type="SMR" id="V7BB14"/>
    <dbReference type="Gramene" id="ESW14770">
        <property type="protein sequence ID" value="ESW14770"/>
        <property type="gene ID" value="PHAVU_007G016000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFNWNTI"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001360">
        <property type="entry name" value="Pentatricopeptide (PPR) repeat-containing protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001269">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At5g56310"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF483">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="78"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="179"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="210"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="211"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="313"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="348"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW14770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="548" mass="61332" checksum="397979CF4779B403" modified="2014-02-19" version="1">MLGVSWSCKITNLNQNLLSLLEKCKSMLELKQLHAVVISFGLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSIPTIFNWNTIIRGYSNSKTPVNSLSVFLKMLRLGVAPDYFTYPFLVKASARLLNQELGVSVHAHIIQTGHESDRFIQNSLIHMYASCGNIMWAQKVFDSIQGKNLVSWNSMLDGYAKCGEMVTAQKVFESMLEKDVRSWSSLINAYVKAGDYSEAMSVFEKMRAVGPKANEVTMVSVSCACAHLGALEKGKMIHKYIVDSGLPLTLVLQTSLVDMYAKCGAIEEALLVFRGVSKSQTDVLIWNAIIGGLATHGLVEESLKLFKEMQTVGIQPDEVTYLCLLAACAHGGLVKEAWYFFESLNKCGMTPTIEHYACMVDVLARADQLTTAYQFIRRMPIEPTAAMLGALLSGCINHRNLALAETVGKKLIELEPNHDGRYIGLSNVYAFDKRWDDARSMREAMDRRGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETNCMLNFVFRQMKFSWYKDNEEKSLEDTSTGDELLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBH1</accession>
    <name>V7BBH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Cucumisin-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G229000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBH1"/>
    <dbReference type="SMR" id="V7BBH1"/>
    <dbReference type="Gramene" id="ESW13821">
        <property type="protein sequence ID" value="ESW13821"/>
        <property type="gene ID" value="PHAVU_008G229000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRA7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCSKHAK"/>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 9" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Inhibitor I9" evidence="11">
        <location>
            <begin position="12"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="10">
        <location>
            <begin position="93"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="12">
        <location>
            <begin position="586"/>
            <end position="658"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW13821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="667" mass="71201" checksum="FBD2C339C5055182" modified="2014-02-19" version="1">MGEYPKDMEITESFHTSMVQSVLGSKFASDTLLHHYKSFNGFVARLTKEESERMKGTDGVVSIIPDRVHNVDTSRSWNFLNFPEDVPRANEESNTIVGVIDSGIWISNANSFSDRGFGPPPPKWKGTCHNFTCNNKVIGARYFRIRGQFRPQDIISPVDTNGHGSHCASIAAGNLVPNVNLFGLGLGTARGGVPSARIAVYKVCWTAGCQSVDILAAYDAAILDGVDILSVSLGPISIRQQNYFEDIYAIGAFHAMRRGILTSKSAGNSGPGRATIPNLAPWLISVAAATIDRKFFTNLKLGNGQIIRNGYPIVYGGDVPAPGFSSSTSRLCTNNSLNGALVRGKIVLCDGYASSVRVGFASGAAGIIFRSTLPLVVADAFALPEVHISSSDGQSVYNYLKSTSNPTAIISKSYEGIDSAAPFIARFSSRGPNTITPNILKPDIAAPGVNILAAWSPISPISSVNGDSRISYFNIISGTSMACPHVTATAAYVKSFHPSWSPTVLTSALMTTATPMNPALNSDAEFAYGAGQINPLKAVNPGLVYDAGPNDYIEFLCGEDYSTTMLRQITGDSSTCTSANRGSVFNLNLPSFALATARSSYNHVTFGRTVTNVGSARSTYRARVSGYPSSLNIQVVPNVLTFTSVGQRLPFILRIQGTINTNLVSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCZ3</accession>
    <name>V7BCZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Alpha-taxilin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G092600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the taxilin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCZ3"/>
    <dbReference type="SMR" id="V7BCZ3"/>
    <dbReference type="STRING" id="3885.V7BCZ3"/>
    <dbReference type="Gramene" id="ESW15674">
        <property type="protein sequence ID" value="ESW15674"/>
        <property type="gene ID" value="PHAVU_007G092600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1850">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QQGECQS"/>
    <dbReference type="OrthoDB" id="425555at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019905">
        <property type="term" value="F:syntaxin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026183">
        <property type="entry name" value="Taxilin_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16127:SF13">
        <property type="entry name" value="GH01188P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16127">
        <property type="entry name" value="TAXILIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09728">
        <property type="entry name" value="Taxilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="417"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="185"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="249"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="21"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="35"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="92"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="145"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="425"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="436" mass="49496" checksum="DD8AFA7691FA9D9C" modified="2014-02-19" version="1">MQNPDANQLPEVDSLPDGFVESTTEPLAPATPTPEQEKPLNSYKDDGSSDLIHSNELSNDMGAKEFQTNDDCSVEISSSSCAQQNEGVQSTPPVAVSVSKSPPSRCCEVKETHQGECQSSDGSTGVPLETKALPVKNVCSSETVDSSKNKKSETGEKRKSAKRTLKSEKELLEFTLNYQQVLAERDAALAIRDKLESLCRELQRQNKMLMEECKRVSTEGQNLRLDLSAKFQDAIKDVSNKLEERKDECLSQLKENDMLRNKLKQLAEQYDLSEQQYAQKLKQKSLELQLSDLKMKQHEEKLIQEQSQIKLYAEQVSQLLATEKSLRLQLTTDGEKFQQFQEALSKSNEIFETFKQEIEKMAKSIKELKKENQFLKSKSEKSDVILIELVDERERLKKQLEKTKNQKEKLESLCRSLQAERKQSSSENKSNISVQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEL4</accession>
    <name>V7BEL4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alpha/beta hydrolase fold-3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G064600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDXG' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEL4"/>
    <dbReference type="SMR" id="V7BEL4"/>
    <dbReference type="Gramene" id="ESW15338">
        <property type="protein sequence ID" value="ESW15338"/>
        <property type="gene ID" value="PHAVU_007G064600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1515">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHEYCDP"/>
    <dbReference type="OrthoDB" id="408631at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050466">
        <property type="entry name" value="Carboxylest/Gibb_receptor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024">
        <property type="entry name" value="ARYLACETAMIDE DEACETYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024:SF473">
        <property type="entry name" value="RECEPTOR GID1, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754460" description="Alpha/beta hydrolase fold-3 domain-containing protein" evidence="2">
        <location>
            <begin position="26"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha/beta hydrolase fold-3" evidence="3">
        <location>
            <begin position="99"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="338" mass="37664" checksum="8A5EEA4E152AE2F2" modified="2014-02-19" version="1">MAVHKVTTVFSICLILIHASKLAHSAMDPYKALNIILNPNGTLTRLSIPPQSPPSPDPTLPTPVLSKDLPINKSNHTWARIYLPHQAQDHSPNHKLPLIVFYHGGGFLFYSAASTYFHDFCVRMAHATQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKASKDRWLRHADYSRCYLMGESAGGNIAYTAGLRAAAEVENLKPLKIEGLMLIQPFFGGTKRSPSEIRLAEDKTIPLPITDLMWNLSLPFGVDRDYEYSNPTVHGGDKILDGIKVLGWRVAVFGCEGDPLVDRERELVKLLQQKGVHVAGKFYEGGRHGIFVGDPSMSVHVFNHLKTLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BF76</accession>
    <name>V7BF76_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nuclear pore complex protein NUP1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G136500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BF76"/>
    <dbReference type="STRING" id="3885.V7BF76"/>
    <dbReference type="Gramene" id="ESW16195">
        <property type="protein sequence ID" value="ESW16195"/>
        <property type="gene ID" value="PHAVU_007G136500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0845">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESCPNDH"/>
    <dbReference type="OrthoDB" id="653468at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005635">
        <property type="term" value="C:nuclear envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071763">
        <property type="term" value="P:nuclear membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016973">
        <property type="term" value="P:poly(A)+ mRNA export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33416">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33416:SF20">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="313"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="734"/>
            <end position="767"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="890"/>
            <end position="910"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1174"/>
            <end position="1229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="754"/>
            <end position="767"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="891"/>
            <end position="910"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1181"/>
            <end position="1196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1197"/>
            <end position="1207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1217"/>
            <end position="1229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1229" mass="128728" checksum="EA5DFE2958D8612D" modified="2014-02-19" version="1">MATQEKDKGYEGTVGAGGKFRKRPFRGRTQTTPYDRPPTSLRNHNRNTTNNNGWFSKLLDPAHRLITYSAHTLFSSLFRKRLPPPPPPETEHKVKKSNQQEAAFVANNSSGMQQVPVGESDTQINCSDEDGLTELEKLLKQKTFSRSEIDHLTALMRSRTVDAPVREEEKGTDVVPSESMLLSGQKEYPKTPALENGIENTVIVTPHDISSFPIEDVASPAELAKSYMGSRHYKVSSSVLGVQTSALWEDPTLVNRENFPLNTPIMTIVPRTTKYAAVHENGFITSRSRGRSAIYNMARTPYARIYPASTLKGGEHAVEGEPSSSSQSALNHDVLSGSNPGAVKRRSSVLDNDIGSVGPVRRIRQKSNLLYSKGPSSLISGSSLYADRNQMVVDTSKQGSSMQKPILLNEVKHSHVKLSKENVDDTIPSLSSPPLPSKSSEMASKILQQLDKLVYPKEKSSESRVTIVNDNSPTKLSPSMLRGQALRSMEIVDSSKLLDNMHGNNLDGPFGNLSGSAQNQKLNSQRDKVENGPLKLVAPTDGLLPLVTTADATNPRNQALCSAKSGDSFMIKSVSDLPRKKRAFHMSAHEDFLDLDDDAYPNGSVSSFSPLEKEMISSTAVMGETNSGTEANVQENPSAISLIMPPKTSIIDVVSSREFTAPIAPPKEITKSGPTFGLAKVVSSKDLVADAPLVEFGSNKNVKKVSPIPFTASSSVGAEPSFLKFGASDSNLGSSIRTTTVDGATDSIPKARQSDNGNAETTNATRTSVGASELANLSPASTSFLTSSKSIFNFGNNSNQNNGSLASPSLSSFPPPVAGTFTSQNILSAAKISGISAIADSNGSSMATMTPATIASSNSSFSSTPVVASSYPTTSIFKFGSSPVPPAGLPVSSSGLEPLETKSSQDAGVGSLSSPAFGNTSAGYGIFGFSSSATKTVNSQSSSVGACSGSVLGAQASTPSGLEACNQTQSVPFGSSASSLSYGLTGNTTFSLSSFSSPSSSPAFSSGSSLFPSSPATDVFNSGTTFGLINSASCSAVNSFSSNTSTSSPIFGSSWQPSKSPFGSIFSSSSLSSSGSSLGTSTACASSPAMFLSTSSASTPQFSFTSAAGSTSTQHAFGSPTPTFAFGSAPVNNQMSMEVGMTEDTVKGTPPATSVFAQQPAPLQSNFVFGASTPPGASPFQFGSQQNIAPQNPSFQTSASLGGSFSLGTGGGDKSGRKIVKVKSKQRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG73</accession>
    <name>V7BG73_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G188000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG73"/>
    <dbReference type="Gramene" id="ESW16827">
        <property type="protein sequence ID" value="ESW16827"/>
        <property type="gene ID" value="PHAVU_007G188000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="11475" checksum="29AF8B02738B4CE3" modified="2014-02-19" version="1">MIAFILSPHINIIKTRGSKSWLLIQARHGGCSSLHIIFTHASLQSCNTFLPKIPSFTISVCFTLFPPTFRTRLLLSFSLKNQEKPPKKLLQKIDKIKSKPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGC7</accession>
    <name>V7BGC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Formin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G196700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the formin-like family. Class-I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGC7"/>
    <dbReference type="SMR" id="V7BGC7"/>
    <dbReference type="STRING" id="3885.V7BGC7"/>
    <dbReference type="Gramene" id="ESW16939">
        <property type="protein sequence ID" value="ESW16939"/>
        <property type="gene ID" value="PHAVU_007G196700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1922">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEDCHSS"/>
    <dbReference type="OrthoDB" id="1668162at2759"/>
    <dbReference type="PhylomeDB" id="V7BGC7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045010">
        <property type="term" value="P:actin nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027643">
        <property type="entry name" value="Formin-like_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213:SF177">
        <property type="entry name" value="FORMIN-LIKE PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213">
        <property type="entry name" value="FORMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02181">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00498">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="157"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="FH2" evidence="5">
        <location>
            <begin position="488"/>
            <end position="912"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="99"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="190"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="260"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="110"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="128"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="261"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="286"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="305"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="327"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="357"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="376"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="397"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="424"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="443"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW16939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="912" mass="100824" checksum="D5BAC28D426AE027" modified="2014-02-19" version="1">MGCASEHFSMIFIITLFVILSLQSTHVLTVTGSLFNAVGSFQVHGLPEMYFIEENDEKQIKKISGLDENEEKQALIVDKFRSLLGLKSFHTKVPSNGDLEFLSPSPSPSPLIEEAPASAPSPSPLAHLHSHSHHPRHRKNPPLHQTHHEDRGRAKRILIAVLVSAGVATLIGACGLFLVWRKFSSHAKKPKRTTPLYSKSKGSEGTCQSSSSKVSLNSGLDLFYLNALGEDIEQHGCTLKKTCKDGLEYDNVSGSSTKEVAFVHEDAESVKGEAESDDGNSSGDKIIPEDCHSSDDESFHSFVDSHSNNRLSNASASNLSDTNSLSRQNSSSLPNQFLSSPHNSIPSRQSHQPSSSTKHEEQGIETTHHCSKTFTSPPPPPPPPPPPPPPLQMPLFSLHSLTSSSRVSSHSPLSSTSNNLSSPINSDIFSGSNQSPEKELPSTPEPYPTHSPPNIPPPPCPPPLFKGNGYNAKTPPPPPSQLPLFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCDALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPYAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGMRVSDSIMGKISQRNKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMKMLQHLVEKELHKDERSMNFVQCMKSFLNYADANLKELRGDENKVLVRVKEITEYFHGDVSKEDANLLRIFVIVRDFLGMLDNVCKELRKSKARSPSPLAMLPLDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK01</accession>
    <name>V7BK01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10">Uricase</fullName>
            <ecNumber evidence="7 10">1.7.3.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Urate oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G234300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 10">Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 10">
            <text>urate + O2 + H2O = 5-hydroxyisourate + H2O2</text>
            <dbReference type="Rhea" id="RHEA:21368"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
            <dbReference type="EC" id="1.7.3.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Purine metabolism; urate degradation; (S)-allantoin from urate: step 1/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7 10">Belongs to the uricase family.</text>
    </comment>
    <dbReference type="EC" id="1.7.3.3" evidence="7 10"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK01"/>
    <dbReference type="SMR" id="V7BK01"/>
    <dbReference type="STRING" id="3885.V7BK01"/>
    <dbReference type="Gramene" id="ESW17375">
        <property type="protein sequence ID" value="ESW17375"/>
        <property type="gene ID" value="PHAVU_007G234300g"/>
    </dbReference>
    <dbReference type="OMA" id="ATMYKMS"/>
    <dbReference type="OrthoDB" id="9992118at2759"/>
    <dbReference type="UniPathway" id="UPA00394">
        <property type="reaction ID" value="UER00650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004846">
        <property type="term" value="F:urate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006145">
        <property type="term" value="P:purine nucleobase catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019628">
        <property type="term" value="P:urate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00445">
        <property type="entry name" value="Uricase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.270.10:FF:000001">
        <property type="entry name" value="Uricase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.270.10">
        <property type="entry name" value="Urate Oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002042">
        <property type="entry name" value="Uricase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019842">
        <property type="entry name" value="Uricase_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03383">
        <property type="entry name" value="urate_oxi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42874">
        <property type="entry name" value="URICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42874:SF1">
        <property type="entry name" value="URICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01014">
        <property type="entry name" value="Uricase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000241">
        <property type="entry name" value="Urate_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00093">
        <property type="entry name" value="URICASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55620">
        <property type="entry name" value="Tetrahydrobiopterin biosynthesis enzymes-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00366">
        <property type="entry name" value="URICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 7" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="4 7 10" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Charge relay system" evidence="8">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>O2</name>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>5-hydroxyisourate</name>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>O2</name>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>urate</name>
            <dbReference type="ChEBI" id="CHEBI:17775"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000241-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000241-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW17375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="308" mass="35142" checksum="948CFAAA8C5D3FB8" modified="2014-02-19" version="1">MAQEVVEGFKFEQRHGKERVRVARVWRTPQGRHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSVEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHQHGFTLGSEKHTTEAILQKSGSLQLTSGIEGLSVLKTTQSGFENFIRDKYTALPDTRERILATEVTALWRYSYESLYNLPQKPLYFTDKYLEVKKVLADTFFGPPNRGVYSPSVQNTLYLMAKATLNRFPDIAYVHLKMPNLHFLPVNISSKDGPIVKFEDDVYLPTDEPHGSIEASLSRVWSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLL7</accession>
    <name>V7BLL7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 17">Peroxidase</fullName>
            <ecNumber evidence="3 17">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_006G075600g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 17">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14 17">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="14 17">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14 17">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="14 17">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="17">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="17">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="3 17"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLL7"/>
    <dbReference type="SMR" id="V7BLL7"/>
    <dbReference type="STRING" id="3885.V7BLL7"/>
    <dbReference type="Gramene" id="ESW18847">
        <property type="protein sequence ID" value="ESW18847"/>
        <property type="gene ID" value="PHAVU_006G075600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERICPQV"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7BLL7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000009">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF257">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 14 17" id="KW-0106">Calcium</keyword>
    <keyword evidence="10 16" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 17" id="KW-0349">Heme</keyword>
    <keyword evidence="17" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="9 14 17" id="KW-0408">Iron</keyword>
    <keyword evidence="6 14 17" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 17" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="17" id="KW-0964">Secreted</keyword>
    <keyword evidence="17" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149019" description="Peroxidase" evidence="17">
        <location>
            <begin position="25"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="18">
        <location>
            <begin position="25"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="15">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="16">
        <location>
            <begin position="35"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="16">
        <location>
            <begin position="68"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="16">
        <location>
            <begin position="121"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="16">
        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW18847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="318" mass="33791" checksum="25939F91B1D29AB1" modified="2014-02-19" version="1">MALNSRCNVFCFSLFFCLLAIASAQLSSDFYATSCSSALSTIKSKVKSAVSKERRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAAANVDSLRGFDVIDDIKSQLETDCPGIVSCADILAVAARDSVVSLGGSSWTVGLGRRDSTTASKDAATTDIPSPQLDLSDLITAFSNKGFTTKEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSDFATSTQSNCPSTDGDSNLSPLDVTTNVLFDNSYFKNLVNKKGLLHSDQQLFSGGSTDSQVTAYSTSSSSFYADFSSAMVKMGNLSPLTGSSGQIRTNCRAVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMB3</accession>
    <name>V7BMB3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G020600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMB3"/>
    <dbReference type="Gramene" id="ESW18190">
        <property type="protein sequence ID" value="ESW18190"/>
        <property type="gene ID" value="PHAVU_006G020600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="8088" checksum="54BE2B132F4FD03B" modified="2014-02-19" version="1">MLYPELKVLATLLILKVVDKIRMTQQPCKHYTLNGEVLKRKGKMVVGKDAVAQLFLDNVFKLHGSNGCKDMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMW2</accession>
    <name>V7BMW2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G114800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMW2"/>
    <dbReference type="SMR" id="V7BMW2"/>
    <dbReference type="STRING" id="3885.V7BMW2"/>
    <dbReference type="Gramene" id="ESW19324">
        <property type="protein sequence ID" value="ESW19324"/>
        <property type="gene ID" value="PHAVU_006G114800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REVNMVW"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000121">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000661">
        <property type="entry name" value="Transcription repressor MYB5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB8-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999:SF9">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR MYB5-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="115"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="177"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="144"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="281" mass="31797" checksum="7630A378C23FAD4E" modified="2014-02-19" version="1">MGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNISPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLRNQGTDPKTHHKLTVPPEKKKGKKKNKQKNETKKGSSEKTLVYLPKAVRVKALSCVPRTESTFTLDSNSGSASTSQEKVQSPEEEAREVNMVWGVGSDGDNGEVGIFFGEDHDLVYSSSYVESHSDNVHTDHGTLEKLYEEYLQLLKDEEKPADELDSFAQSLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNC8</accession>
    <name>V7BNC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Wax synthase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G049600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the wax synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNC8"/>
    <dbReference type="STRING" id="3885.V7BNC8"/>
    <dbReference type="Gramene" id="ESW18538">
        <property type="protein sequence ID" value="ESW18538"/>
        <property type="gene ID" value="PHAVU_006G049600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSCR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YINRETP"/>
    <dbReference type="OrthoDB" id="1077582at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008374">
        <property type="term" value="F:O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044851">
        <property type="entry name" value="Wax_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032805">
        <property type="entry name" value="Wax_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017088">
        <property type="entry name" value="Wax_synthase_Magnoliopsida"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31595">
        <property type="entry name" value="LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31595:SF70">
        <property type="entry name" value="LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13813">
        <property type="entry name" value="MBOAT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037006">
        <property type="entry name" value="Wax_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="140"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Wax synthase" evidence="10">
        <location>
            <begin position="175"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW18538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="341" mass="39472" checksum="ABA610655D2B7F00" modified="2014-02-19" version="1">MEAEIQKFIKVWISAILGLSYCYYIAAKIPKGFFRLLSLLPILYILITFPFKISSPNLAGYTSFFLVWLATFKLILFSFNQGPLALSPPNVLHFISIASLPITPKPNTTTNKPKWLLPLKALIFAVIVAIHHNNQHLHPYLLLLLYCCHLYLGLEVVLAIVATPVRVIFGVEIESQFDEPYLSSSLQEFWGHRWNLMVSRILRPSIYDPVRRISTSFMDPSYAMLVAMFATFFVSGLMHELIYYYVIRVPPTWEVTCFFVLHGVCTVAEVATKKMVLRRRWRLHRLMSGLLVVAFLIVTANWLFFPQLLRNDMEKKCTEEYAIMINFFKSRLPLHVFKSSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSY5</accession>
    <name>V7BSY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G183400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSY5"/>
    <dbReference type="SMR" id="V7BSY5"/>
    <dbReference type="STRING" id="3885.V7BSY5"/>
    <dbReference type="Gramene" id="ESW20133">
        <property type="protein sequence ID" value="ESW20133"/>
        <property type="gene ID" value="PHAVU_006G183400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RGRS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNSCYTR"/>
    <dbReference type="OrthoDB" id="1935339at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057031">
        <property type="entry name" value="SFR19-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052650">
        <property type="entry name" value="Zinc_finger_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36886">
        <property type="entry name" value="PROTEIN FRIGIDA-ESSENTIAL 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36886:SF3">
        <property type="entry name" value="PROTEIN FRIGIDA-ESSENTIAL 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23030">
        <property type="entry name" value="SCAF11-like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="415"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="415"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="283"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="701"/>
            <end position="752"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="8"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="102"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="114"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="172"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="201"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="240"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="283"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="712"/>
            <end position="748"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="844" mass="96330" checksum="C43298AA3B529A16" modified="2014-02-19" version="1">MSLPDSPVPDDTETDPSEDEEQVEEETEEEEEEEEEEAEEEVEEEVEEEEGEEEEVEEVDEEEEVEEVEEEEEEVEEVEVEEEEVEVDEEEEVEQEVKGEEEVKEEEGEEETLEDKKERQEQKQKEAVEEEKEGQPQQQEKAVEEQKKEQQRQEEAVEEKEKEQQQQQNEAVEEKKKAQQQQHEKTVEEKKKEQQLQQEEAMEKEGRQKEEVGEDKGRKDLSLHMESKEQDKNLGPDSSVAENSDVIPSSSVHCMEENDNMLKISVPSCEILTSKKEEFHQKYDISSHSKSRENLTSVENSRSKGLEVDGENAGSLLQKETHRGYSELGCNSKANLCDDNDIDSGARASKPSSDTGQDMVIGLFPKDCLVEDANGGQNSRNNITQLEMESRDDMKQMLTRTRSLSPSAENKNRNKRPKIICDFFAKGWCIRGSSCSFLHIKDSVDKTDQEVEADLATVHQKRKLKVEEGVRENVQRIRMNEQEETPSWHPSQEKQNFKLRDNLFPENRFAFSSTSNYFSPKQDGMATLRNQHMYKGYASTFLSHSPNSRQEDFPLVSSSRAPSYPTGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIQGSNRQTSTQAPIYGDSAVVGKHMSSLNDDKSSVSSHNKVYETETNKNSVPHEKDYLPTETEITSGTYVNYQNGKIGTGQNTFGVADNTKKEGDMTEHDTRHHSEGSGHKKKRGDRDKKNHEMDVDFPMDGSMQKEVKALKMLRAALVDHVKELLKPVWHEGRLSKDEYIMIVRKSVDKVVSSIEPHQIPTIDTAKQYVSSSRVKIAKLVNGYVNKYGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT31</accession>
    <name>V7BT31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF3700 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G188400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT31"/>
    <dbReference type="SMR" id="V7BT31"/>
    <dbReference type="STRING" id="3885.V7BT31"/>
    <dbReference type="Gramene" id="ESW20193">
        <property type="protein sequence ID" value="ESW20193"/>
        <property type="gene ID" value="PHAVU_006G188400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT9K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMMPRVG"/>
    <dbReference type="OrthoDB" id="2019121at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="CDD" id="cd01910">
        <property type="entry name" value="Wali7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024286">
        <property type="entry name" value="DUF3700"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044828">
        <property type="entry name" value="TSJT1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952">
        <property type="entry name" value="ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952:SF15">
        <property type="entry name" value="NUCLEOPHILE AMINOHYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12481">
        <property type="entry name" value="DUF3700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01172">
        <property type="entry name" value="DUF3700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3700" evidence="1">
        <location>
            <begin position="2"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="252" mass="27577" checksum="4A976FA137ECA062" modified="2014-02-19" version="1">MLGIFREKLVNAPKELNSPASLNSCTKPKLSNEILKDFMSCNSSNAFSMCFGNDALLAHSPSNNPSIHHRLFSGLDDIYCVFLGGLDNLSKVNKQYGLSKGTNEAMFITEAYRTLRDRGPYPADQVLVELEGSFGFVIYDNKHGTVFVASGSNGQIGLYWGVAADGSVVISDNVDLIKASCAKSFAPFPTGCMFHSEHGLMNFEHPRRKMKAMPRIDSEGVMCGANFNVDSQAKIQMMPRVGSEANWATWGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTS4</accession>
    <name>V7BTS4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G169800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTS4"/>
    <dbReference type="Gramene" id="ESW19966">
        <property type="protein sequence ID" value="ESW19966"/>
        <property type="gene ID" value="PHAVU_006G169800g"/>
    </dbReference>
    <dbReference type="OMA" id="VASGFMQ"/>
    <dbReference type="OrthoDB" id="1363248at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="103" mass="11749" checksum="37CFEA914B156BC6" modified="2014-02-19" version="1">MMKFTLNRKRKVLIIEHIPCSKNPEDRMAKASVHQLALFMFLFLVASGFMQQAFAVNGGQCKANKDCGRYCQHRPSCPTLCLNGYCLCNCDSTKMDQKHNKPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUM0</accession>
    <name>V7BUM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">gibberellin 2beta-dioxygenase</fullName>
            <ecNumber evidence="7">1.14.11.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G092000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>gibberellin A1 + 2-oxoglutarate + O2 = gibberellin A8 + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:15005"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:58524"/>
            <dbReference type="ChEBI" id="CHEBI:58594"/>
            <dbReference type="EC" id="1.14.11.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.13" evidence="7"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUM0"/>
    <dbReference type="SMR" id="V7BUM0"/>
    <dbReference type="STRING" id="3885.V7BUM0"/>
    <dbReference type="Gramene" id="ESW21697">
        <property type="protein sequence ID" value="ESW21697"/>
        <property type="gene ID" value="PHAVU_005G092000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVEREEC"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="PhylomeDB" id="V7BUM0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045543">
        <property type="term" value="F:gibberellin 2-beta-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009685">
        <property type="term" value="P:gibberellin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000021">
        <property type="entry name" value="Gibberellin 2-beta-dioxygenase 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4 8" id="KW-0408">Iron</keyword>
    <keyword evidence="1 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="9">
        <location>
            <begin position="190"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00052204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00061282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00066708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="38554" checksum="14985F3232CE16FB" modified="2014-02-19" version="1">MDYEPPFFDVYKPLLLQNSHAVGVDVGGSGIRNDKSEWCELPLIDLSRLSLDHVEREECMKEISGAARTWGFFQVLNHGVSQELLHNLRHEQMDVFRNPFATKSRENFLNLPPRSYRWGNPFATNWSQISWSEAFHLFLPDIARMEDQHQSLRSSIEAFASVVAPLAESLVQILAQKLNIKFSYFQENCSANTCFLRLNRYPPCPLHSRVFGLLPHTDSSFLTILNQDPIGGLQLMKDGKWIGVKPNPQALVVNIGDLFQAVSNDMYISAKHQVVGGEKEERFSVAYFYNPRKDAVIESEMMPAVYRKFSFREYREQIEKDVKETGDKAGLSRFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVC1</accession>
    <name>V7BVC1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dirigent protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G032600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Secreted</location>
            <location evidence="4">Extracellular space</location>
            <location evidence="4">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the plant dirigent protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVC1"/>
    <dbReference type="SMR" id="V7BVC1"/>
    <dbReference type="STRING" id="3885.V7BVC1"/>
    <dbReference type="Gramene" id="ESW21000">
        <property type="protein sequence ID" value="ESW21000"/>
        <property type="gene ID" value="PHAVU_005G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRR3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFFFHET"/>
    <dbReference type="OrthoDB" id="1864232at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009699">
        <property type="term" value="P:phenylpropanoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.480.10">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044859">
        <property type="entry name" value="Allene_oxi_cyc_Dirigent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004265">
        <property type="entry name" value="Dirigent"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21495">
        <property type="entry name" value="NUCLEOPORIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03018">
        <property type="entry name" value="Dirigent"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0964">Secreted</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008194058" description="Dirigent protein" evidence="4">
        <location>
            <begin position="26"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW21000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="193" mass="21377" checksum="C0CA83BC0AD201E7" modified="2014-02-19" version="1">MIVTLRFLFLLSLALFSTLPTHLHASFSHQSHIELPSQTHQSWQKQTHIHFFYHDLRTADNPTIVQIIDTPKNVPYGFGTTFVVDNPMTEGPELSSKPVGRAQGIFGLASLNDLGAFMLINFAFMQGDYAGSSLSMLGRNPIAELNKEMPIVGGTGVFRFATGYAIANDLQQLSTPEHVVVEYNVTVRHSSLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWH4</accession>
    <name>V7BWH4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G067200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWH4"/>
    <dbReference type="SMR" id="V7BWH4"/>
    <dbReference type="STRING" id="3885.V7BWH4"/>
    <dbReference type="Gramene" id="ESW21395">
        <property type="protein sequence ID" value="ESW21395"/>
        <property type="gene ID" value="PHAVU_005G067200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ18">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KAACACH"/>
    <dbReference type="OrthoDB" id="1899337at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000120">
        <property type="term" value="C:RNA polymerase I transcription regulator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006360">
        <property type="term" value="P:transcription by RNA polymerase I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039495">
        <property type="entry name" value="TAF1A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36720">
        <property type="entry name" value="TAF RNA POLYMERASE I SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36720:SF1">
        <property type="entry name" value="TAF RNA POLYMERASE I SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14929">
        <property type="entry name" value="TAF1_subA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="631" mass="73005" checksum="213C3BA067FBE9E9" modified="2014-02-19" version="1">MQSVSSLASMEVDLSDTEPETINGGSKAKKSKQRKRKSFMVDEEGQMGSREKLAKKILLSLTRPSYVMGLGPKPLRKEHRTRLRYLLRRLVNQHHWVAASGVLSAYMKGTVNDTSPFRNRLKFWVLMELLKHVRNNSINPTRIKNLYDIWSKKIGSMKTWPLQSRYVVHLEFIFFCLMQGNAGEAYQLALCIEKDEADIDPVSKMMMGLTFYELWFSSIPKEFQWRNSDQFYLQENSHMETSVTNKTGQSERYNSVESHMVDSHSQHDSDASIMNDKHISRDVVFSKDMEVGTNKREKPHQNFQPEGFYLNSEEQKGFGDPFSNSGGLTEDILYGLGGLDLWLLPLHFSDESNFEEFMYMQRNQPNDYYKNSVKYLQLALNSEPSASAALLPLVQLLLIGGQVDEALNMIEKQCCNTASVLPLRVRAALLERFDRNNSVMLLSCFENILKKDPTCSDVLAKLIKMHQNGEYNLESLLEMIALHLDVTDSEHNTWKVFSSCFLRLFSYEEDCMSSCPIQTEYGHKQHRSFNKPPKIFTDGTSGKSWYLRCRWWITRHFSNSKLESEIESGDLQLLTCKAACASYMYGREFSYVEKAFSHLEKENDKELLLFLDEHRGNSLGIYKKFRKKLHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX04</accession>
    <name>V7BX04_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Nuclear transcription factor Y subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G156100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the NFYA/HAP2 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX04"/>
    <dbReference type="STRING" id="3885.V7BX04"/>
    <dbReference type="Gramene" id="ESW22474">
        <property type="protein sequence ID" value="ESW22474"/>
        <property type="gene ID" value="PHAVU_005G156100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1561">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GGNTHHF"/>
    <dbReference type="OrthoDB" id="1097733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016602">
        <property type="term" value="C:CCAAT-binding factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018362">
        <property type="entry name" value="CCAAT-binding_factor_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001289">
        <property type="entry name" value="NFYA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12632">
        <property type="entry name" value="TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02045">
        <property type="entry name" value="CBFB_NFYA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00616">
        <property type="entry name" value="CCAATSUBUNTB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00521">
        <property type="entry name" value="CBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00686">
        <property type="entry name" value="NFYA_HAP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51152">
        <property type="entry name" value="NFYA_HAP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="58"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="234"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="61"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="234"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="263"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW22474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="294" mass="32848" checksum="7428B5A14ECF3C2A" modified="2014-02-19" version="1">MNCLCEKDCGLFSSHSTSPNVLGCPSWGPSESRSLSLKVDAQPQQCHRTKTLSFQFQELDSSSTHSGQSSTKLGSSQSGQMSVEHSSTDSTHGIRSFMGNQDFTFPPPLLDHSQTLAHIAGHYADPGYSSLMASSYGSQFKHEDQKNTDEIPNVQPVETAPIRIPLQLDITEEPIYVNSKQYHAILRRRQNRAKLEVQNKPIKDRKPYLHESRHLHALKRARGAGGRFLNTKKLQQSTRTRGNTAESSMHQMKNYRDGDDNATYASNSDARNMQNHTSDKGGGTTQQHPLFVYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXX5</accession>
    <name>V7BXX5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G108900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXX5"/>
    <dbReference type="SMR" id="V7BXX5"/>
    <dbReference type="STRING" id="3885.V7BXX5"/>
    <dbReference type="Gramene" id="ESW21900">
        <property type="protein sequence ID" value="ESW21900"/>
        <property type="gene ID" value="PHAVU_005G108900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPXT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="STHHFCE"/>
    <dbReference type="OrthoDB" id="1410741at2759"/>
    <dbReference type="PhylomeDB" id="V7BXX5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051504">
        <property type="entry name" value="Plant_metabolite_acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31625">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="16"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="470" mass="53516" checksum="A01BDF8C0F13BD44" modified="2014-02-19" version="1">MAEHKLVEKSEVAPASLPSSTTRTTSSLPLSFLDLPLAGPIYVKRQFFYQFSHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLSPPPPHKPFIRCTDDDTVTLTIIESKADFNHLSSNHPKSLKELDQLLPELTFTTMHDDEDATFIFPLVALQVTVFQNQGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLLEKSPPWFGREVLKDPRGLEDIFLRDYFEERSTWKDKLIDQTPKRVCDDEEYCKATIVFGKDDIEGLKTWALAQWKKDEEFNSPQYLSKFVVICALVWASLVKTRCKDDDDEDVKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAMLRRNELKGEDGFVNAVKVIEKTVSDMKSELFKDAEHWRALFIKTFVLGTTLLVTGSPSFDVYETDFGFGRPTKVDMVHSFKCISLAQSRDEEGGVEVGLVCKSSEFEHLFYAIEQGLQTAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYS7</accession>
    <name>V7BYS7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G1329000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYS7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW22170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="17" mass="1965" checksum="22F20C14F0925915" modified="2014-02-19" version="1" fragment="single">MITYGLHTDENPYVKPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C038</accession>
    <name>V7C038_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MAPK kinase substrate protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G175700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C038"/>
    <dbReference type="STRING" id="3885.V7C038"/>
    <dbReference type="Gramene" id="ESW22718">
        <property type="protein sequence ID" value="ESW22718"/>
        <property type="gene ID" value="PHAVU_005G175700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5HJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPRFICC"/>
    <dbReference type="OrthoDB" id="689003at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031421">
        <property type="entry name" value="DUF4666"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33730:SF4">
        <property type="entry name" value="OS05G0542732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33730">
        <property type="entry name" value="OS05G0542732 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15697">
        <property type="entry name" value="DUF4666"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="115" mass="12761" checksum="96BEC2102B496E99" modified="2014-02-19" version="1">MAGLQRSAVSFRRQGSSGFVWDDKFLSEEFNKLNNQHQNNDADQTKDLQLQPPPPLQRTRTSGGARAYRTGKVSPAIEPPSPRLSACGFCAAFGKTPPRDHSKPQRTMAAKHRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0W5</accession>
    <name>V7C0W5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transmembrane protein 33 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G073300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PER33/POM33 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0W5"/>
    <dbReference type="Gramene" id="ESW23764">
        <property type="protein sequence ID" value="ESW23764"/>
        <property type="gene ID" value="PHAVU_004G073300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRE5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WSKIGRT"/>
    <dbReference type="OrthoDB" id="2017147at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071786">
        <property type="term" value="P:endoplasmic reticulum tubular network organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061024">
        <property type="term" value="P:membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051645">
        <property type="entry name" value="PER33/POM33_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005344">
        <property type="entry name" value="TMEM33/Pom33"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12703">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12703:SF4">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03661">
        <property type="entry name" value="TMEM33_Pom33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="262"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="69"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="80"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="344" mass="39689" checksum="7817E59A3A185445" modified="2014-02-19" version="1">MGEEREDPQRLKRIAADSYDYDNDSRWPDYWSNVLIPPHMASRNDVVSHFKRKFYQRYVDSDLVVEPMSLGGSSSQPARSSTTPSVTPPTNNQPRARSSASTDRTSGTTSATAGAAPLRWDRQTIMFSVNAWVFVVGFLAAIPLVPKHLSHRAYRLSFLGTTCSSLYSLYSQYGKPRAWNMQALQVYFQSIIASSDFIYFIFCLTFVTSHLCLKFALIPILCWSLEHVAKFLRRNFSRSTLYRKYLEEACVWVESNNSTLHILTSHAEIGLGFLLIISLFSWQRNIIQAFMYWQLLKLMYHVPVTAPYHQSVWAQIGRTVNPVIQRHLPFLRTPVTAIQRWWLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C125</accession>
    <name>V7C125_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G015800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW23068">
        <property type="protein sequence ID" value="ESW23068"/>
        <property type="gene ID" value="PHAVU_004G015800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAMDEWE"/>
    <dbReference type="OrthoDB" id="25838at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="7">
        <location>
            <begin position="11"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="181"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="8">
        <location>
            <begin position="435"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="9">
        <location>
            <begin position="618"/>
            <end position="734"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance N-terminal" evidence="7">
        <location>
            <begin position="1044"/>
            <end position="1134"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="1216"/>
            <end position="1384"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="8">
        <location>
            <begin position="1481"/>
            <end position="1523"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="9">
        <location>
            <begin position="1720"/>
            <end position="1837"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW23068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="2142" mass="245529" checksum="F573447DAADBF3EB" modified="2014-02-19" version="1">MAAEVVGGALLSAFLQVAFDRLASPQVVDFFRRRKLDEKLLGNLNIMLHSINALADDAELRQFKDPHVKAWLFAVKEAVFDAEDLLGEIDYELTRSQVEAQYEPQTLTYKVSNFFNSTFTSFNKKIELGMKEVLEKLEYLAKQKGALGLKEGSYSGDGSGSKVSSSSLVVESVIYGRVADKDIIINWLTSETDNPNHPSILSIVGMSGLGKTTLAQHVYNDPKIEDAKFDIKVWVCVSDHFHVLTVTRTIFEAITNQKDDSGNLEMVHKKLKENLSKRKFLLVLDDVWNERREEWEAVQTPLRYGAPGSRILVTTRGEKVASSMRSKVHLLKQLQEDECWKVFENHALKDGDIELNDELKEIGRRIVEKCNGLPLALKAIGCLLRTKSSISDWKKILESDIWELPKEHSEIIPALFLSYRYLPSHLKMCFAYCALFPKDYEFVKEELILLWMAQNFLQSPEQIRHPEEVGEEYFNDLLSRSFFQQSSFVGHFVIHDLLNDLAKYVSMDFCFRLKFDKGRCIPKTTRHFSFEFRDVKSFDGIESLGDAKRLRSFLPISQTLRHLKISIDDFLSWIQFDPQWDFKISMHDLFSKMKFLRVLSFSGFRHLEVPDSIVGGLNLHGGLSINELQNISNPLDALEANLKNKLLVKLELKWKSDHIADDPRKEKEILQNLQPSKHLEGLSIWNYNGTEFPSWVFDNSLSNLVFLKLKDCKYCLCLPPLGLLSSLKTLEIAGLDGIVSIGTEFYGSNSSFESLERLEFHNMKEWEEWECKTTSFPCLRRLYVDRFVSDEFIITGNSMETSPLETLHIDGGCDSLIIFRLDFFPKLLSLELRNCQNIRRISQEYAHNHLLNLRIYDCPEFKSFLFPKPMQILFPSLIGLQITKCPQVELFPDGGLPLDIYDMSLSCLKLIASLRENDPNTCLESLSIENLDVECFPDEVLLPRSLTSLQIRRCPNLKKMHFKGLCHLSSLTLERCPSLQCLPAEGLPKSISSLTIWDCPLLKERCRNPDGEDWTKIAHIQKLDVRSLDESHSSTSELVGGALLSAFLQVAFDRLASPQFLDFFRRRKLDEKLLGNLNIMLHSINALADDAELKQFTDPHVKAWLLAVKEAVFDAEDFLGEIDYELTRCQVEAQPEPQTYTYKVSNFINSTFSSFNKKIESGMKEVLERLEYLAKQKGALGLKKDTYSGDGSGSKVPQKLPSSSLVVESVIYGRDADKDIIINWLTSEINNPNQPSILSIVGMGGLGKTTLAQHVYNDPKIDDAKFDIKAWVYVSDHFHVLTVTKTILEAITNQKDDSGNLEMVHKKLKENMSGRKFFLVLDDVWNERREEWEAVRTPLSYGAPGSRILVTTRGEDVASNMKSIVHRLKQLGEDECWNVFKNHSLKDGNLELNDELKEIGRRIVEKCNRLPLALKTIGCLLRTKLSISDWKNILESDIWELPKEHSKIIPALFLSYHYLPSHLKRCFAYCALFPKDYEFSPQQIKHPEEVGEEYFNDLLSRSFFQQSSTKRLFVMHDLLNDLAKYVSVDFCFRLKFDKGRCIPKTSRHFLFEYGDVKSFDGFGCLTNAKRLRSFLPISLCLDFEWPFKISIHDLFSKIKFLRVLSLYGFQNLEEVPDSVGDLKHLHSLDLSYTAIKKLPDSICLLYNLLILKLNYCSELEELPLNLHKLTKLRCLEFEDTRVTKMPMHFGELKNLQVLSTFFVDRNSELSTMQLGGLGGFNLHGRLSINDVQNIFNPLDALKANVKDKHLVELELIWKSDHIPDDPRKEKKILENLQPHKHLERLSIRNYNGTEFPSWVFDNSLSNLVFLTLEDCKHCLCLPPLGLLSSLKTLIIRGLDGIVSIGAEFYGSNSSFASLYTLEFSNMKEWEEWECKTTSFPRLRELRVDECPKLKGTHLRKVVVSDELTINRNRIDTSLLETLHIDGGCNSLPIFRLDFFPKLRFLSLEKCQNLRRISQESAHNHLKQLYIDHCPQFKSFLFPKPMQIMFPSLTLLHITKCPEVVLFPDGGLPLNIKRMYLSCLKLIASLRDNLDPNTCLESLCIGNLDVECFPDEVLLPSSLTILQIGSCRNLKKMHYKGLSQLSSLTLFNCPNLECLPAEGLPKSISSLTIWNCPLLEERCQSSDGEDWGKIAHIQKLYVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1B9</accession>
    <name>V7C1B9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Dehydrogenase/reductase SDR family member 12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G089200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1B9"/>
    <dbReference type="STRING" id="3885.V7C1B9"/>
    <dbReference type="Gramene" id="ESW23939">
        <property type="protein sequence ID" value="ESW23939"/>
        <property type="gene ID" value="PHAVU_004G089200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QQWAKAN"/>
    <dbReference type="OrthoDB" id="417891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008667">
        <property type="term" value="F:2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019290">
        <property type="term" value="P:siderophore biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003560">
        <property type="entry name" value="DHB_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052992">
        <property type="entry name" value="SDR_member_12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44656">
        <property type="entry name" value="DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44656:SF7">
        <property type="entry name" value="DEHYDROGENASE_REDUCTASE SDR FAMILY MEMBER 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01397">
        <property type="entry name" value="DHBDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="234" mass="26001" checksum="F8905CC1F59DB09A" modified="2014-02-19" version="1">MKNGTFQFQLQLHFSTVTLAMVLLQTWRQTAFSVFGYLNFTKAAFLDHSRNFKPEDMEIQMPGKNCIVTGANSGIGYATAEGLAKRGATVYLVCRNKERGEAALSEIQTRTGNQNVHLEICDLSSVNEIKSFTSRFSKRNVPLHVLVNNAGILEQNRVTTPEGFELNFAVNVLGTYTITELMVPILEKASPDARVITVSSGGMYTSPLTKDLQYSDSNFNGVKQYARNKRVQVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C474</accession>
    <name>V7C474_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Pectate lyase</fullName>
            <ecNumber evidence="5 11">4.2.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G101900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>Eliminative cleavage of (1-&gt;4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.</text>
            <dbReference type="EC" id="4.2.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="11">Binds 1 Ca(2+) ion. Required for its activity.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 2/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the polysaccharide lyase 1 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.2" evidence="5 11"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C474"/>
    <dbReference type="SMR" id="V7C474"/>
    <dbReference type="STRING" id="3885.V7C474"/>
    <dbReference type="Gramene" id="ESW24090">
        <property type="protein sequence ID" value="ESW24090"/>
        <property type="gene ID" value="PHAVU_004G101900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT22">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CACKMIN"/>
    <dbReference type="OrthoDB" id="1637350at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030570">
        <property type="term" value="F:pectate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018082">
        <property type="entry name" value="AmbAllergen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002022">
        <property type="entry name" value="Pec_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045032">
        <property type="entry name" value="PEL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31683:SF74">
        <property type="entry name" value="PECTATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31683">
        <property type="entry name" value="PECTATE LYASE 18-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00544">
        <property type="entry name" value="Pectate_lyase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00807">
        <property type="entry name" value="AMBALLERGEN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00656">
        <property type="entry name" value="Amb_all"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0106">Calcium</keyword>
    <keyword evidence="6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Pectate lyase" evidence="12">
        <location>
            <begin position="2"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW24090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="236" mass="27593" checksum="E0C35A435258E15C" modified="2014-02-19" version="1">MNVIDRCWGQNPEWWRHQSQLAISFVTCACKMINNIGNDLIHYKVSHSSDDPITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQSNFYQGWLQYGIGRSMERSLKSEANPFVAPTIGNKEVTWRKGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVLRYNKHSIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C576</accession>
    <name>V7C576_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G138000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C576"/>
    <dbReference type="SMR" id="V7C576"/>
    <dbReference type="STRING" id="3885.V7C576"/>
    <dbReference type="MEROPS" id="I03.030"/>
    <dbReference type="Gramene" id="ESW24523">
        <property type="protein sequence ID" value="ESW24523"/>
        <property type="gene ID" value="PHAVU_004G138000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWSQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INVTRFM"/>
    <dbReference type="OrthoDB" id="1872570at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004866">
        <property type="term" value="F:endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011065">
        <property type="entry name" value="Kunitz_inhibitor_STI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002160">
        <property type="entry name" value="Prot_inh_Kunz-lg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107">
        <property type="entry name" value="KUNITZ TRYPSIN INHIBITOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107:SF78">
        <property type="entry name" value="NODULE CYSTEINE-RICH (NCR) SECRETED PEPTIDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00197">
        <property type="entry name" value="Kunitz_legume"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00452">
        <property type="entry name" value="STI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50386">
        <property type="entry name" value="STI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755268" evidence="1">
        <location>
            <begin position="22"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="171" mass="18457" checksum="31F20585C029CFBC" modified="2014-02-19" version="1">MTLVTLVLVVALSTNAPVGEAAGDNYYIVPASSDVGGLSLLVTGENCPLDVVAVDGYQGKQLSFVPANDKKGVICVSTDLNIYFSTCTSCPQSTWFVTTTGGVLGNPGSQTISNWFKIEKYEDAYKMVYCPSVCNYCNYPCSDIGIYQDQYGNRLALTSEPDKVQFQRVPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5N6</accession>
    <name>V7C5N6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA polymerase epsilon subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">DNA polymerase II subunit 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G144700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Participates in DNA repair and in chromosomal DNA replication.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the DNA polymerase epsilon subunit B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5N6"/>
    <dbReference type="STRING" id="3885.V7C5N6"/>
    <dbReference type="Gramene" id="ESW24605">
        <property type="protein sequence ID" value="ESW24605"/>
        <property type="gene ID" value="PHAVU_004G144700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3818">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFCEGCF"/>
    <dbReference type="OrthoDB" id="10254730at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008622">
        <property type="term" value="C:epsilon DNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042276">
        <property type="term" value="P:error-prone translesion synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007185">
        <property type="entry name" value="DNA_pol_a/d/e_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016266">
        <property type="entry name" value="POLE2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12708:SF0">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12708">
        <property type="entry name" value="DNA POLYMERASE EPSILON SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04042">
        <property type="entry name" value="DNA_pol_E_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000799">
        <property type="entry name" value="DNA_pol_eps_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA polymerase alpha/delta/epsilon subunit B" evidence="8">
        <location>
            <begin position="278"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW24605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="520" mass="58818" checksum="C1AC4AD7807D3957" modified="2014-02-19" version="1">MNASMRKKVQRNCKIRGYNLKVDALDEILSFASRFEGNEEEAIDLLLDKLDELENSLKSTIIDKDTVNRAVSLLLEVVGDDSDPGEGTGTSSAFRVIDAFHVPKFKYDTIRKQFYEHTGSLSIHGEASGKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAITTGLFSENTIVVVEGEMLLEGIFQVLTCGFPPLEDRNKSLKVLSGHDFFGGGTLTKEETIRLEEMEKRAVNDMFVILSDVWLDKEEALTKVETILDGFESVEVVPSLFVFMGNFCSRPCNLSFHSYSSLRMQFGKLGEMIAAHTRLKEQSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSIEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHSLYLYPTPHTIVLGDRSAQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C764</accession>
    <name>V7C764_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Hemerythrin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G1561001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C764"/>
    <dbReference type="STRING" id="3885.V7C764"/>
    <dbReference type="Gramene" id="ESW24741">
        <property type="protein sequence ID" value="ESW24741"/>
        <property type="gene ID" value="PHAVU_004G1561001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1940">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTWMENI"/>
    <dbReference type="OrthoDB" id="411372at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="CDD" id="cd12108">
        <property type="entry name" value="Hr-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.520">
        <property type="entry name" value="nmb1532 protein domain like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012312">
        <property type="entry name" value="Hemerythrin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35585">
        <property type="entry name" value="HHE DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_4G00730)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35585:SF1">
        <property type="entry name" value="HHE DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_4G00730)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01814">
        <property type="entry name" value="Hemerythrin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hemerythrin-like" evidence="1">
        <location>
            <begin position="52"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="Hemerythrin-like" evidence="1">
        <location>
            <begin position="303"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="55349" checksum="9AD563991588F90F" modified="2014-02-19" version="1" fragment="single">MATPLTGLQHMDGGGGVAVLANPVSKVDSSANGGGGFGRSLSESPILIFSFFHKAIRNELDALHRLAMAFATGNCSDIQPLFQRYQFLRSMYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHQGESEIFEHLFELLNSSIHNVESFPKELASCTGALQTSVSQHMAKEEEQVFPLLLEKFSLEEQASLVWQFLCSIPVNMMTKFLPWLSTSISPDESQDLRKCLSKIVPEEKLLQKVIFTWMEGRSRANNTVENCVDHSQVRCSRNPSTHQNGKIKCVCEPTATGKRKYSTCIIDVSDTMTTHPIDEILFWHNAIKKELNEIAAQTRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGKFSFSKEHAEEESQFNEFRSLIESIQSEGATSSSETEFYSTLCSHADHILETIQRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLTSSLTEDEAQMFLKNMQLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAU3</accession>
    <name>V7CAU3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">5'-nucleotidase domain-containing protein 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G122300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'(3')-deoxyribonucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAU3"/>
    <dbReference type="SMR" id="V7CAU3"/>
    <dbReference type="Gramene" id="ESW26473">
        <property type="protein sequence ID" value="ESW26473"/>
        <property type="gene ID" value="PHAVU_003G122300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2469">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="409330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07522">
        <property type="entry name" value="HAD_cN-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000076">
        <property type="entry name" value="Haloacid dehalogenase hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008380">
        <property type="entry name" value="HAD-SF_hydro_IG_5-nucl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02244">
        <property type="entry name" value="HAD-IG-Ncltidse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103">
        <property type="entry name" value="5'-NUCLEOTIDASE DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103:SF22">
        <property type="entry name" value="HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05761">
        <property type="entry name" value="5_nucleotid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW26473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="627" mass="71011" checksum="9EC8072A88EEB79F" modified="2014-02-19" version="1">MYSTDLLGFFAVHGGDATPAVAPTTPSNNKCFKIAAFTRPTSHNRVNLKSDKALTPCCYSADSNTDVFSVTSSNKSDVDYLGESTKGDLNVKSEHLEAFGIDGHGALEGPIEEVARSEARQAEDLLKDLGIPVSPSSSRESPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVVAWEGRAYDYCMENLRNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPSDLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMRHSFNRFLPNDLGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGDGLMRPCLKAQTGGLYSGGSAQMVENSLGVHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGSRSYRESLVELINQKEVVGDLFNQLRLALQRRNRDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDKKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQNLAHDSYTYYCSQLNNEHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBD7</accession>
    <name>V7CBD7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF7950 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G209000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBD7"/>
    <dbReference type="STRING" id="3885.V7CBD7"/>
    <dbReference type="Gramene" id="ESW27517">
        <property type="protein sequence ID" value="ESW27517"/>
        <property type="gene ID" value="PHAVU_003G209000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RNZZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GGNAKRC"/>
    <dbReference type="OrthoDB" id="1898295at2759"/>
    <dbReference type="PhylomeDB" id="V7CBD7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057710">
        <property type="entry name" value="DUF7950"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33595:SF7">
        <property type="entry name" value="OS12G0242500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33595">
        <property type="entry name" value="VON WILLEBRAND FACTOR A DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25821">
        <property type="entry name" value="DUF7950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7950" evidence="2">
        <location>
            <begin position="164"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="35"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="291" mass="32977" checksum="6643BBB29F84D1FB" modified="2014-02-19" version="1">MDGRGGCCIARYVPAASHVSTMDKIMLRFRPIAPKPASDASSSESSDALLKTRTSKRKCVSDINCNTKRRTRRRKNTSSPELKQKQMRKRKQPAVTLPLLPETPDRKDSPVRDLTPPIAKEAGNNYTNNSNNYLKKNVPVWLSFERRSLTRKVEPYDAMMAGCCSCVTVECVTNAWVEGEWLGSTDEERRVRLKRDTCPGLITDGYGMVTWRNEAYCEMMKGERDGAVFLVIKEGLLLPYPSFTCKVKVVQYVWGRERSSVTLPCDVWRMDSGGFVWRLDVKTALSLKLGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCS5</accession>
    <name>V7CCS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G247000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCS5"/>
    <dbReference type="SMR" id="V7CCS5"/>
    <dbReference type="STRING" id="3885.V7CCS5"/>
    <dbReference type="Gramene" id="ESW27954">
        <property type="protein sequence ID" value="ESW27954"/>
        <property type="gene ID" value="PHAVU_003G247000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0583">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CQTVVSE"/>
    <dbReference type="OrthoDB" id="193931at2759"/>
    <dbReference type="PhylomeDB" id="V7CCS5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009651">
        <property type="term" value="P:response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd14662">
        <property type="entry name" value="STKc_SnRK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000085">
        <property type="entry name" value="Serine/threonine-protein kinase SRK2E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000045">
        <property type="entry name" value="Serine/threonine-protein kinase SRK2E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24343:SF520">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24343">
        <property type="entry name" value="SERINE/THREONINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="23"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW27954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="360" mass="40920" checksum="5F61D26EBB1A8549" modified="2014-02-19" version="1">MDRAALTVGPGMDMPIMHDSDRYDLVRDIGAGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYAIPDCVQISQECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMSNQFEEPDQPMQSVDTIMQIISEATVPAAGTYTFDQLMAEQIYDLESESDAESELDIDSSGEIVYAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDM9</accession>
    <name>V7CDM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF1639 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G274400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDM9"/>
    <dbReference type="STRING" id="3885.V7CDM9"/>
    <dbReference type="Gramene" id="ESW28287">
        <property type="protein sequence ID" value="ESW28287"/>
        <property type="gene ID" value="PHAVU_003G274400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28288">
        <property type="protein sequence ID" value="ESW28288"/>
        <property type="gene ID" value="PHAVU_003G274400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYKY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWGHRKR"/>
    <dbReference type="OrthoDB" id="2018605at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012438">
        <property type="entry name" value="DUF1639"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33130">
        <property type="entry name" value="PUTATIVE (DUF1639)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33130:SF33">
        <property type="entry name" value="PUTATIVE (DUF1639)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07797">
        <property type="entry name" value="DUF1639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="261"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="9"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="182"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="285" mass="30970" checksum="56D4DECB9A026473" modified="2014-02-19" version="1">MSPFDSPQTTTESSHSMSTSTSPSGGDVLLKWGHRKRSRLSRAAIEDSSSSVQTNSRRISHSVPPNFSMPPPPPPPLVSSTASSGRGRKHSPRNLEDPSLGGSESPPRNSQGSNPVVSRSAAPKLSSSGMERSSRRVPSSGSAKFQKPSAFSTTQQASERLNNSQGDSASVQSEQEGGVATTPASSSLAANGNKLTVEVIQWPRIYIALSRKEKEDDFLAMKGTKIPQRPKKRAKNVDRILQCCFPGMWLSELTKSRYEVREKKSMKKQKRRGLKGMENLDSDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDR0</accession>
    <name>V7CDR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Dof zinc finger protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G200600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDR0"/>
    <dbReference type="STRING" id="3885.V7CDR0"/>
    <dbReference type="Gramene" id="ESW27425">
        <property type="protein sequence ID" value="ESW27425"/>
        <property type="gene ID" value="PHAVU_003G200600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RB9Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NFGSWND"/>
    <dbReference type="OrthoDB" id="1927254at2759"/>
    <dbReference type="PhylomeDB" id="V7CDR0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045174">
        <property type="entry name" value="Dof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003851">
        <property type="entry name" value="Znf_Dof"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN DOF1.4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992:SF306">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN DOF5.6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02701">
        <property type="entry name" value="Zn_ribbon_Dof"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01361">
        <property type="entry name" value="ZF_DOF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50884">
        <property type="entry name" value="ZF_DOF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 9" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 8 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Dof-type" evidence="11">
        <location>
            <begin position="56"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="22"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU369094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW27425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="35853" checksum="7C15629D9AA68582" modified="2014-02-19" version="1">MGFSSLHVCMNSSEQWLQGTIHEESRVDSSSPSGDMLPCSRPMTERRLRPSQDQALKCPRCESTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSIKKHNDHQPAINQNQTQPAGPSYIHNHKDLQHSFLDVQFSHLNNLLGTNAGVLGNPNFMDSKYSMGMLENPGPIDFMESGLDGMNMIGGSTRNLDLVENSDMSVGGGVGLGDMSGAYNGLPLNYQGLSTAAFGGMSLDGSISNVGTYIMDSCQRLMLPYEGGHNILNGSIDVKPNPKLLSLEWHDQGCSDAEKVSLGYLNGGSWSGYGSSTTNPLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDR4</accession>
    <name>V7CDR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Bicarbonate transporter-like transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G201100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the anion exchanger (TC 2.A.31.3) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDR4"/>
    <dbReference type="SMR" id="V7CDR4"/>
    <dbReference type="Gramene" id="ESW27430">
        <property type="protein sequence ID" value="ESW27430"/>
        <property type="gene ID" value="PHAVU_003G201100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1172">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YTNWTVI"/>
    <dbReference type="OrthoDB" id="1735926at2759"/>
    <dbReference type="PhylomeDB" id="V7CDR4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005452">
        <property type="term" value="F:solute:inorganic anion antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006820">
        <property type="term" value="P:monoatomic anion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050801">
        <property type="term" value="P:monoatomic ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.570:FF:000004">
        <property type="entry name" value="probable boron transporter 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.570">
        <property type="entry name" value="Helical hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011531">
        <property type="entry name" value="HCO3_transpt-like_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003020">
        <property type="entry name" value="HCO3_transpt_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11453">
        <property type="entry name" value="ANION EXCHANGE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11453:SF82">
        <property type="entry name" value="BORON TRANSPORTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00955">
        <property type="entry name" value="HCO3_cotransp"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0039">Anion exchange</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="154"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="293"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="555"/>
            <end position="582"/>
        </location>
    </feature>
    <feature type="domain" description="Bicarbonate transporter-like transmembrane" evidence="9">
        <location>
            <begin position="8"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Bicarbonate transporter-like transmembrane" evidence="9">
        <location>
            <begin position="203"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="Bicarbonate transporter-like transmembrane" evidence="9">
        <location>
            <begin position="462"/>
            <end position="603"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="671" mass="75012" checksum="836977E895AF1DEC" modified="2014-02-19" version="1">MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQTALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFIADYGVPLMILVWTAVSYIPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKIVSAARKSMQKNMNLNQLYRSMQEAYDQMQTPLAHQIPPALGLKEMKESTIQLAQSHGYIDTPVDEIVFDVDKDIDDLLPVEVKEQRLSNLLQALMVTLCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAALIETVPFKTVAMFTSFQIAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEGSGSQTATFNTSSGEILDETITRSRGEILSQKSRNSTPTSCGHTIPAYANIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF33</accession>
    <name>V7CF33_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">adenylate kinase</fullName>
            <ecNumber evidence="5">2.7.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP:AMP phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G209400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + ATP = 2 ADP</text>
            <dbReference type="Rhea" id="RHEA:12973"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.3"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the adenylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.3" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF33"/>
    <dbReference type="SMR" id="V7CF33"/>
    <dbReference type="STRING" id="3885.V7CF33"/>
    <dbReference type="Gramene" id="ESW27521">
        <property type="protein sequence ID" value="ESW27521"/>
        <property type="gene ID" value="PHAVU_003G209400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3078">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYHEQTA"/>
    <dbReference type="OrthoDB" id="439792at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004017">
        <property type="term" value="F:AMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000106">
        <property type="entry name" value="Adenylate kinase mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006259">
        <property type="entry name" value="Adenyl_kin_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007862">
        <property type="entry name" value="Adenylate_kinase_lid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01351">
        <property type="entry name" value="adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001380">
        <property type="entry name" value="PRK00279.1-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001381">
        <property type="entry name" value="PRK00279.1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05191">
        <property type="entry name" value="ADK_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Adenylate kinase active site lid" evidence="11">
        <location>
            <begin position="156"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW27521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="242" mass="26610" checksum="97F37DC7B75DBCD0" modified="2014-02-19" version="1">MANTSLEDVPSMDLMTELLRRFKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIEDAILEERITGRWIHPTSGRTYHTKFAPPKASGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGVVANLHAEKPPKEVTVEVEKVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGH5</accession>
    <name>V7CGH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF547 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G057600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGH5"/>
    <dbReference type="SMR" id="V7CGH5"/>
    <dbReference type="STRING" id="3885.V7CGH5"/>
    <dbReference type="Gramene" id="ESW29282">
        <property type="protein sequence ID" value="ESW29282"/>
        <property type="gene ID" value="PHAVU_002G057600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQTA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAQPAME"/>
    <dbReference type="OrthoDB" id="418495at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006869">
        <property type="entry name" value="DUF547"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025757">
        <property type="entry name" value="MIP1_Leuzipper"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23054:SF26">
        <property type="entry name" value="ELECTRON TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23054">
        <property type="entry name" value="TERNARY COMPLEX FACTOR MIP1, LEUCINE-ZIPPER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04784">
        <property type="entry name" value="DUF547"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14389">
        <property type="entry name" value="Lzipper-MIP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ternary complex factor MIP1 leucine-zipper" evidence="3">
        <location>
            <begin position="91"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="DUF547" evidence="2">
        <location>
            <begin position="370"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="593" mass="67330" checksum="4E43961225F4BD66" modified="2014-02-19" version="1">MMGEFDFHIVFDKDGNAQVGAYAEPQSANSRVHRRSNSASSDRNLKFSRGVVLHPLEKGYDESLVSPTSVTASRVPSPLHDNLTRNKKTFSNHRSSLEKDVEQLQLRLQQEKSMRILLEKAMGRASSTLSPGHRHFAAQTKDLIAEIELLEQEVTSREKHVLSMYRSIFEHCVSRPPSEQNSGVASPAHTKHESRKHPSIISSAFCSSKMFPLRPLQALASNNDLKNRIFGSSYAPLSCGKGKVYFGKTCPDSHKVHEKFTRVEKTPVLRTLKDHLNLCPNRLSEEMVKCMATVYCWLRSATSVNTEKSRSSTHAIRPRHGIVVEDRDCSHKSVVEISWIATRKRHSSHASYAIDNYRVLVEQLERVNISQMEHDGQIGFWINVHNALVMHAYLAYGIPQGSLKRLALFHKAAYNIGGHIISANAIEQAIFGFRTPRIGRWLESFVSAALRKKNGEEKQSKLYINDFQPLVCFALCTGALSDPVLKVYTASNIREQLNFAKREFLQANVLVKKSSKVFVPKLVERFSREASISLDDLLGWVMESVDKKLHDSIQKCLGRKSNKKSSQIIEWIPYSSRFRYMLSKDLIDKPWWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKN9</accession>
    <name>V7CKN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G173300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKN9"/>
    <dbReference type="STRING" id="3885.V7CKN9"/>
    <dbReference type="Gramene" id="ESW30674">
        <property type="protein sequence ID" value="ESW30674"/>
        <property type="gene ID" value="PHAVU_002G173300g"/>
    </dbReference>
    <dbReference type="OMA" id="CLCFAIQ"/>
    <dbReference type="OrthoDB" id="1882492at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00010">
        <property type="entry name" value="AAI_LTSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043325">
        <property type="entry name" value="LTSS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33044">
        <property type="entry name" value="BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14368">
        <property type="entry name" value="LTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755444" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="10">
        <location>
            <begin position="19"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="11">
        <location>
            <begin position="18"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF14368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="19393" checksum="5072739F431A2A64" modified="2014-02-19" version="1">MKGEMWLWLWVFVLGVGALEEGHLAAECNLLVQKVIPCLNFATGQAAVPTKECCEATLEIKKSDPKCLCFAIQQTHKGIPEAKSMGIQEGRLLQLPSACNLKNASTTNCPTIFRNGSLKINSSSTLGTAIPLSDTHKASFGTMLPPPLTPYVAALLCAILLLPIPFSSHNINLMLMPAFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKU3</accession>
    <name>V7CKU3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G178100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKU3"/>
    <dbReference type="SMR" id="V7CKU3"/>
    <dbReference type="STRING" id="3885.V7CKU3"/>
    <dbReference type="Gramene" id="ESW30734">
        <property type="protein sequence ID" value="ESW30734"/>
        <property type="gene ID" value="PHAVU_002G178100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0431">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASECHRD"/>
    <dbReference type="OrthoDB" id="1717591at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031982">
        <property type="term" value="C:vesicle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030276">
        <property type="term" value="F:clathrin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072318">
        <property type="term" value="P:clathrin coat disassembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072583">
        <property type="term" value="P:clathrin-dependent endocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000043">
        <property type="entry name" value="J-domain protein required for chloroplast accumulation response 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23172">
        <property type="entry name" value="AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23172:SF69">
        <property type="entry name" value="CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <location>
            <begin position="143"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="356"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="143"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="157"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="356"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="380"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="505" mass="56991" checksum="BBAB498958D414CF" modified="2014-02-19" version="1">MSVSSIAQTIVIIKNKARVTHCVFRQRSTSPQMNDSQRVGIGLMRGFPRRRSLEDRSSTRRRQAPFSCAGNLEAVDADDFADVFGGPPRTLLAHKISSCGSFYEEIFRAPEFTCPVAKGGRSLPVFRIPARNEAFYSDIFGSEDGRKSRERSRSLSKENSSSALSSEELSPRRPAIGDDVALCGFASKLRPINVSWRWNTSTVVPEAEEHSSKHGVPLFACNGRQLFEFQHQDNNKEFKENFRSSPLGSSRRVSSPETVSFESNSYQSVKVFTDDWELNSPFSAASSSLYQEPEARFSVREHVFSEQIVEGNDDEDEDEDDEVMSSYVIELNSNLRREECEASAVDEAIAWAKEKFQSRNSDEESSARNDSNEQTIGRQGRSDASECHRDDGIGIVHTMEKQQTEIEKLDRDIRLWSSGKRTDIRLLLSSLHHILRPESGWYAIPLMSLLESSHVKKAYQKARLCLHPDKLQQRGATSLQKYVAEKAFSILQNAWAAFISEDVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLH8</accession>
    <name>V7CLH8_PHAVU</name>
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            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G206600g</name>
    </gene>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="Gramene" id="ESW31072">
        <property type="protein sequence ID" value="ESW31072"/>
        <property type="gene ID" value="PHAVU_002G206600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="28" mass="3451" checksum="A4E3E5818B199DCB" modified="2014-02-19" version="1" fragment="single">MFTKHRMNCLMLQEAKLAFKERTIAFEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMC0</accession>
    <name>V7CMC0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G158700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7CMC0"/>
    <dbReference type="Gramene" id="ESW30508">
        <property type="protein sequence ID" value="ESW30508"/>
        <property type="gene ID" value="PHAVU_002G158700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW3V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31152">
        <property type="entry name" value="PLAC8 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31152:SF22">
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        <property type="match status" value="1"/>
    </dbReference>
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        <location>
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            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="224"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="249" mass="29085" checksum="08481C3003A5945A" modified="2014-02-19" version="1">MATQMENMRLRQNFRNIWHTDLITSNQNHIRYCCFAFWCAPCVSYMLRKRALYDDMSRYTCCAGYMPCSGRCEESKYPELCLATEVTCCFANSVASTRYLLQDEFNLQTTQCDNCFIGFISYTQQLGCVFSMIGLIVPNNRPLQKASEVLFFLANLVYCTLSISFNWTIVMMKMVDQWMLPVLNKCQLLIRHSLLCMHSHNQHMEKAMVIHMPKNVSLFFLKLFYAWFAFPSTSYMSTPYIFMTVKTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNH7</accession>
    <name>V7CNH7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PHAVU_002G264700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNH7"/>
    <dbReference type="STRING" id="3885.V7CNH7"/>
    <dbReference type="Gramene" id="ESW31752">
        <property type="protein sequence ID" value="ESW31752"/>
        <property type="gene ID" value="PHAVU_002G264700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWEW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGWAKKW"/>
    <dbReference type="OrthoDB" id="66620at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.760:FF:000016">
        <property type="entry name" value="Transmembrane protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33471">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33471:SF7">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="35512" checksum="297C151F49A81E10" modified="2014-02-19" version="1">MWVTTMAYSPLLPKPYYYHYQHQRCFNPKWTTRASSAAPGIDLNTLQSAISKKDSDAVKEALDQLGEVGWAKKWSSQPYVSRRTTSLRELTTLGIKNAENLAIPSVRNDAAFLFTVVGTTGFFAVLAGQLPGDWGFFVPYLIGSISLVVLAVGSISPGLLQAAISSFSSLFPDYQERIARHEAAHFLIAYLLGLPILGYSLDIGKEHVNLIDDRLEKLIYSGQLDAKELDRLAVVSMAGLAAEGLTYDKVIGQSADLFTLQRFLNRTKPPLSKDQQQNLTRWAVLFAASLLKNNKVLHEALMEAMAKKASVLECIQTIENAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPL2</accession>
    <name>V7CPL2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Plus3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G226300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPL2"/>
    <dbReference type="SMR" id="V7CPL2"/>
    <dbReference type="STRING" id="3885.V7CPL2"/>
    <dbReference type="Gramene" id="ESW31293">
        <property type="protein sequence ID" value="ESW31293"/>
        <property type="gene ID" value="PHAVU_002G226300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2402">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISGCYAR"/>
    <dbReference type="OrthoDB" id="166375at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016593">
        <property type="term" value="C:Cdc73/Paf1 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990269">
        <property type="term" value="F:RNA polymerase II C-terminal domain phosphoserine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.200:FF:000003">
        <property type="entry name" value="RNA polymerase-associated protein RTF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.200">
        <property type="entry name" value="Plus-3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004343">
        <property type="entry name" value="Plus-3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036128">
        <property type="entry name" value="Plus3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13115">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13115:SF8">
        <property type="entry name" value="RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03126">
        <property type="entry name" value="Plus-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00719">
        <property type="entry name" value="Plus3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159042">
        <property type="entry name" value="Plus3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51360">
        <property type="entry name" value="PLUS3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Plus3" evidence="7">
        <location>
            <begin position="269"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="433"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="20"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="74"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="112"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="162"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="176"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="226"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="236"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="654" mass="72439" checksum="ADADE653EB551A0F" modified="2014-02-19" version="1">MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPSGSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRQ4</accession>
    <name>V7CRQ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tubby C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G287800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRQ4"/>
    <dbReference type="STRING" id="3885.V7CRQ4"/>
    <dbReference type="Gramene" id="ESW32038">
        <property type="protein sequence ID" value="ESW32038"/>
        <property type="gene ID" value="PHAVU_002G287800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYHC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWKGYKS"/>
    <dbReference type="OrthoDB" id="652749at2759"/>
    <dbReference type="PhylomeDB" id="V7CRQ4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.200">
        <property type="entry name" value="LURP1-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007612">
        <property type="entry name" value="LOR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038595">
        <property type="entry name" value="LOR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025659">
        <property type="entry name" value="Tubby-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087:SF59">
        <property type="entry name" value="PROTEIN LURP-ONE-RELATED 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04525">
        <property type="entry name" value="LOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54518">
        <property type="entry name" value="Tubby C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="27106" checksum="45B90A5838B3B1C9" modified="2014-02-19" version="1">MLKRWFKEAGNKVGSGRHINKWLKIITLFHIFTQHKSFSQSNTATMAKVYPQILTSPQTHCFTSKRETYTLWLKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLALGCWEGHRCISSDFGTQEQPWFQVKRCNQMIKGKVACQISVGCQKYSIVRISGKAEAFRIVNIDGQIVAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLIMALITVYGLICGIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT25</accession>
    <name>V7CT25_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G061100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
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    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_001G061100g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 1"/>
    </dbReference>
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        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
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    </dbReference>
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        <property type="entry name" value="La_xRRM"/>
    </dbReference>
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        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="RRM_dom"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
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        <location>
            <begin position="61"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="XRRM" evidence="5">
        <location>
            <begin position="250"/>
            <end position="374"/>
        </location>
    </feature>
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        <location>
            <begin position="188"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="353"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="190"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="220"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
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            <begin position="360"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="374"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51939"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW33337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="391" mass="44411" checksum="49237D9AE2DEA655" modified="2014-02-19" version="1">MRKHLQLEEVKPAEVSEDTVKAVAQALKDSALVRVSEDGNKVGRLTELLKPEEVIEQVEIRTIAASPFQYDVKLEDVEAFFGQYAKVNSVRLPRHVGDKRFFCGTALIEFSSDEEMEFFLKKNLVYAGAELELKPKKDFDMQREKELEEHEKFRPLVGLDHQNNTNTEAVYPKGLLIAFKLKTISDEVPSEQNNPDQQTNDAHDIAKNDQQNPSEIAAEESGKKVSENYENDKEDSGVSEGKETEGEEKSKETGEKNFAAADKDNKFVVSREDLRVVFEKFGTVKYIDFKIGEESGYIRFEEPEGAQKARAAVVLSEKEGLDVKNCIAILEPVTGEAEREYWSLLRGNQEKRRGCMNNRGRGRQHGGRGGKFNRSRENESALDRPNKVRRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTE0</accession>
    <name>V7CTE0_PHAVU</name>
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        <recommendedName>
            <fullName evidence="7">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G297100g</name>
    </gene>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the WRKY group III family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW32146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_002G297100g"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1888929at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="P:leaf senescence"/>
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        <property type="project" value="UniProtKB-ARBA"/>
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        <property type="project" value="UniProtKB-ARBA"/>
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    </dbReference>
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        <property type="entry name" value="WRKY_dom_sf"/>
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        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32096:SF36">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 41-RELATED"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="7">
        <location>
            <begin position="127"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00060850"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW32146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="361" mass="41263" checksum="2FB7C00AB55A1830" modified="2014-02-19" version="1">MESEWSWEQNTLINELIQGMELARKLKEDLRMPYSVDSRDMLVQRIVSSYEKALLILRCNAPISELQATSQATATLLPESPISVHGSPLSEDVDGAIKDHKEIQHDAKKRKITPKWMDHVRVSCDSGLEGPQEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNTVLPPKSPDKQEKTHIHNIDIHHAQASQESLPKFRNIMSVNTEKLDNGDTAYPFTFPSTSSGCMKQYNHSFIPLTLENEYFLSDQYQTYLLSPTTPESNYLPSPTFQINEFDGIYNKRYSESDINEIISTNTSATNSPIPDFNFSLDPAEIDPNFPFNTPGFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTH1</accession>
    <name>V7CTH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Coiled-coil domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G005600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CWC16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTH1"/>
    <dbReference type="SMR" id="V7CTH1"/>
    <dbReference type="STRING" id="3885.V7CTH1"/>
    <dbReference type="Gramene" id="ESW32648">
        <property type="protein sequence ID" value="ESW32648"/>
        <property type="gene ID" value="PHAVU_001G005600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2990">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNMSVWD"/>
    <dbReference type="OrthoDB" id="360327at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071014">
        <property type="term" value="C:post-mRNA release spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005684">
        <property type="term" value="C:U2-type spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007590">
        <property type="entry name" value="Saf4/Yju2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12111">
        <property type="entry name" value="SPLICING FACTOR YJU2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12111:SF2">
        <property type="entry name" value="SPLICING FACTOR YJU2B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04502">
        <property type="entry name" value="Saf4_Yju2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="309" mass="35320" checksum="231C43C3D8160278" modified="2014-02-19" version="1">MSSLAAARADNFYYPPEWEPSQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWNFTMKSACCKHEIVIQTDPKNCEYLIISGAQKKTEDFDIEDAETFELPADEERGKLADPFYRLEHQEEDLKKKKESEPVLVRLQRQSDTRHSDDYALNKTLRARLRSQKKRVAEEENASKKRGLGIRLLPATEEDSATAKRVKFPTKFDKNRKDKRALINAESIFSGVSVSDKRKQELESKRRKICASSASRLLAGSFKPSSWSQAAMLSGKNKGASMTVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU90</accession>
    <name>V7CU90_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Omega-hydroxypalmitate O-feruloyl transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G089700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU90"/>
    <dbReference type="SMR" id="V7CU90"/>
    <dbReference type="STRING" id="3885.V7CU90"/>
    <dbReference type="Gramene" id="ESW33679">
        <property type="protein sequence ID" value="ESW33679"/>
        <property type="gene ID" value="PHAVU_001G089700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS3E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YCYKPPA"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050734">
        <property type="term" value="F:hydroxycinnamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052325">
        <property type="term" value="P:cell wall pectin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010345">
        <property type="term" value="P:suberin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.559.10:FF:000015">
        <property type="entry name" value="Spermidine hydroxycinnamoyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.559.10:FF:000008">
        <property type="entry name" value="Tryptamine hydroxycinnamoyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF318">
        <property type="entry name" value="OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="430" mass="47610" checksum="98FFEEEDCA724551" modified="2014-02-19" version="1">MASENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTGERGNEKAGKVLKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLSIPPVLDRSILKARNPPKIEHLHQEFADIEDKSNSNSLYEEEMVYRSFCFDPEKLKELKMKAMQDGALDACTTFEVLSAFVWIARTKALKMSPDQQTKLLFAVDGRAKFNPPLPKGYFGNGIVITNSVCRAGELTQKPLSFAVGLIQDAIKMVTDTYMRSAIDYFEVTRTRPSLTCTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPATVMKIFQDLMQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUC8</accession>
    <name>V7CUC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">B-like cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G025700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Interacts with the CDC2 protein kinase to form a serine/threonine kinase holoenzyme complex also known as maturation promoting factor (MPF). The cyclin subunit imparts substrate specificity to the complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclin family. Cyclin AB subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUC8"/>
    <dbReference type="SMR" id="V7CUC8"/>
    <dbReference type="STRING" id="3885.V7CUC8"/>
    <dbReference type="Gramene" id="ESW32885">
        <property type="protein sequence ID" value="ESW32885"/>
        <property type="gene ID" value="PHAVU_001G025700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0654">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WITEEFR"/>
    <dbReference type="OrthoDB" id="5590282at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016538">
        <property type="term" value="F:cyclin-dependent protein serine/threonine kinase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044772">
        <property type="term" value="P:mitotic cell cycle phase transition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd20506">
        <property type="entry name" value="CYCLIN_AtCycA-like_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000013">
        <property type="entry name" value="Cyclin A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000167">
        <property type="entry name" value="Mitotic cyclin 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046965">
        <property type="entry name" value="Cyclin_A/B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048258">
        <property type="entry name" value="Cyclins_cyclin-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001771">
        <property type="entry name" value="Cyclin_A_B_D_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00292">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 7" id="KW-0195">Cyclin</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin-like" evidence="9">
        <location>
            <begin position="119"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin C-terminal" evidence="10">
        <location>
            <begin position="212"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin-like" evidence="9">
        <location>
            <begin position="216"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW32885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="39688" checksum="E31D94877934B2A8" modified="2014-02-19" version="1">MASSSENRSNTTRPQREAKKRAAAAICEQLGNAKKKRVVLGDLTNVPNAVSVSDIPKRKRGKLKNIDERSDSQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVVFLARFMLSTRTHPWNSALHQLTKYKPADLKECILNIHDLYLRRRGPSLEAVREKYKQHKFKCVATTPSPPEIPLSFFEFSRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUT3</accession>
    <name>V7CUT3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 20">Peroxidase</fullName>
            <ecNumber evidence="4 20">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_001G106600g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="17 20">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="17 20">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="20">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="20">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 20"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUT3"/>
    <dbReference type="SMR" id="V7CUT3"/>
    <dbReference type="STRING" id="3885.V7CUT3"/>
    <dbReference type="Gramene" id="ESW33889">
        <property type="protein sequence ID" value="ESW33889"/>
        <property type="gene ID" value="PHAVU_001G106600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPI1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REAGPNK"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7CUT3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000007">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF59">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 17 20" id="KW-0106">Calcium</keyword>
    <keyword evidence="13 19" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 20" id="KW-0349">Heme</keyword>
    <keyword evidence="14 20" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="12 17 20" id="KW-0408">Iron</keyword>
    <keyword evidence="8 17 20" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 20" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 20" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 20" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149111" description="Peroxidase" evidence="20">
        <location>
            <begin position="20"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="21">
        <location>
            <begin position="20"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="18">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="30"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="63"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="115"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="192"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW33889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="308" mass="33740" checksum="3F6A6A294E0FA1D9" modified="2014-02-19" version="1">MKYFTTILILFFVFPFAFGDLRVGFYGSSCPRAEEIVRQVVQRRFNRDRSITAALLRMHFHDCFVRGCDASILIDSSKGNQSEKAAGANGTVRGFELIDEIKKALETACPSTVSCADIITLATRDSVAMAGGPRYDVPTGRRDSVVSRASDVALPGPRSSVSVVQQTFAANGMSLDEMVTLLGAHTVGLAHCSFFRDRLKDPNMDPGLQAKLGRICRPKNGDPTTFLDQNTSMVFDNEFYNQIVLKKGVLFIDQQLALDPLSSSLVSAFAGNSAAFQRSFIDAIVKMGKIRVLVGTDGQIRKNCRVFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUT8</accession>
    <name>V7CUT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TFIIS N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G0054001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUT8"/>
    <dbReference type="STRING" id="3885.V7CUT8"/>
    <dbReference type="Gramene" id="ESW32646">
        <property type="protein sequence ID" value="ESW32646"/>
        <property type="gene ID" value="PHAVU_001G0054001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW5B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNCGEDI"/>
    <dbReference type="OrthoDB" id="1595674at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.930.10">
        <property type="entry name" value="Conserved domain common to transcription factors TFIIS, elongin A, CRSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035441">
        <property type="entry name" value="TFIIS/LEDGF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017923">
        <property type="entry name" value="TFIIS_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47292:SF1">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47292">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08711">
        <property type="entry name" value="Med26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47676">
        <property type="entry name" value="Conserved domain common to transcription factors TFIIS, elongin A, CRSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51319">
        <property type="entry name" value="TFIIS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TFIIS N-terminal" evidence="3">
        <location>
            <begin position="73"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="284"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="425"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="486"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="546"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="606"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="773"/>
            <end position="813"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1013"/>
            <end position="1049"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="322"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="486"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="570"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="801"/>
            <end position="813"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1049" mass="113344" checksum="993ABB6B7C466C87" modified="2014-02-19" version="1">MTLEDFFTLTEMKDGLTAPSRVQELVSVMKKEQDRVVKNAGDATRQWAAVASTIAATENKDCLDLFVQSDGLWFINRWLKDAQNLGADNTNDGFIEESITAMLRAVEKLYLDSEKSISSGISVTVNNLLGHHSSKVQDRARALFEHWKGGGLGDADNSDLDRLNNESDKIVREEGQPSCVNEAGNDNHLPSQLAGDEKSLLGGSNSQLQEKVSSIQIQSIDNALQSSVSLDCEDIKEKSSHVASAQESTLREGETTLAGTCSLPITKQGSFKGQQDDLQLSDLSKKEKQDQDVNGPPEELRASDISSESAKPDPEPASTGDSEAKALESVKEEPALEHNVESNEKVVFPKISVSGSMRTPESDGMSEMDDFRATSSSNPQLPKASETDDDSCSKMLPDLSVTGSNLEKPEMSFIKSEYIIAVKEIKDQESDQDDDTSNGSDSFNQGKGHRSPNINDKSSDMEIEYGNVDALEVARLVAQEVERECVSPVKEGNDHGSNRTTNGSDSFKWRNGPKSPNVIGKSCEIELEYGMVDALEVARQVAQEVEREVSSSSEKISKGGIRQRGSLDSVGRKDEVTRILPEEVSSRQSNSAEVCSEEVGHMTVSDNVEAGPDDLDSSQVTEAAQDPGGNSEKSLCTFDLNEEVVSDDMDVSVNAMSTVPIPVVSASKPAQSSGLPMAPLQFEGTLGWKGSAATSAFRRASPRRNSDGEKNVSIGRNSEISKQRHCCLDFDLNVAEGEEGLVKQIGESSGLPSGQSSVELSPKRTNRFELDLNSIGDDGDAQPSDQRMEGPLFSGRNGYWSPSPASSSSSMQPSVRNIDLNDRPYFQTDLVESSYKRSKLDASVISILGAKVEVGRREYVPQTLSLPNGKAIEPAMDHPLSGAGGILGMGPPLSYNHSNAFGYNGLTSVPALSFSSAMYGPSGGPIPYMVDSRGTPVMPQVGGSSSTVLSSYTQPPFIVSMTRTQFGLNGVGSSHPNFDLNSGFTIDGPNRDMLTARQFFFPAQGRAIEEHVRTLPQSSSSGVSVKRKEPDGAWETYPRSYKHQQPPWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUV3</accession>
    <name>V7CUV3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G112500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUV3"/>
    <dbReference type="SMR" id="V7CUV3"/>
    <dbReference type="STRING" id="3885.V7CUV3"/>
    <dbReference type="Gramene" id="ESW33957">
        <property type="protein sequence ID" value="ESW33957"/>
        <property type="gene ID" value="PHAVU_001G112500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSYG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHGSQLY"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF139">
        <property type="entry name" value="SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="454" mass="50909" checksum="790E5E50CB67B349" modified="2014-02-19" version="1">MVTIHSSVVVVPSETTPTSNSSLSLCDQIKLPNHGSQLYIYANTGITRDSSFASAVHTLSTSLSKTLTVFHPLAGRLRRIHGGRLELLCNAKGALLVTATCNTQLSFEDLCEFAPTYAVPKINYDVPIEDVPLLGVQITRFPCGFITLGIAMCRAFLDGNSLSSFVKSWAKLARGENLDSDLIPFLDRSKLDSFKLNKPPRFEHPEFLPPPLWKTRDEEMQHELDTAMLVVTKGQVQKLKNKASDFGSGYGKVPLRGYTSFEVISGHLWRCMCKVRYSGDVCQPTRLNTLVNCRSRLRPSLPTAYFGNATFPTVTETCSFDDIMQKPLGYAVRKVREAIEKMHEEYVKSALDYIARVEDMDLLRDTFYKSARKDMEDPNLNVVVWTNFSYFETDYGWGKPVCLLPGNINSNGKAFLLDTASGDGFVLAVCLRRSYIDVLKKLFYEDIEKHASKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVH3</accession>
    <name>V7CVH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G056200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVH3"/>
    <dbReference type="STRING" id="3885.V7CVH3"/>
    <dbReference type="Gramene" id="ESW33265">
        <property type="protein sequence ID" value="ESW33265"/>
        <property type="gene ID" value="PHAVU_001G056200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUNQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QCARATI"/>
    <dbReference type="OrthoDB" id="1417505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF122">
        <property type="entry name" value="OS09G0499600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="6">
        <location>
            <begin position="19"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW33265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="702" mass="81324" checksum="3F9759CAF26352D4" modified="2014-02-19" version="1" fragment="single">ELNRSASASSTRSKNAPGNRTDVGWKHGIDINGNGKKVKCSYCSKTMSGGIFRFKHHLAGTREDSEPCCSVPEEIRDLMIKIVAEAKQASLKKRKLNIIDEDQGCEGLEERQHIFGSKGKEKVGSRGAVQATINQMMKKGYKEEVDAQVAEFFYTSAIPFNVIKNPAFTKMCEMIGKYGAGYKPPSYHDIREKLLKQAIDKTDLVLQEYKEEWKKTGCTIMSDGWTDKKRRSICNFLVNSPKGTVFMYSLDTSDISKTADKVFKMLDDVVELVGEENVVQVVTDNAANFKAAGELLMQKREHLYWTPCAAHCIDLSFEDFEKKLKVHELTIKKGRKITTYIYGRSMLISMLKKFTKERDLIRPGVTRFATAYLTLGCLHELKASLLTMFSSEEWKTSKFGTSQEGKKVENMILDNRFWKNISTCLKVAAPLMVVLRLVDSDAKPAMGFIYEEMDRAKEKIKNNFNHIKKSYEEVWKIIDARWDNQLHRPLHAAAYYLNPQFHYEPEFRSDDPEVKEGLYTSMRRLVKDAAERRIINVQLVEYHFGRGAFAMDDAKESRKTILPGEWWEMFGYRTPELKRRNHLHQKKMNDLLYVMYNLKLSNKQIRKTVALPFDDIQSDDEWITEEGDNIDEIDQVQDANVHLNPAITVPTLDAFDLENLTLMSMWMKMKMKMEMMMEMMMEMMEERISLEDWTWKFEFLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVZ5</accession>
    <name>V7CVZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G069500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVZ5"/>
    <dbReference type="SMR" id="V7CVZ5"/>
    <dbReference type="STRING" id="3885.V7CVZ5"/>
    <dbReference type="Gramene" id="ESW33440">
        <property type="protein sequence ID" value="ESW33440"/>
        <property type="gene ID" value="PHAVU_001G069500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMFYRSI"/>
    <dbReference type="OrthoDB" id="544400at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="15"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW33440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="339" mass="38551" checksum="5B9CB14BAF4ECA03" modified="2014-02-19" version="1">MPIRYTYKEIKKMAKGFGEKLDEGGYGSVFKGKLRSGSCVAIKVLQNSKGNGQDFINEVATIGTIHHQNVVHLIGYCAESSKRAIVYEFMPNGSLDKFIFSREENPHLTYDTIYNIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPTNKSVVTMTAARGTIGYMAPELFYTNIGRISYKSDVYSFGMLLMEIASKRKNLNPHAEHSSQLYFPFWIYDQLDKERDIEIQDVIEDEKKITKKMMIVSLWCIQLKPNDRPSINKVVEMLEGDIENLEIPPKPSLYPYETLKRIFSDQTTLPDFISSSSYSMEIATNAPLDASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWC8</accession>
    <name>V7CWC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transcription factor</fullName>
            <shortName evidence="4">bHLH transcription factor</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Basic helix-loop-helix protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G052200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWC8"/>
    <dbReference type="SMR" id="V7CWC8"/>
    <dbReference type="STRING" id="3885.V7CWC8"/>
    <dbReference type="Gramene" id="ESW33216">
        <property type="protein sequence ID" value="ESW33216"/>
        <property type="gene ID" value="PHAVU_001G052200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUFW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWVYAIY"/>
    <dbReference type="OrthoDB" id="1926382at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045084">
        <property type="entry name" value="AIB/MYC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025610">
        <property type="entry name" value="MYC/MYB_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11514">
        <property type="entry name" value="MYC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11514:SF43">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14215">
        <property type="entry name" value="bHLH-MYC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Transcription factor MYC/MYB N-terminal" evidence="6">
        <location>
            <begin position="32"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="236"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="236"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU369104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW33216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="286" mass="32429" checksum="6E7982CA8C49F0C6" modified="2014-02-19" version="1">MAASRPPTPQSTASSIIPLLHQSQFLPDLATLQRRLQMIFEGARERWVYAIYWRYSPTDSLFCWGNGYYHDNSKVQKTTSPTEQAQRKSVYRLFRFLTSGPSATHNYCDQDVTDPEWLFLLSPSHTFVNGSGMLGQAFFHPRTVWLTGSAQLSESACQRARQLQQSGLQTMVCIPCPNGVVELASSEVVLPNPDFVIKVRDLFNFNDPLADLTSAEIIRPREDKWLHERANIEMQNHENENLSKQSRGKEKESDSKGSWFLLSGSSNGDSHTTRSHSNDYPGPSWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWE3</accession>
    <name>V7CWE3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Inositol polyphosphate-related phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G153800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the inositol polyphosphate 5-phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWE3"/>
    <dbReference type="SMR" id="V7CWE3"/>
    <dbReference type="Gramene" id="ESW34449">
        <property type="protein sequence ID" value="ESW34449"/>
        <property type="gene ID" value="PHAVU_001G153800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0565">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MDNDMLM"/>
    <dbReference type="OrthoDB" id="62798at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004445">
        <property type="term" value="F:inositol-polyphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034485">
        <property type="term" value="F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004439">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046856">
        <property type="term" value="P:phosphatidylinositol dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.10.10:FF:000071">
        <property type="entry name" value="type I inositol polyphosphate 5-phosphatase 4 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.10.10:FF:000019">
        <property type="entry name" value="Type IV inositol polyphosphate 5-phosphatase 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045849">
        <property type="entry name" value="IP5P_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45666:SF23">
        <property type="entry name" value="PHOSPHORIC MONOESTER HYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45666">
        <property type="entry name" value="TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00128">
        <property type="entry name" value="IPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="3">
        <location>
            <begin position="225"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW34449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="556" mass="63756" checksum="C9867EB4084BB711" modified="2014-02-19" version="1">MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRVRRGKNDLDKAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTENNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPDPIVEIDADFEGSIRQKATSFFQRRSFQSLSRSLRMDNDMLMQQACLDRRFSVCDRVIFGHRASDYDPNYRWGSSDEENGIGDSPITAQYSPMSYGGCFSAEDSDRQAGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDEIRRNSDVMEILRKTRFPPVHDMGDENSPQTILDHDRIIWLGDLNYRISLSYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDLYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAETESITCNQIKKSSSSRIEVEDLFPHSHGYGYTEHYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYQ2</accession>
    <name>V7CYQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Mitochondrial Rho GTPase</fullName>
            <ecNumber evidence="14">3.6.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_001G150700g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 14">Mitochondrion outer membrane</location>
            <topology evidence="1 14">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the mitochondrial Rho GTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="14"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYQ2"/>
    <dbReference type="SMR" id="V7CYQ2"/>
    <dbReference type="STRING" id="3885.V7CYQ2"/>
    <dbReference type="Gramene" id="ESW34415">
        <property type="protein sequence ID" value="ESW34415"/>
        <property type="gene ID" value="PHAVU_001G150700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1707">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERTDMGY"/>
    <dbReference type="OrthoDB" id="10020961at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005741">
        <property type="term" value="C:mitochondrial outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007005">
        <property type="term" value="P:mitochondrion organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01892">
        <property type="entry name" value="Miro2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000011">
        <property type="entry name" value="Mitochondrial Rho GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000212">
        <property type="entry name" value="Mitochondrial Rho GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000553">
        <property type="entry name" value="Mitochondrial Rho GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000935">
        <property type="entry name" value="Mitochondrial Rho GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013566">
        <property type="entry name" value="EF_hand_assoc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013567">
        <property type="entry name" value="EF_hand_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021181">
        <property type="entry name" value="Miro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052266">
        <property type="entry name" value="Miro-EF-hand_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020860">
        <property type="entry name" value="MIRO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46819">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46819:SF1">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08355">
        <property type="entry name" value="EF_assoc_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08356">
        <property type="entry name" value="EF_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037488">
        <property type="entry name" value="Mt_Rho_GTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51423">
        <property type="entry name" value="MIRO"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 14" id="KW-0106">Calcium</keyword>
    <keyword evidence="12 14" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="8 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13 14 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 14" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7 14" id="KW-1000">Mitochondrion outer membrane</keyword>
    <keyword evidence="6 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="615"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="domain" description="Miro" evidence="16">
        <location>
            <begin position="10"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Miro" evidence="16">
        <location>
            <begin position="421"/>
            <end position="590"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRNR" id="PIRNR037488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW34415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="643" mass="71199" checksum="8ECEF5B2A98F2449" modified="2014-02-19" version="1">MANHPSFGGRSGVRVVVAGDRATGKSSLIAAIATESFPESVTPVIPPTLLPPDLYPDNVPLTVIDTPSSLDKQSKRNEELKRADAVVLTYACNDTASFSRLSSYWFPELQKLEVKVPVVVVGCKLDLRDESQQVSLERLMTQLLQQFKEIVTCIECSAATQYQVPEVFYFAQKAVLHPVDPLYDIGSQALTDRCVRALRRIFVLCDRDMDEALNEAELNDFQVRCFNVPLQSSEIAGVKSVVQQKVPEGVNSLGLTFPGFICVHNMFLKKGRPETLWAVLRNFGYDNDLKLKDDCLPVPSKHALDQSVELTGEAVEFLNGIFRLLDTDKDRALRPAEVDKLFCTAPESPWNDALYKDAAEMNDMGYLSLNGFLSQWALMTLLDPLCSLANLIYIGYSGNPAAALRVTRRRAVDRKKQATERNVFQCYVFGSKSSGKSALLDSLLGRPFSNNYIPSTVERFAVNFIELIGGARKTLVLREIPESKVSNVLSKKDYLAACDVAVFVYDSSDELSWKKSRDLLEKVARQGDLTGYRVPCLLIAAKDDLTPYLRAVQDSVKVTQELGIEAPIHVSMKLGDSSNVYNKIVHAAEHPHLSIPETEIGKKRKQYHRLLQNSLVFASVGTAMAVVGLAACRAYAVKKNSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZL0</accession>
    <name>V7CZL0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="6">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_001G144100g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates. Mediates the proteasomal-dependent degradation of ATG6, a component of the autophagosome complex. Requires TRAF1A/MUSE14 and TRAF1B/MUSE13 to target ATG6 for ubiquitination and subsequent regulation of autophagosome assembly. Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex. Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic vesicle</location>
            <location evidence="2">Autophagosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Endosome</location>
            <location evidence="3">Multivesicular body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SINA (Seven in absentia) family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="6"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZL0"/>
    <dbReference type="STRING" id="3885.V7CZL0"/>
    <dbReference type="Gramene" id="ESW34341">
        <property type="protein sequence ID" value="ESW34341"/>
        <property type="gene ID" value="PHAVU_001G144100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3002">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFTYHTR"/>
    <dbReference type="OrthoDB" id="941555at2759"/>
    <dbReference type="PhylomeDB" id="V7CZL0"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005776">
        <property type="term" value="C:autophagosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005771">
        <property type="term" value="C:multivesicular body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000785">
        <property type="term" value="P:regulation of autophagosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16571">
        <property type="entry name" value="RING-HC_SIAHs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000041">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.210.10:FF:000004">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000311">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.210.10">
        <property type="entry name" value="Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018121">
        <property type="entry name" value="7-in-absentia-prot_TRAF-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052088">
        <property type="entry name" value="E3_ubiquitin-ligase_SINA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049548">
        <property type="entry name" value="Sina-like_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008974">
        <property type="entry name" value="TRAF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013010">
        <property type="entry name" value="Znf_SIAH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10315">
        <property type="entry name" value="E3 UBIQUITIN PROTEIN LIGASE SIAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10315:SF117">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21362">
        <property type="entry name" value="Sina_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03145">
        <property type="entry name" value="Sina_TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21361">
        <property type="entry name" value="Sina_ZnF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51081">
        <property type="entry name" value="ZF_SIAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0967">Endosome</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="12" id="KW-0862">Zinc</keyword>
    <keyword evidence="10 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SIAH-type" evidence="16">
        <location>
            <begin position="114"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="22"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00054480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW34341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="34882" checksum="C4EEF608A664CB9A" modified="2014-02-19" version="1">MAPGSSVFKEVLESHLMSSDYETGKAKSEAKSNSTSTKSSVGLNGKNGVSSNNGVYELLGCSVCKNLMYPPIHQCPNGHTLCCHCKVEVHNICPSCHHELGNIRCLALEKVAESLELPCRYQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSECSVMGDIPTLVAHLKDDHKVDMHDGCTFNHRYVKANPHEVENATWMLTVFNSFGRHFCLHFEAFQLGSAPVYMAFLRFMGDDYEAKKFSYSLEVGANGRKLMWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRISGRIWRED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZW3</accession>
    <name>V7CZW3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein SIEVE ELEMENT OCCLUSION C</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G256100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZW3"/>
    <dbReference type="SMR" id="V7CZW3"/>
    <dbReference type="STRING" id="3885.V7CZW3"/>
    <dbReference type="Gramene" id="ESW35687">
        <property type="protein sequence ID" value="ESW35687"/>
        <property type="gene ID" value="PHAVU_001G256100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQNR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISHEILC"/>
    <dbReference type="OrthoDB" id="1670392at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010088">
        <property type="term" value="P:phloem development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027944">
        <property type="entry name" value="SEO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027942">
        <property type="entry name" value="SEO_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039299">
        <property type="entry name" value="SEOA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33232">
        <property type="entry name" value="PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33232:SF11">
        <property type="entry name" value="PROTEIN SIEVE ELEMENT OCCLUSION C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14577">
        <property type="entry name" value="SEO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14576">
        <property type="entry name" value="SEO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sieve element occlusion N-terminal" evidence="1">
        <location>
            <begin position="31"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Sieve element occlusion C-terminal" evidence="2">
        <location>
            <begin position="469"/>
            <end position="700"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="701" mass="80416" checksum="DAC0DEFA1E396890" modified="2014-02-19" version="1">MIEEPRKFSIVVVHFNLEFLFPFSVSNMHRENLIKKLLLTHDSDGRRLDSEAILLAVGNIMFHSSKIIVTSDLYSASFQKKDITEIETIGCSESVGFIVTKICKMLCRCSVEGDINSRVINLFDVIGKYSWDAKVVLVLAAFAVRYGEFWQLMQLYRGNNLAALVSSIKQLPCNLKPLKLQIKALTLLVETMMDVAMCIIKFEYLPLQHVEHGNHMFQVTKSQIYEAAYWIARSCLACFSQLKNFTTKQHEQVYSDSAIIAAWELSSLAYRLSGTCCNLRRQVDLCREEIERNLYQRLLDLAREEHIDNQKILTLFFPSKNYLPLKDCSTEVKFGVSELKNKVVLLLITKPQLLNPVDIFLLVQQTCDHPLNERLKKSYKIVWLPLPSSDSWTEAEESSFNFLSDSLPWHAVRKPMLLSSAVGKYIRKQWNYKDEPIMVALDSKGKVTNYNALDMINIWGSKAYPFSASKEEELWQDQNLTMQLLLDEINPLLAYWVEQGKNICLYGSENLVWIQQFNDKISELKRAGLQLETIYVGNSQLGEYVKQIMTRSGETSLSDPLSFTNVQFFWLRLASMRRSKLRLGKTPSCDHVLAELSALLKMDDREEGWAVIGSGGSTDIIRLQGMQVMEFSRKCSEWGEEDITKFGLWGAPRNILETDFVAGSCTHSYFVPSRENEELSQGTVFCQVCKRPMKKFVVYQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7D088</accession>
    <name>V7D088_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">NPH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G203800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the NPH3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D088"/>
    <dbReference type="STRING" id="3885.V7D088"/>
    <dbReference type="Gramene" id="ESW35068">
        <property type="protein sequence ID" value="ESW35068"/>
        <property type="gene ID" value="PHAVU_001G203800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSDZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IPANTHS"/>
    <dbReference type="OrthoDB" id="624345at2759"/>
    <dbReference type="PhylomeDB" id="V7D088"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.710.10:FF:000168">
        <property type="entry name" value="BTB/POZ domain-containing protein At1g03010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043454">
        <property type="entry name" value="NPH3/RPT2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027356">
        <property type="entry name" value="NPH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32370">
        <property type="entry name" value="OS12G0117600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00651">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03000">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51649">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="BTB" evidence="7">
        <location>
            <begin position="38"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="NPH3" evidence="8">
        <location>
            <begin position="211"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="539"/>
            <end position="566"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW35068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="627" mass="70149" checksum="5131FEDD5E3FB0F3" modified="2014-02-19" version="1">MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASAFALHKFPLVSRSGRIRKLLLEAKDSKVLRISLPNVPGGAEAFELAAKFCYGVNVEFTLSNVALLRCTAHFLEMTEEFAEKNLESRVEAYLRDTVLPNISSTVYVLHSCETLLPMSEEINLVNKLINAIANNACKEQLTSGLLKLDHTFPSKTTPTMEPETPSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQEMISKILMNYAHGSLQGIGVRDPQVVKGSLHDMELQKKQRVVVETIVGLLPTHSRKSPVPMGFLSSLLKAAIAAPASTPCKSDLERRISLQLDQAILEDILIPTNSPQNTHNTMYDTDSILRIFSIYLNMDEEDGEDSDNYIDESQMYDFDSPGSPKQSSITKVSKLLDSYLAEVALDSNLLPSKFTALAELLPDHARVASDGLYRAVDIFLKVHPNMKESERYRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFEQMRLRNAMNGGHNQLFFGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVCMKQELVKSHPANKLFKSFTRKLSKLNALFRINSIKPIGGKASSETRFPFPKRRRHSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0Q1</accession>
    <name>V7D0Q1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G176000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0Q1"/>
    <dbReference type="SMR" id="V7D0Q1"/>
    <dbReference type="STRING" id="3885.V7D0Q1"/>
    <dbReference type="Gramene" id="ESW34731">
        <property type="protein sequence ID" value="ESW34731"/>
        <property type="gene ID" value="PHAVU_001G176000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFSSHWN"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16469">
        <property type="entry name" value="RING-H2_RNF24-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000538">
        <property type="entry name" value="E3 ubiquitin-protein ligase MBR2 isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045191">
        <property type="entry name" value="MBR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF165"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937:SF202">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="496"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="218"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="376"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="225"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW34731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="549" mass="60593" checksum="1562C9080EE1250F" modified="2014-02-19" version="1">MGHRHVYNTSPLFEGEPDQNWNHMHIDQHYVHLGRTSTSENGSFIYPTDNMSIDSISFPSHWNSSTRSNGYASSGLNLDVPPHQPDASGTSNDHFVHSSSAGAFFTVSDNHVLQPSSNYDRQTFHVDSGFVDLTMGSGQGPHKRKSPGICPVYERGSTSRYFNAGSSTDVPIPSELWQEKPNIDSQYIPWDHFTMTPSFRGTGLSIKGEGSLRNVRSRPALDLDSNPSRTHLSTNHSHNSYPTLPPVDHSSLVDVSGQTSATLTRDWSQMNISPANGRVLLPDTSAFGLDTSHFLGGSGATVSNASVDVGCFHHDFGTSRNPAPPLSFQNNQTQTARGIQSNYSQRSTPAIRASSSLRMGHVTSLDEGLPMVAESYSSRHPRPLSTHGWRNGDRNGRSRISSQRYRSLTEESGLAERFASEGILVVERGSVYASRNMLDQHREMRMDIDNMSYEDLLALGERIGSVNTGVSEDLFSKCLTETIYCSSEQSQDEGNCVICLEDYKNMDDVGTLKTCGHDYHVNCIKKWLSMKKLCPICKASALAEDTRDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0X9</accession>
    <name>V7D0X9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Cellulose synthase-like protein D5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G211000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0X9"/>
    <dbReference type="SMR" id="V7D0X9"/>
    <dbReference type="STRING" id="3885.V7D0X9"/>
    <dbReference type="Gramene" id="ESW35150">
        <property type="protein sequence ID" value="ESW35150"/>
        <property type="gene ID" value="PHAVU_001G211000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQG2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TEHRGWF"/>
    <dbReference type="OrthoDB" id="72851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051753">
        <property type="term" value="F:mannan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000040">
        <property type="entry name" value="cellulose synthase-like protein D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14570">
        <property type="entry name" value="zf-RING_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="921"/>
            <end position="945"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="951"/>
            <end position="977"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1055"/>
            <end position="1074"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1080"/>
            <end position="1101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1113"/>
            <end position="1133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="13">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="415"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="851"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="379"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="385"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="386"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="415"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="607"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="608"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="632"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00061286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW35150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1149" mass="127992" checksum="5F0C591253C119D8" modified="2014-02-19" version="1">MVKTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSTNNPTSPLRASGGGRRLSGAGASKGGGIEEMNSEYVSYTVHIPPTPDRKPLTISEDGKGSTSFISGTIFTGGYNSVTRGHSSVEIEALPKSTSVCGNKGCDEEAMKGLCNPCECGFKICRECYFESGGNNGGGKCPGCKLLYKYASDDEDNEEGEGSEGDDQPLPLPSMAEVKLDKRFSLVKSFKAQNHPQEFDHTRWLFETKGTYGYGNAVWPKDGYGANGFGPPPDFGKKAKRPLTRKVGVSAAILSPYRMLILLRLVALGLFLTWRIRHPNHEAIWLWAMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKEQFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPEAYFGQKRDFLKNKVRLDFVRERKRVKREYDEFKVRINSLPESIRRRSNAYNAHEELRVKKKQMETDANVSEPVKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGAGDDGDNLIDATDVDIRLPMLVYVSREKRPAYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRKKIKLFLRKPKVSKKEEDEVSVPINFDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPVGSLAVPREPLDAATVAEAITVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSANNALLASPRMKFLQRVAYLNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHAAAVLQGLLKVIAGVEISFTLTSKSATPENEEDEFADLYEVKWSFLMIPPITIMMVNAIGIAVGVARTVYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKIPTIIYVWSGLLSIIISLLWVYINPPSGRTEDYMNFKFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1Z7</accession>
    <name>V7D1Z7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">T-complex protein 1 subunit epsilon</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">CCT-epsilon</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_001G256700g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Component of the chaperonin-containing T-complex (TRiC), a molecular chaperone complex that assists the folding of actin, tubulin and other proteins upon ATP hydrolysis. The TRiC complex mediates the folding of WRAP53/TCAB1, thereby regulating telomere maintenance. As part of the TRiC complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia.</text>
    </comment>
    <comment type="function">
        <text evidence="15">Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="19">Component of the chaperonin-containing T-complex (TRiC), a hexadecamer composed of two identical back-to-back stacked rings enclosing a protein folding chamber. Each ring is made up of eight different subunits: TCP1/CCT1, CCT2, CCT3, CCT4, CCT5, CCT6A/CCT6, CCT7, CCT8. Interacts with PACRG. Interacts with DNAAF4. Interacts with DLEC1. Interacts with SPMAP2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
            <location evidence="1">Microtubule organizing center</location>
            <location evidence="1">Centrosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 20">Belongs to the TCP-1 chaperonin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1Z7"/>
    <dbReference type="SMR" id="V7D1Z7"/>
    <dbReference type="STRING" id="3885.V7D1Z7"/>
    <dbReference type="Gramene" id="ESW35693">
        <property type="protein sequence ID" value="ESW35693"/>
        <property type="gene ID" value="PHAVU_001G256700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0357">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHPQMPH"/>
    <dbReference type="OrthoDB" id="10248520at2759"/>
    <dbReference type="PhylomeDB" id="V7D1Z7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005832">
        <property type="term" value="C:chaperonin-containing T-complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03339">
        <property type="entry name" value="TCP1_epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.560.10:FF:000053">
        <property type="entry name" value="T-complex protein 1 subunit delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.260.10:FF:000028">
        <property type="entry name" value="T-complex protein 1 subunit epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.7.10:FF:000003">
        <property type="entry name" value="T-complex protein 1 subunit epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.560.10:FF:000049">
        <property type="entry name" value="T-complex protein 1 subunitTheta, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="entry name" value="GroEL-like equatorial domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="entry name" value="TCP-1-like chaperonin intermediate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012718">
        <property type="entry name" value="Chap_CCT_epsi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017998">
        <property type="entry name" value="Chaperone_TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002194">
        <property type="entry name" value="Chaperonin_TCP-1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053374">
        <property type="entry name" value="TCP-1_chaperonin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054827">
        <property type="entry name" value="thermosome_alpha"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02343">
        <property type="entry name" value="chap_CCT_epsi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF041082">
        <property type="entry name" value="thermosome_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF041083">
        <property type="entry name" value="thermosome_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11353">
        <property type="entry name" value="CHAPERONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00304">
        <property type="entry name" value="TCOMPLEXTCP1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="GroEL apical domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="GroEL equatorial domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="GroEL-intermediate domain like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00750">
        <property type="entry name" value="TCP1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00751">
        <property type="entry name" value="TCP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00995">
        <property type="entry name" value="TCP1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0007">Acetylation</keyword>
    <keyword evidence="9 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12 20" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="13" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="7 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0832">Ubl conjugation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00024086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00024677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00033325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00093360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00093473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="RuleBase" id="RU004187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW35693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="535" mass="59163" checksum="2FA45A2A8563788D" modified="2014-02-19" version="1">MALAFDEFGRPFIILKEQEQKSRLRGLDAQKSNISAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEKAERLLERGIHPIRIAEGYETASRISVEHLDRVANKFEFGESNLEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIEDANIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRVQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTTEKLGKAGIVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSIAVDAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKSQQIKDNNPHFGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3NZR0</accession>
    <name>A0ACC3NZR0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001691</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU968031">
        <property type="protein sequence ID" value="KAK6645714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="316" mass="35981" checksum="355ED53E7C87E18D" modified="2026-01-28" version="1">MLLAQPIFFSPNFPTLTKKTNLRASLQPHKNFPPLRVSPMPKPLGVRTRTKTLLVPFQKKGGVQICHSLKKESEVGGNDGRDWTTSFLLFLLWAALIYYVFFLTPNQTPSRDSYFLKKLLNLKGDDGFRMNEVLVSLWYIMGLWPLVYSMLLLPTGRSSKNSIPVWPFLILSCFGGAYALLPYFVLWKPPAPPVEETQLKTWPLNFLESKVTASISLVAGVAIIIYAGLAGQDMWKEFYQYFRESKFIHITSIDFIVLSTFAPFWVYNDMTARKWFDKGSWLLPISLIPFLGPGLYLLLRPSLSTVAISQTPVEPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0S5</accession>
    <name>A0ACC3P0S5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L003800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967771">
        <property type="protein sequence ID" value="KAK6645910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="95" mass="10772" checksum="8E339C8B49EFEC40" modified="2026-01-28" version="1">MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAAANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2007-05-15" modified="2026-01-28" version="71" xmlns="https://uniprot.org/uniprot">
    <accession>A4PIT0</accession>
    <name>A4PIT0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">isoamylase</fullName>
            <ecNumber evidence="8">3.2.1.68</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">PvISA3</name>
        <name evidence="11" type="ORF">PHAVU_009G033200g</name>
    </gene>
    <organism evidence="10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2007" name="Biosci. Biotechnol. Biochem." volume="71" first="2308" last="2312">
            <title>Differential chain-length specificities of two isoamylase-type starch-debranching enzymes from developing seeds of kidney bean.</title>
            <authorList>
                <person name="Takashima Y."/>
                <person name="Senoura T."/>
                <person name="Yoshizaki T."/>
                <person name="Hamada S."/>
                <person name="Ito H."/>
                <person name="Matsui H."/>
            </authorList>
            <dbReference type="PubMed" id="17827690"/>
            <dbReference type="DOI" id="10.1271/bbb.70215"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="10">Immature seeds</tissue>
        </source>
    </reference>
    <reference evidence="11" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Hydrolysis of (1-&gt;6)-alpha-D-glucosidic branch linkages in glycogen, amylopectin and their beta-limit dextrins.</text>
            <dbReference type="EC" id="3.2.1.68"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.68" evidence="8"/>
    <dbReference type="EMBL" id="AB300054">
        <property type="protein sequence ID" value="BAF52943.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="A4PIT0"/>
    <dbReference type="SMR" id="A4PIT0"/>
    <dbReference type="STRING" id="3885.A4PIT0"/>
    <dbReference type="Gramene" id="ESW08274">
        <property type="protein sequence ID" value="ESW08274"/>
        <property type="gene ID" value="PHAVU_009G033200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0470">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INHFQWG"/>
    <dbReference type="OrthoDB" id="204980at2759"/>
    <dbReference type="BRENDA" id="3.2.1.68">
        <property type="organism ID" value="4746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019156">
        <property type="term" value="F:isoamylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11326">
        <property type="entry name" value="AmyAc_Glg_debranch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02856">
        <property type="entry name" value="E_set_GDE_Isoamylase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000054">
        <property type="entry name" value="Glycogen debranching enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="entry name" value="Golgi alpha-mannosidase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="GH13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044505">
        <property type="entry name" value="GlgX_Isoamylase_N_E_set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004193">
        <property type="entry name" value="Glyco_hydro_13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048650">
        <property type="entry name" value="ISOA1-3-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43002">
        <property type="entry name" value="GLYCOGEN DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02922">
        <property type="entry name" value="CBM_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21156">
        <property type="entry name" value="ISOA1-3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51011">
        <property type="entry name" value="Glycosyl hydrolase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Glycosyl hydrolase family 13 catalytic" evidence="9">
        <location>
            <begin position="259"/>
            <end position="666"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00066531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="BAF52943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW08274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="783" mass="88493" checksum="74A8C318D9B2041C" modified="2007-05-15" version="1">MLLQPLLCGSKVASQSTLFASVFSAENNAGRCSFTGNSSVRDVRPVRLMKQASGSITNNERGVFSEIMDRHKLKTPDAYGRRAQEGVLQEESSKVMESRPSGKIFPGQAFPLGVSEVDSGINFSIFSQHATAVTLCLVLPERGSIDTMNGDMIEVVLDPDLNKTGDIWHICIEDLPRSNVLYGYRIDGPQDWGKGHRFDNSIVLVDPYAKLVEGRRYFGDISTKLSRFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTFDESSGLDSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRRPNPRDHMINTWGYSTINFFSPMSRYASAGGGSVNASREFKEMVKALHSSGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMLDNNGQLLNFSGCGNTLNCNHAVVTELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPLNAPPIIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDYGVKGSFATRVSGSSDLYKMNKRRPYHSINFVIAHDGFTLRDLVSYNLKHNEANGEGGNDGTNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGHDTTINNFLWDQLDAQKSDHFRFFSKVIKYRHAHEVFSHESFLGKNDITWHEDNWDNHDSKFLAFTLHDRSGADIYLAFNAHEYFVKVLLPTPPEMRKWFRVGDTNLKSPEDFVLDGVHSIGNTYNIAPYSSILLEAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AD95</accession>
    <name>V7AD95_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ADP-ribosylation factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G021000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 14">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AD95"/>
    <dbReference type="SMR" id="V7AD95"/>
    <dbReference type="STRING" id="3885.V7AD95"/>
    <dbReference type="Gramene" id="ESW03527">
        <property type="protein sequence ID" value="ESW03527"/>
        <property type="gene ID" value="PHAVU_011G021000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0070">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTAIKEH"/>
    <dbReference type="OrthoDB" id="2011769at2759"/>
    <dbReference type="PhylomeDB" id="V7AD95"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04150">
        <property type="entry name" value="Arf1_5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000548">
        <property type="entry name" value="ADP-ribosylation factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045872">
        <property type="entry name" value="Arf1-5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 14" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8 14" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 11 13" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10 14" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 14" id="KW-0519">Myristate</keyword>
    <keyword evidence="5 11 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 14" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="24"/>
            <end position="31"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU369003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW03527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="195" mass="22085" checksum="DA76D1D7C7DFD036" modified="2014-02-19" version="1">MGQAFRKLFDTFFANTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLRTLWRHYFNNTDGLIYVIDSLDRERIGKAKQEFQTIINDPFMLHSIILVFANKQDLRGAMSPREVCEGLGLLDLKNRKWHIQGTCALRGDGLYEGLDWLSTTLKERRAAGYSSIGLGTSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEL7</accession>
    <name>V7AEL7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G057100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEL7"/>
    <dbReference type="STRING" id="3885.V7AEL7"/>
    <dbReference type="Gramene" id="ESW03979">
        <property type="protein sequence ID" value="ESW03979"/>
        <property type="gene ID" value="PHAVU_011G057100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTIU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGEERCT"/>
    <dbReference type="OrthoDB" id="10260946at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051179">
        <property type="entry name" value="WD_repeat_multifunction"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19857:SF21">
        <property type="entry name" value="ANAPHASE-PROMOTING COMPLEX SUBUNIT 4 WD40 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19857">
        <property type="entry name" value="MITOCHONDRIAL DIVISION PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="239"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW03979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="471" mass="52863" checksum="D691B9644BAF670E" modified="2014-02-19" version="1">MEKYLVSHRPPIEKVQRLPRHWKRSSVELNGRFERNYRHEMMDLLIRSYSEVGVFPHRYQVDGLPCQSHTNRLIGEANGSDYLPYRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFETLYSQIPESTCLQEDESKHLMHLSLGRHLDAVKWNPLNQDEVVCASVKSNEVLIFDIGYVSSDPVAVLRTRRTAAFIGSTIHIGLSDVAFTSNDPRILACDTDGAINVWDRRVNSLPCLELRSASCGTLNSIQLNADNQIIFGAGKDGLVHVWDIRGGRASATFQSLKEVRHQPVKSVKLATLLKKIGSLEAQANIVPKEIHSININPSCPYQLAFHLNDGWSGVLDINNFEVTHIHCPPPAWLNDSYVPADLSYLRKPSWLSTCSIYLAGSPCGIHLLDFYPSTNSPSHVDYKEDVQEISKRNNRRNQNRFISLSEGIISCVAHPLYNAIVAGTKKTSLLVISQKQQSFRSED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEP1</accession>
    <name>V7AEP1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G035500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="5">Protein modification.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEP1"/>
    <dbReference type="SMR" id="V7AEP1"/>
    <dbReference type="STRING" id="3885.V7AEP1"/>
    <dbReference type="Gramene" id="ESW03705">
        <property type="protein sequence ID" value="ESW03705"/>
        <property type="gene ID" value="PHAVU_011G035500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0417">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPEIAHM"/>
    <dbReference type="OrthoDB" id="7851174at2759"/>
    <dbReference type="PhylomeDB" id="V7AEP1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004842">
        <property type="term" value="F:ubiquitin-protein transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23792">
        <property type="entry name" value="UBCc_UBE2D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.110.10:FF:000001">
        <property type="entry name" value="Ubiquitin-conjugating enzyme 28, E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="8">
        <location>
            <begin position="1"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="6">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00043952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="148" mass="16505" checksum="E77891EE20DCDDF0" modified="2014-02-19" version="1">MASKRILKELKDLQRDPPTSCSAGPVGEDMFNWQATIIGPNDSPYAGGVFLVIIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLMPEIAHMCKSDKVKYESTARSWTQKYAMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF63</accession>
    <name>V7AF63_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G070600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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            <taxon>Phaseolus</taxon>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1 3">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="gene ID" value="PHAVU_011G070600g"/>
    </dbReference>
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    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="P:regulation of flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000028">
        <property type="term" value="P:regulation of photoperiodism, flowering"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="CONSTANS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31319:SF97">
        <property type="entry name" value="CCT DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31319">
        <property type="entry name" value="ZINC FINGER PROTEIN CONSTANS-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="455"/>
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        </location>
    </feature>
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        <location>
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        </location>
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        <location>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="498"/>
            <end position="511"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51017"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW04149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="523" mass="57505" checksum="7793A7ED486ADAEF" modified="2014-02-19" version="1">MQSSWTKCLAQVGSPRPVSPHKQLADAPDSTCAQVMQTKTEKVSSRWVHATEKECLELIDHLDDVAMGKDLAVGISLNMQLDHRLEELSSHRMGKGANKMSDVENMQIVKEQSNACENGQLEYNGGKTRTQENQTMNVIDFTDSNSPQAESRDLNTPNGFSGFSLTKENCCPKDHPSLELTLKRLGEVRDSKNVTGEECNVLRHSDQSAFSKYNTASSANQAQTGNVGSCSPLANGSAAPNAEVIHNFPSHSNVTPPNQQSNGSNNINDMASTNTYLGTKPCTFDKMPESVRGMGSFNSSELQTLPNNGISSSQKKTFAREEYMEIVRGQMGGSEHEFQVEHTHYELHHYNHISHKATVDLQSDHDLLLKNSPNTAQQCVSSNAFGGPAESNAANYTVDGNAVESDHGSNGQDGTLTLRTVNVENGNVAVGSIGVGGIDRKNIGNVADEGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSEPKEDKDHQSDNRVPGDNSDIPQ</sequence>
</entry>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="3">cv. G19833</strain>
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    </dbReference>
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        </location>
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    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="195" mass="22217" checksum="30382B4648B044AA" modified="2014-02-19" version="1">MTPPTYLREHVHLDTCRTLKRIRFILSNYLFQAHTLTHQSPSTGFSKASSFWPETKAKSNLQYRERESDEKKYNKNQGFFNMPFLSSLGLHLYSSNTMATKKPLNLVFFIFLVSLPFVQSSTSSEFKKTTLHFLQVVFVSVMSQTNIVGSESTQTNTEDARFGNEAASTRMVEDSAREVPTGPDPLHHNNHPIGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
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            <taxon>Fabales</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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            <strain evidence="3">cv. G19833</strain>
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        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753319" description="Acidic protein" evidence="1">
        <location>
            <begin position="25"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW04274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="11072" checksum="51A46394EA5F68AB" modified="2014-02-19" version="1">MAKSEMKSIGVVIVMMMMLGFSEADYGLSAQLTCPARCGINCLLANIAYPICFAACVAHCPKMSKDAFHCISQCGINKSININIDATGAVTKVLDSCLQNCRTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG27</accession>
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            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
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        <name evidence="2" type="ORF">PHAVU_011G106200g</name>
    </gene>
    <organism evidence="2 3">
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        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>eudicotyledons</taxon>
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            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
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        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AG27"/>
    <dbReference type="STRING" id="3885.V7AG27"/>
    <dbReference type="Gramene" id="ESW04567">
        <property type="protein sequence ID" value="ESW04567"/>
        <property type="gene ID" value="PHAVU_011G106200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXKR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHAVERH"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46553">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46553:SF3">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="9"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="15911" checksum="8D7AC2C65CB858CD" modified="2014-02-19" version="1">MAASQSEKKVVVIGIDDSEASTYAIWWTLDHFFPSPIFRLVLVHSRPAASSVSFPGPTTSAGQIFFVLDLGFQKTATKVHDAALEVVEGDPRNVLCMAVEKYHAAILVVGSHGRGALKRVVLGSVSDFCAHHANCTVMIVKKPKIKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHX0</accession>
    <name>V7AHX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1279 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G097600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHX0"/>
    <dbReference type="Gramene" id="ESW04473">
        <property type="protein sequence ID" value="ESW04473"/>
        <property type="gene ID" value="PHAVU_011G097600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4526">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIGKKAK"/>
    <dbReference type="OrthoDB" id="426386at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045866">
        <property type="entry name" value="FAM210A/B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009688">
        <property type="entry name" value="FAM210A/B-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21377:SF20">
        <property type="entry name" value="OS04G0416000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21377">
        <property type="entry name" value="PROTEIN FAM210B, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06916">
        <property type="entry name" value="FAM210A-B_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1279" evidence="1">
        <location>
            <begin position="98"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="193" mass="20688" checksum="22B7CC7674FA258C" modified="2014-02-19" version="1">MMTTSLLLPSPSCASSILSRGTNRISTPASFHTLKSHVKGFRVRALREKTEEIENPSQASSPEEVAQKYGLEAGLWKIFTSKEEGKDNSDQQNSKADQAKDLLTKYGGAYLATSITLSLISFALCYALISAGVDVQAVLQKIGISADENGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKVEKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI08</accession>
    <name>V7AI08_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pentatricopeptide repeat-containing protein-mitochondrial domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G0363001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI08"/>
    <dbReference type="STRING" id="3885.V7AI08"/>
    <dbReference type="Gramene" id="ESW03716">
        <property type="protein sequence ID" value="ESW03716"/>
        <property type="gene ID" value="PHAVU_011G0363001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMERNSM"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000678">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein MRL1 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002179">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein MRL1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000542">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053303">
        <property type="entry name" value="Chloroplast_PPR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057027">
        <property type="entry name" value="TPR_mt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47935">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47935:SF1">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23276">
        <property type="entry name" value="TPR_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="499"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="534"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="domain" description="Pentatricopeptide repeat-containing protein-mitochondrial" evidence="4">
        <location>
            <begin position="542"/>
            <end position="667"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="569"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="604"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="641"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="676"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="746"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="781"/>
            <end position="815"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1014"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW03716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1014" mass="111904" checksum="E3F2A5B4BC2D9840" modified="2014-02-19" version="1" fragment="single">MEVNLSLNRHRALSLTSRAPLSVLRSHFLASTHSLRPPPTPLSLRSRNKRTTSRNLGLLRFHSPRFVYKASLHSHSLVVLVIVVTLSAVSWLHFTLTKKKNDSLNQTRGHAKFALSPQGTNVGSQVIDGEILGFTEFQRDSALSEIGKLKDHHGEEYRVFEENEIHLPFLKSSVVQEVALAAETSESSSTVLDSGVNNNSNNNSFKVLDESFSSVGFSSSSLPPLEFAEEMVIQVEESQDKVDSDPELSLNNVESEHTASSVRVNNALATVGGHTKEKIEFGSINGDVVFGESVREGLYMFYEVNKPATGSMTPLSGLKPLSPRASFMNKKRSPSVMGNVTLKGTGLSTDIPLQNAEHVKGAAEVSSHKDGYPLQHVSKNLRRGRSFSGDRERTNMDYNNNTVFPQNTTLSMKMHIDLKNDQIMVHDDQKNVPSEHLSKYNNLLKVGRLHECVELLKHMETKGLLDMTKVYHAKFFNICKKRKAVNEAFDYIMLIPNPTLSTFNMLMSVCASSQDSERAFHVLQLLKNAQLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEMQPMDPDHVTIGALLKACTKAGQVERAKEVYKMLQKYNIKGCPEVYTIAINSCSQTGDWEFALAVYNDMTQKGILPDEIFLSALIDVAGHAKDLDAAFDVLQEAREGGIRIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLRMTVSTINALLTALCDGDQFHKAMEIFFEMKGLGLSPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGVVTNLIICRCIIGMCLRRFEMACSAGEPVLSFHSGRPQVDNKWTSLAIMVFRETIEAGQKPTSEILSQILGCLQLPYDTSLKNRLVENLGVSAETSRGSNLCSLMEGFGEYDPRAFSILEESASYGLVPSVSFKMSPIVIDVKELHVSTAEVYIITVLKGLKHRLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKN2</accession>
    <name>V7AKN2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G178300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKN2"/>
    <dbReference type="SMR" id="V7AKN2"/>
    <dbReference type="Gramene" id="ESW05428">
        <property type="protein sequence ID" value="ESW05428"/>
        <property type="gene ID" value="PHAVU_011G178300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1433600at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051826">
        <property type="entry name" value="E3_ubiquitin-ligase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22765:SF434">
        <property type="entry name" value="GB|AAD18119.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22765">
        <property type="entry name" value="RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="100"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW05428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="146" mass="16954" checksum="58912EF6E32CFD0D" modified="2014-02-19" version="1">MEMQWSIVDDGYIIDLMDLGHRSNTNNNINSEFLRSTEDSGVYIFDSMNLGHNNNMQNNGNRTLRSTQDGVFIFDSMQNNHISFQNLERFKIEEKREGSCCICLGDFSIGSRAIRMPQPCSHTFHQHCITKWFNISHTCPLCRRNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMU9</accession>
    <name>V7AMU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Gnk2-homologous domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G079800g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell junction</location>
            <location evidence="12">Plasmodesma</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the cysteine-rich repeat secretory protein family. Plasmodesmata-located proteins (PDLD) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMU9"/>
    <dbReference type="SMR" id="V7AMU9"/>
    <dbReference type="STRING" id="3885.V7AMU9"/>
    <dbReference type="Gramene" id="ESW06824">
        <property type="protein sequence ID" value="ESW06824"/>
        <property type="gene ID" value="PHAVU_010G079800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU9X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RYWEAGY"/>
    <dbReference type="OrthoDB" id="1097929at2759"/>
    <dbReference type="PhylomeDB" id="V7AMU9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000011">
        <property type="entry name" value="Cysteine-rich repeat secretory protein 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000001">
        <property type="entry name" value="cysteine-rich repeat secretory protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051378">
        <property type="entry name" value="Cell2Cell_Antifungal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32080">
        <property type="entry name" value="ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32080:SF2">
        <property type="entry name" value="PLASMODESMATA-LOCATED PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0965">Cell junction</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="264"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="15">
        <location>
            <begin position="40"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="15">
        <location>
            <begin position="149"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW06824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="31223" checksum="BCB79F523D61E73A" modified="2014-02-19" version="1">MFITLQLDSTHIIILALKLSYLLFLFSSIPNALGYTTRAHIFIYAGCSQEKYQQNTPFEANLNSFLSSVSGSSSDNSYNSFAIGNGSSSPPEGSIYGLYQCRSDLRPNDCSKCVKSCVNQIGLVCPLALGASLQLEGCYIRYEHADFLGKPDTSLWYKKCSKAVTNDAEFFRRRDDVLSDLQAANGFGVSTSGFVEGFALCLGDLNVADCSSCLQAAVGQLRSICGSAASADVFLAQCYARYWEAGYYDEAESSNEDDQVGKSVAIIVGVLAGLAILVVLLSIFRRAFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANA2</accession>
    <name>V7ANA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G198400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANA2"/>
    <dbReference type="Gramene" id="ESW05656">
        <property type="protein sequence ID" value="ESW05656"/>
        <property type="gene ID" value="PHAVU_011G198400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SERVHIR"/>
    <dbReference type="OrthoDB" id="1408525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="7">
        <location>
            <begin position="15"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="172"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="8">
        <location>
            <begin position="428"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="9">
        <location>
            <begin position="681"/>
            <end position="805"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1187" mass="135212" checksum="37894FD242CCB7F3" modified="2014-02-19" version="1">MPVIETLGGALFGAVLQVLFDRLDSRQVVDYFLGRKLDVKLLKKLKRKLVSVYAVVDDAEQKQFRDTYVKAWLDEVRDVLLDTEDLMDEIEYEFSRSELEVQSQSSSSKVCSFESKIVEVLDDLESLLSQKDDLGLKNASGAGVGLGLSSNVSQKLPSTSLVVENVIYGRDDEKEMILKWMTSDTEEHSQLSILSVVGMGGMGKTTLAQHVYNDPMIEGKFAIKGWVCVSDEFDVFMVTKAIVGAITKSKDDSVDLEMVQGRLKEKLTGRKFLLVLDDVWNEHQDQWKSLQTPFKYGAKGSKIIITTRSNKVASIMESNKIRQLKQLQEDHSWQVFAKHAFQNDNSKPNSELKEIGTKIVEKCQGLPLALETVGSLLRSKSSVSEWESVLRSNIWNLRIEDSKILPALLLSYYHLPSHLKTCFAYCALFPKDHKFEKESLILSWMVQNFLQCSQQSDSLEEIGEQYFNDLLSRSFFQQSNWFGKTRFLMHDLLNDLAKYVSGDIYYRLGVDRPGSVPKTTRHFSTKEKDPVECDEYRSLCDAKRLRTFLSISTNCGMSIKELISNFKFLRHLSLSCCRNIKEMPDTITDLIHLRSLDLSGTSIERLPDSMCSLCNLQVLKLNYCRLLKELPSTLHELSKLRLLELKGTTLRKAPVLLGKLKNLQVWMGGFEVGKSSSEFSIQELGQLDLHGKLSIENLENIVNPCDALAADLKNKTHLVMLVLKWNLKRNNEDSIKQREVLENLEPSRHLEFLSINGYCGTQFPRWLSDTFVLNVVSLSLYKCKYCQWLPSLGLLTSLKGLVIRRLDEIVRIDADFYGNTSSAFASLERLTFIDMKEWEEWQCMTGAFPSLQFLSLQNCPKLKGHLPDLPHLKDLFITRCRQLVASTPSGLEIEGVEMETSSFDMIGHHLKSLRISICPGMNIPINHCYHFLVNLEIFECCDSLTKFPLDLFPKLHKLNLSNCRNLQIMSQEHPHHHLKSLSIYHCSEFESFPNEGLLAPQIQRIFITKTEKLKSMPKRMSDLLPSLAYLFIRDCPGVELSEGCLPSNIKEMRLLNCSKLVASLKKGGWGTNPSIQLLSINEVDGECFPDEGFLPLSITQLDVKDCPKLKKLDYRGLCHLSSLQILFIENCPILQCLPEEGLPESISELRIESCPLLKQQCKKEEGEDWIKIAHIKAIWVDWKPVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="67" xmlns="https://uniprot.org/uniprot">
    <accession>V7APZ0</accession>
    <name>V7APZ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">25.3 kDa vesicle transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G126000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the synaptobrevin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APZ0"/>
    <dbReference type="SMR" id="V7APZ0"/>
    <dbReference type="STRING" id="3885.V7APZ0"/>
    <dbReference type="Gramene" id="ESW07390">
        <property type="protein sequence ID" value="ESW07390"/>
        <property type="gene ID" value="PHAVU_010G126000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0862">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIYWRFF"/>
    <dbReference type="OrthoDB" id="1719357at2759"/>
    <dbReference type="PhylomeDB" id="V7APZ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005484">
        <property type="term" value="F:SNAP receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006890">
        <property type="term" value="P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14824">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15866">
        <property type="entry name" value="R-SNARE_SEC22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000028">
        <property type="entry name" value="25.3 kDa vesicle transport protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.50:FF:000003">
        <property type="entry name" value="25.3 kDa vesicle transport protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.50">
        <property type="entry name" value="Longin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010908">
        <property type="entry name" value="Longin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044565">
        <property type="entry name" value="Sec22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042855">
        <property type="entry name" value="V_SNARE_CC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45837">
        <property type="entry name" value="VESICLE-TRAFFICKING PROTEIN SEC22B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13774">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00957">
        <property type="entry name" value="Synaptobrevin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01270">
        <property type="entry name" value="Longin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50859">
        <property type="entry name" value="LONGIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50892">
        <property type="entry name" value="V_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Longin" evidence="14">
        <location>
            <begin position="6"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="V-SNARE coiled-coil homology" evidence="15">
        <location>
            <begin position="135"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW07390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="18">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="218" mass="25477" checksum="63B4535AA44D6270" modified="2014-02-19" version="1">MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQVKALFKNLSRGHYEASRMSVETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEELRNEFERVNGSQIETAARPYAFIKFDTFIQKTKKLYQDTHTQRNISKLNDELYEVHQIMTRNVQDVLGVGEQLDQVSQMSSRLSSESRVYADKARDLNRQALIRKWAPVAIVFGVVFVLFWIKNKIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQB6</accession>
    <name>V7AQB6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G136300g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="17" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the DEAD box helicase family. eIF4A subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQB6"/>
    <dbReference type="SMR" id="V7AQB6"/>
    <dbReference type="STRING" id="3885.V7AQB6"/>
    <dbReference type="Gramene" id="ESW07514">
        <property type="protein sequence ID" value="ESW07514"/>
        <property type="gene ID" value="PHAVU_010G136300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07515">
        <property type="protein sequence ID" value="ESW07515"/>
        <property type="gene ID" value="PHAVU_010G136300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0327">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AINMVIF"/>
    <dbReference type="OrthoDB" id="10265785at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17939">
        <property type="entry name" value="DEADc_EIF4A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000089">
        <property type="entry name" value="Eukaryotic initiation factor 4A-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000031">
        <property type="entry name" value="Eukaryotic initiation factor 4A-III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="4 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="15">
        <location>
            <begin position="40"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="13">
        <location>
            <begin position="71"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="14">
        <location>
            <begin position="252"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="11">
        <location>
            <begin position="40"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW07515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="46660" checksum="FC8BD5C7E74DE511" modified="2014-02-19" version="1">MAGLAPEGTQFDGRQYDAKMSELLSTDGQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDSRMLSDIQKFYNVTVEELPSNVADLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARU8</accession>
    <name>V7ARU8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G013000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARU8"/>
    <dbReference type="SMR" id="V7ARU8"/>
    <dbReference type="STRING" id="3885.V7ARU8"/>
    <dbReference type="MEROPS" id="C01.A13"/>
    <dbReference type="Gramene" id="ESW08035">
        <property type="protein sequence ID" value="ESW08035"/>
        <property type="gene ID" value="PHAVU_009G013000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4296">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGETCCC"/>
    <dbReference type="OrthoDB" id="10253408at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008234">
        <property type="term" value="F:cysteine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02248">
        <property type="entry name" value="Peptidase_C1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.25.160:FF:000002">
        <property type="entry name" value="Cysteine protease 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000067">
        <property type="entry name" value="Senescence-specific cysteine protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.160">
        <property type="entry name" value="Granulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000118">
        <property type="entry name" value="Granulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037277">
        <property type="entry name" value="Granulin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025661">
        <property type="entry name" value="Pept_asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000169">
        <property type="entry name" value="Pept_cys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025660">
        <property type="entry name" value="Pept_his_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013128">
        <property type="entry name" value="Peptidase_C1A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000668">
        <property type="entry name" value="Peptidase_C1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039417">
        <property type="entry name" value="Peptidase_C1A_papain-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013201">
        <property type="entry name" value="Prot_inhib_I29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12411">
        <property type="entry name" value="CYSTEINE PROTEASE FAMILY C1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00396">
        <property type="entry name" value="Granulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08246">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00112">
        <property type="entry name" value="Peptidase_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00705">
        <property type="entry name" value="PAPAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00277">
        <property type="entry name" value="GRAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00848">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00645">
        <property type="entry name" value="Pept_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57277">
        <property type="entry name" value="Granulin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00640">
        <property type="entry name" value="THIOL_PROTEASE_ASN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00139">
        <property type="entry name" value="THIOL_PROTEASE_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00639">
        <property type="entry name" value="THIOL_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0788">Thiol protease</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5018666608" evidence="8">
        <location>
            <begin position="21"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="Cathepsin propeptide inhibitor" evidence="11">
        <location>
            <begin position="27"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase C1A papain C-terminal" evidence="10">
        <location>
            <begin position="115"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Granulins" evidence="9">
        <location>
            <begin position="344"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW08035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="47976" checksum="2D67767521CD10EF" modified="2014-02-19" version="1">MKLFFSLIILFTLYLPFASASDTSDLFERWCKEHAKTYSSEEEKRYRFHVFEDNYAFVSQHNRNANDNNSTYTLSLNAFADLTHHEFKTSRLGFSPSLLRFKRVQNQQPRHLLHNPSQIDWRQSGAVTPVKDQASCGACWAFSATGAIEGINKIVTGSLESLSEQELVDCDTSYNSGCEGGLMDYAYQFVIDNKGIDTEDDYPYQARQRPCNKDKLKRHIVTIDDYVDLPPNEEELLKAVASQPVSVGICGSERAFQLYSQGIFSGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGKYWGMEGYIHMIRNTGDPKGICGINTLASYPIKTKPNPPPPPAPVRCNLFTHCSEGETCCCAKSFLGICFSWKCCGLTSAVCCKDKRHCCPRDYPICDTEKSQCLKITNGTTTITSGNKDISNKPRGWKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATA6</accession>
    <name>V7ATA6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GAG1At protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G162500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATA6"/>
    <dbReference type="STRING" id="3885.V7ATA6"/>
    <dbReference type="Gramene" id="ESW07833">
        <property type="protein sequence ID" value="ESW07833"/>
        <property type="gene ID" value="PHAVU_010G162500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S43U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLMNRGT"/>
    <dbReference type="OrthoDB" id="1881135at2759"/>
    <dbReference type="PhylomeDB" id="V7ATA6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35990">
        <property type="entry name" value="GAG1AT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35990:SF1">
        <property type="entry name" value="GAG1AT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="83" mass="9038" checksum="2BCBAFD237EB23FF" modified="2014-02-19" version="1">MSSDTKTNGGGNGGGGFRSKVNHYLHSGEKKHVFVGLTLITAVFTIPWFLMNRGSKHQSHQDYLEKADKARSERLSSSSASAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUF8</accession>
    <name>V7AUF8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G164200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUF8"/>
    <dbReference type="STRING" id="3885.V7AUF8"/>
    <dbReference type="Gramene" id="ESW07856">
        <property type="protein sequence ID" value="ESW07856"/>
        <property type="gene ID" value="PHAVU_010G164200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQFG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACAKYKF"/>
    <dbReference type="OrthoDB" id="1647530at2759"/>
    <dbReference type="PhylomeDB" id="V7AUF8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48155:SF1">
        <property type="entry name" value="F-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48155">
        <property type="entry name" value="OS09G0497600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="247" mass="28601" checksum="6865339B12166DCE" modified="2014-02-19" version="1">MEENKRDEEEGVCEIGKVPDDVLIEIFLRGGVSEWEQIACVNKHFAYLLSSNCECFWQAVISHHYPLMADPSLPLPWLGPIPLPNNSKTRFTALYITQCIFASQPHDPQLDHHFHEIIGHTYLFLRQQLQPFIMPPHSGILHGTIIDQFIASGKSRDIAHQLASRVWLAVIQNLDHSDHTFSLLKRLAREGDVVLPYPYTRSFKVQWKVFEKLFTDFRGSFSKSDYYDMLACVKSRFQNIPAVWLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUX1</accession>
    <name>V7AUX1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G1281002g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUX1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="21" mass="2280" checksum="AB6917273E877C8D" modified="2014-02-19" version="1" fragment="single">ALSTLSSVSQGDLRRAITYLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUZ4</accession>
    <name>V7AUZ4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G101800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUZ4"/>
    <dbReference type="STRING" id="3885.V7AUZ4"/>
    <dbReference type="Gramene" id="ESW09120">
        <property type="protein sequence ID" value="ESW09120"/>
        <property type="gene ID" value="PHAVU_009G101800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4210">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FKSRSCY"/>
    <dbReference type="OrthoDB" id="696276at2759"/>
    <dbReference type="PhylomeDB" id="V7AUZ4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051992">
        <property type="entry name" value="OxStress_Response_Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33172">
        <property type="entry name" value="OS08G0516900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33172:SF91">
        <property type="entry name" value="PROTEIN OXIDATIVE STRESS 3 LIKE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="147"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="164"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="198"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="28059" checksum="50A7B46DCB2A4627" modified="2014-02-19" version="1">MEVLLGPAFTIDVPASPPLDGNSEDRIFLNGSPENDRSNFRISGPSKFFTGGESESSSSIGTPDDSDNEEEEVQSKLKIRTGLGSLNAMEDSLPIKRGLSSHFDGKSKSFSDLSQVSALKELQKQESPFNKRRRVLIASKWSRRSSFYSWSNPQSMPLLPVVEDRDDDDDDYEEEEEEEEEKARKIPSASSSSSSSLAEEKKPEDQVQLRLNRVPESYAAHMRLRLGSFKSRSFSLADLQEHDDEEEDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXH2</accession>
    <name>V7AXH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nuclear nucleic acid-binding protein C1D</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G086600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer and homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
            <location evidence="6">Nucleolus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the C1D family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXH2"/>
    <dbReference type="SMR" id="V7AXH2"/>
    <dbReference type="STRING" id="3885.V7AXH2"/>
    <dbReference type="Gramene" id="ESW08931">
        <property type="protein sequence ID" value="ESW08931"/>
        <property type="gene ID" value="PHAVU_009G086600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4835">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QRENMRN"/>
    <dbReference type="OrthoDB" id="1421013at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000178">
        <property type="term" value="C:exosome (RNase complex)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000460">
        <property type="term" value="P:maturation of 5.8S rRNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011082">
        <property type="entry name" value="Exosome-assoc_fac/DNA_repair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007146">
        <property type="entry name" value="Sas10/Utp3/C1D"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15341:SF3">
        <property type="entry name" value="NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15341">
        <property type="entry name" value="SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04000">
        <property type="entry name" value="Sas10_Utp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="127"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="187"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="200"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="211" mass="23428" checksum="3F871FB66176F32E" modified="2014-02-19" version="1">MVKVSESGAVPEAVMDAANTTLSNLQLLRTHFNDFLSLSDPQILSQMPPLQRAHALFILAKITSTLLALNLRCTGVHPDDHPIKSELDRIHLYEDKLERLVDLSKAPLQPSTTLNYQAATRFIEHSLPDLTSEQRENMRNISRGDRTKTNLPGRAGQKRKYQSSDKQSVKAAAKDFLEKAARELLGANSSGIKGPLQVDMSEDDDDKQPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYA2</accession>
    <name>V7AYA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Glycosyltransferases</fullName>
            <ecNumber evidence="13">2.4.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G107900g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Golgi apparatus membrane</location>
            <topology evidence="1 13">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the glycosyltransferase 43 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.-.-" evidence="13"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYA2"/>
    <dbReference type="SMR" id="V7AYA2"/>
    <dbReference type="STRING" id="3885.V7AYA2"/>
    <dbReference type="Gramene" id="ESW09191">
        <property type="protein sequence ID" value="ESW09191"/>
        <property type="gene ID" value="PHAVU_009G107900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW09192">
        <property type="protein sequence ID" value="ESW09192"/>
        <property type="gene ID" value="PHAVU_009G107900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1476">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIGFTPP"/>
    <dbReference type="OrthoDB" id="675023at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015018">
        <property type="term" value="F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042285">
        <property type="term" value="F:xylosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010417">
        <property type="term" value="P:glucuronoxylan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009834">
        <property type="term" value="P:plant-type secondary cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00218">
        <property type="entry name" value="GlcAT-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000064">
        <property type="entry name" value="Glycosyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005027">
        <property type="entry name" value="Glyco_trans_43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10896:SF20">
        <property type="entry name" value="BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10896">
        <property type="entry name" value="GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03360">
        <property type="entry name" value="Glyco_transf_43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8 13" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="12" id="KW-0464">Manganese</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR605027-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU363127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW09191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="433" mass="49290" checksum="D75B09CD03FB48FF" modified="2014-02-19" version="1">MASIRRTLSPVARAGTATNVEVCSVASPLSKSSSSPQNWSPLVGLDYRAFVFGAFSPRSFRGLERSKPRGQLWRKVLFHFFICFVVGVSIGLIPLASIHMSMNFMPKHRAFSFEVISATGNFQQLENVAINVAPSINETVNFNASLYVTAKEPELIDEVAYNISNSQISEHSHVVSQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVSPPMLWIVVEMTSQSEETADILRSSGIMYRHLICKTNITDPNHRSILQRNIAMAHIEAHRLDGIVYFADDDNIYSVELFQQMREIRRFGTWTVARLSGDKSRFVLQGPICNGSQVIGWHTYESNGKSKRFHAEMSGFAFNSTILWDPKKWHRPTLEPIRQLDSVKESLRVSTLIEQVIEDESQMEGLMDNCSRVMVWHIDLESSYSSYPQKWILKNNLDAIFQLPLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ33</accession>
    <name>V7AZ33_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mitochondrial import inner membrane translocase subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G163100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Heterohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Intermembrane side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="1">The twin CX3C motif contains 4 conserved Cys residues that form 2 disulfide bonds in the mitochondrial intermembrane space.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the small Tim family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ33"/>
    <dbReference type="SMR" id="V7AZ33"/>
    <dbReference type="STRING" id="3885.V7AZ33"/>
    <dbReference type="Gramene" id="ESW09868">
        <property type="protein sequence ID" value="ESW09868"/>
        <property type="gene ID" value="PHAVU_009G163100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3489">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEICWDK"/>
    <dbReference type="OrthoDB" id="344165at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.810">
        <property type="entry name" value="Mitochondrial import inner membrane translocase subunit tim13 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004217">
        <property type="entry name" value="Tim10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035427">
        <property type="entry name" value="Tim10-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02953">
        <property type="entry name" value="zf-Tim10_DDP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144122">
        <property type="entry name" value="Tim10-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="1" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="1" id="KW-0653">Protein transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0811">Translocation</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Tim10-like" evidence="2">
        <location>
            <begin position="13"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="78" mass="9015" checksum="A01ABC431CFA87DB" modified="2014-02-19" version="1">MDLSDLNTAEMQKFYSEEQQRAMVNEMVAKLTSECWDKCITGTPGNKFSSSESNCLSNCAHRYLEMSMLIMKRFQSMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0X9</accession>
    <name>V7B0X9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G033500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0X9"/>
    <dbReference type="SMR" id="V7B0X9"/>
    <dbReference type="STRING" id="3885.V7B0X9"/>
    <dbReference type="Gramene" id="ESW11479">
        <property type="protein sequence ID" value="ESW11479"/>
        <property type="gene ID" value="PHAVU_008G033500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EAFTHYG"/>
    <dbReference type="OrthoDB" id="439808at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd21608">
        <property type="entry name" value="RRM2_NsCP33_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000631">
        <property type="entry name" value="Glycine-rich RNA-binding protein 3, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048289">
        <property type="entry name" value="RRM2_NsCP33-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01228">
        <property type="entry name" value="EGGSHELL"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="40"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="186"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="235" mass="24193" checksum="0F1B62C8840D5B4D" modified="2014-02-19" version="1">MAFLNKIGNLLKSSAVKHMNQDFSVSSPSLFQAIRSMSSAKIFVGGISYSTDDMSLREAFARYGEVLDAKVIMDRETGRSRGFAFITYATSEDATAAVQALDGQDLHGRRIRVNYATERSRPGFGGGGGFGGGGYGGGGYGSSGGDYGRGDSYGSNNRGGSYGSGGYGVTGSYGGGSAETSNYQFGGNSGGDLGSAGVEFGSNQNEGTGAADNEPFEDNVRGNSDETDGYAQTRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2L8</accession>
    <name>V7B2L8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ultraviolet-B-repressible protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G228600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2L8"/>
    <dbReference type="SMR" id="V7B2L8"/>
    <dbReference type="STRING" id="3885.V7B2L8"/>
    <dbReference type="Gramene" id="ESW10671">
        <property type="protein sequence ID" value="ESW10671"/>
        <property type="gene ID" value="PHAVU_009G228600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S31P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VTCASHK"/>
    <dbReference type="OrthoDB" id="539365at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009523">
        <property type="term" value="C:photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.510">
        <property type="entry name" value="Single helix bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009518">
        <property type="entry name" value="PSII_PsbX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34455">
        <property type="entry name" value="OS07G0673550 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34455:SF1">
        <property type="entry name" value="OS07G0673550 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06596">
        <property type="entry name" value="PsbX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="5" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW10671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="120" mass="12259" checksum="78A8A8B3B438C440" modified="2014-02-19" version="1">MASTSALSMAMPVTCASHKKKVVPTSDLFFKPLPLRSSKAVAASNPNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAAVSPSLKNFLLSIGAGGVVVVAIVGAVIGVSNFDPVKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4A0</accession>
    <name>V7B4A0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G050800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 13">Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion intermembrane space</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="13">Binds 1 heme group per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the cytochrome c family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4A0"/>
    <dbReference type="SMR" id="V7B4A0"/>
    <dbReference type="STRING" id="3885.V7B4A0"/>
    <dbReference type="Gramene" id="ESW11683">
        <property type="protein sequence ID" value="ESW11683"/>
        <property type="gene ID" value="PHAVU_008G050800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3453">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPAPYKK"/>
    <dbReference type="OrthoDB" id="449280at2759"/>
    <dbReference type="PhylomeDB" id="V7B4A0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005758">
        <property type="term" value="C:mitochondrial intermembrane space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010336">
        <property type="term" value="P:gibberellic acid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.760.10:FF:000001">
        <property type="entry name" value="Cytochrome c iso-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="entry name" value="Cytochrome c-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="CYTOCHROME C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="Cytochrome c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 11 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 11 13" id="KW-0408">Iron</keyword>
    <keyword evidence="7 11 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 13" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Cytochrome c" evidence="14">
        <location>
            <begin position="10"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW11683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="112" mass="12275" checksum="6EAA35EAC3061F89" modified="2014-02-19" version="1">MASFDEAPPGNSKNGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSSANKNRAVTWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B662</accession>
    <name>V7B662_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G164500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B662"/>
    <dbReference type="STRING" id="3885.V7B662"/>
    <dbReference type="Gramene" id="ESW13060">
        <property type="protein sequence ID" value="ESW13060"/>
        <property type="gene ID" value="PHAVU_008G164500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRENPHI"/>
    <dbReference type="OrthoDB" id="1658010at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000095">
        <property type="entry name" value="protein STRUBBELIG-RECEPTOR FAMILY 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF212">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="30571" checksum="B9734EAE6C7811C0" modified="2014-02-19" version="1">MQAKFLTLVHHRNVVSLVGYCDEEDAKALIYEYLSKGNLQEQFSKAYFVDKSSSVLGWKERVQIALDAASGLDYLHNGCKPPIIHRDLKGSNILVDENMHAKISDFGLSRTFANDSDTHVLTNYPGGTPGYIDPEYHSSGTLNKRSDVYSFGVILLELITGQAAIRGTPEKPSHIHSWVKPKLEAGDIQAMVDPRLEGNYNVASAWKFLDIAMSCLPDVAIQRPDISHITSELKDCLSLELSLQRTVTNNNIHSFLMDSMLIDFNESDIGPYPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7G0</accession>
    <name>V7B7G0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Cucumisin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G228700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7G0"/>
    <dbReference type="STRING" id="3885.V7B7G0"/>
    <dbReference type="Gramene" id="ESW13817">
        <property type="protein sequence ID" value="ESW13817"/>
        <property type="gene ID" value="PHAVU_008G228700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRA7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 9" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754183" description="Cucumisin" evidence="10">
        <location>
            <begin position="22"/>
            <end position="733"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="12">
        <location>
            <begin position="29"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="11">
        <location>
            <begin position="128"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="13">
        <location>
            <begin position="635"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW13817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="733" mass="79565" checksum="123344DF03D415A3" modified="2014-02-19" version="1">MISLRPCLLFILLCIATVKHAHSNNDRKTYIVYMGDHPKDTDLTSIPSLHTTMAQKVLGSDFKTEAVLHSYKNFNAFVMKLTEEEAKRMAEMESVVSVFPNGKNVPRTTRSWNFLGLPQNTNRETTESDIIVGVIDTGIWPESESFSDKGFGPPPTKWKGSCHNFTCNNKIIGAKYFNLKREFAKDDILSPRDGEGHGSHCASTVAGNSVNSVSLFGLASGTARGGVPSARIAVYKVCWKTGNCGDADTLAAFDEAISDGVDVISISTGLGNIVHVPYFQDSNNIGSFHAMKKGILTSNSANNLGPNLYSMTNYAPWLLSVAASTFDRKIVTKVKLGNGAIYEGVSINTFDLKRKLYPLVYGGDIPNTAGGHNSSTSRYCEKDSLDKHSVQGKIVLCESIQGAEDAGFLSGAVGVIFGNNYPKDLPGAYALPALEVTLWDLRLIHSYLTSNRNATATIFKSEEVNDGLIPSIASFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIDPISSVKGDKRKVKYNVISGTSMACPHATATAAYIKSFHPNWSPAMIKSALMTTATPMSRTLNPEAEFAYGAGLINPVKAPNPGLVYDINEADYIKFLCGEGFTDKELRVLTADHSSCKGQANKKAVFELNLPSFSLYVNDSYFSSPYRRTVTNVGSTTSTYKARVIAPSLLNIQVKPNTLSFTSIGQKKSFYVIIQGRINVEILSASLIWDDGNHQVRSPIVVYQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8C1</accession>
    <name>V7B8C1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G251300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8C1"/>
    <dbReference type="SMR" id="V7B8C1"/>
    <dbReference type="STRING" id="3885.V7B8C1"/>
    <dbReference type="Gramene" id="ESW14079">
        <property type="protein sequence ID" value="ESW14079"/>
        <property type="gene ID" value="PHAVU_008G251300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRXJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="5065855at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000006">
        <property type="entry name" value="WRKY transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000001">
        <property type="entry name" value="WRKY transcription factor 33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221:SF1">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 33-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="8">
        <location>
            <begin position="232"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="WRKY" evidence="8">
        <location>
            <begin position="398"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="40"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="175"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="281"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="7">
        <location>
            <begin position="62"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="204"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="313"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW14079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="572" mass="62520" checksum="4C0E0B64DBA258EA" modified="2014-02-19" version="1">MASSTGSLDTSATANSFTNFTFSTHPFMTTSFSDLLLSPTDTKPQGALSERNASGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLSASNILPSPTTGAFVSQNFNWKSSSGGNQQIVKEEDKSFSNFSFQPQPRPPASSTLTYQSSNVAVQNQHPWNFQETTKQDSFSSGKSMMKTENSSSMHSFPPEIASVQTNHSNGFQSDFGNYPPQSQTLSRKSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSSSSLAIPPSNPISTEIQDQSYATHGSGQMDSAATPDNSSISIGDDDFEQSSQKCKSGGDEYDEDEPEAKRWKIEAENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGHSVNRPLLNNAANPTTTATAIRPLAVTHPTDNSVQTQRPQAPPEAQSPFTLEMLQGPGSFGFSGFGNPMGSYMNQQQLSDNVFSSRTKEEPRDDVFLESLLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8X8</accession>
    <name>V7B8X8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G153800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8X8"/>
    <dbReference type="SMR" id="V7B8X8"/>
    <dbReference type="STRING" id="3885.V7B8X8"/>
    <dbReference type="Gramene" id="ESW12931">
        <property type="protein sequence ID" value="ESW12931"/>
        <property type="gene ID" value="PHAVU_008G153800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AQFTKHF"/>
    <dbReference type="OrthoDB" id="1875751at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005654">
        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000051">
        <property type="entry name" value="Heterogeneous nuclear ribonucleoprotein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000469">
        <property type="entry name" value="Heterogeneous nuclear ribonucleoprotein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033">
        <property type="entry name" value="RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033:SF5">
        <property type="entry name" value="RRM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="42"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="5">
        <location>
            <begin position="132"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="206"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW12931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="370" mass="38934" checksum="57E134FC5AC905CD" modified="2014-02-19" version="1">MESPPSNHHAVDGDANDLIPFSHRDDEEDKPQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDIVIEDTHIINGKQVEIKRTIPRGAVGSNSKDFRTKKIFVGGIPSTVSEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLAVGNKIEFSGAQVEIKKAEPKKPNPPAPSSKRYNDARSSYGGGYGDAYDGFGGNFGMGGGYRSGGAYGGRGSAYGGFGSEFGGYGRYAGAMGPYRGDPSLGYAGRYGGGFGRGYDLGGYGGANEGYGAYSGGGGSSGNAYGSSYDASLAGGYGGASGGSFYGTRGGYGGAGTARYHPYGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7B922</accession>
    <name>V7B922_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G189500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B922"/>
    <dbReference type="SMR" id="V7B922"/>
    <dbReference type="Gramene" id="ESW13358">
        <property type="protein sequence ID" value="ESW13358"/>
        <property type="gene ID" value="PHAVU_008G189500g"/>
    </dbReference>
    <dbReference type="OMA" id="MIMVVIM"/>
    <dbReference type="OrthoDB" id="1425770at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="57" mass="6416" checksum="3D74D8E934BEB88B" modified="2014-02-19" version="1">MIMVVVMTEILGKYVTVLTSVTERLLPRHGISFGGLRKNRPFASTTFSDSTSFLVYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9C9</accession>
    <name>V7B9C9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Pectate lyase superfamily protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G199400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9C9"/>
    <dbReference type="SMR" id="V7B9C9"/>
    <dbReference type="STRING" id="3885.V7B9C9"/>
    <dbReference type="Gramene" id="ESW13473">
        <property type="protein sequence ID" value="ESW13473"/>
        <property type="gene ID" value="PHAVU_008G199400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVTN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HINLYKM"/>
    <dbReference type="OrthoDB" id="187139at2759"/>
    <dbReference type="PhylomeDB" id="V7B9C9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051801">
        <property type="entry name" value="GH28_Enzymes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31339">
        <property type="entry name" value="PECTIN LYASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31339:SF60">
        <property type="entry name" value="POLYGALACTURONASE_GLYCOSIDE HYDROLASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754263" description="Pectate lyase superfamily protein domain-containing protein" evidence="7">
        <location>
            <begin position="22"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="442" mass="48034" checksum="BE0B48E5D76A5094" modified="2014-02-19" version="1">MRLRCFTLLCLCCCWFVSGEAETVSCSNIVPLGFRTQNISITEFGGVGDGRTLNTRAFREAIYRVQHLPRVGGTLLYVPPGVYLTEPFNLTSHMTLFLAAGAVIMATQDSSNWPLIAPLPSYGRGRELPGGRYMSFMHGDGVQDVVITGENGTIDGQGDAWWNKWRQGSLQFTRPNLVEFVNSRDIIISNVVFKNSPFWNIHPVYSSNVVVRFVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGLPSSNITIRRVSGSSPFAGIAIGSETSGGVENVLAEHINLYKMGIGIHIKTNSGRGGFIKNITVSHVYMEDARKGIRISGDVGDHPDDKFDPNALPIVKGVTMKNVWGVKVLQAGLIQGVKNSPFSDICLYDINLGGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSNHQGSCANYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9E8</accession>
    <name>V7B9E8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G282900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9E8"/>
    <dbReference type="SMR" id="V7B9E8"/>
    <dbReference type="STRING" id="3885.V7B9E8"/>
    <dbReference type="Gramene" id="ESW14459">
        <property type="protein sequence ID" value="ESW14459"/>
        <property type="gene ID" value="PHAVU_008G282900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0153">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPLRVQW"/>
    <dbReference type="OrthoDB" id="10259600at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000974">
        <property type="term" value="C:Prp19 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071006">
        <property type="term" value="C:U2-type catalytic step 1 spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071007">
        <property type="term" value="C:U2-type catalytic step 2 spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036002">
        <property type="term" value="F:pre-mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017070">
        <property type="term" value="F:U6 snRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd12224">
        <property type="entry name" value="RRM_RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1000.10:FF:000036">
        <property type="entry name" value="Zinc finger CCCH domain-containing protein 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000347">
        <property type="entry name" value="Zinc finger CCCH domain-containing protein 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039171">
        <property type="entry name" value="Cwc2/Slt11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048995">
        <property type="entry name" value="STL11/RBM22-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032297">
        <property type="entry name" value="Torus"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14089:SF6">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR RBM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21369">
        <property type="entry name" value="STL11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16131">
        <property type="entry name" value="Torus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="10">
        <location>
            <begin position="157"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="9">
        <location>
            <begin position="228"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="7">
        <location>
            <begin position="157"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="299"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="334"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="301"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="410"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="8">
        <location>
            <begin position="421"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="451"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="474"/>
            <end position="484"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW14459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="54481" checksum="BFA03E0BA22E832E" modified="2014-02-19" version="1">MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALHIDSNDAIPKSDVNREYFAEEHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMATLEAPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVSYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQTSKPESDGSDQARQQSSVAHSGLLPRAVISQQQNQDQTQGTLFYNNPPPMQQERSYYPSMDPQRMGALISSQDGPPGGPSGSGENKSSLEKQPMQHYARPMMPPPPGQYHHQYYSPYGYMPPVPPYQQYPPPPYNTAAPSQPPAANHPYQHSTQPVSSQTGSVQAAHAPTESGTSTSGSQQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB21</accession>
    <name>V7BB21_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G043300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB21"/>
    <dbReference type="STRING" id="3885.V7BB21"/>
    <dbReference type="Gramene" id="ESW15092">
        <property type="protein sequence ID" value="ESW15092"/>
        <property type="gene ID" value="PHAVU_007G043300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTW4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHDQRKH"/>
    <dbReference type="OrthoDB" id="2019579at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36325">
        <property type="entry name" value="MYOSIN-2 HEAVY CHAIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36325:SF1">
        <property type="entry name" value="MYOSIN-2 HEAVY CHAIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="420"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="420"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="793" mass="89320" checksum="31CCE758C66E3DDC" modified="2014-02-19" version="1">MEVGCNSGSENHSPNASAPPPFHSPTASVNSKIGKNKLSREAGQSTSSALNKFKSQIRKPPRRKTSPINWFPRKKGDTYMNRKIKMLQEVDGINLTLDQTLGSSYPHYSRVLREKIAAREAAHKAMETQRAALVEASWCRILRAAGIPSDDAEARLLKAEKSAEEAFETAQAMGVIMFDLPNCPRKTDTSSVHGEGSYTHAVTASFETAFEVDREVAAAVKTAFIRLANSTSFSKGEFRELLRKISENPDTEESDQDLVEFCSEYEAESGAEFVSASQKSDLNSQELDSKIPFLGKSRWRRQSLENRIKLVGMMIERLKCFQEDELSSLATIVATYGLNASLAEVQNAKLHNPDSSTEYSSSLATNFPARRMSSLGWGKLALDVTRKKQVEPEVPSLDKFLVKHVTKLEREIWEAKQNRKIETEPVRDSSRKSVDETPPEMVPDLGSILVKNYSKLEKDIKEAKIKSGQEMPAVPSGMPNRQKDHIDVPSLDKVLVKHVSRLEKEVQEAKTRRMNENKSLKKKVYLDTSGELDSTLFSDEALDSKENINSNTGFNSGENKDGLEKILVKPVHRLEREKQHALSLGSRENYKQRMNHEATNVQDGESLDKVLVKHVSRLEKEKMRNNLEEEWGQVKRSHRNNHLETNEGGLDQVLVKHKSRLEKEKMVATQQPETSVSHSMTRREARARELQETWGGLSLGNAHLETNEGGLDQVSVKIKSRLEREKMVAAQQPENSVSLSVTRREARERELQEAWGGVSLGNSIKPRVSRLEREKAAWIKAEEEERKQAMKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBZ3</accession>
    <name>V7BBZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">TLC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G243400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBZ3"/>
    <dbReference type="STRING" id="3885.V7BBZ3"/>
    <dbReference type="Gramene" id="ESW13986">
        <property type="protein sequence ID" value="ESW13986"/>
        <property type="gene ID" value="PHAVU_008G243400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4561">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLFYHIW"/>
    <dbReference type="OrthoDB" id="10266980at2759"/>
    <dbReference type="PhylomeDB" id="V7BBZ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055088">
        <property type="term" value="P:lipid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006634">
        <property type="entry name" value="TLC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050846">
        <property type="entry name" value="TLCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13439">
        <property type="entry name" value="CT120 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13439:SF0">
        <property type="entry name" value="TOPOISOMERASE I DAMAGE AFFECTED PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03798">
        <property type="entry name" value="TRAM_LAG1_CLN8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00724">
        <property type="entry name" value="TLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50922">
        <property type="entry name" value="TLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="193"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="TLC" evidence="7">
        <location>
            <begin position="59"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="270" mass="30417" checksum="D002FA474F0F0736" modified="2014-02-19" version="1">MESTSSFGSFSFYEYASPSKVVLWLASIFSGIILCVIAYTSTAILSSLLFKGYGKLSSAEKIEWNNRGFSTFHALFVSSASFYLVILSDVFIAKSHDDIVINKSSRLSDTVLGISIGYFLTDLAMVLWNFPALGGLEYVLHHGLSIGSITLSLISGQVHIYILMVLFSESTTPFVNLRWYLDIAGLKSSKLYIWNGIALFFGWLVARIFLFMFLFYHIWTRLAEVKEVFLFGFYTLIMVPSVLAVLNIFWFWKIAKGMVKTLTKAKHKGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDZ7</accession>
    <name>V7BDZ7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G007900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7BDZ7"/>
    <dbReference type="Gramene" id="ESW14676">
        <property type="protein sequence ID" value="ESW14676"/>
        <property type="gene ID" value="PHAVU_007G007900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW14677">
        <property type="protein sequence ID" value="ESW14677"/>
        <property type="gene ID" value="PHAVU_007G007900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS0K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHRIPSR"/>
    <dbReference type="OrthoDB" id="758862at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34536:SF4">
        <property type="entry name" value="BTZ DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34536">
        <property type="entry name" value="DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="489"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="604"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="868"/>
            <end position="913"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="933"/>
            <end position="966"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1036"/>
            <end position="1071"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1104"/>
            <end position="1182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1200"/>
            <end position="1225"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1262"/>
            <end position="1290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1320"/>
            <end position="1387"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="33"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="111"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="510"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="869"/>
            <end position="883"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="894"/>
            <end position="913"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="933"/>
            <end position="954"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="957"/>
            <end position="966"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1127"/>
            <end position="1141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1210"/>
            <end position="1223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1270"/>
            <end position="1281"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1320"/>
            <end position="1334"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1348"/>
            <end position="1358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="1359"/>
            <end position="1369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1387" mass="152949" checksum="5A5E612498CEB2E5" modified="2014-02-19" version="1">MPVSGHEETGVKSYAGQFSGLIAGVPIKKRRFPSFQPSSSPVSEEPCSLSEETELQRKENSSTSQGSTLTNASIAGAPIKKRRFPFIQPSSSSFEASRSEESDALRKEHSSTSPGSTLSTSSSSLSDANGIPALEDKKASTDVTNVNTGQSNSCFLIPKLEEPNLRTQSCTLDVMDSKEKVILDEDSNKKLEHQIIKGNPELLLAAKEGLALSIGAEVSKQNVKDICRKESPLVSGSTSLSLSLEEHHFQAVESMENEKNRLKIEKAESVSLELSLSKEDCSSHSLNTDAKTDRDKTPVHSNRANWDLNTTMDAWEESGTEAGLVKTCVDGLKITENSVVEKQLMTRPTNLLSVKPMCEERQKKDFTFSSGLCGPEFRFVDSSNLSLSPFLQKFTEEPSKLSVKLNSGSSITNVSLSSVASIAGDANSSSFRLVKPEPFDENLKKDLKEANTSTSGSLDSVTVKQEHFQPLVVKSSKMSNVSNLMKADAVSVKQEQDHTGNQERSSAAESKTEQLDKEELQQGLDDSSPSLAMSVFPETTHISAEAPCPPVKPVCTAELSASENIVSQIENSSTTDGDNVEKVCQGACLNAEQVTIETVAMPVDDNGSELKNPGPKISSVSTEEKNAADRDACRLKLMNEPLAASRGSGEGCASDEEKITLSGDMLEDDSYGSDYESDENHAVTIAVDTERYVEDDDYEDGEVREPLDPSIAEDTICEVREVEHPDCSNFVNKQMEKGMVSGDCTAPYQVVESDKKTAIQSEINSEDGMDIEMHERSGKVVDKNVCLQESLDDEKSNIAAHGNKPVNVLQMKALDLLEGKNVSEALVTESLSNQATDGSNAVDVHCADEVVKTTDTIKQTDLELPNMEVSGNANDASKDVNNGGNPGRIIDLSRATSSSSPGKTRSISGRSQLSTRAGRDVLFDTLDGDKIHRGRDDVYIDGPHKFSRERHQDMSPRNSRLNFGRGRGRLNSRLDSVRNEWESDREFSGEFYNGPNQFRGPRPKYASAFANTDLEYNNVAPDGSYVGNGRLGRKPLSDGSYIAPRRRSPGGRDGIQIGHRNPRNISPNRCIGDGSDMVGVRHNDKFLRGLPEDNMDAMFTRPQTFEGMDGRFTRGGSRNFPSMPRRGLPRIRSKSPIRSRSRSPGPWSSPRRRSPRRRSPDGFGGHPELTHRRSPFYRVDRMRSPDRPVFPAERVVRRHGSPSFMSRPSNDMRDIDSARDHGHPRSGRILIRNRRFDVVDPRDRADNDDDYFGAPMHSGRLLELSGEGNGDERRRFGERRGPVRSFRPPYNNNVGENFHLNAEDGPRHYRFCSDDSDFHERGGNNIRERDFDRRIKGRPGNVPPRRTRNMDEQEENFRHGGGGGGGGGQVWSDDSFDDISRVKRKRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEW6</accession>
    <name>V7BEW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY</fullName>
            <ecNumber evidence="4">2.4.1.255</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G153100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase 41 family. O-GlcNAc transferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.255" evidence="4"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEW6"/>
    <dbReference type="SMR" id="V7BEW6"/>
    <dbReference type="STRING" id="3885.V7BEW6"/>
    <dbReference type="Gramene" id="ESW16394">
        <property type="protein sequence ID" value="ESW16394"/>
        <property type="gene ID" value="PHAVU_007G153100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16395">
        <property type="protein sequence ID" value="ESW16395"/>
        <property type="gene ID" value="PHAVU_007G153100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CALTYCG"/>
    <dbReference type="OrthoDB" id="9991317at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097363">
        <property type="term" value="F:protein O-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009740">
        <property type="term" value="P:gibberellic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001620">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051939">
        <property type="entry name" value="Glycosyltr_41/O-GlcNAc_trsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029489">
        <property type="entry name" value="OGT/SEC/SPY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44835:SF1">
        <property type="entry name" value="PROTEIN O-GLCNAC TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44835">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13844">
        <property type="entry name" value="Glyco_transf_41"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13374">
        <property type="entry name" value="TPR_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13432">
        <property type="entry name" value="TPR_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50293">
        <property type="entry name" value="TPR_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0939">Gibberellin signaling pathway</keyword>
    <keyword evidence="6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="9 12" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="81"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="115"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="156"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="190"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="224"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="299"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="333"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="367"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="12">
        <location>
            <begin position="401"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="14">
        <location>
            <begin position="480"/>
            <end position="637"/>
        </location>
    </feature>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="14">
        <location>
            <begin position="654"/>
            <end position="834"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="866"/>
            <end position="929"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="866"/>
            <end position="888"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="915"/>
            <end position="929"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF13844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW16394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="929" mass="103466" checksum="28AA1F14802DB447" modified="2014-02-19" version="1">MAWVEDKDGDNGRENKLVGENGFLKVTERSSDGSVGDVGSVSKRCEGKGDVSYANILRSRNKFEDALALYERVLVDDGGNVEALIGKGICLQMQNVGRLAFESFNEAIRLDPQNACALTHCGILYKDEGRLMEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPHYAPAYYNLGVVYSEMMQYDMALNFYEKAALERPMYAEAYCNMGVIYKNRGDLEAAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALGIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGDISLAINAYEQCLKIDPDSRNAGQNRLLAMNYIDEGNDDKLFEAHRDWGRRFMRLYSQFTSWDNSKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYTNYKVIVYSAVVKADAKTSRFREKVVKKGGLWRDIYGTEEKKVADMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSQADPPETKQKHVEELVRLPDCFLCYTPSPEAGPICPTPALSNGFVTFGSFNNLAKITPKVLRVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSRLENLGLEALRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLSKVGLGHLIAKNEDEYEKLALKLASDVSALQKLRMSLRELMSKSPLCDGAKFIRGLESTYRQMWRRYCKGDVPALKCMELLQQHVSTSDPTNNNGESTRNVNLSEGSPGSVMANGFSLTQPLKPNVHSCEENGGSLNHNSKQGMVGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG65</accession>
    <name>V7BG65_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G075200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG65"/>
    <dbReference type="STRING" id="3885.V7BG65"/>
    <dbReference type="Gramene" id="ESW15471">
        <property type="protein sequence ID" value="ESW15471"/>
        <property type="gene ID" value="PHAVU_007G075200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RNGK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVIFRSH"/>
    <dbReference type="OrthoDB" id="1406886at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025322">
        <property type="entry name" value="PADRE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33148:SF69">
        <property type="entry name" value="DUF4228 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33148">
        <property type="entry name" value="PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14009">
        <property type="entry name" value="PADRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW15471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="299" mass="32802" checksum="7AC99065426814AC" modified="2014-02-19" version="1" fragment="single">SRVTWAAQDKWQIKKIKDKSTQNKVNMASIRGGALHSTEFPPYITKEHHQYLLLYYHIGFKSNMGNCFFGAMSDPGAAIKVITSNGGIMEFTAPVTVSFITNEFPGHAIFRSHDLFWKPLSQFEELEAGQSYYLLPLTNNTNSSNNSNIDTPSGVGDNVNVVRQGHVRSNSLPTTSYPALYRMSLDYQHHHQGMGLLKRSSNEPFSSRSSSNNSSCNIGGLGGSSRFWKVKLVITPEQLLDILAQEARTKELIESVRMVAKCGVGGGISSSAAGMISDQWSLSSTSWSISSKIDALVGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHM9</accession>
    <name>V7BHM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">holo-[acyl-carrier-protein] synthase</fullName>
            <ecNumber evidence="1">2.7.8.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G152100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.8.7" evidence="1"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHM9"/>
    <dbReference type="SMR" id="V7BHM9"/>
    <dbReference type="STRING" id="3885.V7BHM9"/>
    <dbReference type="Gramene" id="ESW16383">
        <property type="protein sequence ID" value="ESW16383"/>
        <property type="gene ID" value="PHAVU_007G152100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0945">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="26719at2759"/>
    <dbReference type="PhylomeDB" id="V7BHM9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019878">
        <property type="term" value="P:lysine biosynthetic process via aminoadipic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.470.20:FF:000010">
        <property type="entry name" value="L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.470.20:FF:000011">
        <property type="entry name" value="Os08g0243100 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="entry name" value="4'-phosphopantetheinyl transferase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055066">
        <property type="entry name" value="AASDHPPT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050559">
        <property type="entry name" value="P-Pant_transferase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12215:SF15">
        <property type="entry name" value="4'-PHOSPHOPANTETHEINYL TRANSFERASE SUPERFAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12215">
        <property type="entry name" value="PHOSPHOPANTETHEINE TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22624">
        <property type="entry name" value="AASDHPPT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="4'-phosphopantetheinyl transferase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="4'-phosphopantetheinyl transferase N-terminal" evidence="4">
        <location>
            <begin position="70"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="4'-phosphopantetheinyl transferase" evidence="3">
        <location>
            <begin position="166"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF22624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW16383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="343" mass="38337" checksum="5DC7F64E7C6DFAAE" modified="2014-02-19" version="1">MVNRGTLGPLSVCMTSLRHKALLLMNIYCLGRNLTTASSSSLLPVKLPAQREVHFWYVLPDEVKSTNLLNRYLEILSPCEKESILTMREEQIKKRALLARALVRTTLARYHTNCQIDPKSLKFRKNNYGKPELDLQYADDWSLPPLHFNISHTSSLIACGVTVGSAIGIDVEEKQRRLKNDTLAFAQRFFSPCEIEMLTHIVDPELRLQEFIKLWTLKEAYVKALGKGFSASPFKTFTVRLGDHVKGNIHAPPHMISKAHDITVESSDDLQNPSSNWQFGLLELAGSHYAAVCIEQDSIDAGNGSIPIDLTLRKTIPYVEDECISATDSAVVIGGLTRLSVCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BI40</accession>
    <name>V7BI40_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G2478000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CND1 (condensin subunit 1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BI40"/>
    <dbReference type="STRING" id="3885.V7BI40"/>
    <dbReference type="Gramene" id="ESW17542">
        <property type="protein sequence ID" value="ESW17542"/>
        <property type="gene ID" value="PHAVU_007G2478000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0414">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVIAKLW"/>
    <dbReference type="OrthoDB" id="436262at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000779">
        <property type="term" value="C:condensed chromosome, centromeric region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000796">
        <property type="term" value="C:condensin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010032">
        <property type="term" value="P:meiotic chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007076">
        <property type="term" value="P:mitotic chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000378">
        <property type="entry name" value="Condensin complex subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000403">
        <property type="entry name" value="Condensin complex subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026971">
        <property type="entry name" value="CND1/NCAPD3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032682">
        <property type="entry name" value="Cnd1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007673">
        <property type="entry name" value="Condensin_cplx_su1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024324">
        <property type="entry name" value="Condensin_cplx_su1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222">
        <property type="entry name" value="CONDENSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14222:SF2">
        <property type="entry name" value="CONDENSIN COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12717">
        <property type="entry name" value="Cnd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12922">
        <property type="entry name" value="Cnd1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017127">
        <property type="entry name" value="Condensin_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7" id="KW-0226">DNA condensation</keyword>
    <keyword evidence="6" id="KW-0498">Mitosis</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Condensin complex subunit 1 N-terminal" evidence="12">
        <location>
            <begin position="7"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Condensin complex subunit 1 C-terminal" evidence="11">
        <location>
            <begin position="832"/>
            <end position="992"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="319"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1110"/>
            <end position="1184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="341"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="1119"/>
            <end position="1129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF12922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW17542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1184" mass="130867" checksum="20F746F6D5F1E1CD" modified="2014-02-19" version="1" fragment="single">VVAPSARKKLAVNSWNWEAQRARILNLIANSLEINLELLFSSPDLNENYLSFITKNAFSMFEDAVLLKDSDVKEALCRIIGACSTKYHYTAQSCASIVHLIHKYDFVVTHMADAVAGAEKKYGDGSLAMALVREIGRTNPKDYVKDTAGAENVGRFLVELADRIPKLISTNIGILVPHFGGESYKIRNALVAVLGKLIAKAFKDVDVGEASSKSIRLRTKQAMLDILLERCRDVSAYTRSRVLQVWAELCEGHSISIGLWNEVAEVAAGRLEDKSAMVRKSALNLLIMMLQHNPFGPQLRVASFEATLDQYKMKLKELEPSEGAEPSSDTDNFNGDGEVVDSNSETVVKGQQQDSLTDSCLSQSEDAIALQNSSVPDVGNLEQTRALIASLEAGLRFSKCIGATMPTLVQLMASSSATDVENTILLLMRCKQFQIDNSEECLRKMLPLVFSQDKSIYEAVEGAFHIIYIRKSPIETANNLLSLATDSNIGDLAALECIIGALVSKGDISSSTISALWDIFCFNIGGTTAEQSRSALSVLCMVAKTSPGVLGSHLQDIIDIGFGRWSKVDPLLARTACLAIQRLSEEDKKKLLASSSVRIFGILESLITGFWLPTNIWFCAADKAIAAIYAIHPTPETIAVDMIKKSVSSVGNDGADNEQSDFDTISGSTPLTVQVAKLSRCLFIVSHIAMNQLVYIESCARKIQKQKLTKEKKDSENQNLDSNDTVSAATQKDNDINAELGFTASEDAALDALFEKAEKEIISGGSNEKNLIGACATFLSKLCRNFGLMQKYPELQASAMLALCRLMIIDADFCDANLQLLFTVVESSHSETVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPCISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFHELSKKGNNPIYNLLPDILSKLSQQNLSKDSFCNIMQFLIASIKKDRQMEALVEKLCHRFSGVTDVRQWEYISYCLSQLSFTEKGMKKLIELFKSYEHVLSEDSVMDHFRNILNKAKKFAKVELKACLEEFEDKLNKFHTDRKEQEVTARNAQIHQQKIDSMEGFTVATNSVDHSESNSASDDTEGEVIDDCAEEATLPSNGKSESKLVPEDHSGASSELTESDRGDIEIQSSQVKTRGVHRSKTSKSSVKDEKGHSISVTRRNTRSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ88</accession>
    <name>V7BJ88_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G171400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ88"/>
    <dbReference type="STRING" id="3885.V7BJ88"/>
    <dbReference type="Gramene" id="ESW16621">
        <property type="protein sequence ID" value="ESW16621"/>
        <property type="gene ID" value="PHAVU_007G171400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQU7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSCLWSE"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080090">
        <property type="term" value="P:regulation of primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46266">
        <property type="entry name" value="TRANSCRIPTION FACTOR TT8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46266:SF4">
        <property type="entry name" value="TRANSCRIPTION FACTOR TT8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="112"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="173"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="173"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="188"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW16621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="316" mass="35599" checksum="72C43E340AF8182C" modified="2014-02-19" version="1">MYFAAPHLLEDLTQEDNHYSETVSNILQNQSSRWPTSPTSVGYITYSPHSAFAKWSSRASHLFQPAVDGPSQWLLKYILFTVPYLHAKNPADTSPQTAADPKLRGKGTPQDELSANHVLAERRRREKLNERFVILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNRHTEAEHRSKLPEVTVQRTSSNSSKEQQRSGVTVMEKRKVRIVEGVAAKATAVEAEAATSVQVSIIESDALLEIECLHREGLLLDVMQMLREVRIEVIGVQSSLNNGVFMAELRAKVKEHANGKKVSIVEVKKALNRIIPHAVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKG2</accession>
    <name>V7BKG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G206600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Secreted</location>
            <location evidence="1 13">Extracellular space</location>
            <location evidence="1 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKG2"/>
    <dbReference type="SMR" id="V7BKG2"/>
    <dbReference type="STRING" id="3885.V7BKG2"/>
    <dbReference type="Gramene" id="ESW17056">
        <property type="protein sequence ID" value="ESW17056"/>
        <property type="gene ID" value="PHAVU_007G206600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ4A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQKNNAN"/>
    <dbReference type="OrthoDB" id="1921208at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010497">
        <property type="term" value="P:plasmodesmata-mediated intercellular transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000280">
        <property type="term" value="P:regulation of root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02241">
        <property type="entry name" value="cupin_OxOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000025">
        <property type="entry name" value="germin-like protein subfamily 2 member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019780">
        <property type="entry name" value="Germin_Mn-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00725">
        <property type="entry name" value="GERMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="7 12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 10 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019619757" description="Germin-like protein" evidence="13">
        <location>
            <begin position="28"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="14">
        <location>
            <begin position="64"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="12">
        <location>
            <begin position="36"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="223" mass="23695" checksum="2F3175C0F891E2C0" modified="2014-02-19" version="1">MVNHTMKLPNFVLLLTSALLLATTVSSDPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BM28</accession>
    <name>V7BM28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Arabinogalactan peptide 23-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G255800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BM28"/>
    <dbReference type="Gramene" id="ESW17631">
        <property type="protein sequence ID" value="ESW17631"/>
        <property type="gene ID" value="PHAVU_007G255800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S74N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAYYLHC"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044702">
        <property type="entry name" value="AGP23/40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34672:SF2">
        <property type="entry name" value="ARABINOGALACTAN PROTEIN 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34672">
        <property type="entry name" value="POLLEN-SPECIFIC ARABINOGALACTA PROTEIN BAN102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754709" description="Arabinogalactan peptide 23-like" evidence="2">
        <location>
            <begin position="23"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="58" mass="5647" checksum="6829840DEDE19121" modified="2014-02-19" version="1">MDMRKVSCVVLIVAASMSAALADAEVPAPAPGPSSGASATVVGSLVGASVMSLFALFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMM5</accession>
    <name>V7BMM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CYRIA/CYRIB Rac1 binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G107600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMM5"/>
    <dbReference type="STRING" id="3885.V7BMM5"/>
    <dbReference type="Gramene" id="ESW19234">
        <property type="protein sequence ID" value="ESW19234"/>
        <property type="gene ID" value="PHAVU_006G107600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3534">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DQPNRVE"/>
    <dbReference type="OrthoDB" id="10265867at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030833">
        <property type="term" value="P:regulation of actin filament polymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008081">
        <property type="entry name" value="Cytoplasmic_FMR1-int"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12195">
        <property type="entry name" value="CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05994">
        <property type="entry name" value="FragX_IP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF008153">
        <property type="entry name" value="FMR1_interacting"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01698">
        <property type="entry name" value="CYTOFMRPINTP"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1130" mass="129000" checksum="AA05BD8583BC3938" modified="2014-02-19" version="1">MYQPSSGGERERFIFPVFFFFYSWRSGFLQELTQQLMMAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKALNQLSVLSQEGKEMTSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLMNIFKNEAVIPAFPDLHLSPAAILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGAIRAEHDDFVIRFASAMNQLLLLKSTDGSDVEWSKEVKGNMYDMIVEGFQLLSKWTARIWEQCAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTVVADALWETIHAEVQDFVQNTLAIMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQHGGEESKANIFYPRAVAPTTAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQLETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVECVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAASELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERINKVFRENIEFLFDRFECQDLCAIVELEKLLEVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSAKPSFYCGTQDLNSAHQSFARLHSGFFGIPHTFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESLPKSIGLLPFDGGVTGCVRLVKEHLNWGTKSELKAEVLHGIKEIGSVLYWMGLLDIVLREKDSMDFMQTAPWLGLLPGGDGQIVTSQDGEHSPVVSLFKSTAAAMISYPGCPSPTSFHIMSKQAEAAACHVSLYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN27</accession>
    <name>V7BN27_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G117400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN27"/>
    <dbReference type="SMR" id="V7BN27"/>
    <dbReference type="STRING" id="3885.V7BN27"/>
    <dbReference type="Gramene" id="ESW19352">
        <property type="protein sequence ID" value="ESW19352"/>
        <property type="gene ID" value="PHAVU_006G117400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0428">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EENIFDW"/>
    <dbReference type="OrthoDB" id="1158011at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="CDD" id="cd23799">
        <property type="entry name" value="UBCc_UBE2J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.110.10:FF:000056">
        <property type="entry name" value="ubiquitin-conjugating enzyme E2 32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050113">
        <property type="entry name" value="Ub_conjugating_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24067">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="275"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="UBC core" evidence="3">
        <location>
            <begin position="10"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="171"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="232"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="239"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW19352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="34628" checksum="B9B43B88DF99ADCD" modified="2014-02-19" version="1">MADKYNLKNPAVKRILQEVKEMHSNPSDDFMSLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAVKSREAPPKFGTPERQKLIDEIHEYMLSKAPPVPQPSATEASEEHPRNEEAEALVDSPNRESLPAGERIPDQEGDGILEEQEVLANPNPAGVEVSGEIQSNVSRNELPQKSDTTARVHNTKPETRVQKPDDRLFTLAAIGLVIAIVVLLLKKFIKSTEHGALFSNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN54</accession>
    <name>V7BN54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cellulase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G0049000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN54"/>
    <dbReference type="STRING" id="3885.V7BN54"/>
    <dbReference type="Gramene" id="ESW18001">
        <property type="protein sequence ID" value="ESW18001"/>
        <property type="gene ID" value="PHAVU_006G0049000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSIM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIVMSHK"/>
    <dbReference type="OrthoDB" id="1433321at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="123" mass="14316" checksum="4BCAD3D7CF454D35" modified="2014-02-19" version="1" fragment="single">MHSRNDWGGSFEMSNSGEEVYKEKNEWDRAALLERQDLDETLQSWVLERVEKRKKKKYVDFGCIVMSHKALKWIFGSIFIAFLLIALPIIITKSLPNHHSPPTPPDNYTLALHKALLFFNAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQH2</accession>
    <name>V7BQH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH:ubiquinone reductase (non-electrogenic)</fullName>
            <ecNumber evidence="5">1.6.5.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_006G192400g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>a ubiquinone + NADH + H(+) = a ubiquinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:23152"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Intermembrane side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.9" evidence="5"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQH2"/>
    <dbReference type="SMR" id="V7BQH2"/>
    <dbReference type="STRING" id="3885.V7BQH2"/>
    <dbReference type="Gramene" id="ESW20242">
        <property type="protein sequence ID" value="ESW20242"/>
        <property type="gene ID" value="PHAVU_006G192400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPIREIN"/>
    <dbReference type="OrthoDB" id="3244603at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) (non-electrogenic) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000002">
        <property type="entry name" value="External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000008">
        <property type="entry name" value="External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054585">
        <property type="entry name" value="NDH2-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="NADH DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706:SF22">
        <property type="entry name" value="NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00036">
        <property type="entry name" value="EF-hand_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22366">
        <property type="entry name" value="NDH2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0521">NADP</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="EF-hand" evidence="20">
        <location>
            <begin position="375"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00049010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW20242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="577" mass="64873" checksum="85149A547B3B1C53" modified="2014-02-19" version="1">MSSVTFLQRLSGAFRENQSHFKLVLLCTAVSGGGLLAYGESVAPEEAITEKKKVVVLGTGWASTSFLKNLNNPKYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIFKKKKVDVQFSEAECFKIDAENRKVYCRSSLNNNLNGQEEFVVDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAADHILGMFDKRITVFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGETKTIPYGMAVWSTGIGTRPFIKDFMTQIGQASRRAVATDEWLRVEGCNNVYALGDCATINQRKVTEDIAAIFKKADKNNSGTLTVKEFQEVMKDISERYPQVELYLKNKQMRNIADLLKEAKGDDKKESIELNIEELKTALSNVDSQMKFLPATAQVASQQGTYLATCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTKALVVSDWTRRFIFGRDSSSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR84</accession>
    <name>V7BR84_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3-ketoacyl-CoA synthase</fullName>
            <ecNumber evidence="6">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G215000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>a very-long-chain acyl-CoA + malonyl-CoA + H(+) = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:32727"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:90725"/>
            <dbReference type="ChEBI" id="CHEBI:90736"/>
            <dbReference type="EC" id="2.3.1.199"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR84"/>
    <dbReference type="SMR" id="V7BR84"/>
    <dbReference type="STRING" id="3885.V7BR84"/>
    <dbReference type="Gramene" id="ESW20507">
        <property type="protein sequence ID" value="ESW20507"/>
        <property type="gene ID" value="PHAVU_006G215000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQXN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YAWSVIC"/>
    <dbReference type="OrthoDB" id="329835at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0160062">
        <property type="term" value="P:cutin-based cuticle development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000038">
        <property type="term" value="P:very long-chain fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036417">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="22"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="FAE" evidence="8">
        <location>
            <begin position="43"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="9">
        <location>
            <begin position="348"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR036417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW20507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="457" mass="51579" checksum="9E435F14995A11B7" modified="2014-02-19" version="1">MLKFKLMTMEVLLSIYPSFCDLSLISATQSLAAIALILIFLYFCFRRRTVYLLDYVCYMPPDHLRIPYSHMIEHFEICNFDQEKIDFEMKVLERSGIGVEACMPESVHELPPNDSMKLAQEEVELVLFRIVKDLLSKHKVNPKRIDILVSNCSLFCPTPSIASMIINKFGFRSNIKSVNLSGMGCSAGLLSINLAKDLLKVHNNSLALVLSMEAVAPNGYRGNDKSMLIANVLFRMGGAAILLSSRKQDKSVAKYKLQHLVRTHRGSNDQAYKSVYQESDENEIVGVSLSRSLLTVAASALRTNITTLGPLVLPYSEQLRFGWSVICKKIWARGSKEIYVPNFKKAFEHFCIHAGGKSVIDAIEESLKLQKKDSEASRMTLYRFGNTSSSSLWYELCYLEAQGRVKKGDRVWQIAFGSGFKCNSAVWKCLSDTDPSVRNAWSDRIHLYPVEIPVFDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTQ7</accession>
    <name>V7BTQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G062600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTQ7"/>
    <dbReference type="SMR" id="V7BTQ7"/>
    <dbReference type="STRING" id="3885.V7BTQ7"/>
    <dbReference type="Gramene" id="ESW21339">
        <property type="protein sequence ID" value="ESW21339"/>
        <property type="gene ID" value="PHAVU_005G062600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1012">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWPYIGR"/>
    <dbReference type="OrthoDB" id="270970at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00030">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21669">
        <property type="entry name" value="SMP_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052847">
        <property type="entry name" value="Ext_Synaptotagmin/KAHRP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031468">
        <property type="entry name" value="SMP_LBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47042">
        <property type="entry name" value="C2 DOMAIN-CONTAINING PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47042:SF4">
        <property type="entry name" value="OS02G0313700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25669">
        <property type="entry name" value="SMP_MUG190-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51847">
        <property type="entry name" value="SMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="4" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="SMP-LTD" evidence="9">
        <location>
            <begin position="71"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="8">
        <location>
            <begin position="269"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="408"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="475"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="584"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="621"/>
            <end position="728"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="423"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="475"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="499"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="527"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="592"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="660"/>
            <end position="685"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="699"/>
            <end position="718"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="745" mass="84477" checksum="7C547CD26D0A912E" modified="2014-02-19" version="1">MDMTEVSILHHVGIVLIAIWILSAFNWCHSVVYFVALIYLFLVHERYVTRLRKKLQFEERKQANQRRVLSDSETVRWLNHAVEKIWPICMEQIASQKILFPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPFFTEIRVLRQTEDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHIKGMHIEGKILVGVKFLPTWPFLGRLRVCFVEPPYFQMTVKPMFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVNVEKFVSSEQECWFSVDEKEPIAYARVEVIEASEMKPSDLNGLADPYVKGHIGGYRFRTKVQRKTLSPKWHEEFKIPIITWESDNLLVIAVRDKDHFYDDILGDCFVNINEFRDGQRYDMWLQLQNMKMGRLRLAITILEANGKGVDTTSEQEKMDFKVPKNSSAANNTTDNSSFSPVPPEKSQKLADNYEPIDIEGQKKTGIWVHHPGSEVFQRWEPRKGKSRRMDTEIHGEPNDLVGSGSSTVSGSLNNDSSSSDNNNPEEKHRMRSVRRGLHKIGSVFHRSKRGESVGEDIPSPHDNIRSMNSKGMIGVQFVMDENISDFPTPKAQVEGGSNEGSGPESPAKGHVKDMAKHILKHAEKSARGLRHVLSCKSRKSKDESLAVPERVNESGSSDDESNAVQSPTVATTPVGSQASAPGSNDSPLSRVPVVQTVPSNTHEDNEAPREIVNVKDEPEKACYPQRSSEEFVKSDELEHVKEEIVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVI1</accession>
    <name>V7BVI1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G119400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVI1"/>
    <dbReference type="SMR" id="V7BVI1"/>
    <dbReference type="STRING" id="3885.V7BVI1"/>
    <dbReference type="Gramene" id="ESW22017">
        <property type="protein sequence ID" value="ESW22017"/>
        <property type="gene ID" value="PHAVU_005G119400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSGF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMESQIN"/>
    <dbReference type="OrthoDB" id="1883654at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18915">
        <property type="entry name" value="bHLH_AtLHW_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043561">
        <property type="entry name" value="LHW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025610">
        <property type="entry name" value="MYC/MYB_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196:SF11">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14215">
        <property type="entry name" value="bHLH-MYC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23176">
        <property type="entry name" value="bHLH_LHW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="745"/>
            <end position="794"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="215"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="438"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="717"/>
            <end position="760"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="438"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="717"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="746"/>
            <end position="760"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="956" mass="104132" checksum="96F8B859390DF8B9" modified="2014-02-19" version="1">MGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPPMFGIGDLPYHNGGGHWFSSGSQSSQLGIQEEDRVNSLIKKMTVNNSVIIAGEGMIGRAAFTGNHQWILLNSFTKDVNPPELYPEVHHQFSAGIQTVAVIPVLPHGVVQLGSFLPINENMGFVNDVKSLILQLGWVPGALLSEDYSENPSIERLAGPSITGVPLSIDPPAVASNGTPSVTDVSNQKSNPSHTSRRIVHTPCPLNAETNTYQGSARTPETCKLNRISSNHCQPKVIPMSKANFSGQQESRAMEAEVITSDVDSCLQQHSVSYNARSAFDNLTTSGSFGQSCLSDDHLTLMEQQIISAIGNRDNVNPFFNVSGTLNMPHPNTDRGHILGHSMSSSSAPLQGGIPIHGGMSTLLRSNLITSPGSKSPKASTGDLSGVEVGIGLQNSDSSTKARGCSSKNSTSQSGTFPMHVEGSNQNMLPVDFKCVSTNQKIDYDLLQAPNLPTFHVEKRLPISGQIPGFAHDCLSKEGSIQSMMAMNPKLKLDCTKPPSGDDDLFDVLGVDMKNKLLNGNWNKLFTDELDANTENMDKKLDPMNMLDTTTNPDIYSVKEAIDSGIFSGTGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPACRPVMSGHFQGGIFDFPKNGGKTGVTEASIRSRCNKEDAGNCSQTSSAYGSQLSSWVENSGSVKRENSVSTGYSKQPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEEQGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGKASSSNAIDNMVYHTFPQTAQIPATGRPSGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY68</accession>
    <name>V7BY68_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cellulose synthase-like protein H1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G116700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY68"/>
    <dbReference type="SMR" id="V7BY68"/>
    <dbReference type="STRING" id="3885.V7BY68"/>
    <dbReference type="Gramene" id="ESW21985">
        <property type="protein sequence ID" value="ESW21985"/>
        <property type="gene ID" value="PHAVU_005G116700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTT0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FCSAYVV"/>
    <dbReference type="OrthoDB" id="72851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000145">
        <property type="entry name" value="Cellulose synthase-like protein H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="664"/>
            <end position="687"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="693"/>
            <end position="711"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="723"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="466"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW21985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="750" mass="85099" checksum="589952A895D4A280" modified="2014-02-19" version="1">MANQNTLPLYQKVWLKHTFSRAVDSLIFFLLLMLLGYRVFSYHHYSFPWFVAFLCESWFTITWITTISTKWTPAQTITHLNHLLQRVGELPQVDVFVTTADPVLEPPIITVNTVLSLLALDYPANKLACYVSDDGCSPLIYHALVEATKFAKLWVPFCKKYNVQVRAPFRYFSEEATVEKSDFPEFQQEWLKMKEEYEELSCKIQNASQELNACPLVGEYEVFSKTQMRDHPSIIKVLWENKEGLSDGVPNIIYISREKRPQHPHHYKAGAMNVLTRISGLMTNAPYILNVDCDMYVNNPKIAQHALCILLDPKGEKEVAFVQCPQRFYDTVKDDAYGNQLVALPMYIGGGFAGLQGIIYAGTNCFHRRKVLYGLSPDHDIQTAKKDFGFIDGTLSEKKTVQIFGASKGFVESANHALEEMAFTPNHNLFKSLDREAANQISTCDYENSTEWGKQVGWLYGSTSEDVLTGLLMHRKGWRSEVCSPDPMAFMGCSPQDNLGQMAQHKRWSSGLFDIFLSSHCPIFGTLFGKLQFRECLAYIWLTNWALRSVPEISYALLPAYCIITNSSFLPNKELGMWFPVSVFVVYNVGTLSEHLMSGLSARTWWNNQRMGRITTMTSCFLGFLDILLKRLRISDTVFEITKKDQPSSNNENVGRFIFNKSPIFVPGTTILLIQLTALVTALWGWQQLKNDGAYGLGEVFCSAYVVLCYLPLLKGLFGIGKYGIPLSTISKATVLAFFFVQLCRSTITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYG0</accession>
    <name>V7BYG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">AT-hook motif nuclear-localized protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G127900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The PPC domain mediates interactions between AHL proteins.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYG0"/>
    <dbReference type="SMR" id="V7BYG0"/>
    <dbReference type="STRING" id="3885.V7BYG0"/>
    <dbReference type="Gramene" id="ESW22108">
        <property type="protein sequence ID" value="ESW22108"/>
        <property type="gene ID" value="PHAVU_005G127900g"/>
    </dbReference>
    <dbReference type="OMA" id="SECDITP"/>
    <dbReference type="OrthoDB" id="1588495at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003680">
        <property type="term" value="F:minor groove of adenine-thymine-rich DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11378">
        <property type="entry name" value="DUF296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.80">
        <property type="entry name" value="Hypothetical protein, similar to alpha- acetolactate decarboxylase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039605">
        <property type="entry name" value="AHL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005175">
        <property type="entry name" value="PPC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31500:SF45">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31500">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03479">
        <property type="entry name" value="PCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117856">
        <property type="entry name" value="AF0104/ALDC/Ptd012-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51742">
        <property type="entry name" value="PPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PPC" evidence="7">
        <location>
            <begin position="26"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="189"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="313"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="197"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="315"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="341"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="386"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="422" mass="45128" checksum="9D713A169FDCB153" modified="2014-02-19" version="1">MAERDHSKNKNPVLGPDEREKKRETGTSFVPHQIRVNVGEDVVEKVTKLAKTCSQTVCVLSAVGSISSAVFSKPGLPSTDTVKWEGRFEIMSLSGKYTFIPGEDDAHRVHNWWTLSLCGSNGVVFGGSVVGPIIAASHVDVFLASFKLKSVEKMRRRAAEALATASAATAEDSSLKETDAETVCDKYPMVDGKQSRDSPTSGVSPATGIASESVTLQTTGQVSNSVTPITADKTSESLTPKTADKTSESLTPKTTDKTSESFTPKAADKTSESFTLKTADKTSESIPSTMGVYTAGSSSVAYYPIRWNIDLEKLPDEEDTEESENESDRSPSFGLLTTDKPLLKESSETTDKPQKELSSETDDKPPESVTPAASDKPPENVAPAATTKSPENVAGSTSDTSIPVLECYFNQASDDIPVNLHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYI7</accession>
    <name>V7BYI7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G086700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYI7"/>
    <dbReference type="Gramene" id="ESW21636">
        <property type="protein sequence ID" value="ESW21636"/>
        <property type="gene ID" value="PHAVU_005G086700g"/>
    </dbReference>
    <dbReference type="OMA" id="TMLPQRS"/>
    <dbReference type="OrthoDB" id="1419581at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053258">
        <property type="entry name" value="Ca-permeable_cation_channel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34115">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34115:SF16">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="167" mass="19424" checksum="1CCA0C4B6A679A70" modified="2014-02-19" version="1">MAYTDAMNSSPVNPIPMRDDEVNRFRELREIFEKFFVWLFGVLAFKATLQEEALFTAHPNVMIVMIFMIVLYFLLWLLGTMLPQRSVNFLIILVCLMVVIASVSSVLVFSTISSLLAWFSVMAWMGVLALIVYFVYQEFYSLVVRVILDYIKYLTDGYRMQTSRLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ38</accession>
    <name>V7BZ38_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD-dependent oxidoreductase 2 FAD binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G025500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ38"/>
    <dbReference type="SMR" id="V7BZ38"/>
    <dbReference type="STRING" id="3885.V7BZ38"/>
    <dbReference type="Gramene" id="ESW23182">
        <property type="protein sequence ID" value="ESW23182"/>
        <property type="gene ID" value="PHAVU_004G025500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT7P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCNFTNM"/>
    <dbReference type="OrthoDB" id="9930022at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.260">
        <property type="entry name" value="HI0933 insert domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004792">
        <property type="entry name" value="BaiN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023166">
        <property type="entry name" value="BaiN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055178">
        <property type="entry name" value="RsdA/BaiN/AoA(So)-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057661">
        <property type="entry name" value="RsdA/BaiN/AoA(So)_Rossmann"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00275">
        <property type="entry name" value="aminoacetone oxidase family FAD-binding enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887">
        <property type="entry name" value="OS12G0638800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887:SF2">
        <property type="entry name" value="OS12G0638800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03486">
        <property type="entry name" value="HI0933_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22780">
        <property type="entry name" value="HI0933_like_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160996">
        <property type="entry name" value="HI0933 insert domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RsdA/BaiN/AoA(So)-like Rossmann fold-like" evidence="4">
        <location>
            <begin position="57"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="RsdA/BaiN/AoA(So)-like insert" evidence="5">
        <location>
            <begin position="245"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF22780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="482" mass="52547" checksum="DA56272C778FDA6B" modified="2014-02-19" version="1">MAMRRCFVGSGQANTSVFSLSFSSILPTFHYKRTRPRERRCTTHAICHATKSKEELLVVVGGGAAGVYGAIHAKTVAPHLSVVVIEKGKPLSKVKVSGGGRCNVTNGHCVDNMILAENYPRGHKELRGSFFNIHGPVDTMSWFASHGVELKVEDDGRVFPVSNSSSSIIDCLNSEVKQRGVSLQTRKTVAAISILSSGKFLLEIQQHTSVHVERVEADYLLIASGSSRQGYTLASQLGHSIVDPVPSLFTFKIEDLRLRELSGVTFPKVKVRLKLDSVQRNIPKLTQVGPMLVTHWGLSGPAILRLSAWGARFLFSSSYKGQLFVDFIPDLHVENLKSVLSHHKLQYAKQKVLNSCPPEFGITKRFWSYVLERQGLSGDVLWASISNSSLMSIGSVLKNCIFEVTGKGQFKDEFVTAGGVPLSEISLNTMESKVCTRLFFAGEILNVDGVTGGFNFQNAWSGGFIAGTTIGRLALGSCLGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7C000</accession>
    <name>V7C000_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G050600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C000"/>
    <dbReference type="STRING" id="3885.V7C000"/>
    <dbReference type="Gramene" id="ESW23479">
        <property type="protein sequence ID" value="ESW23479"/>
        <property type="gene ID" value="PHAVU_004G050600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2D4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLYIAKV"/>
    <dbReference type="OrthoDB" id="1932454at2759"/>
    <dbReference type="PhylomeDB" id="V7C000"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36396">
        <property type="entry name" value="MALTASE-GLUCOAMYLASE, INTESTINAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36396:SF1">
        <property type="entry name" value="MALTASE-GLUCOAMYLASE, INTESTINAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="18311" checksum="6AD45AE4F7370A5F" modified="2014-02-19" version="1">MAQPSSPSPPPQQTPRPTPQYVEVNCASSGKKRRFAAGTDAGFAVALINRKLKGTVVPASHIEAVKDGEVPIAFGPTSFLSDFGDGWKLQTVTLTDLSSEVRNEQFQQMRMQAPGLVSGVPGTARSVSNPITFVYIVKIIFAFILIFVLGAIFTLFLDNLPAFILSLKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C081</accession>
    <name>V7C081_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alpha/beta hydrolase fold-3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G057500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDXG' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C081"/>
    <dbReference type="SMR" id="V7C081"/>
    <dbReference type="STRING" id="3885.V7C081"/>
    <dbReference type="Gramene" id="ESW23559">
        <property type="protein sequence ID" value="ESW23559"/>
        <property type="gene ID" value="PHAVU_004G057500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1515">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SMCILAW"/>
    <dbReference type="OrthoDB" id="408631at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050466">
        <property type="entry name" value="Carboxylest/Gibb_receptor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024">
        <property type="entry name" value="ARYLACETAMIDE DEACETYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024:SF639">
        <property type="entry name" value="CARBOXYLESTERASE 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha/beta hydrolase fold-3" evidence="3">
        <location>
            <begin position="160"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="92"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="444" mass="48906" checksum="08C404FF52D1F05C" modified="2014-02-19" version="1">MQTPESLILPAMPTVAVKLYSVFFKFLLKNRLQNRIQAPPEESNLFGVTTRPDEAVAAANPSFSDGVATKDIHIDPLTSLSVRIFLPDSALSPEPKTKPISKSEPGSGVRLETASSRAVRRNSYDPLVFTPREETRRSSLGEYRGYSPSVDGCRKKLPVVLQFHGGGWVSGSNDSVANDLFCRRIAKVCDAVVVAVGYRLAPENRFPAAFEDGLKVLNWLAKQANLAECSKSLGGRKLEGHHKHIVDSFGASMVEPWLAAHGNPSRCVLLGASCGANIADYVSRKAVEAGKLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPAANPLIPGQGPPLKLRPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILIKSPQAQVCAEDIAIWVKKYISLRGHEFSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0U1</accession>
    <name>V7C0U1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Aminotransferase class I/classII large domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G071100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism; sphingolipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Sphingolipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0U1"/>
    <dbReference type="SMR" id="V7C0U1"/>
    <dbReference type="STRING" id="3885.V7C0U1"/>
    <dbReference type="Gramene" id="ESW23739">
        <property type="protein sequence ID" value="ESW23739"/>
        <property type="gene ID" value="PHAVU_004G071100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1357">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFGSNAY"/>
    <dbReference type="OrthoDB" id="65434at2759"/>
    <dbReference type="PhylomeDB" id="V7C0U1"/>
    <dbReference type="UniPathway" id="UPA00222"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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    <dbReference type="GO" id="GO:0017059">
        <property type="term" value="C:serine palmitoyltransferase complex"/>
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        <property type="term" value="F:pyridoxal phosphate binding"/>
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        <property type="term" value="F:serine C-palmitoyltransferase activity"/>
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        <property type="project" value="TreeGrafter"/>
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    <dbReference type="GO" id="GO:0046513">
        <property type="term" value="P:ceramide biosynthetic process"/>
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        <property type="project" value="TreeGrafter"/>
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        <property type="term" value="P:sphingosine biosynthetic process"/>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd06454">
        <property type="entry name" value="KBL_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001917">
        <property type="entry name" value="Aminotrans_II_pyridoxalP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050087">
        <property type="entry name" value="AON_synthase_class-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
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    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693">
        <property type="entry name" value="CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693:SF88">
        <property type="entry name" value="SERINE C-PALMITOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
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    <dbReference type="PROSITE" id="PS00599">
        <property type="entry name" value="AA_TRANSFER_CLASS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0746">Sphingolipid metabolism</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="11">
        <location>
            <begin position="102"/>
            <end position="460"/>
        </location>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004760"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00004991"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022919"/>
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    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="487" mass="53879" checksum="D4F39654EE2D9CD1" modified="2014-02-19" version="1">MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLTRTDKLSRCLNLGSYNYLGFAAADEYCTPRVVETLKKYSPSTCSSRVDGGTTELHNELEECVASFVRKPAAIVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCELPEIIAICKKYKVYTYLDEAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELVHYLKHACPAHLYATSISPPAAQQIISSIRVILGEDGSNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARICISASHSREDLIKALQVISRVGDLVGIKYFPAEPAKQQDTSKKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C285</accession>
    <name>V7C285_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G012300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_004G012300g"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264:SF6">
        <property type="entry name" value="OS01G0638800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="15934" checksum="A7F92682BDD56236" modified="2014-02-19" version="1">MKKKKNDGVEKKPRGRFVEEEGGGETIKCSGKHCGSCCGGYVADCVAVCCCPCAVLHCCVLALVKGPFLVGRKCLRLGKKKNKNQKKNKKKGHHEYDDDDDEVEVGVGGVSGSGSDVVDGFDAEKVWRELYQIGHLDFGRVSSSHDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3J9</accession>
    <name>V7C3J9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">MSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G051200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3J9"/>
    <dbReference type="SMR" id="V7C3J9"/>
    <dbReference type="STRING" id="3885.V7C3J9"/>
    <dbReference type="Gramene" id="ESW23486">
        <property type="protein sequence ID" value="ESW23486"/>
        <property type="gene ID" value="PHAVU_004G051200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4177">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKCCGEL"/>
    <dbReference type="OrthoDB" id="194358at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000535">
        <property type="entry name" value="MSP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008962">
        <property type="entry name" value="PapD-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198">
        <property type="entry name" value="ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24198:SF165">
        <property type="entry name" value="ANKYRIN REPEAT-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01415">
        <property type="entry name" value="ANKYRIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49354">
        <property type="entry name" value="PapD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50202">
        <property type="entry name" value="MSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="MSP" evidence="5">
        <location>
            <begin position="4"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="170"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="240"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="269"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="303"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="363"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="391"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="4">
        <location>
            <begin position="424"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="58377" checksum="BF2FE819B721CCE0" modified="2014-02-19" version="1">MDRLIRLEPSNTVIIRVEPGQKWQGKITLHNVMHTMPVAFWLQPLIKSRYLVKPHSGIISPLATLTLEITYHITSTITLPHSFPHSNDSFLLHSVLVPGAAIREPSSMFDAVPSDWFKKKQVFIDSGIKVMFLGSHILAQLVSLGENNEVREALERSDPSWRIVNSTDPRGNTLLHLAIAQGRPDLVQLLLEFEADTEATNRSGLTPLEAAASCNETLIVELLLARRANTERAEWAVFGPIHHAARGGHVEVLRLLLLKGGKVDSLTKDGNTALHVAVEERRRDCVRLLLANGARTDLKNTTEGDTPLHMAAAAGDESMVKLLLQKGRANKDIRNAQGKTAYDVAVENGHERLFDALSLGDKLCAAAKKGEVRTIQKLLEKGADLNGRDQHGWTALHRASFKGRMDVVKVLVERGVEVDAKDEEGYTALHCAAEAGHVDVTEFLVKKGADVEARTSKGVNALQITESLKYVGITRVLVNGGASRENSDKVAAFGAVAFGSKVTEVKKRRSGERRNNRLLNNGAGFGRSVALAVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3Z9</accession>
    <name>V7C3Z9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Membrane-associated kinase regulator 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G102700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3Z9"/>
    <dbReference type="STRING" id="3885.V7C3Z9"/>
    <dbReference type="Gramene" id="ESW24098">
        <property type="protein sequence ID" value="ESW24098"/>
        <property type="gene ID" value="PHAVU_004G102700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPRB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEYRKSC"/>
    <dbReference type="OrthoDB" id="1913205at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044699">
        <property type="entry name" value="MAKR6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34576">
        <property type="entry name" value="MEMBRANE-ASSOCIATED KINASE REGULATOR 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34576:SF2">
        <property type="entry name" value="MEMBRANE-ASSOCIATED KINASE REGULATOR 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="222" mass="25135" checksum="6FAB0AF5C6D92090" modified="2014-02-19" version="1">MEASHPLSIESFSYSWLVNLKPSIESLDGSLRASLDASDEASFIEMDPRMPPSKRFFRNSQDFKFDFPASQSPLTLVDADELFSNGYLMPLFVESLKMEAYEASDANPSLPSSSHVPKIAVPNAHSRCPSLKRCRTLSRRIFQKYLNFLRPLCRRLRSGKSGSKPESVIKRTESAKNRGCYSETSPRISVAYSADDWRKSCDSESSIYEAVLHCKRSIERMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4G1</accession>
    <name>V7C4G1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G075600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4G1"/>
    <dbReference type="Gramene" id="ESW23791">
        <property type="protein sequence ID" value="ESW23791"/>
        <property type="gene ID" value="PHAVU_004G075600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWJZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSEMGML"/>
    <dbReference type="OrthoDB" id="1931260at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045882">
        <property type="entry name" value="GPT1/2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33737:SF23">
        <property type="entry name" value="DUF3741 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33737">
        <property type="entry name" value="OS05G0121800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="430" mass="48006" checksum="F0FE1092B58099CE" modified="2014-02-19" version="1">MEEADIEKRNLQSLKSKMKYDLRKSLAWDSAFSTNSGILDLEELFSTSNSSHTEKGCDMLRPKQDQHLYFNNLKPEIKTAATDGFNLRKSLAWDSAFFTSEGILNHEELSLLNKGLKKSEMGMLPQIEELGISSESNRSIESDASCCTNIQKAFSTARMDGDSVPKLKTGSRYNDSNSCTTLSGEFSSLSSQSHMNASSNGLCSPYKRFSIWQSSPEFSLNFCCISPSVSTDGFFPASSLTESIGSHDGNGIMCSNTFSEVKESNYVSFDASRTVKPSGLRMPSPNIGYFDMNNLLVSIENRDNKSHSRAISKIKSGQMLEDVRNTRTSTWKTRNINNSRIMKFGHSAVSTTGEGKDCLTKDEKMMNARAHEHAFERKTCAKVDKRGVGNKILREKRTIYPKQQGFGRKNTSGQTLCTQEMMHKLHESVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4L6</accession>
    <name>V7C4L6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G005600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4L6"/>
    <dbReference type="Gramene" id="ESW25079">
        <property type="protein sequence ID" value="ESW25079"/>
        <property type="gene ID" value="PHAVU_003G005600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SZAW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPNIKCN"/>
    <dbReference type="OrthoDB" id="1813162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="107" mass="11052" checksum="6A42AF036FA03CE3" modified="2014-02-19" version="1">MNNPNIKNTNLMAKDNPGHILLPPPKGVSSKLLPLKSISDPRNLSGQNKAGLSHKLGSLPMAHTLTNTCAPFGIVWPCISNSSSASLGSKSGAGGCSLKVSFNIACK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4W7</accession>
    <name>V7C4W7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G120900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4W7"/>
    <dbReference type="SMR" id="V7C4W7"/>
    <dbReference type="STRING" id="3885.V7C4W7"/>
    <dbReference type="Gramene" id="ESW24325">
        <property type="protein sequence ID" value="ESW24325"/>
        <property type="gene ID" value="PHAVU_004G120900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RETTICE"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000005">
        <property type="entry name" value="1-aminocyclopropane-1-carboxylate oxidase homolog 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209:SF776">
        <property type="entry name" value="2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209">
        <property type="entry name" value="OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="7">
        <location>
            <begin position="214"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW24325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="40716" checksum="90903F0B96589058" modified="2014-02-19" version="1">MDVAGAGENYDRLQELKSFDDSKAGVKGLVDSGVNKLPRFFIRPPEDLGDGDQLSGGKPGAQFMVPVIDLGRVAGDRADLVSEVRRAAEAVGFFQVVNHGIPVKVLEETLVAAREFHELAQEVKGEYYSREVMKKVKYGSNFDLYQSKYANWRDTLFCVMGPEPLDPQALPPICRDVTMEYSKQVHVLGKVLFGLLSEALGLNPDHLEGMDCAKGHSILFHYYPACPEPELTMGTTRHSDPDFLTILLQDHIGGLQVLSHNGWVDVPPVPEALVVNIGDLLQLISNGRFKSVEHRVLANRIGPRVSVACFFTLHLYPTARMYGPIKELLSEDNPPVYRETSLKDFIAYYDGKGLDGNSALNHFMITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5Y4</accession>
    <name>V7C5Y4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G120000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Membrane</location>
            <topology evidence="10">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5Y4"/>
    <dbReference type="STRING" id="3885.V7C5Y4"/>
    <dbReference type="Gramene" id="ESW24316">
        <property type="protein sequence ID" value="ESW24316"/>
        <property type="gene ID" value="PHAVU_004G120000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQT2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKKTNLY"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="PhylomeDB" id="V7C5Y4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000123">
        <property type="entry name" value="Putative methyltransferase PMT15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108:SF1049">
        <property type="entry name" value="METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW24316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="627" mass="71096" checksum="AB9358B5A3021DE6" modified="2014-02-19" version="1">MPSSDSTSPYHPTAKPSKPNTHCKKTNLYSLVALLCIFSYTFGAYRQTSKPTATLTTKPCFHSPPSTSHLDFSSHHNATATSLPLSTSTSRYPPCDVSLSEYTPCEDHARSLRYSRRRMVYRERHCPTKTEALKCRVPAPHGYRNPFPWPASRDVAWYANVPHRELTVEKAVQNWIRYQGDRFHFPGGGTMFPDGADKYIDDIGKLVSLRDGSVRTAVDTGCGVASWGAYLLSRDIIAVSIAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDMAHCSRCLIPWAEYDGLYLNEIDRILRPGGYWILSGPPIRWKKHWKGWERTKDDLNEEQTKIENVAKSLCWNKLVEKDDIAIWQKAKNHLECKANRKLTHNRPFCKAQGSPDKAWYTDMQTCLSPLPDVSSKEETAGGALKNWPDRLKATPPRISMGTIKGVTPETFSNDNKLWKKRVSYYKNVNNQLGKAGRYRNLLDMNAYLGGFAAALIDSPVWVMNVVPVQAKVDTLGAIFERGLIGTYHNWCEAMSTYPRTYDLIHADSVFSLYNDRCELEDIVLEMDRILRPEGSVIIRDDVDILVKVKSIVNGMDWDSQIVDHEDGPLEREKLLFAVKNYWTSPLHPNKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6Y8</accession>
    <name>V7C6Y8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G079200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DVL/RTFL small polypeptides family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6Y8"/>
    <dbReference type="Gramene" id="ESW25947">
        <property type="protein sequence ID" value="ESW25947"/>
        <property type="gene ID" value="PHAVU_003G079200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SEPH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLCWQNV"/>
    <dbReference type="OrthoDB" id="1693826at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008285">
        <property type="term" value="P:negative regulation of cell population proliferation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048367">
        <property type="term" value="P:shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012552">
        <property type="entry name" value="DVL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051525">
        <property type="entry name" value="DVL_RTFL_regulatory"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33102">
        <property type="entry name" value="DVL19-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08137">
        <property type="entry name" value="DVL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="85" mass="9938" checksum="5E69C400D51901F1" modified="2014-02-19" version="1">MDNSYSTTPPPSSSTQAPPCEKDSSMKKRFLKRAKEHRSRLYILKRCIIMLLCWQNVKEGERKDTISHEDRDISLLLKKVLEDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C770</accession>
    <name>V7C770_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G085900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C770"/>
    <dbReference type="Gramene" id="ESW26032">
        <property type="protein sequence ID" value="ESW26032"/>
        <property type="gene ID" value="PHAVU_003G085900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4A8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKYHITI"/>
    <dbReference type="OrthoDB" id="649865at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34125">
        <property type="entry name" value="OS01G0762900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34125:SF7">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="96" mass="10681" checksum="E5C80029982B84A4" modified="2014-02-19" version="1">MDVTKMLVQYKYHITIAIAFSLSLSFMLYAAPRIMTILAYFWPLFASTTIFLAAIIAFGGVSKFSTEDHGHGEKAGEGLLDYVTGVPEHTEEARNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C867</accession>
    <name>V7C867_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Bet v I/Major latex protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G109100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the BetVI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C867"/>
    <dbReference type="SMR" id="V7C867"/>
    <dbReference type="STRING" id="3885.V7C867"/>
    <dbReference type="Gramene" id="ESW26319">
        <property type="protein sequence ID" value="ESW26319"/>
        <property type="gene ID" value="PHAVU_003G109100g"/>
    </dbReference>
    <dbReference type="OMA" id="LINTCPC"/>
    <dbReference type="OrthoDB" id="1858506at2759"/>
    <dbReference type="PhylomeDB" id="V7C867"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010427">
        <property type="term" value="F:abscisic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004864">
        <property type="term" value="F:protein phosphatase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0038023">
        <property type="term" value="F:signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07816">
        <property type="entry name" value="Bet_v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.530.20:FF:000007">
        <property type="entry name" value="Major pollen allergen Bet v 1-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000916">
        <property type="entry name" value="Bet_v_I/MLP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024949">
        <property type="entry name" value="Bet_v_I_allergen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050279">
        <property type="entry name" value="Plant_def-hormone_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31213">
        <property type="entry name" value="OS08G0374000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31213:SF55">
        <property type="entry name" value="STRESS-INDUCED PROTEIN SAM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00407">
        <property type="entry name" value="Bet_v_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00634">
        <property type="entry name" value="BETALLERGEN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00451">
        <property type="entry name" value="PATHOGENESIS_BETVI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0568">Pathogenesis-related protein</keyword>
    <keyword evidence="2 4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bet v I/Major latex protein" evidence="5">
        <location>
            <begin position="1"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="156" mass="16529" checksum="43C7830E19E88FA5" modified="2014-02-19" version="1">MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGVALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C942</accession>
    <name>V7C942_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G135800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C942"/>
    <dbReference type="STRING" id="3885.V7C942"/>
    <dbReference type="Gramene" id="ESW26639">
        <property type="protein sequence ID" value="ESW26639"/>
        <property type="gene ID" value="PHAVU_003G135800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4667">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="9988524at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000170">
        <property type="entry name" value="Alpha/beta-Hydrolases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42886:SF53">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42886">
        <property type="entry name" value="RE40534P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="1">
        <location>
            <begin position="77"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="311" mass="35010" checksum="6253EE6B3EC54FDF" modified="2014-02-19" version="1">METFLQNASSLFFNSSLSTTPKISHYQVRFSIPCNHKSTRKTFILSMAPTPAVEQHRVTIPNKHGEKLVGILHESGSREIVILCHGFRSSKEANVIVNLAASLENARLSSFRFDFSGNGESDGSFQYGYYRREAEDLRAVIQHFHESNRGVSAIVGHSKGGDVVLLYASKYHDIKTVVNLSGRYDLKAGIEERLGKDHLERIKKDGFIDVERSGNFEYRVTLESLMDRLDTNMHEACLQIDEECRVLTVHGSSDKVVPAEDASKFAKIIPNHKLHIIEKANHSFTDHQDELSSVVVNFIKETLHKDRGTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA44</accession>
    <name>V7CA44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphate transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G064900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Sodium-phosphate symporter.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA44"/>
    <dbReference type="SMR" id="V7CA44"/>
    <dbReference type="STRING" id="3885.V7CA44"/>
    <dbReference type="Gramene" id="ESW25781">
        <property type="protein sequence ID" value="ESW25781"/>
        <property type="gene ID" value="PHAVU_003G064900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2493">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AWKTGNA"/>
    <dbReference type="OrthoDB" id="260807at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035435">
        <property type="term" value="P:phosphate ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001204">
        <property type="entry name" value="Phos_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11101">
        <property type="entry name" value="PHOSPHATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11101:SF80">
        <property type="entry name" value="PHOSPHATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01384">
        <property type="entry name" value="PHO4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="214"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="245"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="305"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="333"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="398"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="452"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="508"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="539"/>
            <end position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="568" mass="59383" checksum="24675E40ADE817A3" modified="2014-02-19" version="1">MNPSCRFASTKHTPFLQNSHITSPFFLRHSHRVKTHLSLPSPTIAPKPSSVNILRFRHLGAAKRFATLSSFAEGEAGGREEEVQAANGNEVDGLAKAFDISSGTASAISICMALAVLSFPLMMKSLGQGLAVKTKVLSYATLLFGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTNTMQKGILLANVFNGKDTLLFAGLLSSLAAAGTWLQIASYYGWPVSTTHCIVGAMVGFGLAYGGAGAVFWGSLARVISSWVVSPLMGAAVSFLVYKCIRRFVYSAPNPGLAAAAAAPIAVFMGVTGISFVAFPLSKSFPLALAQALVSGTVGAFLVDRIIRKQLGHLLVKSNTPKPESKEDTVHHNIGFLDDVAGPKGAQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGGAAGAEIVIPIDVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGFNSVRSETVKEIVASWVVTIPVGAVLSVIYTWILTRILSYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA46</accession>
    <name>V7CA46_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MULE transposase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G167900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA46"/>
    <dbReference type="STRING" id="3885.V7CA46"/>
    <dbReference type="Gramene" id="ESW27034">
        <property type="protein sequence ID" value="ESW27034"/>
        <property type="gene ID" value="PHAVU_003G167900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSE3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WFLERAL"/>
    <dbReference type="OrthoDB" id="1304958at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973:SF195">
        <property type="entry name" value="MUDR FAMILY TRANSPOSASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973">
        <property type="entry name" value="POLYPROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MULE transposase" evidence="1">
        <location>
            <begin position="162"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="411" mass="47361" checksum="D09D294B401F55CA" modified="2014-02-19" version="1">MQMDTWNVGGTSLSEHEEPIIRDIVDDISEDGENYDFDLDDEDQFNRSSSQYILSGSQSEHNIDRDLNEHTCFMSKEATLNAIKQYHIDNGYKFVVVESKPDRYVPRWLEAVKESNPGTIVQYIASPCMVDGAQDNSCYTLDRVFWSFKPCIDGFNFCKPIVQVDGTFLTERYHGTLLTAIAQDGNWNIFPLAFAIVEGETREALIWFFQLLRQYVTPQPNLCMITDKGTGIISALQSEEVGWEGDDLVSMKQLIVQTKLSIMRSEFNQAFSWIDRIPLEKCTQAYDGGKRYGHMTTNLAECINFVLKGARSLPIFALVKATFEKTKTWFLERALKIDTMLRAGHHYPEDITILFRKNQQDSTMCFVERFNIENSEFDVQELATPQHGRRPQSYTVRLNDWWCDCGHFQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAA0</accession>
    <name>V7CAA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G097200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAA0"/>
    <dbReference type="SMR" id="V7CAA0"/>
    <dbReference type="STRING" id="3885.V7CAA0"/>
    <dbReference type="Gramene" id="ESW26180">
        <property type="protein sequence ID" value="ESW26180"/>
        <property type="gene ID" value="PHAVU_003G097200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTICAIH"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="PhylomeDB" id="V7CAA0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000047">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000302">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047:SF45">
        <property type="entry name" value="SCOPOLETIN GLUCOSYLTRANSFERASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="473" mass="52943" checksum="F49020394A22E73A" modified="2014-02-19" version="1">MEETRPLKLYFIHFLAAGHMIPLCDIATLFASRRHHVTIITTPSNALTLRKSIPSHPFLHLHTVHFPSQEVGLPDGIENLSSVTDVDNLAKVFNATTMLQPPIQKFVEENPPDCIVADFLFPWVDDLANNLNIPRLAFNGFSLFTICAIHSSQPTSSLLSPTLPHPITLNASPPKELSEFLDKLLETELRSYGLIVNNFAELDGEEYIRYYEKTTGHKAWHLGPASLISRTPEEKAERGMKSVVSMQECVSWLDSKAENSVVYICFGSLCYFSDKQLYEIACGIEASGHGFIWVVPEKKGKEKERQEEKEKWMPEGFEERNAEKGMVIRGWAPQLLILNHRAVGAFVSHCGWNSSVEAVSGGVPMITWPVHGEQFYNEKLISEVRGIGVEVGAAEWTTIGLGERQMVVCRESIERGVRRIMDGGVEAEEVRRRAKEFGKKAREAVGEGGSSHKNLTALIHDLTRLRDAKLLPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC20</accession>
    <name>V7CC20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ACT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G221600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC20"/>
    <dbReference type="SMR" id="V7CC20"/>
    <dbReference type="STRING" id="3885.V7CC20"/>
    <dbReference type="Gramene" id="ESW27669">
        <property type="protein sequence ID" value="ESW27669"/>
        <property type="gene ID" value="PHAVU_003G221600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3076">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QILNIHH"/>
    <dbReference type="OrthoDB" id="4239773at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008864">
        <property type="term" value="F:formyltetrahydrofolate deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04875">
        <property type="entry name" value="ACT_F4HF-DF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08648">
        <property type="entry name" value="FMT_core_Formyl-FH4-Hydrolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.170">
        <property type="entry name" value="Formyl transferase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041729">
        <property type="entry name" value="Formyl-FH4-Hydrolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004810">
        <property type="entry name" value="PurU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044074">
        <property type="entry name" value="PurU_ACT"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004684">
        <property type="entry name" value="PRK06027.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706">
        <property type="entry name" value="FORMYLTETRAHYDROFOLATE DEFORMYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706:SF1">
        <property type="entry name" value="FORMYLTETRAHYDROFOLATE DEFORMYLASE 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036480">
        <property type="entry name" value="FormyFH4_hydr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01575">
        <property type="entry name" value="FFH4HYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="Formyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="35"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="317" mass="36034" checksum="9F4A10E538953146" modified="2014-02-19" version="1">MARSFPRVMGLTKMCRNRNISFKSLDPPSSLTHGIHVFHCPDAVGIVAKLSDCIASRGGNILAADVFVPENKQVFYSRSDFVFDPVKWPRVQMEEDFLKLSQTFNAIRSVVRVPALDPKYKIAVLASKQDHCLVDLLHAWQDGRLPVDITCVISNHYRGSNTHVIRFLERHDIPYHYLCTTNENKREGEMLQLVQNTDFLVLARYMQILSGNFLRSYGNDIINIHHGLLPSFKGGSPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLSKAIRSYCELRVLPYEEKKTVVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC21</accession>
    <name>V7CC21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G227900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC21"/>
    <dbReference type="SMR" id="V7CC21"/>
    <dbReference type="Gramene" id="ESW27737">
        <property type="protein sequence ID" value="ESW27737"/>
        <property type="gene ID" value="PHAVU_003G227900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THAGMVM"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000927">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002117">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002147">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF485">
        <property type="entry name" value="REPEAT-LIKE SUPERFAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="71"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="173"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="235"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="268"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="370"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="597" mass="67443" checksum="B8F228D406AB5916" modified="2014-02-19" version="1">MTVRGKHEQVLFAALESRKELQELRQLLVQLVVSGLSQHPLFATSAIKKLSSHSLTLPRATSFFDHLHHPDAFHCNTIIRAYTRKSDFSAALSFYYHRMLPRSVLPNHYTFPLLIKLCTDIGSLREGLKGHARIIKFGFGYDLFARNSLIRMYSVFGRIRLARMLFNESSRLDLVSYNSMVDGYVKNGEIGAARQLFDEMPERDVLSWNCMIAGFVGIGDLDTANELFETMPERDVVSWNCMIDGCSKVGNASLAVEFFNRMPASVKNVVSWNSMLALHARVKNYGECLRLFGRMMEGREVMPNEATLVSVLTACASLGRLGLGMWVHSFIRSNNIKSDVLLSTCLLTMYSKCGAMDLARDVFYEMPVRSVVSWNSMIMGYGLHGNGDKALELFLEMEKEGTQPNDATFICVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRKVPLKAGSAVWGALLSGCTNHLESELGEIVAKRLIELEPQDIGPYILLSNMYAAQGRWDDVERVRLMIKEKGLQKEAASSLVHLEDFESKYFAKNNSGYRKRIMHSMLSELGTQMKLSVGQSIKEDSFIPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCD4</accession>
    <name>V7CCD4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G237700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCD4"/>
    <dbReference type="Gramene" id="ESW27852">
        <property type="protein sequence ID" value="ESW27852"/>
        <property type="gene ID" value="PHAVU_003G237700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="993217at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="AntiFam" id="ANF00039">
        <property type="entry name" value="Antisense to SRP RNA"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="71" mass="8230" checksum="51579216AFFA0B4F" modified="2014-02-19" version="1">MGRRCRQPVIPPLPRAGGYRCSVKPTSHITFQSKIKEIQAFPQIPLINSWFGVFRMSRIFKHILGENHIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDC2</accession>
    <name>V7CDC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Alpha-mannosidase</fullName>
            <ecNumber evidence="11">3.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G264400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides.</text>
            <dbReference type="EC" id="3.2.1.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the glycosyl hydrolase 38 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.-" evidence="11"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDC2"/>
    <dbReference type="SMR" id="V7CDC2"/>
    <dbReference type="STRING" id="3885.V7CDC2"/>
    <dbReference type="Gramene" id="ESW28167">
        <property type="protein sequence ID" value="ESW28167"/>
        <property type="gene ID" value="PHAVU_003G264400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1959">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIWRPSK"/>
    <dbReference type="OrthoDB" id="2016903at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004559">
        <property type="term" value="F:alpha-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006013">
        <property type="term" value="P:mannose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10810">
        <property type="entry name" value="GH38N_AMII_LAM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1270.50:FF:000002">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1270.50:FF:000003">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1180:FF:000030">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1360:FF:000001">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.70.98.30:FF:000004">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.110.10:FF:000001">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.110.10">
        <property type="entry name" value="Glycoside hydrolase 38, N terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.50">
        <property type="entry name" value="Glycoside hydrolase family 38, central domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="entry name" value="Golgi alpha-mannosidase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.30">
        <property type="entry name" value="Golgi alpha-mannosidase II, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041147">
        <property type="entry name" value="GH38_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011682">
        <property type="entry name" value="Glyco_hydro_38_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015341">
        <property type="entry name" value="Glyco_hydro_38_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037094">
        <property type="entry name" value="Glyco_hydro_38_cen_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000602">
        <property type="entry name" value="Glyco_hydro_38_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027291">
        <property type="entry name" value="Glyco_hydro_38_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028995">
        <property type="entry name" value="Glyco_hydro_57/38_cen_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050843">
        <property type="entry name" value="Glycosyl_Hydrlase_38"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048534">
        <property type="entry name" value="Man2a1-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11607">
        <property type="entry name" value="ALPHA-MANNOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11607:SF61">
        <property type="entry name" value="ALPHA-MANNOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09261">
        <property type="entry name" value="Alpha-mann_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17677">
        <property type="entry name" value="Glyco_hydro38C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07748">
        <property type="entry name" value="Glyco_hydro_38C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01074">
        <property type="entry name" value="Glyco_hydro_38N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21260">
        <property type="entry name" value="Laman-like_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00872">
        <property type="entry name" value="Alpha-mann_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88688">
        <property type="entry name" value="Families 57/38 glycoside transferase middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="Galactose mutarotase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="Glycoside hydrolase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10 11" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0732">Signal</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755647" description="Alpha-mannosidase" evidence="11">
        <location>
            <begin position="26"/>
            <end position="1012"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 38 central" evidence="12">
        <location>
            <begin position="361"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW28167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1012" mass="113211" checksum="03585E497CB48E55" modified="2014-02-19" version="1">MGTPLAAEALSAFLLLSFYATLVSTKYINYNTGAAIVPAKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVENVLDSVVVSLQKDPNRKFVFAEMAFFHRWWVEQSPETQEEVRKLVDAGQLEIINGGWCMHDEAATHYIDMIDQTTLGHRFIKDEFNKTPTVGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRAKRKADKSLEVVWRASKTFGSSAQIFANAFPVHYSAPNGFNFEVNNVDIDVVPVQDDPLIFDYNVEKRVQDFIDAAITQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTNAKNAAQQTWPLKTDDYFPYADRANAYWTGYFTSRPALKRYVRMISGYYLATRQLESFVGKQSDKYNTFGLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGVSEAESVVSSSLACLTSKKSSGQCSAPASAFAQCHLLNISYCPPTEDGIPDAKSLVVVAYNPLGWKRTDIVKIPVNDANLVVKDTLGNNIEVQYVGVDDVTTKLRKLYVKAYLGVSPKQAPKYWLLFQASVPPLGWSTYFISKATGKGSRTKNLSHLGTQKGDTIDIGPGNLKMSFSSASGQLKRMYNSRTGVDIPIQQSYLYYGSSEGDNDPQASGAYIFRPNGSPPTIVSRSVPIKVIRGPLVHEVHQKFSSWIYQVTRLYKDKDHAEVEFTIGPIPTDDGVGKEVITRMTANMATNKEFYTDSNGRDFLKRVRDHRDDWPLQVTQPIAGNYCPLNLGIYTKDKKSEFSVLVDRATGGASIKDGEVELMLHRRILRDDSRGVGEPLDEQVCVNNNETCEGLTVRGNYYISIDKLGAGARWRRTTGQEIYSPFLLAFTHENLESWKSSHLTKGTIMDPNYSLPPNVALITLEELEGGIVLLRLAHLYEPSEDAEYSTLTKVELKKLFAKKTIKELKEVSLSANQEKSEMKRMTWKVEGDKGQEPQGLRGAPVSSPNLVVELGPMEIRTFLLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG98</accession>
    <name>V7CG98_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Zinc metallopeptidase EGY3, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G050700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG98"/>
    <dbReference type="STRING" id="3885.V7CG98"/>
    <dbReference type="Gramene" id="ESW29192">
        <property type="protein sequence ID" value="ESW29192"/>
        <property type="gene ID" value="PHAVU_002G050700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ7R">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRPQFFD"/>
    <dbReference type="OrthoDB" id="2016505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044838">
        <property type="entry name" value="EGY1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31412:SF2">
        <property type="entry name" value="ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31412">
        <property type="entry name" value="ZINC METALLOPROTEASE EGY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="6 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="266"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="299"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="371"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="404"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="442"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="481"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="531"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="77"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="117"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="80"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW29192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="567" mass="61675" checksum="23C9F5460AC66B09" modified="2014-02-19" version="1">MAVPMPTLSALSFTALLNANTNTSSRTTCTFPLHSNIHTRLSFSFCSKRTSLTCATSSHKDDQQTDSSSTATVAVAPENDVDHDSGSHSDSDSDTQQEMDWKSDEEFKKFMGNPSIEAAIKLEKKRADRKLKQLDRETTNSNPLLGLFNTLVRDNLLREKERLQKAEQTFKALDLNQLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEVIPKLEKKLSDAAGRDVVVWFMEEEANDITKQACVVQPKAEMDLQFESTKLSTPLGYFSAILLAVTTFGTVALMSGFFLKPDATFDDYLANVVPLFGGFLFILGVSEITTRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLLLAIAAFVADGSFNGGDNALYIRPQFFYNNPLLSFIQYVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRNTATLLSFGTSLLLGVGGLSGSVLCLAWGLFATFFRGGEEIPAKDEISPLGESRYAWGIILGLICFLTLFPNGGGTFSSSFLSAPFFRGDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGD5</accession>
    <name>V7CGD5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Histone deacetylase</fullName>
            <ecNumber evidence="3 12">3.5.1.98</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G054700g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10 12">
            <text>N(6)-acetyl-L-lysyl-[histone] + H2O = L-lysyl-[histone] + acetate</text>
            <dbReference type="Rhea" id="RHEA:58196"/>
            <dbReference type="Rhea" id="RHEA-COMP:9845"/>
            <dbReference type="Rhea" id="RHEA-COMP:11338"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:61930"/>
            <dbReference type="EC" id="3.5.1.98"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 12">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11 12">Belongs to the histone deacetylase family. HD Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.98" evidence="3 12"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGD5"/>
    <dbReference type="SMR" id="V7CGD5"/>
    <dbReference type="STRING" id="3885.V7CGD5"/>
    <dbReference type="Gramene" id="ESW29237">
        <property type="protein sequence ID" value="ESW29237"/>
        <property type="gene ID" value="PHAVU_002G054700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1342">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1918432at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000118">
        <property type="term" value="C:histone deacetylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0141221">
        <property type="term" value="F:histone deacetylase activity, hydrolytic mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0040029">
        <property type="term" value="P:epigenetic regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.800.20:FF:000001">
        <property type="entry name" value="Histone deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="entry name" value="Histone deacetylase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003084">
        <property type="entry name" value="HDAC_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="HDACs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625:SF44">
        <property type="entry name" value="HISTONE DEACETYLASE 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10625">
        <property type="entry name" value="HISTONE DEACETYLASE HDAC1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037913">
        <property type="entry name" value="His_deacetylse_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01271">
        <property type="entry name" value="HISDACETLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="Arginase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 12" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0678">Repressor</keyword>
    <keyword evidence="8 12" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 12" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Histone deacetylase" evidence="17">
        <location>
            <begin position="36"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="384"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="16">
        <location>
            <begin position="432"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00061569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR037913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR037913-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR037913-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR037913-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW29237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="56104" checksum="6036DFBDF771E677" modified="2014-02-19" version="1">MESGGNSLPSGSDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPTAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDTGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETSVALGIELDDKMPQHEYYEYFGPVYALHVAPSNMENKNSRNLLDEIRAKLLDNLSRLQHAPSVPFQERPPDAELQERDEDQDDRDERWDPDSDMEVDDDSKPRRRVKSERVEAEHKDAESYHKHLDCGRDFLTPFKEIACSKVSGVDSMAVDEPCIKEEQDNVKELSDHRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGV1</accession>
    <name>V7CGV1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="24">Cysteine-rich receptor-like protein kinase 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_002G063700g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="23" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGV1"/>
    <dbReference type="SMR" id="V7CGV1"/>
    <dbReference type="Gramene" id="ESW29353">
        <property type="protein sequence ID" value="ESW29353"/>
        <property type="gene ID" value="PHAVU_002G063700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29354">
        <property type="protein sequence ID" value="ESW29354"/>
        <property type="gene ID" value="PHAVU_002G063700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRU4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYDSAHY"/>
    <dbReference type="OrthoDB" id="1908121at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000336">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000005">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000015">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:001208">
        <property type="entry name" value="Putative DUF26-domain receptor-like protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052059">
        <property type="entry name" value="CR_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47973">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 17" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 17" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-0675">Receptor</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 19" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732328" description="Cysteine-rich receptor-like protein kinase 2" evidence="19">
        <location>
            <begin position="29"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="257"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="32"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="138"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="323"/>
            <end position="578"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="351"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW29354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="24">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="649" mass="72239" checksum="266036522A7B785D" modified="2014-02-19" version="1">MKKVVSLVFLCNLSLLIKLLLLSKTVIAEPRDKTVLVTCGHVPGHNNTIFVPNFIATMDKISDEMRKTGFGTAVVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCYPYNSGRIFLDGCFMRAENYSFFNEYTGPGDKAVCGNMTKKNSSFQAAAKQAVSRAVQDAPNNKGYARGNVAVEGATNQSVYVLADCWRTLDKRSCKACLENAFFSLLGCLPWSEGRALNTGCFMRYSDTDFLDKEQETGSSRGNVVVIVVAVVSSVIVSVVGVTIGVYIWKQRYIEKKRRGSNDAEKLAKSLQNKSLNFKYSTLDKATGSFHENNKLGQGGFGTVYRGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCLGPESLLVYEFLPNKSLDRFIFDKNKGKELNWEKRFEIIIGTTEGLVYLHENSKTRIIHRDIKASNILLDGKFRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEMATGRQNNRSKESDDSDSLVTVAWKHFQAGTAEQLFDPNLVLQEDHNIEVKDEILRGVHIGLLCTQEVPSLRPIMSKTLQMLTKKEENLIAPSNPPFLDKNTMELHDTNGDPFYPLNESDSIATMSRSSIYPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGW1</accession>
    <name>V7CGW1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G0698001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGW1"/>
    <dbReference type="Gramene" id="ESW29427">
        <property type="protein sequence ID" value="ESW29427"/>
        <property type="gene ID" value="PHAVU_002G0698001g"/>
    </dbReference>
    <dbReference type="OMA" id="ELVYVVY"/>
    <dbReference type="OrthoDB" id="1432634at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13603" checksum="DD61529CA6234413" modified="2014-02-19" version="1" fragment="single">VHTKRRNRLHQKKMNDLVYVMYNLKLSNKQIRKTVALPFDDIQSDDEWITEEGDNIDEIDQVQDANVHLNPAITVPTLDAFDLENLTFDVNVDEDEDEDGDDDGDDGDDIIRGLDMEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH12</accession>
    <name>V7CH12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G069500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPR family. PCMP-E subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH12"/>
    <dbReference type="SMR" id="V7CH12"/>
    <dbReference type="Gramene" id="ESW29424">
        <property type="protein sequence ID" value="ESW29424"/>
        <property type="gene ID" value="PHAVU_002G069500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GGNWYES"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000284">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000797">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001535">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001713">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF344">
        <property type="entry name" value="OS07G0636900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="167"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="268"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="370"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="439"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="470"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="571"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="606"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00061659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="825" mass="92253" checksum="DEE34AF28E6D14ED" modified="2014-02-19" version="1">MTLYMPLFRSCFTLRSLTQLHSHLVVTGLHTDPLASTKLLESYAQMGSLPSSRLVFETHPSPDSFMFGVLIKCYLWHQLFHQVVSLYNHHIQKGSHLIQNCTFLYPSVLKAVSGVGDLVMGRKVHGRIVRSGFGNDHVIGTSLLSMYGELGCLNDARNVFDEMHVRDLVSWSSVIACYVENGRPQQGLEMLHWMVSERIELDSVTMLSVAEACGKVGCLKLAKSVHGYGIRKEMVGDASLRNALIVMYSQCSYLSGAKGVFESVGDRSISCWTSMISSCYQNGCFEEAMDAFRKMQESEVEVNAVTMISVLSCCARLGWLKEGMSVHSFILRREMNGADLDIGPALMDFYAAFWKISSCEKLLHLIGNSSVVSWNTLISIYAQEGLNKEAMVLFARMLEKGLMPDTFSLASSTSASADAGSILFGQQIHGHVMKRGFRDEFVQNSLMDMYSKCGFVDLAYTIFDKIREKSIVTWNCMISGFSQNGISVEALKLFDEMYFNCIDINEVTFLSAIQACSNSGYLEKGKWIHHKLIVSGVQRDLYIDSALVDMYAKSGDLLTAKGVFDSMAEKSVVSWSVMIAAYGIHGHITSATTLFTKMVESHIKPNGVTFLNILSACRHAGSVEEGKFYFDLMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCLPIDASTWSALLNGCRIHGRMDLIKNIHKELREIRTDDTGHYTLLSNIYAEGGNWYESRKVRSRMEGLGLKKVPGFSSIEIDKKIYRFGAGDTSSEWQMKEIYMFLQNFQSLAQEQGCDVECHGTMFGPSMFFEDHRAYNLQRETRSCILNKSIPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH70</accession>
    <name>V7CH70_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Fatty acid hydroxylase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G074300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the sterol desaturase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH70"/>
    <dbReference type="STRING" id="3885.V7CH70"/>
    <dbReference type="Gramene" id="ESW29489">
        <property type="protein sequence ID" value="ESW29489"/>
        <property type="gene ID" value="PHAVU_002G074300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0873">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIMFYYA"/>
    <dbReference type="OrthoDB" id="1658724at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050307">
        <property type="entry name" value="Sterol_Desaturase_Related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11863">
        <property type="entry name" value="STEROL DESATURASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="162"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="7">
        <location>
            <begin position="113"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="31822" checksum="4FF903B17D8AF157" modified="2014-02-19" version="1">MASLVQSSWQFLITHFSEFQLACLGTFFLHESVFFLSGLPYMMLERSRWLSKYKIQGKNNSPAAQEKCISRLILYHFGVNLPVVIISYPLLKRMGMQISLPLPSWKIIFIQIVFYFILEDFIFYWGHRILHTKWLYTTVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPVLTGPHLMTLWLWMILRVLETVEVHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSRNYSSTFTYMDRIFGTDTGYTNLKASKKAEAEISSEQKKQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHH1</accession>
    <name>V7CHH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Suppressor of white apricot N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G018900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHH1"/>
    <dbReference type="STRING" id="3885.V7CHH1"/>
    <dbReference type="Gramene" id="ESW28798">
        <property type="protein sequence ID" value="ESW28798"/>
        <property type="gene ID" value="PHAVU_002G018900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2548">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YSECAPV"/>
    <dbReference type="OrthoDB" id="10070965at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040397">
        <property type="entry name" value="SWAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019147">
        <property type="entry name" value="SWAP_N_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13161:SF4">
        <property type="entry name" value="CLK4-ASSOCIATING SERINE_ARGININE RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13161">
        <property type="entry name" value="SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09750">
        <property type="entry name" value="DRY_EERY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01141">
        <property type="entry name" value="DRY_EERY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="2" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Suppressor of white apricot N-terminal" evidence="4">
        <location>
            <begin position="39"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="143"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="239"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="393"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="184"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="239"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="263"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="284"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="404"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="430"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="453"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="482"/>
            <end position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="552" mass="64204" checksum="6232E4E2978D323E" modified="2014-02-19" version="1">MWHEARRSEKKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQLVGFRSRTYRDDALYQATQDQQGLIPWNGKQDVLIDRFDGRALLDFIRDSSHRRAPEKSEEEEELEEFVNFERYRDLVKHRRRGFTDEEALQHVNQEMEAKAAAPFTSDRSNLPQPSASKGSYSQVGFSYDGNGKEETHISDDDDNDNDNEEDEDDEDDEDFNSDDSNDEGMEIIAKEYGVKRYGWLVYMDKKAKEEEKRQKELIKGDPAIRKLSRKERRKASQIEREREREATRISGTRVLHHDPYREPRQSPTYEAYSRSRRSRSRSRSYSPSHSRRYSRSSHADDIHRSKPRTPKIEYITEFGSSGAADEPRLEGFSPPRSPTSQVDMLNRPSSGCILEALHVDPASGVSIDKDKGTKVAKPSVSASSALAKLKAGGSGGPLKQQGEKKETPQERLKRIMNRQLNKQIKKDTAAELAKKREQERQRQEKLAETSRLSRYRRHSRSRSRSFSRSPPRRFRRSRSPSRSRSSRRHYSSSRSRSPSRTRSRSRSRSPYSRSPRTRNRSRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHR0</accession>
    <name>V7CHR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Xaa-Pro aminopeptidase</fullName>
            <ecNumber evidence="4">3.4.11.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G0270001g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Release of any N-terminal amino acid, including proline, that is linked to proline, even from a dipeptide or tripeptide.</text>
            <dbReference type="EC" id="3.4.11.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the peptidase M24B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.9" evidence="4"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHR0"/>
    <dbReference type="STRING" id="3885.V7CHR0"/>
    <dbReference type="Gramene" id="ESW28898">
        <property type="protein sequence ID" value="ESW28898"/>
        <property type="gene ID" value="PHAVU_002G0270001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2413">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AMAKFPP"/>
    <dbReference type="OrthoDB" id="9995434at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01085">
        <property type="entry name" value="APP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.350.10:FF:000010">
        <property type="entry name" value="Probable Xaa-Pro aminopeptidase P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.230.10:FF:000007">
        <property type="entry name" value="Xaa-Pro aminopeptidase P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="entry name" value="Creatinase/methionine aminopeptidase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="entry name" value="Creatinase/prolidase N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033740">
        <property type="entry name" value="Pept_M24B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032416">
        <property type="entry name" value="Peptidase_M24_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001131">
        <property type="entry name" value="Peptidase_M24B_aminopep-P_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050422">
        <property type="entry name" value="X-Pro_aminopeptidase_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763:SF12">
        <property type="entry name" value="AMINOPEPTIDASE P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43763">
        <property type="entry name" value="XAA-PRO AMINOPEPTIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16189">
        <property type="entry name" value="Creatinase_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16188">
        <property type="entry name" value="Peptidase_M24_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="Creatinase/aminopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00491">
        <property type="entry name" value="PROLINE_PEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M24" evidence="12">
        <location>
            <begin position="230"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M24 C-terminal" evidence="13">
        <location>
            <begin position="478"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF16188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW28898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="540" mass="60404" checksum="287028A82824B9BA" modified="2014-02-19" version="1" fragment="single">NLPKEAFIGVDPWCISIDTAQRWERAFSEKQQKLVQTTKNLVDEVWKNRPQAEINAVIVHPLKFAGRSVADKLKDLRKRLLQEQARGIIFTALDEVAWLYNIRGSDVDYCPVVHAFAIVTINTAFIYVDKRKVSVEVQAHLVENEIEIREYTDVSSDVTLLATDELDTVSTVKRVNGGHQAEENSNLIWADSGSCCYALYAKLNPDTVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDVYGASGYFLEKDSVKKEKQLQSLKLTEVTVSDQLESFRASKEHFKGLSFPTISSVGPNAAIIHYSPKAEACAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPHARNVPLQSFMTVTDEPGYYEDGAFGIRLENVLIVKDADTKFNFGDKGYLSFEHITWAPYQAKLIDLKLLSPDEINWLNSYHSTCRDILAPYLDEVESAWLKKATEPIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIL8</accession>
    <name>V7CIL8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="24">Cysteine-rich receptor-like protein kinase 10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_002G049500g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIL8"/>
    <dbReference type="Gramene" id="ESW29178">
        <property type="protein sequence ID" value="ESW29178"/>
        <property type="gene ID" value="PHAVU_002G049500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWDY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYHISYA"/>
    <dbReference type="OrthoDB" id="688481at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000129">
        <property type="entry name" value="cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000142">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000012">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000013">
        <property type="entry name" value="Cysteine-rich RLK (RECEPTOR-like protein kinase) 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF1050">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 17" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 17" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-0675">Receptor</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="334"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="81"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="189"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="394"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="18">
        <location>
            <begin position="303"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="18">
        <location>
            <begin position="305"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="422"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW29178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="24">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="719" mass="79379" checksum="19E8D106808A0D87" modified="2014-02-19" version="1">MFLYYTHVRLSHLLYISSQHEAQVSPKSQGDSTQTAKRVMRGEREMVTDVSMASLKLLLLLFILSFLHFNTCKAQELNSDPVYLYHNCSGGNTTANSAYQLNLGTLLTSLSSNASTEFSNNTVGTSSSDRVYGLFMCRGDVPSTLCHQCVLNATRRLRSDCSLAKQAVIWYDECTVRYSNISFFSTVATRPRVGLLNTGNISNPEAFMTLLFSTINTTADEAANFHMGVKKYATNQANFSGFQTLYCLAQCTPDLSPGDCRNCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRATATPSPSPSPSPPLLPPPTSGNSRGGGGISAGTIVAIVVPISVAVLLFIVGICFLSRRARKKASAKEGKNVDDITTLESLQFGFGTIEAATNNFSADNKLGEGGFGEVFKGTLPSGQVIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQSELDWRRRYKIIQGTARGTQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTDRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWLLWKDGTPLELMDPILRESYNQNEIIRSIHIGLLCVQEDPEDRPTMATIVLMLDSNTVTLPTPKRPAFFIHSGTDATMPKGQQFDQSITKSLPMSINDVSISEMDPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJQ3</accession>
    <name>V7CJQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G077700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJQ3"/>
    <dbReference type="SMR" id="V7CJQ3"/>
    <dbReference type="STRING" id="3885.V7CJQ3"/>
    <dbReference type="Gramene" id="ESW29525">
        <property type="protein sequence ID" value="ESW29525"/>
        <property type="gene ID" value="PHAVU_002G077700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0947">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRGCDKA"/>
    <dbReference type="OrthoDB" id="64767at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055087">
        <property type="term" value="C:Ski complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070478">
        <property type="term" value="P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18795">
        <property type="entry name" value="SF2_C_Ski2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000190">
        <property type="entry name" value="ATP-dependent RNA helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3380.30:FF:000007">
        <property type="entry name" value="DExH-box ATP-dependent RNA helicase DExH15 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3380.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050699">
        <property type="entry name" value="RNA-DNA_Helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057416">
        <property type="entry name" value="SH3_ISE2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012961">
        <property type="entry name" value="Ski2/MTR4_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131">
        <property type="entry name" value="ATP-DEPENDENT RNA AND DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12131:SF1">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08148">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25446">
        <property type="entry name" value="SH3_ISE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01142">
        <property type="entry name" value="DSHCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="156"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="414"/>
            <end position="613"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="62"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="656"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="896"/>
            <end position="963"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1165" mass="130681" checksum="8A87FAF9E211F2E8" modified="2014-02-19" version="1">MATNTHFILSLPPRYAFSISSSSFPFLPTNTTLSFSLLRLRSLPLSLNFRASFSFKSPTSTIRAFSDAEEDDEEEDDDEEEDEDEDDDVAADEYDDVSADAPDDDAGVFARHDGFKWQRVEKLCNEVREFGADIIDVDELVSVYDFRIDKFQRQAILAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGHGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKVVQLICLSATVANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSMKNSLLPLLDEKGTHMNRKLSFNYLQLQAAGAKAYKDDWSRKRNSRKRGSRFSYDSDDSMFEQRSLSKNDINAIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKKFRKLYPDAVRESSIRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDESGHVVLIQTTNEGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIQWSNESGNMKPSTGRTLEEARKLVEQSFGNYVSSNVMLAAKEELDKIEKEIKLLMLETTDEAVDRKTRKALAPRQYKEIAELLEDLRSEKRVRSKLRKQVEAKRMSALKPLLEEPESGHLPFLCLQYRDSEGVEYSIPAVFLGKVDSLDASKLKTMITSVDSFALNLAEVEPSVADSAARNKDLKPSYHVALGSDNTWYLFTEKWVKTVYGTGFPNVPLAQGDARPREIMSTLLDNGDMNWDKLSHSEHGGLWFMEGSLDTWSWSLNVPVLSSLSENDELLLKSQDYKDAIECYKDQRNKVARLKKKISRSEGYKEYFKILDAVKFVEEKIKRLKNRSKRLINRIEQIEPSGWKEFMQISNVIHEIRALDINTHVIFPLGETAGAIRGENELWLAMVLRNKILLDLKPPQLAAVCASLVSVGIKVRPWKNNSYIYEPSATVTKFITLLDEQRNALLALQDKHGVTITCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDILVQIPKLPDIDPLLQRNAKAASAVMDRPPISELVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMU0</accession>
    <name>V7CMU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CAAX prenyl protease 2/Lysostaphin resistance protein A-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G171700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMU0"/>
    <dbReference type="STRING" id="3885.V7CMU0"/>
    <dbReference type="Gramene" id="ESW30653">
        <property type="protein sequence ID" value="ESW30653"/>
        <property type="gene ID" value="PHAVU_002G171700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTD5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVPWNWQ"/>
    <dbReference type="OrthoDB" id="548974at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004175">
        <property type="term" value="F:endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080120">
        <property type="term" value="P:CAAX-box protein maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1/LyrA-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43592">
        <property type="entry name" value="CAAX AMINO TERMINAL PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43592:SF15">
        <property type="entry name" value="CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="257"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="305"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="CAAX prenyl protease 2/Lysostaphin resistance protein A-like" evidence="2">
        <location>
            <begin position="228"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="36728" checksum="643241794326A494" modified="2014-02-19" version="1">MLSNSMLLASSLFSPLPSTLICPHKLCSSFKTISKQSHAFLHKNPFLSHHLNLGSKRALSSVCFFNAGDKESELEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLTEAIALPYLGIKPDVLSLDDKAEILLLDQGMTTAVVLGIIYSVANTFQPLPEDFFKYDTREPFNLQKGWLLWAGVGLVGAIIAIALTGVAVSFFSGETPQRETDALVRLLPLIGSSNLSTACLVGITGVLAPLLEETVFRGFFMTSLTKWVPTPVAVVISASVFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHAFWNSGVILFLTFLQLQGYDIRELLQAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPX1</accession>
    <name>V7CPX1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S ribosomal protein L31</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G305600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPX1"/>
    <dbReference type="SMR" id="V7CPX1"/>
    <dbReference type="STRING" id="3885.V7CPX1"/>
    <dbReference type="Gramene" id="ESW32246">
        <property type="protein sequence ID" value="ESW32246"/>
        <property type="gene ID" value="PHAVU_002G305600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32247">
        <property type="protein sequence ID" value="ESW32247"/>
        <property type="gene ID" value="PHAVU_002G305600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0893">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVWKQGI"/>
    <dbReference type="OrthoDB" id="9739313at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00463">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.440.10:FF:000001">
        <property type="entry name" value="60S ribosomal protein L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000054">
        <property type="entry name" value="Ribosomal_eL31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020052">
        <property type="entry name" value="Ribosomal_eL31_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023621">
        <property type="entry name" value="Ribosomal_eL31_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10956">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10956:SF33">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01198">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01380">
        <property type="entry name" value="Ribosomal_L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54575">
        <property type="entry name" value="Ribosomal protein L31e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01144">
        <property type="entry name" value="RIBOSOMAL_L31E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="120" mass="13917" checksum="6FE98BF616365EDF" modified="2014-02-19" version="1">MVEKAKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRGVPRRIRVRIARKRNDDEDAKEELFSLVTVVEIPKEDLKGLGTKVIDEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQ43</accession>
    <name>V7CQ43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G303300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQ43"/>
    <dbReference type="SMR" id="V7CQ43"/>
    <dbReference type="STRING" id="3885.V7CQ43"/>
    <dbReference type="Gramene" id="ESW32217">
        <property type="protein sequence ID" value="ESW32217"/>
        <property type="gene ID" value="PHAVU_002G303300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32218">
        <property type="protein sequence ID" value="ESW32218"/>
        <property type="gene ID" value="PHAVU_002G303300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32219">
        <property type="protein sequence ID" value="ESW32219"/>
        <property type="gene ID" value="PHAVU_002G303300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS88">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAMLEPK"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204:SF1">
        <property type="entry name" value="ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="3">
        <location>
            <begin position="44"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="292" mass="31995" checksum="A136B3D96422C2A2" modified="2014-02-19" version="1">MALSLPTHCSPSLVPLPPSTKPTFPTLRRFNHRVCVAAASTPLLQVNDLRAKIVESNVEILHGVNLTVNQGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVAFKGENLLEMEPEERSLSGLFMSFQSPVEIPGVSNDEFLVMAYNARRKKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNRILTPQNSLLMITHYRRILDLLNPTHVHVMDKGKIARTGDLSMVEAIEAEGYETVSTLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRH8</accession>
    <name>V7CRH8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G011400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the AAA ATPase family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW32714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="AlphaFoldDB" id="V7CRH8"/>
    <dbReference type="SMR" id="V7CRH8"/>
    <dbReference type="STRING" id="3885.V7CRH8"/>
    <dbReference type="Gramene" id="ESW32714">
        <property type="protein sequence ID" value="ESW32714"/>
        <property type="gene ID" value="PHAVU_001G011400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0651">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YSIMHIL"/>
    <dbReference type="OrthoDB" id="1937997at2759"/>
    <dbReference type="PhylomeDB" id="V7CRH8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000008">
        <property type="entry name" value="26S protease regulatory subunit 10B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000027">
        <property type="entry name" value="26S protease regulatory subunit 10B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000034">
        <property type="entry name" value="26S protease regulatory subunit 10B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050221">
        <property type="entry name" value="26S_Proteasome_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032501">
        <property type="entry name" value="Prot_ATP_ID_OB_2nd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23073">
        <property type="entry name" value="26S PROTEASOME REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16450">
        <property type="entry name" value="Prot_ATP_ID_OB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-0647">Proteasome</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="13">
        <location>
            <begin position="171"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="24"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00061931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW32714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="398" mass="44541" checksum="4EF6563ADAF36F77" modified="2014-02-19" version="1">MTDTEDATRRRNAVAEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKTKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMVHEDPGNISYSAVGGLSDQIRELRESIELPLINPEIFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFSYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYSADFGKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRM6</accession>
    <name>V7CRM6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G015400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRM6"/>
    <dbReference type="STRING" id="3885.V7CRM6"/>
    <dbReference type="Gramene" id="ESW32764">
        <property type="protein sequence ID" value="ESW32764"/>
        <property type="gene ID" value="PHAVU_001G015400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TQYYGRV"/>
    <dbReference type="OrthoDB" id="2018951at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045288">
        <property type="entry name" value="At1g75140-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35464">
        <property type="entry name" value="OS06G0115200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35464:SF1">
        <property type="entry name" value="OS06G0115200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756081" evidence="3">
        <location>
            <begin position="26"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="500"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="538"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="575"/>
            <end position="588"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="651" mass="72292" checksum="0A141A644C02C416" modified="2014-02-19" version="1">MASLEKGKFFIFLLLCFFSSLHVSSTPLDHKSCSVESKLDPDSCQEPVPEPPQTANHLNQQVLLDKLEELVRNLSDLVARLESKLPDPPKEKGRFTQRKGGDDGDGGTISSSKRVEDEEFEGKFRDGERAKGMSVTKYTPFWSERFQFASAVKLDSEVTCIIVLPSRDHEGLSKYVAVSDEKGRVYVFMRNGDVLVEFDTLVESSITAMVSYTSVYKNESFVVTGHQNGEILLHRVWEGGSSGEDYSSLFMENVGKFVSPETPENGRPVTLLEVHYVGRMKYIISADASGKIKVFKENGSLYGSVMASSRPLAFLKQRLMFLTETGAGSLDLRGMKIRESECEGLNHSVARTYVFDAMERSKAYGFTSDGEMIYVLLLGDVMNFKCRVRYKKRFDMDEPLALQAIKGYLLIVNPEKVFVYNVSSPHYVRVGVPRLVFSPSLDELRSSFLNNPIPGLDAETRVIPLIGTDREKLVVVGLGGGYVGMYHSNLPIFKGEFNTMLWTSPVVFFVLFLFGAWHFFAKKKEALTSWGPDDPFTSTSATTNAPLASASAERSFGDSSSRSTEVMDLRSGALRAPPRRYGSPSRYPGAAAASSYRLGASTDHNARPASVDPDFRGASELKYRATTMDPPGFPKRRDGMFVANQVVNDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSH3</accession>
    <name>V7CSH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G301800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Membrane</location>
            <topology evidence="10">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSH3"/>
    <dbReference type="STRING" id="3885.V7CSH3"/>
    <dbReference type="Gramene" id="ESW32199">
        <property type="protein sequence ID" value="ESW32199"/>
        <property type="gene ID" value="PHAVU_002G301800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32200">
        <property type="protein sequence ID" value="ESW32200"/>
        <property type="gene ID" value="PHAVU_002G301800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRZJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THYKGWE"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000123">
        <property type="entry name" value="Putative methyltransferase PMT15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108:SF1058">
        <property type="entry name" value="METHYLTRANSFERASE PMT18-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW32200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="627" mass="71805" checksum="97018896746F39AB" modified="2014-02-19" version="1">MGKDGSPKHHSPFDSKRNRLTWILGVSGLCILSYIMGAWRNTPSPNSQSEIYSKVDCNVASNSPGMASSAVQSSTNLDFASHHQIDINNSGGTQEFPPCNISLSEYTPCQDRDRGRRYDRNMLKYRERHCPSKEEQLYCLIPAPPKYKPPFKWPQSRDYAWYNNIPHKELSIEKAIQNWIQVEGDRFRFPGGGTMFPRGADAYIDDINELIPLTTGTIRTAIDTGCGVASWGAYLLKRDIIAMSFAPRDTHEAQVQFALERGVPAMIGVMASQRTPYPARAFDMAHCSRCLIPWEKNDGLYLIEVDRILRPGGYWILSGPPIRWKTYWRGWERTQEDLKQEQDNIEDMAKRVCWTKVIEKGDLSIWQKPRNHVGCAQTKQIYKTPHICQSDNADRAWYQELEKCITPLPEVRSPEQVAGGAVEKWPQRAFAVPPRISSGSIPNVNEEKFQKDNEIWKERIVHYKHLVPLTQGKYRNVMDMNAYLGGFAAALTKYPVWVMNVVPSNSNHDTLGAIFERGFIGTYQDWCEAFSTYPRTYDLIHAANVFSIYQDRCNITLILLEMDRILRPEGTAIFRDTVELLVKIKSITDAMRWKSSIMDHESGPFNPEKILVAEKTYWTAEVKEKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSU2</accession>
    <name>V7CSU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">General transcription and DNA repair factor IIH subunit TFB5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G322200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Component of the 7-subunit TFIIH core complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TFB5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSU2"/>
    <dbReference type="SMR" id="V7CSU2"/>
    <dbReference type="STRING" id="3885.V7CSU2"/>
    <dbReference type="Gramene" id="ESW32433">
        <property type="protein sequence ID" value="ESW32433"/>
        <property type="gene ID" value="PHAVU_002G322200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3451">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FACLWPC"/>
    <dbReference type="OrthoDB" id="354at2759"/>
    <dbReference type="PhylomeDB" id="V7CSU2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000439">
        <property type="term" value="C:transcription factor TFIIH core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005675">
        <property type="term" value="C:transcription factor TFIIH holo complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006294">
        <property type="term" value="P:nucleotide-excision repair, preincision complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006367">
        <property type="term" value="P:transcription initiation at RNA polymerase II promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1220:FF:000003">
        <property type="entry name" value="General transcription and DNA repair factor IIH subunit TFB5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1220">
        <property type="entry name" value="TFB5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035935">
        <property type="entry name" value="TFB5-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009400">
        <property type="entry name" value="TFIIH_TTDA/Tfb5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28580">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28580:SF1">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06331">
        <property type="entry name" value="Tfb5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01395">
        <property type="entry name" value="Tbf5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142897">
        <property type="entry name" value="TFB5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU368032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW32433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="70" mass="7999" checksum="A792EACC0D9684E4" modified="2014-02-19" version="1">MVNATKGIFISCDVPMAQYIINMNASMPASDKFIIHVLDSTHMFVQPHVELMIRSQIAKFREDNTYVKPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTJ8</accession>
    <name>V7CTJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_001G076000g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTJ8"/>
    <dbReference type="SMR" id="V7CTJ8"/>
    <dbReference type="STRING" id="3885.V7CTJ8"/>
    <dbReference type="Gramene" id="ESW33512">
        <property type="protein sequence ID" value="ESW33512"/>
        <property type="gene ID" value="PHAVU_001G076000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPX7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CFIVNHY"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7CTJ8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31235">
        <property type="entry name" value="PEROXIDASE 25-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 18" id="KW-0349">Heme</keyword>
    <keyword evidence="18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="7 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="18" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="29"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="232"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="39"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="72"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="126"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="205"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW33512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="331" mass="35524" checksum="6F16E9B4549A97F2" modified="2014-02-19" version="1">MDIDTPRFLQTISSLVLILVSVSSLASASLKVGFYTSTCPSAEEIVRSAVNKGISENSGIAAGLIRMHFHDCFVRGCEGSVLLASTPGNPIAERDHFANNPSLRGFEVIEEAKIQLEAACPGTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIADEVAQNLPAPTSNVDELVSRFEQKGLSADEMVTLSGAHSIGVSHCSTFSKRLYSFNDTFKQDPSMDSSYAETLKTKCPAPPPTSDPTLSLDPSTPVRLDNKYYEGLINHRGLLTSDQTLFTTQSTREMVVSNADNGANWSEKFAKAMVQMGSIEVLTGSSGEIRKHCSFVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUJ7</accession>
    <name>V7CUJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Chromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G0001001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUJ7"/>
    <dbReference type="Gramene" id="ESW32576">
        <property type="protein sequence ID" value="ESW32576"/>
        <property type="gene ID" value="PHAVU_001G0001001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1376771at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023780">
        <property type="entry name" value="Chromo_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00385">
        <property type="entry name" value="Chromo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chromo" evidence="1">
        <location>
            <begin position="8"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="116" mass="12853" checksum="4FB8E221788A0F5D" modified="2014-02-19" version="1" fragment="single">VDEKEPVAPEAILATREEQRNGKTISEWLIHWKAQPVEKATWEAAETIKEKFPSFCLEDKAETSEGGLDGNSLPIVLAQPTSEKPLLVYSRRSKAHVPETSTTFQESLLGKGGSYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVJ2</accession>
    <name>V7CVJ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="27">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_001G066300g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="19">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVJ2"/>
    <dbReference type="SMR" id="V7CVJ2"/>
    <dbReference type="STRING" id="3885.V7CVJ2"/>
    <dbReference type="Gramene" id="ESW33403">
        <property type="protein sequence ID" value="ESW33403"/>
        <property type="gene ID" value="PHAVU_001G066300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQPF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LQMGILD"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007166">
        <property type="term" value="P:cell surface receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.25.10:FF:000038">
        <property type="entry name" value="Fibrillin 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000084">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000043">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.10">
        <property type="entry name" value="Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024731">
        <property type="entry name" value="NELL2-like_EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045274">
        <property type="entry name" value="WAK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005:SF470">
        <property type="entry name" value="ASSOCIATED KINASE-LIKE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005">
        <property type="entry name" value="WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12947">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00181">
        <property type="entry name" value="EGF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57196">
        <property type="entry name" value="EGF/Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 19" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="13 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 22" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 21" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="22">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004758158" description="Protein kinase domain-containing protein" evidence="22">
        <location>
            <begin position="28"/>
            <end position="728"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="325"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="24">
        <location>
            <begin position="270"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="23">
        <location>
            <begin position="397"/>
            <end position="679"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="426"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00058961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW33403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="27">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="728" mass="81429" checksum="95B3905C562C5E0A" modified="2014-02-19" version="1">MRIKETQKHLTRLTVMLLMALAAASQALPGCQDSCGSVSSIPYPFGIGNSSVTGHNCFQEKELELTCRNSTLYRGQGNAQIINISLAGKIDMLMFISKVCKNESQGNRPSLRSPAFTISSEDNKFVSVGCDTYGYLNSFRNGTTSSTGCLTRRDSLESVESMQKRKLYGHRLQQFQFHFRFQQVWILLCGKNGNYSFSVDHLKGINFTMAPMVMEWSVGNDTCDASMHTADYACKSDNSYCQNSPYEYGYRCQCNPDFEGNPYLLHGCQDIPECARNQHNCDSEDHCRETSGSFECFCPDGLIGNGTKEGGGCHTKQPHDPFNKIIIGAGVGLIALFIGVSWLYLMYQKRKVLKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIVGKGGFGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFHYLHKQGEVVNVSWKMCLRIATETAAALSYLHSVASIPIIHRDVKTSNILLDETYNAKVSDFGASRLVPLEQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFDRSEEKRSLTVHFLCSLKEDRLIDVLQMGILDEENRQEVVEVAILAARCLRLTGEERPSMKEVAIELEGIKLTEKHPSIKTGRNFEVGQYLLHKTQSSREHGDSSSSQQNTGYDSLRALELIEFGNGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CY91</accession>
    <name>V7CY91_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G136700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the WIP C2H2-type zinc-finger protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CY91"/>
    <dbReference type="STRING" id="3885.V7CY91"/>
    <dbReference type="Gramene" id="ESW34245">
        <property type="protein sequence ID" value="ESW34245"/>
        <property type="gene ID" value="PHAVU_001G136700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNDHESM"/>
    <dbReference type="OrthoDB" id="6077919at2759"/>
    <dbReference type="PhylomeDB" id="V7CY91"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:000523">
        <property type="entry name" value="Zinc finger protein WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055187">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043584">
        <property type="entry name" value="WIP1/2/3/4/5/6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059161">
        <property type="entry name" value="Znf-C2H2_STOP1/2_3rd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45878">
        <property type="entry name" value="ZINC FINGER PROTEIN WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45878:SF1">
        <property type="entry name" value="ZINC FINGER PROTEIN WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22995">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23115">
        <property type="entry name" value="zf-C2H2_STOP2_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="12">
        <location>
            <begin position="185"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="12">
        <location>
            <begin position="269"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="133"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW34245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="347" mass="39187" checksum="4F4F9C175EE906DB" modified="2014-02-19" version="1">MADPYSNFFSSSPFFRFNHHFPSSNPSPHAPYVHNFINHSKTNDTTFFQYHHHNHTSSTTTTFSSFPPSPPLREELPLLRLSPAKQEEEEEDLSCTGAMDVEERIHIHPKEEEDDEDGTVTVALHIGLPSPSAAEMASVLSSSSETTDKDHGDGAAEDSSAGFRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPASEVEQDNDDSTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2B7</accession>
    <name>V7D2B7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G229200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2B7"/>
    <dbReference type="SMR" id="V7D2B7"/>
    <dbReference type="STRING" id="3885.V7D2B7"/>
    <dbReference type="MEROPS" id="A01.074"/>
    <dbReference type="Gramene" id="ESW35366">
        <property type="protein sequence ID" value="ESW35366"/>
        <property type="gene ID" value="PHAVU_001G229200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCVGIAN"/>
    <dbReference type="OrthoDB" id="771136at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05476">
        <property type="entry name" value="pepsin_A_like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000105">
        <property type="entry name" value="aspartic proteinase PCS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000090">
        <property type="entry name" value="Aspartyl protease family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034161">
        <property type="entry name" value="Pepsin-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051708">
        <property type="entry name" value="Plant_Aspart_Prot_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967:SF31">
        <property type="entry name" value="ASPARTYL PROTEASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967">
        <property type="entry name" value="OS07G0603500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756783" description="Peptidase A1 domain-containing protein" evidence="6">
        <location>
            <begin position="23"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="7">
        <location>
            <begin position="86"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW35366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="446" mass="49389" checksum="D3FE86C707AE885B" modified="2014-02-19" version="1">MPPLFFFFFFLFLSLLFSPLLSLQLNHTSFSLSFPLTSLPLSTNTASKMLRDSLIAYSNRTTNHTRLTSPSSPYNYRLTFKYSMVLIVNLPIGTPPQVQPMLLDTGSQLSWIQCHRKPPKVPPPTASFDPSLSSTFSILPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRETRPGSTSSGSFYLGHNPNSLRFKFVQMLTFTQSQRMPNLDPLAYTVALLGIRIGGRKLNISPAVFRADAGGSGQTMIDSGSDFTYLVNEAYDKVRAQVVRAVGPRMKKDYVYSGVADMCFDGNAVEIGRLIGDMVFEFEKGVEIVIPKERVLASVEGGVHCVGIGNSDKLGAASNIIGNFHQQNLWVEFDLVNRRVGFGAADCSRLAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2H8</accession>
    <name>V7D2H8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">phosphoribosylformylglycinamidine synthase</fullName>
            <ecNumber evidence="3">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Formylglycinamide ribonucleotide amidotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Formylglycinamide ribotide amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_001G234500g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide + L-glutamine + ATP + H2O = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + L-glutamate + ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the FGAMS family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7D2H8"/>
    <dbReference type="STRING" id="3885.V7D2H8"/>
    <dbReference type="Gramene" id="ESW35431">
        <property type="protein sequence ID" value="ESW35431"/>
        <property type="gene ID" value="PHAVU_001G234500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVIHYYR"/>
    <dbReference type="OrthoDB" id="6666987at2759"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01740">
        <property type="entry name" value="GATase1_FGAR_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02203">
        <property type="entry name" value="PurL_repeat1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02204">
        <property type="entry name" value="PurL_repeat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.10:FF:000007">
        <property type="entry name" value="Phosphoribosylformylglycinamidine synthase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.880:FF:000014">
        <property type="entry name" value="Phosphoribosylformylglycinamidine synthase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.650.10:FF:000006">
        <property type="entry name" value="Phosphoribosylformylglycinamidine synthase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.10:FF:000009">
        <property type="entry name" value="Probable phosphoribosylformylglycinamidine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.650.10:FF:000017">
        <property type="entry name" value="Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.750:FF:000001">
        <property type="entry name" value="Putative phosphoribosylformylglycinamidine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.750">
        <property type="entry name" value="Phosphoribosylformylglycinamidine synthase, linker domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="entry name" value="PurM-like C-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="entry name" value="PurM-like, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00419">
        <property type="entry name" value="PurL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040707">
        <property type="entry name" value="FGAR-AT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055181">
        <property type="entry name" value="FGAR-AT_PurM_N-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010073">
        <property type="entry name" value="PurL_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041609">
        <property type="entry name" value="PurL_linker"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036604">
        <property type="entry name" value="PurS-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01735">
        <property type="entry name" value="FGAM_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003672">
        <property type="entry name" value="PRK05297.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10099">
        <property type="entry name" value="PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10099:SF1">
        <property type="entry name" value="PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18072">
        <property type="entry name" value="FGAR-AT_linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18076">
        <property type="entry name" value="FGAR-AT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22689">
        <property type="entry name" value="FGAR-AT_PurM_N-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13507">
        <property type="entry name" value="GATase_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01211">
        <property type="entry name" value="GATase_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="Class I glutamine amidotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109736">
        <property type="entry name" value="FGAM synthase PurL, linker domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="PurM C-terminal domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="PurM N-terminal domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82697">
        <property type="entry name" value="PurS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51273">
        <property type="entry name" value="GATASE_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phosphoribosylformylglycinamidine synthase N-terminal" evidence="16">
        <location>
            <begin position="117"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphoribosylformylglycinamidine synthase linker" evidence="15">
        <location>
            <begin position="262"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="PurM-like C-terminal" evidence="14">
        <location>
            <begin position="525"/>
            <end position="679"/>
        </location>
    </feature>
    <feature type="domain" description="FGAR-AT PurM N-terminal-like" evidence="17">
        <location>
            <begin position="750"/>
            <end position="902"/>
        </location>
    </feature>
    <feature type="domain" description="PurM-like C-terminal" evidence="14">
        <location>
            <begin position="934"/>
            <end position="1064"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00032632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00052585"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF18072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF18076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF22689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW35431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1402" mass="154271" checksum="502BFBB0B2EB7604" modified="2014-02-19" version="1">MAAVTEFGVSQLLQGTSRQTLFLKKKPQKHRSHMLWGTLWNRNWALGSTRRALSLRCHAQENPRAVVEEQPGLVEMPASEVVHLFRVPFMQKSAAAELLKDAQVKICSQIVEIQTEQCYNVGLSSQLSSEKISVLKWLLEETFEPENLGNESFLEKKRKEGLTPVIVEVGPRLSFTTAWSTNAVAICHACGLTEVTRLERSRRYLLFTTSALQDNQINEFAFMVHDRMTECVYSQKLTSFETSIVPEEIRYIPVMERGRKALEEINLEMGFAFDDQDLEFYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGNIFIDGQLMNKTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSSCPLEIAVSELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTSGFYAPWEDPSFTYPSNLAPPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICSREKVSMAVIGTISGDGRVVLVDRLATQQCISNGLPPPPPAVDLELEKVLGNMPKKSFHFNRVVYEREPLDIAPGITVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAAISLSEAMIELGIAIDGGKDSLSMAAHSDGEVVKAPGNLVISVYVTCADITKTVTPDLKLKDEGVLLHIDLSKGQRRLGGSAFAQAFDQVGDECPDLDDVPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGLNLDMTSQGNSLFQTLYAEELGLVLEVSKKNLTLVMDKLINVGVSAEIIGQVTASPSIEVKVDGEVFLTEKTSTLRDMWEETSFQLERFQRLASCVDMEKEGLKHRYEPSWDLTYLPVFTEEKFLSATVKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNRKTSLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEHVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQIGGVHGAGGDLSQPRFIHNASGRFECRFTSVTILPSPAMMFRGMEGSTMGIWAAHGEGRAYFPDEGVFDRIVHSELAPVRYCDDAGNPTEAYPFNVNGSPLGAAAICSPDGRHLAMMPHPERCFLMWQFPWYPKHWHVEKNGPSPWLRMFQNAREWCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1F6</accession>
    <name>A0ACC3P1F6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L006601</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967756">
        <property type="protein sequence ID" value="KAK6646200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="26995" checksum="9A3D47D9B4E07542" modified="2026-01-28" version="1">MATTRRYEFGMNEASHPDSMRATMAEFFSTCIFVFVGEGSVLALNHIYKEPGSSATELVVVAVAHAFALFAAISISAHVSGGHVNPAVTFGALLGGRISVLKALYYWIAQILGSIVAALLLRLVTNNMRPEGFGLSSGVGAVHGLILEISLTFGLMYTVYATAIDPKRGAISTIAPLAIALVVGANILAGGPFDGACMNPARAFGPALVGWRWQYHWIFWVGPLLGAALAAVLYEFVLVPIEPPHHQPLPAEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEG1</accession>
    <name>V7AEG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PGG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G029900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEG1"/>
    <dbReference type="SMR" id="V7AEG1"/>
    <dbReference type="STRING" id="3885.V7AEG1"/>
    <dbReference type="Gramene" id="ESW03630">
        <property type="protein sequence ID" value="ESW03630"/>
        <property type="gene ID" value="PHAVU_011G029900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1923662at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.20:FF:000692">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026961">
        <property type="entry name" value="PGG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24177">
        <property type="entry name" value="CASKIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24177:SF215">
        <property type="entry name" value="PGG DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13962">
        <property type="entry name" value="PGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="569"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="614"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="644"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="domain" description="PGG" evidence="3">
        <location>
            <begin position="522"/>
            <end position="633"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW03630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="708" mass="81202" checksum="283751A350A54C8F" modified="2014-02-19" version="1">MVEGEVSMFDETTVRAQRAARGGNWRMFKKILEGDKKSLVGAFDLFGNTAIHIATRSNNPGLLRELLEMLSEEERWHALRKGNCVNNTLLHEIVFCTRVEMAGVVLEFENEAAPEEVAEEKKRVPLVEIVNDSGETPLFRAAKLGRLKMLKYMAKHAHGDIRRLFVRYDKHSILHASILGQFFDVSIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQTPSMGTLKTLIYYLLPEEGYGSHDDGENASADFRHQRSDIESGQQDKAKFPSSVLSRINHAIWRTLAKEFDGIGRIWKLKKQHKLAEHLSEMLVQRDFSWQNSFHENFQPLIVLPVLSSKSDRIKHIHHMKEMHKTNSEMSRSRSYRAITTSTSIPHSKNYTPLLMAAGSGIVEIVGKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNLLKKHSAFKSLTFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKEIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVSVLVATVVFAAAYTIPGGTNQNNGTPVFLGSRVFLFFTVTDVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFASLFFSLVCTMLTFSATVLLTIQLENHQKWASVLFCCGVFFPVAIFWRMQFPLYKMLQRLAKRLLKTLREAVPTTFVKYSRKRARTRNYNIITE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFI0</accession>
    <name>V7AFI0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Ribosomal RNA small subunit methyltransferase NEP1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G027300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase NEP1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFI0"/>
    <dbReference type="SMR" id="V7AFI0"/>
    <dbReference type="STRING" id="3885.V7AFI0"/>
    <dbReference type="Gramene" id="ESW03598">
        <property type="protein sequence ID" value="ESW03598"/>
        <property type="gene ID" value="PHAVU_011G027300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3073">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VHNTFEL"/>
    <dbReference type="OrthoDB" id="269804at2759"/>
    <dbReference type="PhylomeDB" id="V7AFI0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070037">
        <property type="term" value="F:rRNA (pseudouridine) methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18088">
        <property type="entry name" value="Nep1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1280.10:FF:000003">
        <property type="entry name" value="Ribosomal RNA small subunit methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005304">
        <property type="entry name" value="Rbsml_bgen_MeTrfase_EMG1/NEP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12636">
        <property type="entry name" value="NEP1/MRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12636:SF5">
        <property type="entry name" value="RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE NEP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03587">
        <property type="entry name" value="EMG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="alpha/beta knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="33"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW03598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="287" mass="32264" checksum="69F6BE68AE19783C" modified="2014-02-19" version="1">MTRPFGVKGKKRKHSQSKQYSEEEHQQPPPKKAVAEESKEPSPEPSPEPEPERESEPAPTEEDELSGIPIVPSEKNSTKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLPVNSRKIGLSYSSENLVDMDDYVSTISSNTDLVFVVGAMAHGKIETDYTEDYLAISGYPLSAAYCITRITGALERKWKIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHK2</accession>
    <name>V7AHK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="6">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_011G119200g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the leguminous lectin family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the N-terminal section; belongs to the leguminous lectin family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="6"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHK2"/>
    <dbReference type="SMR" id="V7AHK2"/>
    <dbReference type="Gramene" id="ESW04715">
        <property type="protein sequence ID" value="ESW04715"/>
        <property type="gene ID" value="PHAVU_011G119200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRZ3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHEDSML"/>
    <dbReference type="OrthoDB" id="1409653at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06899">
        <property type="entry name" value="lectin_legume_LecRK_Arcelin_ConA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000086">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase S.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001023">
        <property type="entry name" value="Os07g0541700 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000621">
        <property type="entry name" value="Putative L-type lectin-domain containing receptor kinase VII.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050528">
        <property type="entry name" value="L-type_Lectin-RKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001220">
        <property type="entry name" value="Legume_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27007">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00139">
        <property type="entry name" value="Lectin_legB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 22" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="19" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0430">Lectin</keyword>
    <keyword evidence="17 23" id="KW-0472">Membrane</keyword>
    <keyword evidence="13 22" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-0675">Receptor</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="11 24" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 23" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="16 23" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="24">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753223" description="non-specific serine/threonine protein kinase" evidence="24">
        <location>
            <begin position="24"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="23">
        <location>
            <begin position="290"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="25">
        <location>
            <begin position="351"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="378"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW04715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="531" mass="59066" checksum="227AF480292B6097" modified="2014-02-19" version="1">MSKLLLSSLFLTTNLILLTSVSSTEFIYNTNFNSTNTLVCGNATIESSILTLTNRSTFAVGRAFYPSKIPTKSSNSSTPLPFATSFIFSIAPFKDLLPGHGFVFILSPSAGTTGVSSAQHLGLFNFTNNGDPNNHVFGIEFDVFNNQEFNDIDDNHVGVDINSLVSFTSRAAGFWGGKGGDKFEDLKLNNGENYQVWIEYLDSRVNVTMALAGQNRPKKPLISELVDLSEVLLDEMYVGFCGATGQLVESHKILAWSFSNSNVSIGDALVTTNLPSFVLPKESSFRSKGFLVGITAGVLFVIGSAVVIFVFFLRRKRCLRKEEEEDIEDWEQEYWPHRVRYEDIYAATKGFSDQNVIGFGGNGKVYKGLLQGVQVAVKIIPCDSEQGMRAFLSEISSLGRLKHRNVVLLRGWCKKEKGSLILIYDYMDNGSLDKRMFDGDENTIFGWEERMKVLKDVAHGILYLHDGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLATMHHHEQIGHTSQVIGTVGFMALLSYKVIFVIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHY3</accession>
    <name>V7AHY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Diacylglycerol kinase</fullName>
            <shortName evidence="11">DAG kinase</shortName>
            <ecNumber evidence="11">2.7.1.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G155800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack. May be involved in the accumulation of PA during cold stress.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10272"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.107"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the eukaryotic diacylglycerol kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.107" evidence="11"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHY3"/>
    <dbReference type="STRING" id="3885.V7AHY3"/>
    <dbReference type="Gramene" id="ESW05144">
        <property type="protein sequence ID" value="ESW05144"/>
        <property type="gene ID" value="PHAVU_011G155800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1169">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="242257at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004143">
        <property type="term" value="F:ATP-dependent diacylglycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007200">
        <property type="term" value="P:phospholipase C-activating G protein-coupled receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.200.40:FF:000007">
        <property type="entry name" value="diacylglycerol kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10330:FF:000016">
        <property type="entry name" value="Diacylglycerol kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="entry name" value="Probable inorganic polyphosphate/atp-NAD kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037607">
        <property type="entry name" value="DGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000756">
        <property type="entry name" value="Diacylglycerol_kin_accessory"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11255">
        <property type="entry name" value="DIACYLGLYCEROL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11255:SF29">
        <property type="entry name" value="DIACYLGLYCEROL KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00609">
        <property type="entry name" value="DAGK_acc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00045">
        <property type="entry name" value="DAGKa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00046">
        <property type="entry name" value="DAGKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="NAD kinase/diacylglycerol kinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0611">Plant defense</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="13">
        <location>
            <begin position="49"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="450"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="463"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00060336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW05144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="501" mass="56283" checksum="E53C5B93C1140A25" modified="2014-02-19" version="1">MAMRDGDYSRKSSWEIPMGDGSYDRTLREFCIPDYILVSGSERRNVSHVPACPVIVFINSKSGGQLGGELLVSYSTLLNKNQVFDLGKNAPDKVLQKLYATLETLKHNGDNFAAEIHNRLRIIVAGGDGTASWLLGVVSDLKLPHPPPIATVPLGTGNNLPFAFGWGKKNPTTDLQSVTSFLKDVRLANQMKIDSWHIVMRMKAPKEGSCDPIAPLELPHAMHAFHRVSSTDKLNMDGYHTYRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLYNQSAYLKLGCSQGWFFSSLFQSSRNIAQLAKVKIMKKGHWEDLHIPRSIRSIVCLNLPSFSGGLDPWGKPNRKKSIYRDLTLPYVDDGLFEVVGFRDAWHGLVLLAPNGHGTRLAQTSRIRFEFHKGAADCTFMRVDGEPWKQPLPKDDDTVVVEISHHGQVSMLATPLCRSKSMYDPSSPSVDREEDDSSDDELQEDWEERRKFGAADTFKYPDGIDIAQVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI63</accession>
    <name>V7AI63_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein yippee-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G163000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the yippee family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI63"/>
    <dbReference type="STRING" id="3885.V7AI63"/>
    <dbReference type="Gramene" id="ESW05229">
        <property type="protein sequence ID" value="ESW05229"/>
        <property type="gene ID" value="PHAVU_011G163000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3399">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHIESCV"/>
    <dbReference type="OrthoDB" id="6407410at2759"/>
    <dbReference type="PhylomeDB" id="V7AI63"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034751">
        <property type="entry name" value="Yippee"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004910">
        <property type="entry name" value="Yippee/Mis18/Cereblon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039058">
        <property type="entry name" value="Yippee_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13848">
        <property type="entry name" value="PROTEIN YIPPEE-LIKE CG15309-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03226">
        <property type="entry name" value="Yippee-Mis18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51792">
        <property type="entry name" value="YIPPEE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Yippee" evidence="5">
        <location>
            <begin position="12"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU110713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW05229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="129" mass="14626" checksum="520509B0FA3FE032" modified="2014-02-19" version="1">MGRIFTVELEGRSYGCKSCKTHLALADDLISRAFYCQRGKAYLFNNVVNFTIGVLEERMMLSGLHTVADIFCCCCGQIVGWKYESAHERSQKYKEGKFVLERGRIVDEIDFSAEFHIESCVSMSDAEDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ98</accession>
    <name>V7AJ98_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G0712001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ98"/>
    <dbReference type="STRING" id="3885.V7AJ98"/>
    <dbReference type="eggNOG" id="KOG2068">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SERDLYM"/>
    <dbReference type="OrthoDB" id="1923159at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030014">
        <property type="term" value="C:CCR4-NOT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004842">
        <property type="term" value="F:ubiquitin-protein transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd12438">
        <property type="entry name" value="RRM_CNOT4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000161">
        <property type="entry name" value="RNA binding (RRM/RBD/RNP motifs) family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034261">
        <property type="entry name" value="CNOT4_RRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039780">
        <property type="entry name" value="Mot2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12603">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12603:SF36">
        <property type="entry name" value="RNA BINDING (RRM_RBD_RNP MOTIFS) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="36"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="185"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="276"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="356"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="724"/>
            <end position="745"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="191"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="356"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW04156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="941" mass="102772" checksum="863461738171B021" modified="2014-02-19" version="1" fragment="single">LVNEVNMEKKMKTQKSKSKSSDGRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRREYFGQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITYAKEEEAIRCIQNVHGFVLEGRPLRACFGTTKYCHAWLRSVPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGATNNMQRRLGSVLPPPLDDNMNTTSPKPIVKNPSNNSVNTVRGSPPNGIYERHIPLPASAAWGTQATNCQPLAGGLSYPNGPSKPKPDTGSSSLAFFAAVTGSIQASDVTKRPPSSDGSHSMTTRVKNELLKPVKQYNNSADGLVSAGEKSPSSDVSPVPVNLNSQLSSLPLSRDSDGNCTTANTINSTNMTGQSCNSGPEEAMPSTNEEIPNLSIELSSINIDGNAEHCSITKPNSPPTDYVLIKSPEIQGSQYNDRFRDVITTNVAGIATPDNEVCNSREQCDWKLDSQSLVVSDAVEFDDDITSFDNQRLKDPEVVCRSYLPKSTGFLHVSNLSSPCLLQHGEGCTSVNAGSVSVDESILHASNILCNDHPEKLVSSSSYGLLNDERNGHSIQRLVEAVNAGHDVTMDKGESSIISNILSMDFDAWDDSLTSPHNLAKLLGDNTDNQSGPLNISSSWKVHSNNQSRFSFARQEESKIQMFDAHTSYGVNHQRSNNKVFQNFSERDLYMDKSGIANGFRTSNFEEAENMASGHFISSNKLSAISRAQVSAPPGFSIPSRPPPPGFSSNERVEQGFDSISGNSLLDHSSLLRNSYQSPSAGNLGGAGDIEYMDPAILAVGKGRLQGALNSPALDIRSNFMPQLNYFENDARLQLLMQRSLSPQQNHRFSEIGNTFSQLGDSYAVSSRLDQSQVSNLGPFQQLSMQQSANAVLSNGQWDGWNEVQSGNGLGVAELLRNERLGFNKFYSGYDDSKFRMPNSGDLYNRTFGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJF7</accession>
    <name>V7AJF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Albumin I chain a domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G203600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJF7"/>
    <dbReference type="SMR" id="V7AJF7"/>
    <dbReference type="Gramene" id="ESW05717">
        <property type="protein sequence ID" value="ESW05717"/>
        <property type="gene ID" value="PHAVU_011G203600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1388106at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032000">
        <property type="entry name" value="Albumin_I_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16720">
        <property type="entry name" value="Albumin_I_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0960">Knottin</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753782" description="Albumin I chain a domain-containing protein" evidence="3">
        <location>
            <begin position="28"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="Albumin I chain a" evidence="4">
        <location>
            <begin position="72"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="13748" checksum="3944E34459CF9AD0" modified="2014-02-19" version="1">MGYVRVAPLALFLLATSIMFSMKNIEAGECPKACSPNTRQPCGSSGCYCMPTLEGGVCLRGILPPVAKMIDEHPNLCKSHDECIKKGSGNFCAPYPNHYMDYGWCFTSDAEELKSFLVMPREISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="71" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJZ3</accession>
    <name>V7AJZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11 16">Ubiquitin carboxyl-terminal hydrolase</fullName>
            <ecNumber evidence="11 16">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_011G156100g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 11 16">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="11 16"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJZ3"/>
    <dbReference type="SMR" id="V7AJZ3"/>
    <dbReference type="STRING" id="3885.V7AJZ3"/>
    <dbReference type="Gramene" id="ESW05148">
        <property type="protein sequence ID" value="ESW05148"/>
        <property type="gene ID" value="PHAVU_011G156100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0944">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVPCEHT"/>
    <dbReference type="OrthoDB" id="361536at2759"/>
    <dbReference type="PhylomeDB" id="V7AJZ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007154">
        <property type="term" value="P:cell communication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0023052">
        <property type="term" value="P:signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02658">
        <property type="entry name" value="Peptidase_C19B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14295">
        <property type="entry name" value="UBA1_atUBP14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14388">
        <property type="entry name" value="UBA2_atUBP14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.10:FF:000086">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.10:FF:000103">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000026">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000371">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000099">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050185">
        <property type="entry name" value="Ub_carboxyl-term_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016652">
        <property type="entry name" value="Ubiquitinyl_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041432">
        <property type="entry name" value="UBP13_Znf-UBP_var"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001607">
        <property type="entry name" value="Znf_UBP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21646:SF10">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00627">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02148">
        <property type="entry name" value="zf-UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17807">
        <property type="entry name" value="zf-UBP_var"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016308">
        <property type="entry name" value="UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00290">
        <property type="entry name" value="ZnF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50271">
        <property type="entry name" value="ZF_UBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8 11 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 11 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 11 16" id="KW-0645">Protease</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="9 11 16" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="7 11 16" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10 11 13" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 15" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="UBP-type" evidence="19">
        <location>
            <begin position="161"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="USP" evidence="18">
        <location>
            <begin position="313"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="17">
        <location>
            <begin position="622"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="domain" description="UBA" evidence="17">
        <location>
            <begin position="684"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="12">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="772"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="14">
        <location>
            <begin position="181"/>
            <end position="770"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR016308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR016308-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR016308-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR016308-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU366025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW05148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="810" mass="90342" checksum="0679847CD11419CA" modified="2014-02-19" version="1">MTIEPLDLLRSNLARVRIPEPTNRIYKHECCVSFDSPRSEGGLFIDMCTFLAFGKDFVGWNYEKTGNPVYLHLKQTKKLVPEDRPSKKPTLLAIGIDGGFDNNEPEYEETHSVVILPEYVSLPFPSVELPEKVRLAVDAILLAEGAERKEELAAWTADKKHVSSYAMNIQQIDNGVVIPPCGWKCAKCDKTDNLWLNLSDGMILCGRKNWDGTGGNDHAVEHYRETGYPLAVKLGTVTADLEAADVFSYPEDESVLDPQLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVYPIFGPGYTGLVNIGNSCYMAANMQVVFSTRSFISRYYLSQSLKKAFEMSPADPTVDLNMQLTKLAHGLLSGKYSVPAFENDEKEKIVTSTTTAKQEGIRPRMFKSVIAASHPEFSSTRQQDALEFFLHFLDQVERANAGKTELDPSRSFKFGIEDRILCSSGKVTYNSRNDYILSLNIPLQEATNKEELESFHKLKQDKLAEGKEINADEIVRPRVPLETCLANFSAPEEIHDFYSTALKTKTTALKTAGLTSFPDYLVLHMRRFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGHQPGEELLPDGVPDEEDSNKMWANEEIVAQLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSHMDDPDIDLPISKGHGSETSTVVDQSKVDTLISFGFQEEIARKALVASGGDIEKATDWIFNNPNASVSSMDATPSNAASTSNDVNLPDGGGKYRLIGIVSHSGTSTLCGHYVAHVLKDGRWVIFNDNKVGASINPPKEMGYLYFFERF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKE9</accession>
    <name>V7AKE9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G016300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKE9"/>
    <dbReference type="SMR" id="V7AKE9"/>
    <dbReference type="STRING" id="3885.V7AKE9"/>
    <dbReference type="Gramene" id="ESW06057">
        <property type="protein sequence ID" value="ESW06057"/>
        <property type="gene ID" value="PHAVU_010G016300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUGK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNEILCH"/>
    <dbReference type="OrthoDB" id="1708403at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052426">
        <property type="entry name" value="Plant_dev_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45801">
        <property type="entry name" value="OS07G0101800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45801:SF94">
        <property type="entry name" value="ZINC FINGER PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="254"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="264"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="307" mass="34290" checksum="5BA449C273F934E9" modified="2014-02-19" version="1">MEQGQCWTKRKYSLSSSLSSPANPSYGDSWEEQAFAEDAANSLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPHNEILCHDLQTQLHKPLQSPFASLDDYLYPSPVCGLAYKKTKPNSYPDFVASPSSPSHSKALLAPSLNSGNSREETMIPFYDSTILHKISPVSNSSETWPNLAEDQGLYSCKFHPQADTKKPSKGIIDSRCWGSDDIDGDMSLNSVVYSTHPFLQFESTKEADHMSCMKRKTDASSSPFSPKSSSVDRNDVQPKMLEFSPSSLEELDLELRLGYRSKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKP9</accession>
    <name>V7AKP9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Proteasome subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G213400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="function">
        <text evidence="2">The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of peptide bonds with very broad specificity.</text>
            <dbReference type="EC" id="3.4.25.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Component of the proteasome complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the peptidase T1B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKP9"/>
    <dbReference type="SMR" id="V7AKP9"/>
    <dbReference type="STRING" id="3885.V7AKP9"/>
    <dbReference type="Gramene" id="ESW05834">
        <property type="protein sequence ID" value="ESW05834"/>
        <property type="gene ID" value="PHAVU_011G213400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05835">
        <property type="protein sequence ID" value="ESW05835"/>
        <property type="gene ID" value="PHAVU_011G213400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0173">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHIYCCG"/>
    <dbReference type="OrthoDB" id="429533at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004298">
        <property type="term" value="F:threonine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03763">
        <property type="entry name" value="proteasome_beta_type_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.10:FF:000005">
        <property type="entry name" value="Proteasome subunit beta type-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000243">
        <property type="entry name" value="Pept_T1A_subB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016050">
        <property type="entry name" value="Proteasome_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="METALLOPROTEASE TLDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194:SF4">
        <property type="entry name" value="PROTEASOME SUBUNIT BETA TYPE-7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00141">
        <property type="entry name" value="PROTEASOME"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00854">
        <property type="entry name" value="PROTEASOME_BETA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="8 11" id="KW-0647">Proteasome</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0888">Threonine protease</keyword>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR600243-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="271" mass="29404" checksum="FBF2F135DFAE528F" modified="2014-02-19" version="1">MSPSLDLPPKGGFNFDLCRRNAMLENKGLKAPTFLKTGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGIKIVVEAICAGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTYVNPKGFEFPKKIEVLLTKITPLKEKVEVIEGDAMEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALB4</accession>
    <name>V7ALB4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucose-induced degradation protein 4 homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G015600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GID4/VID24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALB4"/>
    <dbReference type="SMR" id="V7ALB4"/>
    <dbReference type="STRING" id="3885.V7ALB4"/>
    <dbReference type="Gramene" id="ESW06050">
        <property type="protein sequence ID" value="ESW06050"/>
        <property type="gene ID" value="PHAVU_010G015600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4635">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWSKFQC"/>
    <dbReference type="OrthoDB" id="62at2759"/>
    <dbReference type="PhylomeDB" id="V7ALB4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034657">
        <property type="term" value="C:GID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045721">
        <property type="term" value="P:negative regulation of gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043161">
        <property type="term" value="P:proteasome-mediated ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007039">
        <property type="term" value="P:protein catabolic process in the vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006623">
        <property type="term" value="P:protein targeting to vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018618">
        <property type="entry name" value="GID4/10-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14534:SF3">
        <property type="entry name" value="GID COMPLEX SUBUNIT 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14534">
        <property type="entry name" value="VACUOLAR IMPORT AND DEGRADATION PROTEIN 24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09783">
        <property type="entry name" value="Vac_ImportDeg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="12"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00061469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="214" mass="23699" checksum="A9BF4556DE4F8F68" modified="2014-02-19" version="1">MPVRVLENTAPSQVSGTNSGGSSSQTCSLLGVGQAFSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEATPEDDIRHWSKFPSFSPLLGQVEVDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYICFSCSDGSISGFYYDPNSSPYQKLELKSTNDGRSGFSFSSYELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMB0</accession>
    <name>V7AMB0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G071800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7AMB0"/>
    <dbReference type="Gramene" id="ESW06732">
        <property type="protein sequence ID" value="ESW06732"/>
        <property type="gene ID" value="PHAVU_010G071800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1906">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VNCCDSS"/>
    <dbReference type="OrthoDB" id="273917at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031499">
        <property type="term" value="C:TRAMP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990817">
        <property type="term" value="F:poly(A) RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043634">
        <property type="term" value="P:polyadenylation-dependent ncRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031123">
        <property type="term" value="P:RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="entry name" value="Beta Polymerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054708">
        <property type="entry name" value="MTPAP-like_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002058">
        <property type="entry name" value="PAP_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045862">
        <property type="entry name" value="Trf4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092:SF48">
        <property type="entry name" value="NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092">
        <property type="entry name" value="POLY(A) RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22600">
        <property type="entry name" value="MTPAP-like_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03828">
        <property type="entry name" value="PAP_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Poly(A) RNA polymerase mitochondrial-like central palm" evidence="5">
        <location>
            <begin position="1203"/>
            <end position="1299"/>
        </location>
    </feature>
    <feature type="domain" description="PAP-associated" evidence="4">
        <location>
            <begin position="1439"/>
            <end position="1492"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="407"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="976"/>
            <end position="1006"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1025"/>
            <end position="1081"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="421"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1025"/>
            <end position="1040"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF22600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW06732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1547" mass="171231" checksum="D8F4E81323AC2BF7" modified="2014-02-19" version="1">MAHHQLIDSLTSHISLYHSQSPNPNPNPNPNPRSSILKWFCSLSIHQRQAYLTVVDGNFVQILLQMLAKLRSHGHGSFILLPDLPSPNNLPTLCFKKSRGLIARVAESETTVRAVFESARLFESREGEEAANSLPPSARRLDALTLAEGFVGDVDQFVGAMDRISGGGFLRGEEAELGEDWVELHWLKAKGYYGIEAFIANRMEVSMRLAWLNRCGGRKRDVKLKEKMSASGVGVNVFWRKKGCVDWWGNLDAGTRRKVFTTFIMKAAKPLTRDVLEVSSSASDDEIWLYSVGVDKLMQHNGPISAQRIISVLPADMEFGTVLSPVTFCKKPAALARAFNSLLVLHEVNMIVTSNLNSEYDIGKLFFSSLGSVCTISDCILRKLRGFFMVISLDCTKLELLGEALDKSSSGKPKEKLSVSNRKKKGRNRKTKKQNPVSKTCTGDISHENPLKDTDCKGDNKKKTDLVGFRELPAVCMGKEIAMECSSSTVKMDHTQGLDVGTVKVRTTSKRSRKEKNKSKNIVVDSAGEKSHKSIMHAASTTVVSEGEVAICDRFLNSSTIQNVKNDNSIGNDIITSNSSLCSNLSGLTKENSSTGKVEGETEDLAETGNSLGPQYCLLSDERKTLCSGLGTFTCDLDCNAAITPPVPALKQGSFFGKEDTCHLNSLRVAKADIKSTAPDKPIREVNVKEFGLLNEHDRCLFESRNSAFSKCSPYEWPGVPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQARNPSIEGGCNPILSRPIPMSFDWPPVFRGGMTPSPNFKYDSGFISRKQCTFSKGLAVHSMQVDATAPDDERKKYSGDAWDLPDLTNTMELADEFDNHCLSEEEYEVHAVSGIDYNQYFGGGVMYWNPSDYPGKGFSRPPSLSSDDSLWALRDADMNRTVDDMVACTSSYSTNGLTSPTAAAFCSPFDPVGTGTQTVGYMMSGNEVPGKILHSPSVTDPAVDEDTSGSLGNSLPGEVEGKAGDSHPYPILRPIIIPNLSRERFDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRSGSSSPRHWGMRGWYHDGSNLEETCLRMDSAEVVWPWRSNNLAVRPLIQPLPAALLQDRLIALSQIARDQEHPDVTFPLQPPELQSCSAQSAALSVMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVENTAIPIIMLVVEVPQDVIVTTSAPMIQSLNEDPHRTPGEHGNDNNSDTIQLEDLGTQMKFDALKSKSVRLDISFKTPSHTGLQTTEMVKELTEQFPAATPLALVLKQFLSDRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELKFLSSDGESSSRPPYRLLPKIIPSLDTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMV5</accession>
    <name>V7AMV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G091000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMV5"/>
    <dbReference type="SMR" id="V7AMV5"/>
    <dbReference type="STRING" id="3885.V7AMV5"/>
    <dbReference type="Gramene" id="ESW06962">
        <property type="protein sequence ID" value="ESW06962"/>
        <property type="gene ID" value="PHAVU_010G091000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPMH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKPEKAN"/>
    <dbReference type="OrthoDB" id="9970274at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd22162">
        <property type="entry name" value="F-box_AtSKIP3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025886">
        <property type="entry name" value="PP2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31960:SF3">
        <property type="entry name" value="F-BOX PROTEIN PP2-A13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31960">
        <property type="entry name" value="F-BOX PROTEIN PP2-A15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14299">
        <property type="entry name" value="PP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="18"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="281" mass="31774" checksum="DBE6008C83D1A907" modified="2014-02-19" version="1">MGGSFSSCVCDGDAIPLRPRLGDLPESCVALMLMYLDPPDICKLARLNKAFRDASLADFIWESKLPLNYKFIVEKALKDASAEELGKRDIYARLCRPNLVDNGTKEIWLDKGTGGLCLAISSKALRITGIDDRRYWSRMSTEESRFHTVAYLQQIWWLEVEGDVDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKSDHIHGWDIKPVKFQLTTSDGQHAVSKTHLDNHGHWVLYHAGNFVSKNPNDLMKVKFSLAQIDCTHTKGGLCVDSVFICNSDVKQEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP11</accession>
    <name>V7AP11_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G126600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DRM1/ARP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP11"/>
    <dbReference type="STRING" id="3885.V7AP11"/>
    <dbReference type="Gramene" id="ESW07397">
        <property type="protein sequence ID" value="ESW07397"/>
        <property type="gene ID" value="PHAVU_010G126600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2D5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VISALDX"/>
    <dbReference type="OrthoDB" id="2012405at2759"/>
    <dbReference type="PhylomeDB" id="V7AP11"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008406">
        <property type="entry name" value="DRM/ARP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33565">
        <property type="entry name" value="DORMANCY-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33565:SF20">
        <property type="entry name" value="DORMANCY-ASSOCIATED PROTEIN HOMOLOG 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05564">
        <property type="entry name" value="Auxin_repressed"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="58"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="13453" checksum="207BDCB0423C3AA5" modified="2014-02-19" version="1">MMGFLHKLWDETLAGPAPETGLGKLRKFNTFSAGTAFHPTVPEDVPISRSITIVRTHSGLGSTSTSATASPSSSAPVTPRSPLSQESPGGDFKKFTRRKLSTVESAANRSPTIYDWVILSSLDRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQA9</accession>
    <name>V7AQA9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G077300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQA9"/>
    <dbReference type="STRING" id="3885.V7AQA9"/>
    <dbReference type="Gramene" id="ESW06793">
        <property type="protein sequence ID" value="ESW06793"/>
        <property type="gene ID" value="PHAVU_010G077300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHTIPDG"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="2">
        <location>
            <begin position="140"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="291" mass="33284" checksum="FEA19C4090C11E1C" modified="2014-02-19" version="1">MQLVNHSIPDGVFDNILNGVSDFFDQTTLNERRIYSKRSPSDRIRWELNSSTGENREYLKVVAHPQSHFPSNPSGFRFNYYGIPSSIYLKLFWVIWCISKILEEYGKEMRRIVIELARAVSKSLGFEEHFVEKALELKSGFDVLAMNLYPPNAKSKGAVGLPQHTDPGFIITLVQDVNGGLQILSHKGNWINAYIPHHAILIQLGDQLEILTNGMYKSHIHRVIVDNNKVQRISVVGLHGPSLDRLINPNAKFVDEKHLKKYREMTFKEFLEVNGDDEVDVQSSLEQARLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR54</accession>
    <name>V7AR54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G067700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR54"/>
    <dbReference type="SMR" id="V7AR54"/>
    <dbReference type="Gramene" id="ESW06681">
        <property type="protein sequence ID" value="ESW06681"/>
        <property type="gene ID" value="PHAVU_010G067700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPAYKKR"/>
    <dbReference type="OrthoDB" id="629492at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:001089">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000562">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315">
        <property type="entry name" value="U BOX DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315:SF63">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50176">
        <property type="entry name" value="ARM_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="8">
        <location>
            <begin position="277"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="7">
        <location>
            <begin position="423"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="689" mass="74759" checksum="3775C8B25AB9410D" modified="2014-02-19" version="1">MALFPETFTTRKRRPGASFNTSKLSDLNLLFSLLQLTDQICSINLNSAANFLFNRASCSAIRKTQLLGVVFEDLIRSSNANPNSVVFPPSLFLCLEEMYIVLHKIKTLIEDFSNGSKFNLLMQIETVADTFHRFTGELSTLLDVFPLRELTLNDDVRDIVLLIRKQCSESRPFIGTEQINLRCDVVSVLDRIKNEIVPDQANLSSIFEKLEIRDASSCRAEIENLEEEIHNRSEEQSKADLVALIGLVRFAKCVLFGASTPSPRSVSLQRSRSLEFAVPADYRCPISLELMQDPVVVATGQTYDRVSIKLWMDSGHNTCPKTGQTLSHTDLIPNRVLRNMIATWCREQKIPFEVETVTGKLNGGVSNKAALEATRMTVSFLVNKLKGNDNVPLSVEVTNGAVYELRVLAKTDSDSRACIAEAGAIPLLVRFLDVGMENPSLQVNAVTTILNLSILEANKTRIMDTDGALNGVAEVLLSGASWEAKANAAATVFSLSGVPAHRKRLGRKTGVISGLVSLARSGPEGARRDALAAILNLAADRETVARLVEGGVVAMASEIMAAMPEEGVTILEAVVKRGGLVAVAEAYAGIKRLGAVLREGSERARESAAATLVTMCRKGGSEVVAELAAVPGVERVIWELMAVGSARGRRKAATLLRILRRWAAGLDGGESEGVSTTTTVISSTTYITP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARE7</accession>
    <name>V7ARE7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G001800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARE7"/>
    <dbReference type="STRING" id="3885.V7ARE7"/>
    <dbReference type="Gramene" id="ESW07900">
        <property type="protein sequence ID" value="ESW07900"/>
        <property type="gene ID" value="PHAVU_009G001800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TILCTED"/>
    <dbReference type="OrthoDB" id="625231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31929">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="11200" checksum="2834258E67AD89D6" modified="2014-02-19" version="1">MMAIRFPTALSAKHILRRSNLFANQAAATSVDVPKGYFAVYVGEGEKKRFVIPVSLLNQPSFQQLLSIAEEEFGFTHPMGGLTIPCTQDIFFNITSGLHRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASV3</accession>
    <name>V7ASV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Kinesin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G149700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-13 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASV3"/>
    <dbReference type="SMR" id="V7ASV3"/>
    <dbReference type="STRING" id="3885.V7ASV3"/>
    <dbReference type="Gramene" id="ESW07678">
        <property type="protein sequence ID" value="ESW07678"/>
        <property type="gene ID" value="PHAVU_010G149700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEYSPGL"/>
    <dbReference type="OrthoDB" id="3176171at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003777">
        <property type="term" value="F:microtubule motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007019">
        <property type="term" value="P:microtubule depolymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007018">
        <property type="term" value="P:microtubule-based movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903338">
        <property type="term" value="P:regulation of cell wall organization or biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01367">
        <property type="entry name" value="KISc_KIF2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.850.10:FF:000012">
        <property type="entry name" value="Kinesin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027640">
        <property type="entry name" value="Kinesin-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019821">
        <property type="entry name" value="Kinesin_motor_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47971:SF9">
        <property type="entry name" value="KINESIN-LIKE PROTEIN KIN-13B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47971">
        <property type="entry name" value="KINESIN-RELATED PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00380">
        <property type="entry name" value="KINESINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00129">
        <property type="entry name" value="KISc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00411">
        <property type="entry name" value="KINESIN_MOTOR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 7" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4 6 7" id="KW-0505">Motor protein</keyword>
    <keyword evidence="2 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="9">
        <location>
            <begin position="154"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="588"/>
            <end position="619"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="243"/>
            <end position="250"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00061030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW07678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="670" mass="75357" checksum="AED14930DA63D72F" modified="2014-02-19" version="1">MNRQGQRSGATGVHHNRQHSEHYLDASSKWFNSSSNHIPPLQDYNSYGGGGRMYRNNVQKSFSEYCMDPLTPPRSYTVKKNGDEDDSPRDFSPGLLDLHSFDTELLPQIPSSNAYDFEPYIFGKQTGRARAATDNYVSNSLAAAENVKSSNVAKIKVVVRKRPLNKKETAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLDEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHNYRSQGFQLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNLNLKESISIPLSSVNTYAYEDRATDTWPEEKDGDEFSPPEDYYEQVKPSWKKNGKIELYGATDDKFKKPPNGQIKWKDIPKVESKPVQSDDGLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNAILSQKAAGIMQLQTRLTHFQKRLKEHSVLASSAGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATM4</accession>
    <name>V7ATM4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CRAL-TRIO domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G061300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the SFH family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATM4"/>
    <dbReference type="SMR" id="V7ATM4"/>
    <dbReference type="Gramene" id="ESW08635">
        <property type="protein sequence ID" value="ESW08635"/>
        <property type="gene ID" value="PHAVU_009G061300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1471">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EFLGGMC"/>
    <dbReference type="OrthoDB" id="1434354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00170">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.525.10:FF:000011">
        <property type="entry name" value="SEC14 cytosolic factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.525.10">
        <property type="entry name" value="CRAL-TRIO lipid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.20">
        <property type="entry name" value="N-terminal domain of phosphatidylinositol transfer protein sec14p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001251">
        <property type="entry name" value="CRAL-TRIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036865">
        <property type="entry name" value="CRAL-TRIO_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011074">
        <property type="entry name" value="CRAL/TRIO_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036273">
        <property type="entry name" value="CRAL/TRIO_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051026">
        <property type="entry name" value="PI/PC_transfer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45657:SF17">
        <property type="entry name" value="CELLULAR RETINALDEHYDE BINDING_ALPHA-TOCOPHEROL TRANSPORT, CRAL_TRIO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45657">
        <property type="entry name" value="CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00650">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03765">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00180">
        <property type="entry name" value="CRETINALDHBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM01100">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00516">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52087">
        <property type="entry name" value="CRAL/TRIO domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46938">
        <property type="entry name" value="CRAL/TRIO N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50191">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="CRAL-TRIO" evidence="8">
        <location>
            <begin position="143"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="589" mass="66656" checksum="795E3630D6DC1653" modified="2014-02-19" version="1">MSTNNCFEGLDERRERKLSFENNSEDDRWTRIGSLKKRALNASTKFRHSFKKKRSRKGGSRSNSLSIEDVRDVKELQAVDAFRQALVLDNLLPPRNDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEYGTDTIMEDFEFKELNEVLKYYPHGYHGVDKEGRPVYIERLGKVDPNKLMQVTTLERYLRYHVQSFEKTFAVKFPACSIAAKRHIDSSTTILDVQGVGFKNLTKSARELITRLQKIDGDYYPETLCQMFIINAGPGFKMLWNTVKTFLDPKTTSKIHVIGNKFQSKLLEIIDESELPEFLGGMCTCVDQGGCMRSDKGPWKDPNTLKMVLSGEMGCSEQIVTVSNDVGKVIECDKISYPMIRGGSDTSTGESGSEVEDIASPKPCGNCISPMLTPVYEEARLVGKARHGGRLVEYVPIVDKAIVVEKQATSRKLLCSTAGFILALYTIARSIAFRVTKGIRHSESGSASSILNITVDSTSKEESGPPLRAPGFTTTNISSSTLKRLGELEEKVDMLQSKPNVMPCEKEELLNAAVYRVDALEAELIATKRALYEALIKQEELVAYIDSHEREKFKRKVCW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATU1</accession>
    <name>V7ATU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="17">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_009G068100g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="17">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="17"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATU1"/>
    <dbReference type="SMR" id="V7ATU1"/>
    <dbReference type="Gramene" id="ESW08710">
        <property type="protein sequence ID" value="ESW08710"/>
        <property type="gene ID" value="PHAVU_009G068100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRH4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDWTQGC"/>
    <dbReference type="OrthoDB" id="619632at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000059">
        <property type="entry name" value="S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000302">
        <property type="entry name" value="Serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47974">
        <property type="entry name" value="OS07G0415500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47974:SF3">
        <property type="entry name" value="RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 17 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 17" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 17 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 17" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 20" id="KW-0732">Signal</keyword>
    <keyword evidence="4 17" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755915" description="Receptor-like serine/threonine-protein kinase" evidence="20">
        <location>
            <begin position="18"/>
            <end position="797"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="452"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="22">
        <location>
            <begin position="13"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="23">
        <location>
            <begin position="329"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="510"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="538"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW08710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="797" mass="90255" checksum="65691CF9B832D827" modified="2014-02-19" version="1">MHINLFLLLLFISTSYAATDTLPEGSSLSVEKQSDTLLSSNGDFSAGFFQVGENAFCFSVCFTRSKEPTVLWMANRDEPVNGKDSFLSLWKNGNLVLTDAGGTVIWETATLSSSKLHVKLRNDGNLLLLTSKGTIIWQSFDSPTDTLLPTQPLTERVGLVSSRSATNHSTGFYKLYYDNDNVLRLLYKGQTFSSVYWPPSWQLPINIGRSTYNITKTALLDSLGHFTSSDGFQFRSTDYPKKVYRRLKMDSDGNLRLYSFNEEHKMWEVTWQVVPQPCMIHGICGANSLCNHDPNIGRTCYCLKGFKIKDPNDWTQGCEPEFSSSDISCGSRESLGFLHVPTTELYGYDWNVTRVKSLKECQNICLSLCDKCVAVQLKFNEFSDYNCYPKTMAFNGRDSPNFDGEIYLKLPNAILRSSTKILKHSPMNCSVGLSQKLNRFYQPPEKNSTLSFLVWFAFGVGVFELSTSFLVWFFLLRTSKHPDTKDQQHHLLSATGFQRFTYAELKSATKGFKEEVGRGAGGVVYKGTLYDNRVAAIKRLNEATQGEAEFLAEISTIGMLNHMNLIDMWGYCVDGKHRLLVYEYMEHGSLADNLFGNALDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSNFLPKVADFGLSKLLNRDERGNSSFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVSGRSPMAIHSLENSGDIEQHRLVTWIREKIKHSPTCAFWMEEIIDPNLEGNYDVSEVEVLVKVALQCVEDDMNERPSMSQVAEMLQANQNKLLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU68</accession>
    <name>V7AU68_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CUE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G156600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU68"/>
    <dbReference type="SMR" id="V7AU68"/>
    <dbReference type="STRING" id="3885.V7AU68"/>
    <dbReference type="Gramene" id="ESW07756">
        <property type="protein sequence ID" value="ESW07756"/>
        <property type="gene ID" value="PHAVU_010G156600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRNX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CGTKRSF"/>
    <dbReference type="OrthoDB" id="440455at2759"/>
    <dbReference type="PhylomeDB" id="V7AU68"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14279">
        <property type="entry name" value="CUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003892">
        <property type="entry name" value="CUE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31245:SF20">
        <property type="entry name" value="F18B13.13 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31245">
        <property type="entry name" value="UBIQUITIN SYSTEM COMPONENT CUE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02845">
        <property type="entry name" value="CUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51140">
        <property type="entry name" value="CUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CUE" evidence="2">
        <location>
            <begin position="36"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="170"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="29526" checksum="4D2E73957AFF2B3D" modified="2014-02-19" version="1">MSAAVCGTKRSFFEDLPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERVLQECGNDIDAAIKRLNELCLGNADGNRNAEGSDVIVNLDAGKLEDNGNASVPEDQPTLNNHHLPVDGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGNFPPDIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVA2</accession>
    <name>V7AVA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein MIZU-KUSSEI 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G139800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVA2"/>
    <dbReference type="STRING" id="3885.V7AVA2"/>
    <dbReference type="Gramene" id="ESW09592">
        <property type="protein sequence ID" value="ESW09592"/>
        <property type="gene ID" value="PHAVU_009G139800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSCG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DPHHNTS"/>
    <dbReference type="OrthoDB" id="672310at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010274">
        <property type="term" value="P:hydrotropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006460">
        <property type="entry name" value="MIZ1-like_pln"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01570">
        <property type="entry name" value="A_thal_3588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31696:SF4">
        <property type="entry name" value="OS08G0171800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31696">
        <property type="entry name" value="PROTEIN MIZU-KUSSEI 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04759">
        <property type="entry name" value="DUF617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="245" mass="27123" checksum="8012DABD61C31ADA" modified="2014-02-19" version="1">MGEPRSAEATPPPPPPPPMALSLVRPSQKKRQKPKVIRVFRSVFRSLPIITPSCKFPSPDNNHHHQHHKTINNGIKVTGTLFGRRKGRVSLSVQENPRCLPSLVVELSMHTNTLQKNMASGTVRLALECEKRSEKDKTRIEEEPLWSMYCNGKKNGYGVRREATDEDLYVMELLKAVSMGAGVLPSRSEVEEGGDSGGGEGGELAYMRAPFEHVVGSKDSETLYMMSPDLQGNSGPDLTIFFVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXA1</accession>
    <name>V7AXA1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nas2 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G195100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXA1"/>
    <dbReference type="SMR" id="V7AXA1"/>
    <dbReference type="STRING" id="3885.V7AXA1"/>
    <dbReference type="Gramene" id="ESW10272">
        <property type="protein sequence ID" value="ESW10272"/>
        <property type="gene ID" value="PHAVU_009G195100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3129">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="72325at2759"/>
    <dbReference type="PhylomeDB" id="V7AXA1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070682">
        <property type="term" value="P:proteasome regulatory particle assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.42.10:FF:000107">
        <property type="entry name" value="26S proteasome non-ATPase regulatory subunit 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040815">
        <property type="entry name" value="Nas2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035269">
        <property type="entry name" value="PSMD9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12651">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12651:SF1">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18265">
        <property type="entry name" value="Nas2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="PDZ domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nas2 N-terminal" evidence="3">
        <location>
            <begin position="12"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="59"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF18265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="24724" checksum="4BE49E7F44614A16" modified="2014-02-19" version="1">MVATNVKAETMSLMDKRSAVEAEMNAIIARLSQPGAPGLSGGLLNSEGFPRSDIDIPVVRAERRRLAELRNDHKEITEKIDQNIQILHSARLGSSVYKNPVNDDGSDTQTSSTIDTVASMTAQNVLMRHSPNSMDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNLGRAVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXY3</accession>
    <name>V7AXY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">LisH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G099700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the VPRBP/DCAF1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7AXY3"/>
    <dbReference type="STRING" id="3885.V7AXY3"/>
    <dbReference type="Gramene" id="ESW09096">
        <property type="protein sequence ID" value="ESW09096"/>
        <property type="gene ID" value="PHAVU_009G099700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1832">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECSQDQA"/>
    <dbReference type="OrthoDB" id="1420029at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080008">
        <property type="term" value="C:Cul4-RING E3 ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009908">
        <property type="term" value="P:flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
        <property type="term" value="P:leaf development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000366">
        <property type="entry name" value="DDB1-and CUL4-associated factor homolog 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033270">
        <property type="entry name" value="VPRBP/DCAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13129:SF4">
        <property type="entry name" value="DDB1- AND CUL4-ASSOCIATED FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13129">
        <property type="entry name" value="VPRBP PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00667">
        <property type="entry name" value="LisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="219"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="274"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="935"/>
            <end position="1013"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1210"/>
            <end position="1234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1816"/>
            <end position="1938"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="222"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="314"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="343"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="365"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="384"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="938"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="954"/>
            <end position="969"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="993"/>
            <end position="1013"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1215"/>
            <end position="1234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="1827"/>
            <end position="1852"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="1870"/>
            <end position="1898"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="1909"/>
            <end position="1931"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1938" mass="212052" checksum="7821B2ACDC4E0A9D" modified="2014-02-19" version="1">MEDQANQAPPPHDEDDDSKKEEDELITKVNKLMEKITSAPDNPKATVLHALASILETQESRYMDENGHSSSSTARAAHVIGRLGGLIRENDEFFELISSKFLSETRYSTSIRAAAGRLLLCCSLTWIYPHVFEEPVMENIKNWVMDDNTGMSSEEQNLKQSSGKREASDSEMLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSSNQKDVTHITESRHASANTSGRGRDDGRGRFRQILEPNHLDDTRIIDERSLDDVILERGPDRSISGQTLQEGSWMEGKPPDGLGEGVDVQEVDSDGEDRWRYRDTRDGRTKYSEHDDNVRDDSSRRRSNRGWGRSKGKGRVNEGTVESDSILSSPGSGSRLVHGRRDRSVLRNADVRRVSDSKKTPGRTSLEASGFEREDHDDCFHECRIGNKDITDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTVASEEYKSSNDEEAAILAASKAASTVIDAATAVEISRSSIGNNTVTENESGKETETNEDVEEHFIPDTQSLSQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREPSKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSQVVYHVVELALQLLDSNQDQARKNAALFFAASFVFRAVLDAFDSLDGLQKLLGLLNDAASVRSGINSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTSVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDGVFLQLQKDRKLGPAFVRTRWLAVEKFLAYNGHVTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNVERNVSDRAVHSTSQIDPRERNGDSNAIDRGSAASLSAQPVSSTPQTPVASATSGLVGDRRISLGVGAGCAGLAAQLEQGYRQARETVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAQTASMLLKEAQFTPLPSVIPPSSLAQQPTTQEASSTQIQWPSGRTPSGFLSNKLKFNSKDEDAVLKSDSVSAKKKSLTFSSSFHSRLQLFDSQQSSVKKFSNTAKESSEISVVETGSEYSMKHNIDIGSQFKTPITLPAKRKLSDLKDIPTFSSSGKRLNVGDQGLRSPICSSAIRKSSLQPDAVGFFTPTCNLKNQHTRCMGDLVDENQCSTSHLGHMTPSSQVLNDLQPSNPECVTLDSLVIQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKHSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQLVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFESNNSNVVESYTGHQAPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCRAARFSNSGNVFAALSSESSRREILLYDIQTCQLESKLSDTFATSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHHLFSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDDDGDVDPTLGPGLGGDSGSDADMSNDDEDDDSVSDLDEDEDGDFILDDVDFDGGTGILEIVTEGDEDDDDSQVLESLSSDDEDFVGNGFGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYC3</accession>
    <name>V7AYC3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Large ribosomal subunit protein uL18c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">CL18</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G221700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYC3"/>
    <dbReference type="SMR" id="V7AYC3"/>
    <dbReference type="STRING" id="3885.V7AYC3"/>
    <dbReference type="Gramene" id="ESW10584">
        <property type="protein sequence ID" value="ESW10584"/>
        <property type="gene ID" value="PHAVU_009G221700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1870">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NKQIYAQ"/>
    <dbReference type="OrthoDB" id="1932324at2759"/>
    <dbReference type="PhylomeDB" id="V7AYC3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008097">
        <property type="term" value="F:5S rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00432">
        <property type="entry name" value="Ribosomal_L18_L5e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.100:FF:000001">
        <property type="entry name" value="50S ribosomal protein L18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01337_B">
        <property type="entry name" value="Ribosomal_uL18_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057268">
        <property type="entry name" value="Ribosomal_L18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004389">
        <property type="entry name" value="Ribosomal_uL18_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005484">
        <property type="entry name" value="Ribosomal_uL18_bac/plant/anim"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00060">
        <property type="entry name" value="L18_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12899">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12899:SF3">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL18M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00861">
        <property type="entry name" value="Ribosomal_L18p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53137">
        <property type="entry name" value="Translational machinery components"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00035303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00082729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="161" mass="17706" checksum="AE37AA36F2A3DC04" modified="2014-02-19" version="1">MLASSLSFLHSCGFPSSSSSSSSLSTTSQPKLKPFMVEAKVRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTAMCTLASASTMQKTIAEEFSYSAGPTVEVAKRIGEIIAKSCLEKGIKKVAFDRGGYPYHGRVQALADAAREHGLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ37</accession>
    <name>V7AZ37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">5'-nucleotidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G2204001g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'(3')-deoxyribonucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ37"/>
    <dbReference type="Gramene" id="ESW10565">
        <property type="protein sequence ID" value="ESW10565"/>
        <property type="gene ID" value="PHAVU_009G2204001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2469">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="409330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008380">
        <property type="entry name" value="HAD-SF_hydro_IG_5-nucl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103">
        <property type="entry name" value="5'-NUCLEOTIDASE DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103:SF22">
        <property type="entry name" value="HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05761">
        <property type="entry name" value="5_nucleotid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="22"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="192" mass="21254" checksum="DE83159644128E13" modified="2014-02-19" version="1" fragment="single">GVHESSKPTFFRLAKFDPVHAHTKNPPEKFSGGGFRRRFSASSGSSGERCSFRRATTMVVGGGGRRWSMAVAVTVNGGLYSGGSANMVESSLNIHGDEILFIGDHIYTDVNQSKVHLQWRTALICRELEEENSALIHSRGCRESLLELINQKEVVCDIFNQLQLTLQRRSKKLNSQLLLSYFLGVPSLGIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ82</accession>
    <name>V7AZ82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DOG1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G223700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ82"/>
    <dbReference type="SMR" id="V7AZ82"/>
    <dbReference type="STRING" id="3885.V7AZ82"/>
    <dbReference type="Gramene" id="ESW10610">
        <property type="protein sequence ID" value="ESW10610"/>
        <property type="gene ID" value="PHAVU_009G223700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R2CB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYYLEWF"/>
    <dbReference type="OrthoDB" id="683795at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051886">
        <property type="entry name" value="Seed_Dev/Stress_Resp_Reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025422">
        <property type="entry name" value="TGA_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46354">
        <property type="entry name" value="DOG1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46354:SF9">
        <property type="entry name" value="PROTEIN INAPERTURATE POLLEN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14144">
        <property type="entry name" value="DOG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51806">
        <property type="entry name" value="DOG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DOG1" evidence="1">
        <location>
            <begin position="11"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="262" mass="30041" checksum="54A009D0E6BEBD1E" modified="2014-02-19" version="1">MLKVFGRQKASRSFKEYYLEWFSTLKNNLLPLLRRSIAGESPAILSSHVEMLHQHFQSYYHALDAAAASDPTQLLSQDWRNSLEKPLLWLADLHPFLFTNLVRSFLHQQSPSDTDQKNPRRHLPLPFPDRPWQVALAWSNSSDFLTACMDQIECRLRHIVPTLSDRLKSAESAFVECVVGDWFQCWEEQNIAGAKVAVGADVKAHLEEVVSVVLYANRVRRSVLVRIMSATTVYQAALFFEGLAQFLIGFRDHNLLNALEHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B163</accession>
    <name>V7B163_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L34Ae</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G041600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B163"/>
    <dbReference type="STRING" id="3885.V7B163"/>
    <dbReference type="Gramene" id="ESW11574">
        <property type="protein sequence ID" value="ESW11574"/>
        <property type="gene ID" value="PHAVU_008G041600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTCK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YQNWNCN"/>
    <dbReference type="OrthoDB" id="772197at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012870">
        <property type="entry name" value="DUF1666"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46741">
        <property type="entry name" value="OS09G0413600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46741:SF2">
        <property type="entry name" value="RIBOSOMAL PROTEIN L34AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07891">
        <property type="entry name" value="DUF1666"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="345"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="766" mass="89301" checksum="CF267D17D94623B7" modified="2014-02-19" version="1">MNPFAEYFRNFLSRLLNTLFWVFTKVFMRFYCFDSSEAMKPLCSSEFSCDNEQAESIHSKSENFGTLADALSRESDQNYSNVCQGGTKSNEKCCSETVRDSHNFGPEEEETTKLVFKFEYQKWNCNYDEELRGGYDESIDFVNGGDAVSASTTNKYEFMSGKSFRHFLDEPQAGNFTVKECFVHSNDAFKLENQVSYDFGFLSRKNIRAENCEEGISEENLDNFTEKKLKPEESIEHTVEPIVHNFLSEDDFICSSSNSDSIISSFGEGFLSDTDFGNILKFETMGSNAEENAVLTEEDLEFGDEKSYENLDVGYEPDDCTEEDEDIMDELGKLEEECRLEKSSGKSFENKNINSKPQQSTKPHSQTLTTIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYAIGVLQSKDPLQSFSTSKNTSPAFTNILPRGFRLSRRKQIEADPMKKFIRELYSDLEMVYVGQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLQGPRVENYARNRCAMRNLLQVPVIKEDNAKDKRKFSKREEDKDAITSDMLVEILEESIRTIWRFIRADKDASSLALKGLKENEVQLQDPSNSELLVEIRTDLQKKEKRLRELLRSGSCILKKFQKHNEDEADQVLYFFSQVDMKLVLRVLNMSRITTDQLAWCRSKLNKITFINRRIHVEPSLLLFPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B225</accession>
    <name>V7B225_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">acyl-CoA hydrolase</fullName>
            <ecNumber evidence="8">3.1.2.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G065700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a fatty acyl-CoA + H2O = a fatty acid + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16781"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28868"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:77636"/>
            <dbReference type="EC" id="3.1.2.20"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Peroxisome matrix</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the C/M/P thioester hydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.20" evidence="8"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B225"/>
    <dbReference type="STRING" id="3885.V7B225"/>
    <dbReference type="Gramene" id="ESW11869">
        <property type="protein sequence ID" value="ESW11869"/>
        <property type="gene ID" value="PHAVU_008G065700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3016">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QVWFRTN"/>
    <dbReference type="OrthoDB" id="68328at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005782">
        <property type="term" value="C:peroxisomal matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047617">
        <property type="term" value="F:fatty acyl-CoA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006637">
        <property type="term" value="P:acyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009062">
        <property type="term" value="P:fatty acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03444">
        <property type="entry name" value="Thioesterase_II_repeat1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03445">
        <property type="entry name" value="Thioesterase_II_repeat2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.210:FF:000003">
        <property type="entry name" value="Acyl-CoA thioesterase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000109">
        <property type="entry name" value="Acyl-CoA thioesterase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.210">
        <property type="entry name" value="Acyl-CoA thioesterase, double hotdog domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042171">
        <property type="entry name" value="Acyl-CoA_hotdog"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003703">
        <property type="entry name" value="Acyl_CoA_thio"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018488">
        <property type="entry name" value="cNMP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049449">
        <property type="entry name" value="TesB_ACOT8-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025652">
        <property type="entry name" value="TesB_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11066">
        <property type="entry name" value="ACYL-COA THIOESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11066:SF34">
        <property type="entry name" value="ACYL-COENZYME A THIOESTERASE 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13622">
        <property type="entry name" value="4HBT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02551">
        <property type="entry name" value="Acyl_CoA_thio"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="Thioesterase/thiol ester dehydrase-isomerase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00888">
        <property type="entry name" value="CNMP_BINDING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="9">
        <location>
            <begin position="36"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW11869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="425" mass="48105" checksum="5D4164B1EEA0EB8C" modified="2014-02-19" version="1" fragment="single">MIQVNVTTSITLLQSSNSITVMAKEEVFEFLGNVPLLQRLPGSSVRKISELVIPKYYEPREYVVREGERGDGFYFIWEGEAEVVGSVNADDDNHPEFLLKRYDYFGFGLSNEVHRADVIALTKLSCLVLPHEHSALLQSNSIWSAEKSVDTCSLVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKSVDCLKVVHSLHVYFLLVGDFNIPIIYQVSRVRDGKSFATRKVDAIQKGNVIFTMLASFHKEELGFQHQEVSIPSVPAPNKLLSLEELRELRLTDPRLPRTYRNKVATVEFIPWPIEIRFCEPRASTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGMKARAVSLDHSMWFHRPLRADDWVLFVISSPTSCNARGYVTGEMFNQKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B233</accession>
    <name>V7B233_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Rx N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G066700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B233"/>
    <dbReference type="SMR" id="V7B233"/>
    <dbReference type="Gramene" id="ESW11879">
        <property type="protein sequence ID" value="ESW11879"/>
        <property type="gene ID" value="PHAVU_008G066700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1934998at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186:SF45">
        <property type="entry name" value="DISEASE RESISTANCE RPP13-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="3">
        <location>
            <begin position="151"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="4">
        <location>
            <begin position="284"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="107"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="117"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="537" mass="62191" checksum="4E93AFF6119CB268" modified="2014-02-19" version="1">MSIRTNKMKAVPVLLKQLMTTRSKFNERGRDESFDGKLEMLRLDLNKIKDVFVRVKKNEEELLDILAEVHAHLCKLDCRKLGEDMNGICKRIRDSAHKLLPMDAFDDSSKEEDHKGGQSQQLQQPHQKSWTRVDYEGLKNVPKECLSSLLIFPENAVIRKSNAINLWIGEGLVIDIENRTAREWGEHVIHDLLKYNVIVRYGKGKDPLINKFQIPPSAYGQLESLVSKENVEDPGQDRLELAQKKVTLGDLHFGYSIRTVFNVEVLQLGRWKDSPVHHIEVGSEDFLEELRNLTQLKYLSLRGISRIFKLPSSIVELERLLVLDLKACHNLETLPNDISSMKSLTHLILSQCYLLEGMPNGIEKLKNLQVLKGFVISTPEKTPCRISDFVNLKKLTRLSIHIGSQAVIKDKDFESLSQIFTLDHLKISWSGSDPRYGNFQLSLPQNLRKLHLECFPGKSFREFLYDMRYLWKNMELKITGGKLASMEVDFEWWHVNILRLKYLKHLKVDIDDLKSFFPGLKYAEIKQVSEHIEHEWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B258</accession>
    <name>V7B258_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Vacuolar protein sorting-associated protein 54 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G217900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
            <location evidence="1">trans-Golgi network</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VPS54 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B258"/>
    <dbReference type="SMR" id="V7B258"/>
    <dbReference type="STRING" id="3885.V7B258"/>
    <dbReference type="Gramene" id="ESW10536">
        <property type="protein sequence ID" value="ESW10536"/>
        <property type="gene ID" value="PHAVU_009G217900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2115">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKQAVML"/>
    <dbReference type="OrthoDB" id="10259024at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000938">
        <property type="term" value="C:GARP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019905">
        <property type="term" value="F:syntaxin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006896">
        <property type="term" value="P:Golgi to vacuole transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042147">
        <property type="term" value="P:retrograde transport, endosome to Golgi"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.860">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039745">
        <property type="entry name" value="Vps54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012501">
        <property type="entry name" value="Vps54_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12965">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING 54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12965:SF0">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07928">
        <property type="entry name" value="Vps54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Vacuolar protein sorting-associated protein 54 C-terminal" evidence="8">
        <location>
            <begin position="767"/>
            <end position="897"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="713"/>
            <end position="755"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="720"/>
            <end position="735"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW10536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1026" mass="113119" checksum="168E2DADCDFBA4A9" modified="2014-02-19" version="1">MDSPPSQQSWGRSPTSLSSSASLSKSNSNSNSDSIQSLSSILNNPHASDAASWGAWWSSASAVAPPEFAPIAAAKAASEVSRSDFQHYVVPIAEAYHRFEDIRNHTSKEQINDLANAAASSGQGEALVACLREVPALYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLDAKILHGCTQIRHLKDTIRLLDADLVQDARQIQELNGTRTNLLALLQKLRLIFYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELSGLHCFRHLRDHVIGFIESINSILSAEFIRASLQDAAEKDGIILSKAKATASLPMNGKDDDVKLEEEESNNFKDCLLPTVIGLLRTAKLPSVLRTYRDTLTGDMKNAIKTAVAELLPVLASRGSESEFFSGDRTVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKRAIEWILNNRDGHYAADSVVAAIAHGAAAAETSQESEVHGTTLLPYSSQRSVAKGSSFQGKSIDAVSSYNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLQEFLAIYSITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMSKIKAVLDQETWVEIDVPDEFQSIINMLFTSDNLTSENFNDTEDDNATSYNGVVTNDDSMPMANSAQSSAEHQIMRANSIEASMNNETSDRSKSLDDSMEPNKGHGRITSAHGNNTEKDHKKSASQALNYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPEIRQILFLKVPETRKILLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFGQVVIIFHSQISEAFSRFDISTPQAQNRLYRDVKHILQCIRSLPLGDLSKSDTPNWGQLDEFLVKRFGNDAVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7B357</accession>
    <name>V7B357_PHAVU</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G0968000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_008G0968000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="630188at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="70" mass="7746" checksum="4726A28C27BD791F" modified="2014-02-19" version="1" fragment="single">MIPSGIMKPSRGKLPLPIIIITTCVLVFVAILYAERLSFLSSKSIFKFKPCPRQITKPKSILAGDKKADE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4L3</accession>
    <name>V7B4L3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G120100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4L3"/>
    <dbReference type="Gramene" id="ESW12520">
        <property type="protein sequence ID" value="ESW12520"/>
        <property type="gene ID" value="PHAVU_008G120100g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10645517at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="8283" checksum="3E50304E149FA8EF" modified="2014-02-19" version="1">MESLWVGIVRGVGEQRNILIFKQGKPNTEEIFRQAQLRSWLWMKNRICAFNFSFSDWLFNPKLCVKGYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4Z2</accession>
    <name>V7B4Z2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G156900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW12972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW12972"/>
        <property type="gene ID" value="PHAVU_008G156900g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HISNDYA"/>
    <dbReference type="OrthoDB" id="663108at2759"/>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34278">
        <property type="entry name" value="PROTEIN THI031, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34278:SF1">
        <property type="entry name" value="PROTEIN THI031, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="163" mass="18533" checksum="777786F702EC14BD" modified="2014-02-19" version="1">MKREGRQHGMVRSYRILPTPVNPRPNTRIITQFDSPPTAGLFVKVSSKPANHSKFTGKCAKPHCTGCHFHPACKSKGKTKGSQKHKQWRVLDQPDSDFFGLSATLTLDHISNDYTADEGSKDDYDWEKKNDNKCTSEMGVSFRMDQVREEKEDEDWLLVESSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B510</accession>
    <name>V7B510_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G074100g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="17" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the synaptotagmin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B510"/>
    <dbReference type="SMR" id="V7B510"/>
    <dbReference type="STRING" id="3885.V7B510"/>
    <dbReference type="Gramene" id="ESW11963">
        <property type="protein sequence ID" value="ESW11963"/>
        <property type="gene ID" value="PHAVU_008G074100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11964">
        <property type="protein sequence ID" value="ESW11964"/>
        <property type="gene ID" value="PHAVU_008G074100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1012">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFYHEFD"/>
    <dbReference type="OrthoDB" id="67700at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21677">
        <property type="entry name" value="SMP_SYT"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="synaptotagmin-4 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031468">
        <property type="entry name" value="SMP_LBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045050">
        <property type="entry name" value="Synaptotagmin_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039010">
        <property type="entry name" value="Synaptotagmin_SMP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774:SF190">
        <property type="entry name" value="C2 CALCIUM_LIPID-BINDING ENDONUCLEASE_EXONUCLEASE_PHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774">
        <property type="entry name" value="EXTENDED SYNAPTOTAGMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17047">
        <property type="entry name" value="SMP_LBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51847">
        <property type="entry name" value="SMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0106">Calcium</keyword>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="10" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="SMP-LTD" evidence="15">
        <location>
            <begin position="66"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="14">
        <location>
            <begin position="247"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="551"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="391"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="13">
        <location>
            <begin position="570"/>
            <end position="579"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW11963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="18">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="579" mass="60755" checksum="F2136EE86FB90547" modified="2014-02-19" version="1">MGLFSGIFLGMLFGIALMAAWERMMKYRSAKRIAKAVDIKLLGSLNRDDLKKICGDNFPDWISFPVYEQVKWLNKQLSKLWPFVADAATLVIRESVEPLLEEYRPPGITSLKFSKLSLGIVAPKVEGIRVQNLKKGQIIMDIDFRWGGDPNIVLAVEAALVASIPIQLKDLQVFTIIRVILQLADEIPCVSAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNSIVTDMLQWPHRIVVPLGGIPVDTSDLELKPQGTLRVKVMKANDLKNMEMIGKSDPYAVLHIRPLFKVKTKAIDNNLNPVWNEVFDLIAEDKETQSLIVEVFDKDIGQDKRLGVAKLPLIGLKAETEKEFQVRLLPSLDTLKVKDKKDRGTLTMKIFYHEFDKKEQLVALEAEKKILEERKKLKEEGVIGSTMDAVDGAASMVGSGVGMVGSGVVSGVGMVGSGVVSGAGVVGSGVASGAGVVGSGVASGAGLVGSGVASGAGLVGSGVATGAGVVGSGVSSGAGLVGSGIGAGVGFVGSGLGAMGSGLSKAGKFMGRTIAGQGGKRSGSSTPVNAEEAGGGAKPRQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6Z2</accession>
    <name>V7B6Z2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transposase-associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G095500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6Z2"/>
    <dbReference type="STRING" id="3885.V7B6Z2"/>
    <dbReference type="Gramene" id="ESW12230">
        <property type="protein sequence ID" value="ESW12230"/>
        <property type="gene ID" value="PHAVU_008G095500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12231">
        <property type="protein sequence ID" value="ESW12231"/>
        <property type="gene ID" value="PHAVU_008G095500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12232">
        <property type="protein sequence ID" value="ESW12232"/>
        <property type="gene ID" value="PHAVU_008G095500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12233">
        <property type="protein sequence ID" value="ESW12233"/>
        <property type="gene ID" value="PHAVU_008G095500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SFE3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DQSWVGP"/>
    <dbReference type="OrthoDB" id="1420514at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039266">
        <property type="entry name" value="EN-1/SPM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004252">
        <property type="entry name" value="Probable_transposase_24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029480">
        <property type="entry name" value="Transpos_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33157">
        <property type="entry name" value="AUTONOMOUS TRANSPOSABLE ELEMENT EN-1 MOSAIC PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13963">
        <property type="entry name" value="Transpos_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03004">
        <property type="entry name" value="Transposase_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transposase-associated" evidence="3">
        <location>
            <begin position="7"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="132"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="573"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="462"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="140"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="573"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="601" mass="68746" checksum="C87EEEFC89586A52" modified="2014-02-19" version="1">MEEPTHRTWMYTRLLPRQKGYTTEFLEGVKKFIDFACRQPKYLNEGVIRCPCKLCKNEKDLVPDKVNVHILEKGFAPKYWYWTFQGEKVPHIKDDAEVNSVCKSTPELSVALTMLNMSRTCFNDQPHLMQTQSQPQSILSRTPPQSQSYSTQQTQPPIQSQSHTTQPTQPQPQNQYEHVPTQVLRMEEYPKVKKALISSSCEVSGGKNGNKIMILPEGDGFDQHKLVVGTIASIIRTNLEEAKPSWKQLSTSQRDSWFNIFESKFTWPPQYKDMVRRNLEKRGSAKMTQLMQDVRKNLNQKPTWMENGVWAQLKAHWGSSNFKQKSEINKRNRESMDGASLHTGGSIPHRLHWKRMKEAKGTDPSLSEFYFRTHRRKKDQSWVGPHAESAYDKFVKKKFELSSMASKVISGEDVADSQPSKDHMPSDFDVWVDSVGKKKGRIFGLGSIGKTLFTSSSPPMNLSANSEEVDILRNRIQELNESLQRREQEKLNMRQELTQTKNQGSVSKTLLTSPSQPVKVSAYSEEIDELRNQIKALNESLRRQEQEKLEMKQELIQTKKQVLALMLHLGFVGSSTGPSSSPQHSSVNEDSGSDTVSDHIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7B769</accession>
    <name>V7B769_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G220800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B769"/>
    <dbReference type="Gramene" id="ESW13727">
        <property type="protein sequence ID" value="ESW13727"/>
        <property type="gene ID" value="PHAVU_008G220800g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10488893at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754551" evidence="2">
        <location>
            <begin position="27"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW13727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="12087" checksum="C3EC239ECCE0559D" modified="2014-02-19" version="1">MMRKKKMKSIRIVIMMMMIMLSCTEGNDIMPEKSCSAKCAPGCIFANLAYPICYAICIDKCRHPYPPSVSPDCITSCTTTITKSTSNNIGIPFLTILISFLISFALFTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B807</accession>
    <name>V7B807_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G126700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B807"/>
    <dbReference type="SMR" id="V7B807"/>
    <dbReference type="Gramene" id="ESW12606">
        <property type="protein sequence ID" value="ESW12606"/>
        <property type="gene ID" value="PHAVU_008G126700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHESYTA"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7B807"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044179">
        <property type="entry name" value="PPR5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47874">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47874:SF6">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="189"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="225"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="260"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="296"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="366"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="436"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="56"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW12606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="513" mass="57887" checksum="49A887FEC464D7A2" modified="2014-02-19" version="1">MAAASLSTTTPGVPPFPPPISARRTASTRIQVSPRPDPEPSSSPSSTALTVVDERTRRIARELEELKKREAKERKELRNQKLASQKAVSVILWREATKAVIDKSGRKKKGPINAKKLLPRTVLEALHERVAALRWESALKVFELLREQIWYSPNTGIYIKLIVMLGKCKQPEKAHGLFLAMVDEGCVLDCESYTALLSAYSRSGLLDKAFTLLEEMKNTPGCQPDVQTYSILIKSCLQVFAFDKVQGLLSDMANHGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRDCQPDAWTMNSTLRAFGNIGQIETMEKCYEKFQTAGIQPNVQTFNILLDSYGKAEEYKKMSAVMEYMQRYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVMRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGVPEMMKQSGCKPDIITYRTMIKAYSFKGMDAHAKEIRELLPTVTRPSLRRDKPDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B897</accession>
    <name>V7B897_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Hexosyltransferase</fullName>
            <ecNumber evidence="13">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G133000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 13">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Golgi apparatus membrane</location>
            <topology evidence="2 13">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the glycosyltransferase 31 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="13"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B897"/>
    <dbReference type="Gramene" id="ESW12676">
        <property type="protein sequence ID" value="ESW12676"/>
        <property type="gene ID" value="PHAVU_008G133000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2288">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AQKHIPR"/>
    <dbReference type="OrthoDB" id="1708289at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008378">
        <property type="term" value="F:galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002659">
        <property type="entry name" value="Glyco_trans_31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214:SF5">
        <property type="entry name" value="BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01762">
        <property type="entry name" value="Galactosyl_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10 13" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="12 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU363063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW12676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="152" mass="17258" checksum="C612A47242F1756A" modified="2014-02-19" version="1">MSESSGRSRYLMVVGINTAFSNRKRRDSIRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWGADFYIKVDDDVHVNIATLGQTLVRHRSKQRVYIGCMKSGPVLSQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9D2</accession>
    <name>V7B9D2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G166700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9D2"/>
    <dbReference type="STRING" id="3885.V7B9D2"/>
    <dbReference type="Gramene" id="ESW13086">
        <property type="protein sequence ID" value="ESW13086"/>
        <property type="gene ID" value="PHAVU_008G166700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0596">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="20524at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000776">
        <property type="term" value="C:kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004712">
        <property type="term" value="F:protein serine/threonine/tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033316">
        <property type="term" value="P:meiotic spindle assembly checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007094">
        <property type="term" value="P:mitotic spindle assembly checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034501">
        <property type="term" value="P:protein localization to kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000131">
        <property type="entry name" value="Dual specificity protein kinase TTK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974:SF21">
        <property type="entry name" value="DUAL SPECIFICITY PROTEIN KINASE TTK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22974">
        <property type="entry name" value="MIXED LINEAGE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="246"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="202"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="202"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW13086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="35796" checksum="E61086AF3493EFBB" modified="2014-02-19" version="1">MEYMSSHMGSLALTDGASIGFNQHVKHHNMLQAESETSLLSEGGKSSLLPKRRIVTQDHLQQFKNFLSQPATQSSTVGLPCLTTTSVHSTSAPMLNSIPHCSNSCMDSDSHVAAEPYDNLNVNPHPVTQRVVKSPYDSLKDTNRMLIDAELTFKQSDLSKEQQGCLLKETSISKYTSRCDDMLSKGEESAAVTNILPQALTSSSNTNLESSSLEKQEKNASCKGPSVTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGHDYATAYSFCQEIEYLNRLKGKNNIIQLMDYEVLMKKMKHWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBG5</accession>
    <name>V7BBG5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Surfeit locus protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G228200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBG5"/>
    <dbReference type="STRING" id="3885.V7BBG5"/>
    <dbReference type="Gramene" id="ESW13811">
        <property type="protein sequence ID" value="ESW13811"/>
        <property type="gene ID" value="PHAVU_008G228200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRC9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFNQDPL"/>
    <dbReference type="OrthoDB" id="127285at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008833">
        <property type="entry name" value="Surf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47854">
        <property type="entry name" value="SURFEIT LOCUS PROTEIN 2 (SURF2)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47854:SF1">
        <property type="entry name" value="SURFEIT LOCUS PROTEIN 2 (SURF2)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05477">
        <property type="entry name" value="SURF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="117"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="141"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="184"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="215"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="232"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="254"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="280"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="290" mass="32980" checksum="23BA02FCD1E0FBB8" modified="2014-02-19" version="1">MATSEDSGKKEGTNLLGSPTFTELGNGRFKCVETGHEVLSKDIASYSHSKKCRLGLIDFALSNRKPPLNIFKQDPLCRSKLICKLTGDNVNKSEEHIWKHMSGKRFLNKLEREEEEKSSCQGVEVEERVQESKSADGGRKDIKKKKKNKKKKNNNKGIDEENLLESKSENSGEKDRMKKKKKNKDTTIEEIRSEVRKSSDEDSDIEEEDFWRPPVGDRWDHDDGGDRWGSESESESESVQEIEDGNVIDGTAAEDCKETEELSSRTKRMSIEIGPSSFATRKKKSKKHHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD01</accession>
    <name>V7BD01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ferric-chelate reductase (NADH)</fullName>
            <ecNumber evidence="14">1.16.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G073800g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>2 a Fe(II)-siderophore + NAD(+) + H(+) = 2 a Fe(III)-siderophore + NADH</text>
            <dbReference type="Rhea" id="RHEA:15061"/>
            <dbReference type="Rhea" id="RHEA-COMP:11342"/>
            <dbReference type="Rhea" id="RHEA-COMP:11344"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.16.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ferric reductase (FRE) family.</text>
    </comment>
    <dbReference type="EC" id="1.16.1.7" evidence="14"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD01"/>
    <dbReference type="SMR" id="V7BD01"/>
    <dbReference type="STRING" id="3885.V7BD01"/>
    <dbReference type="Gramene" id="ESW15455">
        <property type="protein sequence ID" value="ESW15455"/>
        <property type="gene ID" value="PHAVU_007G073800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0039">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMFTHID"/>
    <dbReference type="OrthoDB" id="167398at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140618">
        <property type="term" value="F:ferric-chelate reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:monoatomic ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06186">
        <property type="entry name" value="NOX_Duox_like_FAD_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.80:FF:000039">
        <property type="entry name" value="Ferric reduction oxidase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013112">
        <property type="entry name" value="FAD-bd_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013121">
        <property type="entry name" value="Fe_red_NAD-bd_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050369">
        <property type="entry name" value="RBOH/FRE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972:SF41">
        <property type="entry name" value="FERRIC REDUCTION OXIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972">
        <property type="entry name" value="NADPH OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08022">
        <property type="entry name" value="FAD_binding_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08030">
        <property type="entry name" value="NAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00052">
        <property type="entry name" value="Ferric_Reductase_Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01168">
        <property type="entry name" value="Ferric_reductase_subgroup_(FRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="11" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="12 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="22"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="122"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="173"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="213"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="256"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="304"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="550"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="596"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="16">
        <location>
            <begin position="327"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00050970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00066905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW15455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="717" mass="80958" checksum="17E04B535ACC6E5A" modified="2014-02-19" version="1">MNSESEMSGGVSGKMKKYLQKGIWWFSLFIFVGYVMVWILRPTNFFYLQWFPHIEAKTDSIYFGKQGTIILIYTFPILLIATLTSVYLHLEQKRSNHNTESKGGRFLGLASWKRPLLTKGPLGIITMTELSFAIMFVLLLIWTFFSYLHSLFASAAKDAAKERDQVWEIKLEYSSLALGLVGNICLVLLFFPVSRGSSILRFIGLTSEGSIKYHIWLGHTAMLLFTAHGLGYIIFWYKTHQILEIFKWNKVGVSNVAGEVSLLAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVVFYVLHLGFSYSCLVLPGFYLFMIDRYLRFLQSQKKIRLVSARVLPCEAVELNFSKNLGLSYAPTSTIFINVPGISKLQWHPFTITSCSDTDPDTLSVVIRSSGTWSNTLYQKLSSSSPLSHLDVSIEGPYGHDSTSYSRHELLVLISGGSGITPFISIIRSLVFKANTEGGKTPRVLLLCAFKKSIDLTMIDLILPVSATSTTFDISRLQLQIEAYVTREKQPDMNDKRLTQTSWFKANLLDEPVSEVLGKYSWLYLSIIISSSFILFLLLIGILTRYYIYPIDYNTNLIYPNFSRSSLSMLFICISIAIVATSAFLWNKKQNKDLGQIKNIYTSDQSTSPGSGYYNADKELGSLPLQSLVETAKVHYGEKPDIKKILSGCTGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESVSFSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEW9</accession>
    <name>V7BEW9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G0728000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEW9"/>
    <dbReference type="STRING" id="3885.V7BEW9"/>
    <dbReference type="Gramene" id="ESW15443">
        <property type="protein sequence ID" value="ESW15443"/>
        <property type="gene ID" value="PHAVU_007G0728000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKHRDAP"/>
    <dbReference type="OrthoDB" id="1737895at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="59"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="18625" checksum="0CBB1B6FD5B59B1A" modified="2014-02-19" version="1" fragment="single">MLTWWGKSSSKESKKKSNKESFFDTLHRKFKISSEGKLRTRSGGSRRHRNDTVSEKGDPSPTESRSPSPSKVARCQSFIERPHAQPLPLPGLHPSSVGRVDSEISISSKSRLEKGSKPSLFLPLPTPGCIRCKPNPADLDGDMVTASVFSDCSADSDEPHSHNRSPLVAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH91</accession>
    <name>V7BH91_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G140500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH91"/>
    <dbReference type="SMR" id="V7BH91"/>
    <dbReference type="STRING" id="3885.V7BH91"/>
    <dbReference type="Gramene" id="ESW16243">
        <property type="protein sequence ID" value="ESW16243"/>
        <property type="gene ID" value="PHAVU_007G140500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTKI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PDEENGC"/>
    <dbReference type="OrthoDB" id="777252at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000002">
        <property type="entry name" value="Nac domain-containing protein 86"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF210">
        <property type="entry name" value="NAC DOMAIN-CONTAINING PROTEIN 86-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="556"/>
            <end position="578"/>
        </location>
    </feature>
    <feature type="domain" description="NAC" evidence="8">
        <location>
            <begin position="4"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="288"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="399"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="427"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="402"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="436"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="588" mass="64865" checksum="E054B7FBEA63CAB7" modified="2014-02-19" version="1">MAPIGPGFRFHPTDEELVVFYLKRKITGNLSRYDHIAVVDVYKLEPWDLPPMSKLKTKDLEWYFFSVLDRKYGNGSRTNRATEKGYWKTTGKDRPVAHGDRIVGMKKTLVYHIGRAPHGRRTNWVMHEYKMLDEELTRAGTVLDVYVVCRIFEKSGSGPKNGAKYGAPLDEKEWDAEDENEQKKVVPLPETAHHVVAPLTETPHNVVSPPLPVAAAVAPPLVADDEFWNIGAFLETNDLDMELDLTDMIGNATFPSSNFHHGECSTHAENSQELIKDQEPLEGTFGISRLENGQPLDMAEQQDMGTSSVRDGDDGELSEIENLLNFNYASDNMDLDLYFDATQDLPAADDGSFLETNDLAIGNEGNPTEADPSANDMLDEYLALPDDDICNYISFDLPQIPESENSDSNQGSPLTQQTLEGETADKAVVSKHDSDAQTSKEAFSVQNREEEKLAPENSNPFVKEAYGWLASIPAAPAHAFEFPAKDITLGIHSAAQSSHTAHITTGMISITDITFRGNAMDWPMGKSGGFNTAISTEFSQPDVNCAALIPLSGKTAFVLSHGWIFLTGFSVLILSLSFKIGSMMYTGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHD2</accession>
    <name>V7BHD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transcription factor CBF/NF-Y/archaeal histone domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G195900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NFYB/HAP3 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHD2"/>
    <dbReference type="SMR" id="V7BHD2"/>
    <dbReference type="STRING" id="3885.V7BHD2"/>
    <dbReference type="Gramene" id="ESW16930">
        <property type="protein sequence ID" value="ESW16930"/>
        <property type="gene ID" value="PHAVU_007G195900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0869">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLHKYRE"/>
    <dbReference type="OrthoDB" id="386949at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016602">
        <property type="term" value="C:CCAAT-binding factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001228">
        <property type="term" value="F:DNA-binding transcription activator activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd22907">
        <property type="entry name" value="HFD_NFYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000049">
        <property type="entry name" value="Nuclear transcription factor Y subunit B-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027113">
        <property type="entry name" value="Transc_fact_NFYB/HAP3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003956">
        <property type="entry name" value="Transcrpt_fac_NFYB/HAP3_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11064">
        <property type="entry name" value="CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11064:SF175">
        <property type="entry name" value="NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00615">
        <property type="entry name" value="CCAATSUBUNTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00685">
        <property type="entry name" value="NFYB_HAP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0938">Abscisic acid signaling pathway</keyword>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="10">
        <location>
            <begin position="10"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="99"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="134"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW16930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="145" mass="16272" checksum="14641430D96CF460" modified="2014-02-19" version="1">MDQEEQDKALPIANVGRIMKQILPPSAKISKEGKQLMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDNYAETIARYLHKYRQAEREKMNHNKKYEGSATQTLNQPQLILPPPPPSLSRVTGKVQNPPTTDQSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BI62</accession>
    <name>V7BI62_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_007G249400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. BUD32 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BI62"/>
    <dbReference type="SMR" id="V7BI62"/>
    <dbReference type="STRING" id="3885.V7BI62"/>
    <dbReference type="Gramene" id="ESW17561">
        <property type="protein sequence ID" value="ESW17561"/>
        <property type="gene ID" value="PHAVU_007G249400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17562">
        <property type="protein sequence ID" value="ESW17562"/>
        <property type="gene ID" value="PHAVU_007G249400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKLYMEY"/>
    <dbReference type="OrthoDB" id="3399at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000408">
        <property type="term" value="C:EKC/KEOPS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070525">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001708">
        <property type="entry name" value="Protein kinase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000201">
        <property type="entry name" value="TP53-regulating kinase isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022495">
        <property type="entry name" value="Bud32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03724">
        <property type="entry name" value="arch_bud32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12209:SF0">
        <property type="entry name" value="EKC_KEOPS COMPLEX SUBUNIT TP53RK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12209">
        <property type="entry name" value="NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="9"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW17562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="226" mass="25152" checksum="7ADC4FF89098B8DF" modified="2014-02-19" version="1">MATETDSRDSSLTLLKQGAEARVFESSFVGRKCVVKERFSKKYRHPTLDSKLTLKRLNAEARCVTKARKLGVFTPVLYAVDPVLHTLTFEYVEGPSVKDVFLEFGSRDLGEESLDNIATQIGHAIGKLHDGGLIHGDLTTSNMLLKKGTDELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIF7</accession>
    <name>V7BIF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Neoxanthin synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G143200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIF7"/>
    <dbReference type="Gramene" id="ESW16276">
        <property type="protein sequence ID" value="ESW16276"/>
        <property type="gene ID" value="PHAVU_007G143200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVVZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNRHIVG"/>
    <dbReference type="OrthoDB" id="196782at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025461">
        <property type="entry name" value="ABA4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543:SF10">
        <property type="entry name" value="NEOXANTHIN SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543">
        <property type="entry name" value="PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14108">
        <property type="entry name" value="ABA4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="27056" checksum="7D1BA99336515F80" modified="2014-02-19" version="1">MSFSSCLSHSPLTLKAIKPCGSVGKGQNFCFSFRSNESELCNRHIVGSGRLQGNLPRVNLSGDRSFIGGSKIVVKPNATGLLPYPKRSRMQASCFIGSQLASTAFTAGTVAVLPFYTLMVLAPNSVLTKKSMESSLPYVVLGILYAYLLYLSWTPETGRLIFASKYLLPELPGIARMFSSEMTLASAWIHLLVVDLFAARHVFQDGLKNQIETRHSVSFCLFFCPIGILTHVITKAMTKPATKEGHGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJV2</accession>
    <name>V7BJV2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G024300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJV2"/>
    <dbReference type="STRING" id="3885.V7BJV2"/>
    <dbReference type="Gramene" id="ESW18237">
        <property type="protein sequence ID" value="ESW18237"/>
        <property type="gene ID" value="PHAVU_006G024300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TEVFVII"/>
    <dbReference type="OrthoDB" id="1384904at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015145">
        <property type="term" value="F:monosaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17361">
        <property type="entry name" value="MFS_STP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000002">
        <property type="entry name" value="Sugar transport protein 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044778">
        <property type="entry name" value="MFS_STP/MST-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF460">
        <property type="entry name" value="SUGAR TRANSPORT PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="171"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="283"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="319"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="348"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="388"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="428"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="452"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="26"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW18237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="512" mass="56538" checksum="819EF1A66007FB94" modified="2014-02-19" version="1">MAGGSFVSSENGRQYESKITMYVLVTCFVAAMGGLLFGYDLGITGGVTSMETFLIKFFPSVYRQMKDESNHESQYCKFNNQLLTLFTSSLYLAALVASFFASTTTRMMGRKTSMFAGGLFFLLGALINGFAVNIQMLIIGRLFLGFGVGYCNQSVPVYLSEMAPTSIRGALNIGFQMMITIGILVANLINYGTAKLESGWRISLGAGAVPAFMLCVGSLFLGDTPNSLIERGKTEAAKKMLQKIRGMDNVDEEFQALVDATEAAKDVEHPWKNITQPKYRPQLTFCSLIPFFQQFTGINVIMFYAPVLFKTLGFGNDTSLMSSVITGGVNVVATFVSIFSVDKFGRRILFLEGGIQMLICQLAVGIMIALKFGVSGEGHFSSEEATTLLFFICAYVAAYAWSWGPLGWLVPSEICSLEVRSAGQGTNVAVNMLFTFIIAQVFLPMLCHLKFGLFFFFAGFVLIMTIFVALFLPETRNVRIEEMNKVWKSHWFWSKFIPNDAVTEAHPRMTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKQ4</accession>
    <name>V7BKQ4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G254500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKQ4"/>
    <dbReference type="Gramene" id="ESW17618">
        <property type="protein sequence ID" value="ESW17618"/>
        <property type="gene ID" value="PHAVU_007G254500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LRILWIT"/>
    <dbReference type="OrthoDB" id="1410560at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF61">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="11"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="171"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="416"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="545"/>
            <end position="755"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW17618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="794" mass="90651" checksum="1845C41DF09414BF" modified="2014-02-19" version="1">MAESLLFSFAESLIGKVTSRAVKEASLALGVHSELQQMKTTMTLIRGVLLDAQQKNPLSSALSEWLRQVKRVFSDAEDIVDDFECEALRKHVVKTYGDCSRKVRHFFSTSNPLVYRLRMAHRIQDINTRLAKLAAQRSMFGLQIIDQDTRVVHVREMTHSHVNPSNVTGREHDKNQIVKLLVQDVHHQTLSVIPIVGMGGLGKTTLAKLVFNDTNIDACFPLKMWMWVCVSNDFELRNVLIKILNSAPNPTRENFNNSETEQLQNRLRNTLQGEKFLLVLDDVWNEDRARWGELKEIIDVGVEGSKILLSTRSHEIATMMHTKSSNSYLLQCLSKEDSRSLFIGEEIVKKCGGLPLALKTVGSSLFSRVDKKEWESIRDNKIWNLKQNEKGILPALKLSYDQLPSYLKPCFASFSLYKEDTDIFSSEVSVLWEALGFLPPPKEGESTIDAARQFLHELWTRSFLSDYEDLGSEYSFKLHDLVHDLATYIAKGEFETIDFHNPKISEGTQHLTFGENNFYGESLLPTGLRTMIFRKAGNNKDFLNTLVSRCKYLRILNLQYSEYESLPRCIGKLKHLRYLSLAQNKKLKELPDSICKCKLQNLQTLILIGCIKLQTLPKGIKILVSLRHLAITTTLPYFPKEVIANLTSLRTFVLFIYCCDKLELSMDIESQIPNLRLKCLGLNQLPQLVTFPQWLQGSANSLESLIVGNCINLEELPNWLPSTICLKILSICNCPNMLSLPDNMHHLTNLKDLEIIGCPELRKRLKPEVGQDWHKISHIKRVYIDESENEEESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKV3</accession>
    <name>V7BKV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MYB-CC type transcription factor LHEQLE-containing domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G258500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKV3"/>
    <dbReference type="STRING" id="3885.V7BKV3"/>
    <dbReference type="Gramene" id="ESW17665">
        <property type="protein sequence ID" value="ESW17665"/>
        <property type="gene ID" value="PHAVU_007G258500g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1421539at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="73" mass="8738" checksum="26FB43D27BDF1360" modified="2014-02-19" version="1">MYVKNTSKEGREETHDRDTVTELQHKIRMQIEESRQLQLEISRGIQEQLELQRNLQMLVQEQSKQVNETNKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BL19</accession>
    <name>V7BL19_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G227600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast stroma</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast thylakoid membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FtsZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BL19"/>
    <dbReference type="SMR" id="V7BL19"/>
    <dbReference type="STRING" id="3885.V7BL19"/>
    <dbReference type="Gramene" id="ESW17296">
        <property type="protein sequence ID" value="ESW17296"/>
        <property type="gene ID" value="PHAVU_007G227600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRFN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MGVEFWI"/>
    <dbReference type="OrthoDB" id="70257at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070938">
        <property type="term" value="C:contractile ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042802">
        <property type="term" value="F:identical protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010020">
        <property type="term" value="P:chloroplast fission"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02201">
        <property type="entry name" value="FtsZ_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1440:FF:000001">
        <property type="entry name" value="Cell division protein FtsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.20:FF:000007">
        <property type="entry name" value="Cell division protein ftsZ, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="entry name" value="Tubulin/FtsZ, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="entry name" value="Tubulin/FtsZ, GTPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00909">
        <property type="entry name" value="FtsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000158">
        <property type="entry name" value="Cell_div_FtsZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020805">
        <property type="entry name" value="Cell_div_FtsZ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045061">
        <property type="entry name" value="FtsZ/CetZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024757">
        <property type="entry name" value="FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00065">
        <property type="entry name" value="ftsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30314:SF30">
        <property type="entry name" value="CELL DIVISION FTSZ-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30314">
        <property type="entry name" value="CELL DIVISION PROTEIN FTSZ-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12327">
        <property type="entry name" value="FtsZ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00423">
        <property type="entry name" value="CELLDVISFTSZ"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00865">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="Tubulin C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="Tubulin nucleotide-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01135">
        <property type="entry name" value="FTSZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-0934">Plastid</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Tubulin/FtsZ GTPase" evidence="13">
        <location>
            <begin position="125"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin/FtsZ 2-layer sandwich" evidence="14">
        <location>
            <begin position="321"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="89"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="99"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="51109" checksum="12B8BFE20AFE919F" modified="2014-02-19" version="1">MATCVSTIVAPSNTRNSARVFTVGGRNLRGNYPGRARYLKMYDRRNGFSGGIQMSGLLEVKCSANSHGVSPYNSQGPFLDLHPEVSMLRGEGSSTLNSPRKDSSREDLSESLGPVSIQSDYNEAKIKVIGVGGGGSNAVNRMIQSSMHGVEFWIVNTDVQAIRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESRESIEEAVYGADMVFVTAGMGGGTGTGGAPIIAGIAKSMGVLTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVSEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAVQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLTGQVSITLIATGFKRQEESEGRPLQATQLNQADSNFGINRRSSSFSDGGLFEIPEFLKKKGGSRYPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLL3</accession>
    <name>V7BLL3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G279200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLL3"/>
    <dbReference type="STRING" id="3885.V7BLL3"/>
    <dbReference type="Gramene" id="ESW17918">
        <property type="protein sequence ID" value="ESW17918"/>
        <property type="gene ID" value="PHAVU_007G279200g"/>
    </dbReference>
    <dbReference type="OMA" id="MGPPEVE"/>
    <dbReference type="OrthoDB" id="1436351at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="175" mass="18762" checksum="CB485017682F6F67" modified="2014-02-19" version="1">MSSSMSTFISSSLSQTLKITTLIIPLSPHALFTSKTPSSSIFLTNTTKITMFNPHPNQVPEYPQRAPPELPSLPKIQPSPVPSEQPVFPTRDPETDPIIPPEIVTDPAPGPYPNPKPDAPKPPLTPPGIDTPLPKPPEKMPQPPPEVDPPRPPEIVPPPSTPPDITPPTGPSIFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQD6</accession>
    <name>V7BQD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G107200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQD6"/>
    <dbReference type="STRING" id="3885.V7BQD6"/>
    <dbReference type="Gramene" id="ESW19228">
        <property type="protein sequence ID" value="ESW19228"/>
        <property type="gene ID" value="PHAVU_006G107200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQP0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LENFQNY"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051058">
        <property type="entry name" value="GDSL_Est/Lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648">
        <property type="entry name" value="GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648:SF151">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="389" mass="43133" checksum="CD06EB046DF55DCA" modified="2014-02-19" version="1">MKTTTQQTKNHIFTNNSLHSCFVAMTNVLVFVFCAIISLVVAPDSVSAQPTRAFFVFGDSLVDSGNNDFLATTARADAPPYGIDFPSHRPTGRFSNGLNIPDLISLELGLEPTLPYLSPLLVGEKLLVGANFASAGIGILNDTGIQFLNIIHIYKQLKLFHEYQLRLSAHIGAEGTRNLVNRALVLITLGGNDFVNNYYLVPYSARSRQFSLPDYVRYLISEYRKVLRRLYDLGTRRVLVTGTGPMGCVPAELAMRSRTGDCDVELQRAAALFNPQLVQMLNGLNQELGSEVFIAANAYRMHMDFVSNPRAYGFVTSKIACCGQGPYNGIGLCTPASNLCPNRDLYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLTTIMELDSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS24</accession>
    <name>V7BS24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Legume lectin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G012300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS24"/>
    <dbReference type="STRING" id="3885.V7BS24"/>
    <dbReference type="Gramene" id="ESW20759">
        <property type="protein sequence ID" value="ESW20759"/>
        <property type="gene ID" value="PHAVU_005G012300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPQZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTCHASD"/>
    <dbReference type="OrthoDB" id="1101105at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010605">
        <property type="entry name" value="DUF1191"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33512">
        <property type="entry name" value="PROTEIN, PUTATIVE (DUF1191)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33512:SF1">
        <property type="entry name" value="PROTEIN, PUTATIVE (DUF1191)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06697">
        <property type="entry name" value="DUF1191"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754849" description="Legume lectin domain-containing protein" evidence="2">
        <location>
            <begin position="25"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="234"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="310" mass="34195" checksum="F5922877349DB1B0" modified="2014-02-19" version="1">MDSAFGLFLMTFSWVSFTFSGSEGQSVKSAHVLDLIIRDHTFKVLLDKNLRTAIPQSVDLPANLSGIGVDAVRFRCGSLRRYGAELKEFHLGTGVTVHPCIERVMLIRQNMGHNWSSIYYANYDLSGYQLVSPIVGLLAYNADDDANSSNPFQLGIVAGERAMTIDFTNTTKLSKEDGMKPLCASFEGDGRMTLAKGNPSTPLVCVAKRHGHFGLVVESPPDEFRNRPISRWKVAVGSTIGAALGAFLLGLLLVAMLVRVKKRSRMVEMERRAYEEEALQVSMVGHVRAPTAHGTRTTPIIEHDYRPHPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS97</accession>
    <name>V7BS97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G022400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS97"/>
    <dbReference type="STRING" id="3885.V7BS97"/>
    <dbReference type="Gramene" id="ESW20877">
        <property type="protein sequence ID" value="ESW20877"/>
        <property type="gene ID" value="PHAVU_005G022400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW71">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGFYLSK"/>
    <dbReference type="OrthoDB" id="599103at2759"/>
    <dbReference type="PhylomeDB" id="V7BS97"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005174">
        <property type="entry name" value="KIB1-4_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051304">
        <property type="entry name" value="SCF_F-box_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47123">
        <property type="entry name" value="F-BOX PROTEIN SKIP23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47123:SF15">
        <property type="entry name" value="F-BOX PROTEIN SKIP23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03478">
        <property type="entry name" value="Beta-prop_KIB1-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="21"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="41732" checksum="DEC3BF87A4571453" modified="2014-02-19" version="1">MMSVGCSSTPSSSSMADWSELPKDLLNLISQRLQNPLYLLRFRSVCSSWRSSSSSSSSSSPFPFYHSITLTPAFSLSHRSLLLINPPSTAPNHRPWLVKISHDPRARTARLFHALSRFQPKRPRFALDFLRLHALEIGREFRLSSACSSTESLYDEKLVLLPAGNDRFALITIHISGKLALFHRGDCGWTILPDMPTPYDDVCAFRGTFYAVDGNGRTVTVGLDAAVRVVAERVFGGDKKFLVECDGALMLVDLYLSTDYENLDEEDVGDMGWERTVRFDVFRLDEEVGRWVEMASLGEWVLFLGDDCAFSASAKDLGVERGNYVVFRDNGLGAVRVANGVGVFDLDDEKISPLSECPGLSELFWPPPDWVRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT78</accession>
    <name>V7BT78_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 22">Peroxidase</fullName>
            <ecNumber evidence="5 22">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_005G046000g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="19 22">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="19 22">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="19 22">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="19 22">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 22">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="22">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="5 22"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT78"/>
    <dbReference type="SMR" id="V7BT78"/>
    <dbReference type="STRING" id="3885.V7BT78"/>
    <dbReference type="Gramene" id="ESW21149">
        <property type="protein sequence ID" value="ESW21149"/>
        <property type="gene ID" value="PHAVU_005G046000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTJB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GIIQQKV"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7BT78"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF17">
        <property type="entry name" value="PEROXIDASE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 19 22" id="KW-0106">Calcium</keyword>
    <keyword evidence="14 21" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 22" id="KW-0349">Heme</keyword>
    <keyword evidence="16 22" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="13 19 22" id="KW-0408">Iron</keyword>
    <keyword evidence="9 19 22" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 22" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 22" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 22" id="KW-0964">Secreted</keyword>
    <keyword evidence="10 22" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="22">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149021" description="Peroxidase" evidence="22">
        <location>
            <begin position="23"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="23">
        <location>
            <begin position="42"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="17">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="19">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="20">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="21">
        <location>
            <begin position="52"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="21">
        <location>
            <begin position="85"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="21">
        <location>
            <begin position="134"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="21">
        <location>
            <begin position="212"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
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    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
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    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
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    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
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    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW21149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="337" mass="37384" checksum="93A4D899BF373AD6" modified="2014-02-19" version="1">MRLHYLTLFLLLVPFKLSTIYGISPQATVPNKSSKSLPPEAFLSIDHYHTTCPHAEGIISQKVAAWVKKDPTLAPAIIRLHFHDCAVRGCDGSVLLNHLGSERSALESKTLRGFQLIDDIKGELERKCPKTVSCADILTAAARDATLLVGGPFWEVPFGRKDGKISLATEANMVPHGHENITALIAFFKEKGLDILDLVTLSGSHTIGRSTCSSVMNRIYNFNGTRKPDPSLNVYFLKLLRKRCKTELDLVHLDVITPRTFDTTYYSNLKRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGEIRVNCNHVNTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTE2</accession>
    <name>V7BTE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G056400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTE2"/>
    <dbReference type="STRING" id="3885.V7BTE2"/>
    <dbReference type="Gramene" id="ESW21267">
        <property type="protein sequence ID" value="ESW21267"/>
        <property type="gene ID" value="PHAVU_005G056400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR8C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLNILFT"/>
    <dbReference type="OrthoDB" id="418748at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd18186">
        <property type="entry name" value="BTB_POZ_ZBTB_KLHL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059007">
        <property type="entry name" value="ARM_At1g04390"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044953">
        <property type="entry name" value="At1g04390-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35918:SF1">
        <property type="entry name" value="BTB DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35918">
        <property type="entry name" value="OS06G0674800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26522">
        <property type="entry name" value="ARM_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00651">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00225">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BTB" evidence="3">
        <location>
            <begin position="691"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="domain" description="BTB" evidence="3">
        <location>
            <begin position="821"/>
            <end position="902"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1011" mass="114963" checksum="9A9520A8037E8EEA" modified="2014-02-19" version="1">MKSGRDKEKQNDRCISSHMQTLHRRLLHTLNLGNRHFDEKTKRWRWQCANIEVQKNVLRSIGAFLDSLLGDARAARHAVVKESVPDILGALLWILQCKSEALLSMASTVAVKLVSVLPNPLLQSHMLDLVYCLSSLLSSHQVEVAIPCATALNFVISNLSATSEKEVMEALKEMETSFQIFGNIKDFAEGAKKIEYFEEMTLLLSTILWRWPPSRFPVCNDVILMKGLANIHTKTDSSTKLALLKLYTSIALCDSAARKLIEDEEVFPQMFVQAMGKSNPHAIRIEGFRLAQCLLRSQDNCLKVVDLCGEALVEAIICGMTETRLSSKKIGNNHGSLSVEACQLALITRWAGDHHTNFWKQGIDRVLLNLLIENIQDQLFEPVLSLEKQIYIAKEGLKGNYHLGIRSYLWDILGWLTIHCGENLNPCTHGSELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVLRAVLMMIHSPCNSISSHTRFLLSDVLKVKGMPCLKSLLHTLDYTSSLESYGSFDKLQLVVNLIGFTCLSSLPEYQRCIIESKGIKVIVLLLKRCLDNDIHIERQSFIPHLHTTCHERSCCCFDKGDWEGSNVLLFYSLLGLTEILHQCDLLRENPQQFSREVTNISPQLVSKLQEICKSSSFSPGVRWYVSYLLTYFGYYGFPTELAKRIGKSLNMEEYSDMKLVLAKGESLSVHAVILAVRCPSLLPPQLLPCRKSSKEIADNFVRETMREVRLSSHVDYEALVLLLEYVYLGCLHGSEETAKKLKILAKRCNLQPLFQMLHRHRPKWGLPFPSFNLTSSFGLAGSCFSDVILAAKSNELVRWTCNICSNTVPHMHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWQALIKLVQWFYSDELPDPPSGCLWDNMDDKEKLFNLQPYVELYWLSEFWILENIQEACWNVIMSCLDSSWRLSIKIIKMAYNLSLWKLVDISANLMAPSYRLLRDSGELEEFDDALVHLIYSASIQLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTE3</accession>
    <name>V7BTE3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_006G198200g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTE3"/>
    <dbReference type="SMR" id="V7BTE3"/>
    <dbReference type="Gramene" id="ESW20308">
        <property type="protein sequence ID" value="ESW20308"/>
        <property type="gene ID" value="PHAVU_006G198200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVPY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KDGFMGN"/>
    <dbReference type="OrthoDB" id="2015831at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001653">
        <property type="term" value="F:peptide receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033612">
        <property type="term" value="F:receptor serine/threonine kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000453">
        <property type="entry name" value="Leucine-rich receptor-like protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000276">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RCH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000234">
        <property type="entry name" value="Probable inactive receptor kinase RLK902"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000540">
        <property type="entry name" value="Receptor-like protein kinase HAIKU2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000215">
        <property type="entry name" value="Receptor-like protein kinase HSL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050647">
        <property type="entry name" value="Plant_LRR-RLKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056:SF41">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN KINASE HAIKU2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="17" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="15 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="11 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="9 22" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 21" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="22">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754714" description="non-specific serine/threonine protein kinase" evidence="22">
        <location>
            <begin position="32"/>
            <end position="968"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="609"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="23">
        <location>
            <begin position="666"/>
            <end position="958"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="694"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW20308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="968" mass="105893" checksum="0254546F82F0ED53" modified="2014-02-19" version="1">MIAGGIFRYGSAPIIPTTALLFLCLVVSSLSDELQPLMKFKSSLQSSNASVFSSWAPEKSPCLFTGIVCNFKGFVSEINLPQKQLEGAVPFDSLCELQSLEKISLGSNNLSGSISEGLRKCTNLKHLDLGVNSFNGEMPDLSSLHKLEFLNLNSSGISGVFPWKSLGNLTSLEFLSLGDNLLKENPFPLEVLKLEKLYWLYLTNCSITGNIPLGIGNLTQLQNIELSDNHLYGEIPADIVKLRKLWQLELYDNFLSGKIPVGFGNLTSLVNFDASFNQLEGDISEVRSLKNLASLHLFVNKLSGEIPKELGDLKNLIELSLYANNLTGPLPQNLGSWEGIQYVDVSDNFLSGPIPPLLCKNNQINLLALLNNSFNGTIPETYAKCTSLVRFRLSRNSLSGVVPSGIWGLPNLVIFDLAMNQFEGPVTSDIVKAKSLAQLLLSNNKFAGELPMEISEASSLVSIQLSSNQISGHIPETIGNLKKLTTLTLDGNNLSGVVPDSIGSCTSLNEINLAGNSLSGAIPSSIGSLPTLNSLNLSSNRLSGEIPSSLSSLRLSLLDLSNNQLFGSIPELLCISAFKDGFMGNPGLCSQTLKGIRPCSMQSRRSSRVRNLLVCLVAAVMVLLGAFFLYTKLRQNKFEKPMKTTSWDVKQYHVLNFNESEIVHGIKAENLIGKGGSGSVYRVVLKGGAEFAVKHIWTSNLSDRGSCRSTSAMLRRSSRSPEFDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPKGSLWDRLHTCNKKSEMGWEVRYDIALGAATGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLAKILNGGAGNWTNVIAGTLGYIPPEYAYTCKVTEKSDVYSFGVVLMELVTGKRPMEAEFGENHDIVHWVCSTNRSKEEALELVDPTIAKHFKEDAMKVLRIALLCTSKIPASRPSMRMLVQMLEEADPCTPNQMTVTIDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTM5</accession>
    <name>V7BTM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Nitronate monooxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G205400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTM5"/>
    <dbReference type="SMR" id="V7BTM5"/>
    <dbReference type="STRING" id="3885.V7BTM5"/>
    <dbReference type="Gramene" id="ESW20395">
        <property type="protein sequence ID" value="ESW20395"/>
        <property type="gene ID" value="PHAVU_006G205400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQW7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IDDLPSC"/>
    <dbReference type="OrthoDB" id="10265891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018580">
        <property type="term" value="F:nitronate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046686">
        <property type="term" value="P:response to cadmium ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd04730">
        <property type="entry name" value="NPD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004136">
        <property type="entry name" value="NMO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32332">
        <property type="entry name" value="2-NITROPROPANE DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32332:SF20">
        <property type="entry name" value="2-NITROPROPANE DIOXYGENASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03060">
        <property type="entry name" value="NMO"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51412">
        <property type="entry name" value="Inosine monophosphate dehydrogenase (IMPDH)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0288">FMN</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW20395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="336" mass="35824" checksum="91EC53F38CEEE200" modified="2014-02-19" version="1">MNLGSKMGWRGILGFEYGIVQAPLGPDISAPHLVAAVANAGALGLLRAPDWESPDYLRGLIKTTRTLTDKPFGVGVVLAFPFEENLKVILEEKVAVLQISWGDCTTELVNKAHAAGVKVVPQVGNIEGAKQAIEAGVDGIIVQGLEAGGHVLGQDGLITLVSRVVDLVGDREIPVIAAGGIVDSRGYVAALALGAQGVCLGTRFLATEESNAHSTYKRKLVELDETAYTDVFGRARWPGAPHRVLQTPFYKEWRSLPAHENETNQPIIGHSTINGVDKDIRRFAGTVPNMTTTGDLESMVMFAGEGVGLIKEILPAGEVVKQLVEGAQLIIQQNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXC5</accession>
    <name>V7BXC5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ALA-interacting subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G170000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the CDC50/LEM3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXC5"/>
    <dbReference type="SMR" id="V7BXC5"/>
    <dbReference type="STRING" id="3885.V7BXC5"/>
    <dbReference type="Gramene" id="ESW22642">
        <property type="protein sequence ID" value="ESW22642"/>
        <property type="gene ID" value="PHAVU_005G170000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2952">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AHIRECK"/>
    <dbReference type="OrthoDB" id="340608at2759"/>
    <dbReference type="PhylomeDB" id="V7BXC5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005045">
        <property type="entry name" value="CDC50/LEM3_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10926:SF72">
        <property type="entry name" value="ALA-INTERACTING SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10926">
        <property type="entry name" value="CELL CYCLE CONTROL PROTEIN 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03381">
        <property type="entry name" value="CDC50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015840">
        <property type="entry name" value="DUF284_TM_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="301"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR015840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="343" mass="39111" checksum="7ACA11D16CF7266B" modified="2014-02-19" version="1">MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVEEVVLQYDESCLPTSHANDAVAYIQSDSTNKTCVTKWTVEHRMEAPVYVYYQLDNYYQNHRRYVKSRNDKQLWSKANEGETLNCYPEDKTNEKETIVPCGLIAWSMFNDTYKFVSNNKNLTVNRKNIAWGSDRRSRFGSDVYPKNFQNRDLIGGGRLNESIPLNEQEDLIVWMRTAALPTFRKLYGKIEVDLEMKDEIEIVIENNYNTYMFGGTKKVVLSTTSLMGGRNPFVGTAYLSVGGLSLFCTIIFILLYVIKPRPIGDPSYLSWNKNPVGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ61</accession>
    <name>V7BZ61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Core Histone H2A/H2B/H3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G149600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the histone H3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ61"/>
    <dbReference type="SMR" id="V7BZ61"/>
    <dbReference type="STRING" id="3885.V7BZ61"/>
    <dbReference type="Gramene" id="ESW22388">
        <property type="protein sequence ID" value="ESW22388"/>
        <property type="gene ID" value="PHAVU_005G149600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1745">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTNRCAR"/>
    <dbReference type="OrthoDB" id="1379193at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005654">
        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22911">
        <property type="entry name" value="HFD_H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000001">
        <property type="entry name" value="Histone H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000164">
        <property type="entry name" value="Histone_H3/CENP-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11426">
        <property type="entry name" value="HISTONE H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00622">
        <property type="entry name" value="HISTONEH3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00428">
        <property type="entry name" value="H3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00959">
        <property type="entry name" value="HISTONE_H3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0007">Acetylation</keyword>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="5">
        <location>
            <begin position="18"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW22388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="110" mass="12572" checksum="4134E52F39E48E71" modified="2014-02-19" version="1">MLRPSCKRTGVKVCEGRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C044</accession>
    <name>V7C044_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G056900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C044"/>
    <dbReference type="STRING" id="3885.V7C044"/>
    <dbReference type="Gramene" id="ESW23552">
        <property type="protein sequence ID" value="ESW23552"/>
        <property type="gene ID" value="PHAVU_004G056900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRHX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AWNGPEN"/>
    <dbReference type="OrthoDB" id="10044893at2759"/>
    <dbReference type="PhylomeDB" id="V7C044"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050648">
        <property type="entry name" value="F-box_LRR-repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13382:SF22">
        <property type="entry name" value="F-BOX PROTEIN SKIP14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13382">
        <property type="entry name" value="MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="219"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="498" mass="55826" checksum="F68E6A02F37FA07E" modified="2014-02-19" version="1">MAFDSSKESRFLIPQEKNLCPSNGSVLDDHLIDSCGCFGSSCCLCCFNGNLEGETCFDLDYVKGVVDDDEEEEDDDDVLDRLPVDPFELDIESTLAAFSDWIEDIEWDFRPEDVEFGVGETHEMRGDRDHLHFLGLSWAWNGPENLQPQGVSSRENEMSVSGDIFKTYQNFDGVFGGGIVAEGSAGGVLTVKHDDNLVLSTEAVQNGTKIECDAERGDPHDALFFVLGYLGVQDLLSVERVCRSLRDAVKGDPLLWRTVQINQQLNEKITDDTLVKLTNRAQGTLQCLILVNCLWITDSGLRSVLQSNTGLIKLSVPDCIRITMEGILFNLRALKSSGKSGIKHLRIGGLAGMCHVTDQQFEELKELLDAGKHLQQREQKPQFYCREYSHILCDDGRQIDIDVCPKCKKVRPIYDCPAESCQQKHLAAQLCRGCTVCITRCVHCGRCIKDIYEETFCLDSLCLNCLDQFLHYPGKGEKEGAECTIIRERTMYQFCLYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0A0</accession>
    <name>V7C0A0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G143800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0A0"/>
    <dbReference type="STRING" id="3885.V7C0A0"/>
    <dbReference type="Gramene" id="ESW22316">
        <property type="protein sequence ID" value="ESW22316"/>
        <property type="gene ID" value="PHAVU_005G143800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RSQC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMGGIFN"/>
    <dbReference type="OrthoDB" id="758104at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044257">
        <property type="entry name" value="TRM32-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47071">
        <property type="entry name" value="PROTEIN TRM32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47071:SF2">
        <property type="entry name" value="PROTEIN TRM32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4378" evidence="2">
        <location>
            <begin position="595"/>
            <end position="754"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="565"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="573"/>
            <end position="583"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="758" mass="87518" checksum="1CFF1B47F3C3B53F" modified="2014-02-19" version="1">MGKDVISSDQTAIQIQDNNPGCMWGMLKILDYHRWRVKKVFPQKRRRHVTYKRKSILYDQLEDQQDGVSEAEPLLVRQHSEKLHAADKSSPKYRQKEARTGKKFDKENSKGNKAYSRKNQDSSEYALHLEKDGKTTEASLDHKPTDSSYNFEKHSDVFEFLRVEKDLLLKFLRDMDFSGKKLHQPSQTKARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEFFFAGTQESNMSVSSVKKDVSYEKPLTLVSDLGVDSAMKQKAIISSKSSQESNHRGWNQLVLHQFKAIKQKIKHALVEFRKSSYQTSAEAIHHRASPEYSIINNDEEISRTLEDGVVQEYKRSKSSNETKASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWQSSKSKSLKLTHEDKIHKSAHVPKFSRSNFSMPNLETLGFIVQEALFNTNDIGTEETYDRVHRKSVSLPLKMDKSLDNFKEAEIVETDKILEKIDEVTYDQKEDMDEPAVGDGCFTQEKEEMSNMTAYLSKEVTPTLETSSEDNITSHAEGTELYTRVSTLEELETDLSDKGSVWPDSSSNRNASVVTAEDTDYPSNFKYVKKVLEYSGFLGNEHTQMRYTIDQPLKPSLFKDLDESLSHEIEPSEEETMNPYDHQLIFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHPMPKGRYLLNEVWSSVNSYMTLRPELDQTLDDVVGRDLAKGRGWMILQEEEEYVGLELEEMIMDDLLDEFMFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C345</accession>
    <name>V7C345_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_004G143500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HD-ZIP homeobox family. Class IV subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C345"/>
    <dbReference type="STRING" id="3885.V7C345"/>
    <dbReference type="Gramene" id="ESW24592">
        <property type="protein sequence ID" value="ESW24592"/>
        <property type="gene ID" value="PHAVU_004G143500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQXM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHPGNCI"/>
    <dbReference type="OrthoDB" id="6159439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08875">
        <property type="entry name" value="START_ArGLABRA2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.530.20:FF:000026">
        <property type="entry name" value="Homeobox-leucine zipper protein GLABRA 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000229">
        <property type="entry name" value="Homeobox-leucine zipper protein HDG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042160">
        <property type="entry name" value="HD-Zip_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057993">
        <property type="entry name" value="HD-Zip_IV_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002913">
        <property type="entry name" value="START_lipid-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654:SF1">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25797">
        <property type="entry name" value="PDF2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01852">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00234">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50848">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0371">Homeobox</keyword>
    <keyword evidence="8 9 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="12">
        <location>
            <begin position="22"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="START" evidence="13">
        <location>
            <begin position="214"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="9">
        <location>
            <begin position="24"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="641"/>
            <end position="661"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="10"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="23"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW24592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="715" mass="78888" checksum="4ADAACB227397077" modified="2014-02-19" version="1">MEYGSGSPGDLHHHHDGSSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRMQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNSALRQENDKIRCENIAIREALKNVICPSCGGPPINDDCYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGSFASQGLGGPSLDLDLLPGSSSSMPNVPSFQPACLSDMDKSLMSDIASSGMEEMIRLLQTNEPLWMKGADGRDVLDLDTYERMFPKANGHMKNPNVHVEASRDSGVVIMNGLTLVDMFMDPNKWMELFPTVVTTARTIEVISSGMMGGHSGCLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQFAPQFRSHRLPSGVFIQDLPNGYSKVTWIEHVEVEDKTPVHRLYRNMIYSGIAFGAQRWVTTLQRMCERIACLMVTSNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRWTTLSGSGMNEIGVRVTVHKSTDPGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQWDVLSNGNAVQEVAHIANGAHPGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGQGEQDGGGASTSTSSGRVMGGSGGSLITVAFQILVSSLPSAKLNFESVTTVNSLIGNTVQQIKAALNCPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C461</accession>
    <name>V7C461_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G173100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C461"/>
    <dbReference type="STRING" id="3885.V7C461"/>
    <dbReference type="Gramene" id="ESW24934">
        <property type="protein sequence ID" value="ESW24934"/>
        <property type="gene ID" value="PHAVU_004G173100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S708">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1435758at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009424">
        <property type="entry name" value="AGP16/20/22/41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33374">
        <property type="entry name" value="ARABINOGALACTAN PROTEIN 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06376">
        <property type="entry name" value="AGP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="11723" checksum="C3203A16F9CC81B0" modified="2014-02-19" version="1" fragment="single">QSVFIFAKILTTKPIFTAFHSFSLSLSLSSSLINHSTNLTLSPAIAMEMFRLQHFFISIIALALASLPPSINAQLLPPAPAPTSDGIAVDQGVAYVLMLLALVLTYIIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5E6</accession>
    <name>V7C5E6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G028000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5E6"/>
    <dbReference type="SMR" id="V7C5E6"/>
    <dbReference type="STRING" id="3885.V7C5E6"/>
    <dbReference type="Gramene" id="ESW25344">
        <property type="protein sequence ID" value="ESW25344"/>
        <property type="gene ID" value="PHAVU_003G028000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GQTQRKQ"/>
    <dbReference type="OrthoDB" id="1908613at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044787">
        <property type="entry name" value="HHO5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058673">
        <property type="entry name" value="HHO5-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003:SF44">
        <property type="entry name" value="MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26575">
        <property type="entry name" value="HHO5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="209"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="84"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="178"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="342"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="88"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="199"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="351"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="373" mass="41398" checksum="482F0287184B404D" modified="2014-02-19" version="1">MLPLKMGFREYIEALEEERRKIQVFPKELPLSLELVTQAIEGCRQQLSGTVTEYNLNGQSECSEQTSTDEGPVFEEFIPIKKMASQDSVEEEEEEENEDEVEDEQHSHQHRKTTSDKRKSDWLRSVQLWNPNPPPTKEDVPRKANVVEVKRNGGAFQPFQREEKSGVVDGKVNNYASAIGKAPSSPPVPATSSTGPVRIDSKKEEKGQAQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIMHNNASSQAAPLFLVGNIFVQPPEYGAVATSSASGGELTTVTAPTGIYAPVAAHPPPVTNTPIMKHLHSQERPHNHHSAQSNSPASSSSTHTITTTSCAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5S6</accession>
    <name>V7C5S6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G152300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5S6"/>
    <dbReference type="Gramene" id="ESW24698">
        <property type="protein sequence ID" value="ESW24698"/>
        <property type="gene ID" value="PHAVU_004G152300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LKAWTFE"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="210"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="291"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="325"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="354"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="393"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="430"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="466"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="507"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="550"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="583"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="610"/>
            <end position="632"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="639"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW24698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="639" mass="69397" checksum="910BE8D860AB3E4D" modified="2014-02-19" version="1" fragment="single">MVSLCCSLESWTFEIIVILSGALANPKLQTSVLSICTRISNELGAGSSKAAYLALKVTMFLAFLVGLSEFSVLMSLWKVWGRAFTNVHEVLTHVISMMPILATSVFINSFQTAFQGVARGCGWQKLGAFINLGSFYCLGVPLSIVSAFVFHLKAKGLYLGIVLALTVQVVCFLLVTLRANWEKEVSFLGRKSRMKGVTRQKVMEEMKKQLWLAGPLFTVGVLQYSMQVISVMFVGHLGEVPLSGASLATSFASVTGFNLLMGMASALDTLCGQSFGAGQHHMVGIHMQRAAFVLLFVSVFLAIMLVFTKHILVAMHQQVAIAEEAGVYALYLIPSLFAYGIFQCQLKFLQTQNIVFPMVLSSALVASLHIPLCWLLVTKSGFGSKGAAIENSVSYWINVLLIGLYVKFSSSCEKSRTGFSKKALQNIPEFLKISIPSACMLCLKAWTFEIMVLLSGLLPNPQLETSVLSICLNTFVLAWMIPFGLSSAACTRVSNELGAGNPQAASLAVRVALCVVLAEGIIMVLLMILLRKIWGNLYSSETEVVDYVAAMMPFLAICSFLDGIQSVLSGIARGSGWQKIGAIVNLGSFYFVGVPSAVVLGFVLHMKGKGLWLGIVSAFMVQVILFGVIITIRTSWEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6A9</accession>
    <name>V7C6A9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GAE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G0533000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">Clathrin-coated vesicle membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6A9"/>
    <dbReference type="STRING" id="3885.V7C6A9"/>
    <dbReference type="Gramene" id="ESW25643">
        <property type="protein sequence ID" value="ESW25643"/>
        <property type="gene ID" value="PHAVU_003G0533000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25644">
        <property type="protein sequence ID" value="ESW25644"/>
        <property type="gene ID" value="PHAVU_003G0533000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1062">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YSPSIRW"/>
    <dbReference type="OrthoDB" id="996157at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030665">
        <property type="term" value="C:clathrin-coated vesicle membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030117">
        <property type="term" value="C:membrane coat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1230:FF:000008">
        <property type="entry name" value="AP-1 complex subunit gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050840">
        <property type="entry name" value="Adaptor_Complx_Large_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008152">
        <property type="entry name" value="Clathrin_a/b/g-adaptin_app_Ig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013041">
        <property type="entry name" value="Clathrin_app_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008153">
        <property type="entry name" value="GAE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22780">
        <property type="entry name" value="ADAPTIN, ALPHA/GAMMA/EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02883">
        <property type="entry name" value="Alpha_adaptinC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00809">
        <property type="entry name" value="Alpha_adaptinC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49348">
        <property type="entry name" value="Clathrin adaptor appendage domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50180">
        <property type="entry name" value="GAE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GAE" evidence="8">
        <location>
            <begin position="425"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="357"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="373"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="545" mass="59819" checksum="A17E9B0B8C6A641F" modified="2014-02-19" version="1" fragment="single">YVGLNMLIKAITVDAQAVQRHRATILECIKDSDASIRKRALELVCILVNETNVKALTMVLVDYLEVSDPDFRVDLTEKICSIVSKYSSEKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASELHGYTVRALYQAFQRSAEQETLVRVAVWCIGEYGDFLINNVGMLDVEDPITVTESDVVRVVEIALKRHSSDLTTKAMALVSLLKLSSRFPSRSERIREIVVQYKGNFVLELQQRSIEFNLIITKHQNIRPTLVDRIPVLDEATFIARRAGSLPDAASTRTNGVAKAVSPIVDLLDINSDDAPVPSSSGGDLLHDLLGVDLSLPSQQSDASQASKNGPDVLLDLLCIGSPSAPTELPAQRNSSEMDILSPKPSKKAPVSPLDDLASLSLSSRATLNAGAAPLMDSLDGFAPSPPTEENNELVYPSITAFESGSLRLVFNFSKQPGNLQTTNIQATFTNLTSNVYTDFVFQAAVPKFLQLHLDPASGNILTASGKESIKQNMRLTNCQHGKKPLVMRIKVAYKINGKETLEEGQISNFPREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8T0</accession>
    <name>V7C8T0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Gluconokinase</fullName>
            <ecNumber evidence="3 9">2.7.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G054200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>D-gluconate + ATP = 6-phospho-D-gluconate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19433"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18391"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58759"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Carbohydrate acid metabolism; D-gluconate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the gluconokinase GntK/GntV family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.12" evidence="3 9"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8T0"/>
    <dbReference type="SMR" id="V7C8T0"/>
    <dbReference type="STRING" id="3885.V7C8T0"/>
    <dbReference type="Gramene" id="ESW25655">
        <property type="protein sequence ID" value="ESW25655"/>
        <property type="gene ID" value="PHAVU_003G054200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3354">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YEGDDYH"/>
    <dbReference type="OrthoDB" id="275177at2759"/>
    <dbReference type="UniPathway" id="UPA00792"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046316">
        <property type="term" value="F:gluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02021">
        <property type="entry name" value="GntK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000522">
        <property type="entry name" value="Gluconokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006001">
        <property type="entry name" value="Therm_gnt_kin"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01313">
        <property type="entry name" value="therm_gnt_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43442">
        <property type="entry name" value="GLUCONOKINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43442:SF3">
        <property type="entry name" value="GLUCONOKINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13671">
        <property type="entry name" value="AAA_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="193" mass="21726" checksum="945617EAF6827D12" modified="2014-02-19" version="1">MASNDGAVIVVMGVSGAGKTTIGRRLEKEMQYKYLDADDFHSELNKEKMRMGIPLTDEDRMPWLKALRDVINEYLDNKKGLILGCSALKNQYREMLRSGYPAYKLGTYASPVNFILLDAPAEVLSVRVKARAAEGKHYMPASLLQSQIDLLQVDHCEGILKVDATLIPQTIVNTILNMLHFQGCFHHDCIEFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBR6</accession>
    <name>V7CBR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ACT domain-containing protein ACR</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Protein ACT DOMAIN REPEATS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G216100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds amino acids.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBR6"/>
    <dbReference type="Gramene" id="ESW27599">
        <property type="protein sequence ID" value="ESW27599"/>
        <property type="gene ID" value="PHAVU_003G216100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS10">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPTATIV"/>
    <dbReference type="OrthoDB" id="2019938at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04895">
        <property type="entry name" value="ACT_ACR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04897">
        <property type="entry name" value="ACT_ACR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040217">
        <property type="entry name" value="ACR1-12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096:SF6">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24931">
        <property type="entry name" value="ACT_ACR9_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="34"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="115"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="324"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="441" mass="49374" checksum="74063FA4499B0024" modified="2014-02-19" version="1">MEWPACTDEYEKLVIRMTTPRVVIDNAVCSTATIVKVDSGRKNGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDQSVLSYIEQSLGGIHSGNTKVLNGLTILELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEARLRNVLKGDNDIRSAKTSITNAVVHTERKLHQMMYTDRDYQRNPIFNFTSDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHGTVKTTVDKAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDKTSNVFYVTDAIGYPADPKIIESVRQKVGSCNLKVKELPLVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCA8</accession>
    <name>V7CCA8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Zinc finger LSD1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G230100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCA8"/>
    <dbReference type="STRING" id="3885.V7CCA8"/>
    <dbReference type="Gramene" id="ESW27764">
        <property type="protein sequence ID" value="ESW27764"/>
        <property type="gene ID" value="PHAVU_003G230100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY0V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCAICNA"/>
    <dbReference type="OrthoDB" id="5594417at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040319">
        <property type="entry name" value="LSD1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005735">
        <property type="entry name" value="Znf_LSD1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01053">
        <property type="entry name" value="LSD1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31747:SF1">
        <property type="entry name" value="PROTEIN LOL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31747">
        <property type="entry name" value="PROTEIN LSD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06943">
        <property type="entry name" value="zf-LSD1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="Multiheme cytochromes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Zinc finger LSD1-type" evidence="3">
        <location>
            <begin position="28"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="domain" description="Zinc finger LSD1-type" evidence="3">
        <location>
            <begin position="67"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Zinc finger LSD1-type" evidence="3">
        <location>
            <begin position="105"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="15523" checksum="C38C43C48F33A0C1" modified="2014-02-19" version="1">MPVPLAPYPAPTAPYTPPANGAQSQLVCSGCRNLLMYPAGATSVCCAVCNAVTGVPPPGTEMAQLVCGGCHTLLMYIRGATNVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGATASTTEQKFNTVTIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCG1</accession>
    <name>V7CCG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G168200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Potential calcium sensor.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCG1"/>
    <dbReference type="SMR" id="V7CCG1"/>
    <dbReference type="STRING" id="3885.V7CCG1"/>
    <dbReference type="Gramene" id="ESW27038">
        <property type="protein sequence ID" value="ESW27038"/>
        <property type="gene ID" value="PHAVU_003G168200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLTSECM"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043226">
        <property type="term" value="C:organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000178">
        <property type="entry name" value="Calmodulin-2 A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000089">
        <property type="entry name" value="calmodulin-like protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="61"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="97"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="152"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="190"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW27038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="25332" checksum="E1F39A0557E1DAD9" modified="2014-02-19" version="1">MDLATLLLAVVFIAGLINIFFHVPNNKITTCLQNFLPNNVFKTKTTLAPPPTTKEEHGSSRKKKELERVFSTFDKNGDGFITKQELRESLRNIGIFMTEKEVDDIVVKYDSNGDGLIDLEEFCLLTSECMGGNKEGGGEKEGGVGMEGEEEDEEVNLKEAFDVFDKDNDGLISVEELALVLTSLGLNEGRKTEECKEMIKKVDMDGDGMVNFKEFKRMMMKGPKLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCK1</accession>
    <name>V7CCK1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Equilibrative nucleoside transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G166000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCK1"/>
    <dbReference type="SMR" id="V7CCK1"/>
    <dbReference type="Gramene" id="ESW27010">
        <property type="protein sequence ID" value="ESW27010"/>
        <property type="gene ID" value="PHAVU_003G166000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1479">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARGMNEF"/>
    <dbReference type="OrthoDB" id="1856718at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005337">
        <property type="term" value="F:nucleoside transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002259">
        <property type="entry name" value="Eqnu_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOSIDE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10332:SF77">
        <property type="entry name" value="EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01733">
        <property type="entry name" value="Nucleoside_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="ENT"/>
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    </dbReference>
    <dbReference type="PRINTS" id="PR01130">
        <property type="entry name" value="DERENTRNSPRT"/>
    </dbReference>
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    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="122"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="279"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="340"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="373"/>
            <end position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00007965"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW27010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="398" mass="43728" checksum="6AB875A7A9DEB907" modified="2014-02-19" version="1">MEAVKLVSSDPSERPDTYRVAYIIHFLLGAGNLLPWNALITAVDYFAYLYPTKHIERVFSVAYMISSVMVLLGMISWGGWSKTTLRLRMNLGFSMFVMSLMVAPVIDWTSSSTKLNERPSGAYGLTVAAVVICGLADGLVGGSLIGSAGKLPKQYMQAVFAGTASSGIIISILRIITKASLPQTPKGLKISAHLYFMVATIFLLFCIVLSNLQHKLPVMHQHHQSVHQESTLCTGTKFWAVAGKIKGAAFGIFIIYIVTLSIFPGFIAEDLESKLLRDWYPILLITVYNLADLMGKSLTAFYVIQSMKRAIWAATSRLLFYPLFVICLHGPKWLKTEVPMVVLTFLLGFSNGYLTSVLMILTPKSVPLSEAELSAIVMTGFLGFGLVGGSVLGWFWIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCM8</accession>
    <name>V7CCM8_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">PHAVU_003G174600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
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        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="gene ID" value="PHAVU_003G174600g"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome 3"/>
    </dbReference>
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        <property type="entry name" value="STRESS INDUCED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="121" mass="13809" checksum="495FBC296C2A7E34" modified="2014-02-19" version="1">MAEEESTPGSPHSFKNRLRSSLCFSCCFPHHRVRPKIVRSASLNNKPRSSDFPFPHLKEKCCNFINRIGGRHRRRHSADFRYDALSYALNFEDDASDERSVDDLKSFSARLPASPPSKTSP</sequence>
</entry>
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    <accession>V7CE02</accession>
    <name>V7CE02_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PHAVU_003G279700g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>eudicotyledons</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>indigoferoid/millettioid clade</taxon>
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        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_003G279700g"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8611" checksum="A7454052C6776AC0" modified="2014-02-19" version="1">MGDLDLNLEVPDTFFETWKEFASCQVASSIGCFYSKKCLTTNSSSVEILFMFLLSIAPSFLFYVDDQHSVLNACFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEW1</accession>
    <name>V7CEW1_PHAVU</name>
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            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
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        </recommendedName>
    </protein>
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    </gene>
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        <name type="common">Kidney bean</name>
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        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEW1"/>
    <dbReference type="Gramene" id="ESW27908">
        <property type="protein sequence ID" value="ESW27908"/>
        <property type="gene ID" value="PHAVU_003G242800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEELMIL"/>
    <dbReference type="OrthoDB" id="21204at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16469">
        <property type="entry name" value="RING-H2_RNF24-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045191">
        <property type="entry name" value="MBR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF165"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937:SF163">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="168"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="219"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="243" mass="26614" checksum="20F47758560C4E95" modified="2014-02-19" version="1">MQLLPGIVGNGAIVSNAGANTYYPLSNHASSSTWVPPLGSRGMHYPAAESSPVSWNHHGFISPAIPPTVIHEPAFPLPQFPSEETRRRLPNEVRSILDSLRYGQALRFEELMILDYSLVLRAFEIEHPELFGTSPSSGLSLETIAQYMDNETFLVDDGDDSEENKEKCPICLEEFKNGEEIGKLHSCVHKFHLDCIKTWLNRKNLCPVCRRTALETQNDQNAGGRAGAGAGAGAVVNGEGGRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFJ4</accession>
    <name>V7CFJ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G028300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFJ4"/>
    <dbReference type="SMR" id="V7CFJ4"/>
    <dbReference type="STRING" id="3885.V7CFJ4"/>
    <dbReference type="Gramene" id="ESW28914">
        <property type="protein sequence ID" value="ESW28914"/>
        <property type="gene ID" value="PHAVU_002G028300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YIFVASM"/>
    <dbReference type="OrthoDB" id="6339427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000025">
        <property type="entry name" value="probable polyol transporter 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050814">
        <property type="entry name" value="Myo-inositol_Transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020">
        <property type="entry name" value="PROTON MYO-INOSITOL COTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020:SF49">
        <property type="entry name" value="SUGAR TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="66"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="95"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="117"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="153"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="285"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="323"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="352"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="387"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="424"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="450"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="30"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="493" mass="53423" checksum="CEC2BD8187085282" modified="2014-02-19" version="1">MSSEDKNTDGQEFMENGDSNTRLNKYACASALAASIVSAMFGYVTGVMSGALIFIQEDLKISDLQIQLLVGMSHLCALPGSLIAGRTADYLGRRYTIIIASIAFLSGSIIMGCGQPYPILMVGNCIVGVGVSFAMVVAPLYSAEISPPSSRGFFTSLPTLSVNTGFLLGYMSNYFFGKLSLRLGWRIMVAVPAAPSLCLILLMLKLVESPRWLVTQGRVGEARKVLLLVSNAKEEAEQRLKEIKDVVGVDGSCTLDTVEVPKKTSSGTGALKELFCEASPLVRRILIAAVGLHLFLRIGGSAVILLYSPRVFARTGITDKSTLMLATVGIGVSKVAFAFISIFLSDKFGRKILLLISAVGLSMTMLGLGICLTIVEHSKEKLFWAPYLTVILTYIFVASMSIGIAPVTWVYSSEIFPLRYRAQGLSVCVIVNRISTVVVVTSFISIYKAITMGGIFFMFSCINVVALLFYSSLPETKGRSLEDMETVFQRNYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFT7</accession>
    <name>V7CFT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Cellulose synthase-like protein D3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G040200g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFT7"/>
    <dbReference type="SMR" id="V7CFT7"/>
    <dbReference type="STRING" id="3885.V7CFT7"/>
    <dbReference type="Gramene" id="ESW29062">
        <property type="protein sequence ID" value="ESW29062"/>
        <property type="gene ID" value="PHAVU_002G040200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU14">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KKHASMA"/>
    <dbReference type="OrthoDB" id="72851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051753">
        <property type="term" value="F:mannan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009409">
        <property type="term" value="P:response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000229">
        <property type="entry name" value="Cellulose synthase-like protein D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000040">
        <property type="entry name" value="cellulose synthase-like protein D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14570">
        <property type="entry name" value="zf-RING_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="283"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="316"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="917"/>
            <end position="940"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="952"/>
            <end position="973"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1050"/>
            <end position="1072"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1078"/>
            <end position="1096"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="1108"/>
            <end position="1128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="415"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="847"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="379"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="385"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="386"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="415"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="607"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="608"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="632"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00061286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW29062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1144" mass="127999" checksum="F513411F013EA50C" modified="2014-02-19" version="1">MASKMFRASRSSISTSSDGAPDGQKPPLPPSVQFGRRTSSGRYVSYSRDDLDSEIGSTDFMNYTVHIPATPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEASHPQMAGAKGSSCAVPGCDSKVMSDERGADILPCECDFKICRDCYIDAVKTGGGTCPGCKESYKNTELDEVAADNGHPLQLPPPGGMSKMERRLSLMKSTKSVLMRSQTGDFDHNRWLFETKGTYGYGNAIWPKQGGFGNEIENDVVEPTELMNRPWRPLTRKLKIPAAILSPYRLIIFIRLVVLALFLAWRVKHQNTDAVWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPNNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANAWVHFCRKHDIEPRNPESYFSLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKVQRQNREDEPLETAKIPKATWMADGTHWPGTWLNPTSEHSKGDHAGIIQVMLKPPSDEPLPGSADDTSLIDQTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKEHATGCCNCCFGRQKKHASMASTPEENRALRMGDSDEEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHSAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGNRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSNQIGGSFQFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFV7</accession>
    <name>V7CFV7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alkyl transferase</fullName>
            <ecNumber evidence="3">2.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G269600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UPP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFV7"/>
    <dbReference type="SMR" id="V7CFV7"/>
    <dbReference type="STRING" id="3885.V7CFV7"/>
    <dbReference type="Gramene" id="ESW28228">
        <property type="protein sequence ID" value="ESW28228"/>
        <property type="gene ID" value="PHAVU_003G269600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1602">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DFRAPHF"/>
    <dbReference type="OrthoDB" id="4173905at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045547">
        <property type="term" value="F:ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016094">
        <property type="term" value="P:polyprenol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00475">
        <property type="entry name" value="Cis_IPPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="entry name" value="Decaprenyl diphosphate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01139">
        <property type="entry name" value="ISPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018520">
        <property type="entry name" value="UPP_synth-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00055">
        <property type="entry name" value="uppS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291:SF43">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="Undecaprenyl diphosphate synthase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01066">
        <property type="entry name" value="UPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="88"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="41163" checksum="B51E036EE45CC555" modified="2014-02-19" version="1">MQKNTGNIIGQFFGGLNCYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKKNMEEGDGHKAGFNVLTSILRYCYELGVKYVTVYAFSIDNFKRKSEEVQSLMELMRKKIEELLQQESLINEYGVRLHFIGEMQLLTEPVRAAVERAMRVTAHNNQRVLLICVAYTSRQEIVHAVQECCKEKLNEVQALKEVKVTNGAFSRIDQGLNGNDFDLLSQDSCKDYLKAIKACSSEVESAARKDGLFENNVENHIGDYPEAEMTSYNGLVEITEDRKNKQDEVPFIKLADIEKNMYMAVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPTALWPEIGLRHLIWAVLNFQRHYFYLEKKKKQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIC1</accession>
    <name>V7CIC1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G038500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Nucleoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nuclear pore complex</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIC1"/>
    <dbReference type="SMR" id="V7CIC1"/>
    <dbReference type="STRING" id="3885.V7CIC1"/>
    <dbReference type="Gramene" id="ESW29035">
        <property type="protein sequence ID" value="ESW29035"/>
        <property type="gene ID" value="PHAVU_002G038500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2020">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMERTTA"/>
    <dbReference type="OrthoDB" id="27218at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031965">
        <property type="term" value="C:nuclear membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005643">
        <property type="term" value="C:nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005049">
        <property type="term" value="F:nuclear export signal receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009553">
        <property type="term" value="P:embryo sac development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051028">
        <property type="term" value="P:mRNA transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009846">
        <property type="term" value="P:pollen germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009860">
        <property type="term" value="P:pollen tube growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006611">
        <property type="term" value="P:protein export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000055">
        <property type="term" value="P:ribosomal large subunit export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000056">
        <property type="term" value="P:ribosomal small subunit export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000022">
        <property type="entry name" value="protein EXPORTIN 1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041123">
        <property type="entry name" value="CRM1_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041235">
        <property type="entry name" value="Exp1_repeat_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013598">
        <property type="entry name" value="Exportin-1/Importin-b-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045065">
        <property type="entry name" value="XPO1/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014877">
        <property type="entry name" value="XPO1_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040485">
        <property type="entry name" value="XPO1_repeat_3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223">
        <property type="entry name" value="EXPORTIN 1/5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223:SF2">
        <property type="entry name" value="EXPORTIN-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08767">
        <property type="entry name" value="CRM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18777">
        <property type="entry name" value="CRM1_repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18784">
        <property type="entry name" value="CRM1_repeat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18787">
        <property type="entry name" value="CRM1_repeat_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08389">
        <property type="entry name" value="Xpo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01102">
        <property type="entry name" value="CRM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00913">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50166">
        <property type="entry name" value="IMPORTIN_B_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0509">mRNA transport</keyword>
    <keyword evidence="8" id="KW-0906">Nuclear pore complex</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0811">Translocation</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="10">
        <location>
            <begin position="37"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW29035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1072" mass="123389" checksum="C6B2DD11B1A05437" modified="2014-02-19" version="1">MAAEKLRDLSQPIDVSLLDATVAAFYGTGSKEQRTAADQILRDLQNNPDMWLQVMHILQNTQSLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDVIVQLSRNEVSFRTERLYVNKLDIILVQILKHEWPVRWRSFIPDLVSAAKTSETICQNCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSVSQRTELIRATLSTLHAFLSWIPLGYIFESPLLETLLNFFPVPAYQNLTLQCLTEVAVLQFRNYYDAHIKMYNIFMVQLQSILPPTTNIPEAYAHGSSEEQAFIQNVALFFTSFFKVHIRILESTKENITALLLGLEYLINISYVDDTEVFKVCLDYWNVLVAELFEPHRLENPAAAAASMMGLQVPGMVDGIGSQLLQRRQLYAGPMSKLRMLMISRMAKPEEVLIVEDENGNLVRETMKDNAVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMLEEQENRFLVMVIRDLLNLCEITKGKENKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENGSFVSELLTTLPNTIADLEPHQIHSFYESVGYMIQAESDVQKRDEYLQKLMVLPNQRWMEIIGKAHQNVDFLKDQDVIRNVLNILQTNTSVASSLGTYFLPQITLIFLDVLNVYRMYSELISKSITEGGPFASRTSYVKLLRSVKRETLKLVDTFLDKAEDQPQIAKHFVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNFEDYPEHRLNFFSLLRAIATHCFPALICLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLFEMLKKFQVSEFCNQFYRTYFLTFEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLADSGSLTEPLWDAATNPYPYPSNAAFVREFTIKLLSTSFPNMTASEVTQFVNGLFESTNDLAIFKTHIRDFLVQSKEFSAQDNKDLYAEEAAAQRQRERQRMLSIPGLVAPSELQDEMVDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJS7</accession>
    <name>V7CJS7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MINDY deubiquitinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G153200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJS7"/>
    <dbReference type="SMR" id="V7CJS7"/>
    <dbReference type="STRING" id="3885.V7CJS7"/>
    <dbReference type="Gramene" id="ESW30442">
        <property type="protein sequence ID" value="ESW30442"/>
        <property type="gene ID" value="PHAVU_002G153200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2427">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNYRKNI"/>
    <dbReference type="OrthoDB" id="10261212at2759"/>
    <dbReference type="PhylomeDB" id="V7CJS7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071944">
        <property type="term" value="C:cell periphery"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016807">
        <property type="term" value="F:cysteine-type carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990380">
        <property type="term" value="F:K48-linked deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071108">
        <property type="term" value="P:protein K48-linked deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007518">
        <property type="entry name" value="MINDY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033979">
        <property type="entry name" value="MINDY_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18063">
        <property type="entry name" value="NF-E2 INDUCIBLE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18063:SF6">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04424">
        <property type="entry name" value="MINDY_DUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MINDY deubiquitinase" evidence="2">
        <location>
            <begin position="37"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="429"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="665"/>
            <end position="720"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="669"/>
            <end position="686"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="693"/>
            <end position="707"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="709"/>
            <end position="720"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="720" mass="79046" checksum="A81F60B793943012" modified="2014-02-19" version="1">MASSSSPKDQEQPLRDEDRQEEHPPPPPQPEPVKDCVHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNDKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIADFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALMGELVSLETLNMDVHHKNVAEEDCVDFVAATTATLGVPSPSISKARSFDDSSQSVSDLIPRKGDREEEAELLRILKLSEGDSNASISDPVAVHVDGGEISVSMGRNISNEQVLDMDSGDKLGNSTGAGNSHFHDQEPSVSNDFTASGKYLNKQISSTSILGEAANSSLKTDTMSDLHQSTYTGPKESFDQNDVIEKNSLDALVLNESEVISSHEEYSVSDVSGGDGKVHDQSTPITIDHEVVGESHGPDATKSLQLSPGHADSDSCSIRYQQTDVSGALTSSVHGSEPIYEGEECVLDRRTFEDREPVYEGEVVLAEQADKSTLASPDLRAKDELTPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKYEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSNFKEFKVENQENSTWDENNALTSTADYLASIDSAAQAGLDINSDLQLAIALQQQEFEQQPSRQNNLQQPSISGNSRLVTGPQVARNTGRQSSSASTSPRPDGKSKEKCIVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK49</accession>
    <name>V7CK49_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G164300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK49"/>
    <dbReference type="Gramene" id="ESW30572">
        <property type="protein sequence ID" value="ESW30572"/>
        <property type="gene ID" value="PHAVU_002G164300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502ST7D">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1863475at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35751">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35751:SF3">
        <property type="entry name" value="OS06G0530200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="86" mass="9018" checksum="937DB58DFD90CD1B" modified="2014-02-19" version="1">MGAGHAMKRIPRIKFPQRHPKPSGSAPETRALSSRNDGSLPPVTSSKASNALGGKASIQPKRTPVSKEEIEAVLVCKIPCKLGGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL39</accession>
    <name>V7CL39_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">leucine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Leucyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G085100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>tRNA(Leu) + L-leucine + ATP = L-leucyl-tRNA(Leu) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:11688"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL39"/>
    <dbReference type="SMR" id="V7CL39"/>
    <dbReference type="STRING" id="3885.V7CL39"/>
    <dbReference type="Gramene" id="ESW29616">
        <property type="protein sequence ID" value="ESW29616"/>
        <property type="gene ID" value="PHAVU_002G085100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0437">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KFIEWQF"/>
    <dbReference type="OrthoDB" id="10249672at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA deacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004823">
        <property type="term" value="F:leucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006429">
        <property type="term" value="P:leucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048608">
        <property type="term" value="P:reproductive structure development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd07959">
        <property type="entry name" value="Anticodon_Ia_Leu_AEc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.730.10:FF:000020">
        <property type="entry name" value="Leucine--tRNA ligase cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.740.10:FF:000001">
        <property type="entry name" value="Leucine--tRNA ligase, cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="entry name" value="Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004493">
        <property type="entry name" value="Leu-tRNA-synth_Ia_arc/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055416">
        <property type="entry name" value="RBD_LARS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00395">
        <property type="entry name" value="leuS_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45794:SF1">
        <property type="entry name" value="LEUCINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45794">
        <property type="entry name" value="LEUCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24810">
        <property type="entry name" value="RBD_LARS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="ValRS/IleRS/LeuRS editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="12">
        <location>
            <begin position="53"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="12">
        <location>
            <begin position="219"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="domain" description="Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding" evidence="13">
        <location>
            <begin position="824"/>
            <end position="946"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine--tRNA ligase RagD-binding" evidence="14">
        <location>
            <begin position="977"/>
            <end position="1053"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="156"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="11">
        <location>
            <begin position="156"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF24810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW29616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1115" mass="126145" checksum="5ACAC12842D37E8E" modified="2014-02-19" version="1">MLLFCRTHSRLAHSVLCLQTSAAHSFRCLTEMATDGGKSFARRDRLREIEVKVQKWWEEKEVFRAEPGEVNPKPGEKFFGNFPFPYMNGYLHLGHAFSLSKLEFAAAFHRLRGANVLLPFAFHCTGMPIKASADKLAREIRNFGDPPVFPTLIEEEQQQQEDEPSGDGAPPDKFKGKKSKAAAKSTGQVYQWEIMRSVGISDAEISKFQDPYKWLSYFPPLAVEDLKAFGLGCDWRRSFITTDVNPYYDSFVRWQMRKLKSMGKVVKDVRYTIFSPLDGQPCADHDRASGEGVQPQEYTVLKMELVSPFPEKFKVLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEINDSEVFVLAHRAALNLAYQNHSPVPGKPSCLLELTGRDLIGLPLKSPLSFNEVIYALPMLSILMDKGTGIVTSVPSDAPDDYMALHDLKAKPAFREKYGVKDEWVMPFEIVPIVEIPQFGNKCAETICLQMKIKSQNDKEKLAEAKKQTYLKGFTEGTMIVGEFAGRKVQEAKPLIRTKLLETGQAIVYSEPEKRVMSRSGDECVVALTDQWYLTYGESEWKKLAEECLANMSLYSDETRHGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVESLSDSTIYMAYYTIAHYLQNGDMYGSSESIIKPQQLTDDVWDYIFCDGPYPKLTDISSSLLNKMKREFEYWYPFDLRVSGKDLIQNHLTFSIYNHTAIMAKHHWPRGFRCNGHIMLNSEKMSKSTGNFRTLREAIEEFSADATRFSLADAGDGVDDANFVFETANAAILRLTKEIAWYEDNLAAESSMKTGPPSTYSDRVFANEINIAIKTTEQNYSNYMFREALKTGFYDLQAARDEYRFSCGVGGYNRDLVWRFMDVQTRLLAPICPHYAEFIWRELLKKDGFVVNAGLPTADTPDLTLKSANKYLQDSIVMMRKLLQKQLSGSKKGNKKGPPVASLTENKVTGLVYVNEQFDGWKAECLSILQNKFNRDTRTFAPDSEISEALQQSSVGQSSNFKQIQKLCMPFLRFKKEEAISIGAQALDLRLPFGEIEVLKENLDLIKRQIGLEDVEILSAADADSLAKAGKFSTLLNQNPPSPGSPTAIFLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMW9</accession>
    <name>V7CMW9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G136500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMW9"/>
    <dbReference type="Gramene" id="ESW30241">
        <property type="protein sequence ID" value="ESW30241"/>
        <property type="gene ID" value="PHAVU_002G136500g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="79" mass="9134" checksum="DCCAD9B4470D1C62" modified="2014-02-19" version="1">MHLHEDRRQHFRSARKGIDIAIAIAMPYLTHSFTTRSKKPRTTTTHQNLNHAHIHLISDLPYQTQTNPTISPNKIGNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN20</accession>
    <name>V7CN20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G252500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN20"/>
    <dbReference type="SMR" id="V7CN20"/>
    <dbReference type="STRING" id="3885.V7CN20"/>
    <dbReference type="Gramene" id="ESW31612">
        <property type="protein sequence ID" value="ESW31612"/>
        <property type="gene ID" value="PHAVU_002G252500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0610">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAACNIN"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048825">
        <property type="term" value="P:cotyledon development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000277">
        <property type="entry name" value="protein kinase PINOID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000351">
        <property type="entry name" value="protein kinase PINOID 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000020">
        <property type="entry name" value="serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="3" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="84"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="451"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="466"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW31612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="475" mass="53141" checksum="21AF936AC8FAC538" modified="2014-02-19" version="1">MLETAAGGERHSEASSETLNSSMLGSSMSSESICSTSFSRLSFDLLPPSPESLTLKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRNRHFNSPGEDEEDEACCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHTLRFKHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDISLCSDAIPAVESSDSLHLPSPNPLPYTYTHSHTPPRSHSFISPFSCFSNRGFRSHDMRAVEPNLLFVAEPVSARSCSFVGTHEYVSPEVASGKSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPASCLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFRGLNLALIRMQTPPQVPGSRRTKTTSLYPVKGDRNSNHHKQQQTASFDFFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQ70</accession>
    <name>V7CQ70_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G235700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQ70"/>
    <dbReference type="SMR" id="V7CQ70"/>
    <dbReference type="Gramene" id="ESW31400">
        <property type="protein sequence ID" value="ESW31400"/>
        <property type="gene ID" value="PHAVU_002G235700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1072">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCFIDSE"/>
    <dbReference type="OrthoDB" id="191037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080037">
        <property type="term" value="P:negative regulation of cytokinin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000762">
        <property type="term" value="P:regulation of phenylpropanoid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22152">
        <property type="entry name" value="F-box_AtAFR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006652">
        <property type="entry name" value="Kelch_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044595">
        <property type="entry name" value="KMD1-4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46407:SF6">
        <property type="entry name" value="F-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46407">
        <property type="entry name" value="OS02G0208700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01344">
        <property type="entry name" value="Kelch_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00612">
        <property type="entry name" value="Kelch"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117281">
        <property type="entry name" value="Kelch motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="16"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="350" mass="38886" checksum="1AD0240BA3719761" modified="2014-02-19" version="1">MDMDFSIFIQFNDLIPGLPTDLGLECLTRLPHSAHRVALRVCRNWHHLLQSDQFYTHRKKTGRTRTVTCLVQAREERPRHDKLTGSLTPCYGISLFDPESMAWDRVEPVPEYPFGLPLFCQLASCDGSLVLMGGWDPASYEPLTAVFVYDFRTSEWRRGKDMPEKRSFFAIGSGRGRVYVAGGHDENKNALRSAWAYDPRGDEWAGVGPMGRERDECEGVVVGDEFWVVSGYGTERQGMFDGSVEVLDLGSGQWREVNGVWEEGRCPRSCVGVGKDGKLVNFRGLDPGFRVGVCGVAVGSRVVLSGSEYEGAAQGFYLVDMEKGQNRKLRSISVAEGFSGLVQSGCCVEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQT2</accession>
    <name>V7CQT2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G333200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQT2"/>
    <dbReference type="SMR" id="V7CQT2"/>
    <dbReference type="STRING" id="3885.V7CQT2"/>
    <dbReference type="Gramene" id="ESW32567">
        <property type="protein sequence ID" value="ESW32567"/>
        <property type="gene ID" value="PHAVU_002G333200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXKR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEHSNYA"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="PhylomeDB" id="V7CQT2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46553">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46553:SF3">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="11"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="17740" checksum="399F9BCB04BF0416" modified="2014-02-19" version="1">MASSCGEKRVMVLAMDAHEHSNYALEWTLDHFFTPFGAEAPFNLVIINAKPSPPPAVSMAGPGFLGSEIFPAVEMQLKLNADQISEKAKQICASKSVGEVTVEVAEGDARNVLCDAVERHRASVLVLGSHGYGAIKRAVLGSVSDHCARHARCSVMIVKKPKIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRU9</accession>
    <name>V7CRU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF7950 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G028500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRU9"/>
    <dbReference type="STRING" id="3885.V7CRU9"/>
    <dbReference type="Gramene" id="ESW32917">
        <property type="protein sequence ID" value="ESW32917"/>
        <property type="gene ID" value="PHAVU_001G028500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WENNGQK"/>
    <dbReference type="OrthoDB" id="1922150at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001046">
        <property type="term" value="F:core promoter sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048838">
        <property type="term" value="P:release of seed from dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057710">
        <property type="entry name" value="DUF7950"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33595:SF3">
        <property type="entry name" value="PAS DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33595">
        <property type="entry name" value="VON WILLEBRAND FACTOR A DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25821">
        <property type="entry name" value="DUF7950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7950" evidence="2">
        <location>
            <begin position="211"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="364" mass="40047" checksum="D1F085DAC8A8AE35" modified="2014-02-19" version="1">MIKTLNPYPNPAKTAEIMSRYRPIAPKPETSPNSMTEGSSSLSHKIKQSPYLRNLWPQLQARPTRTRKRGRAPLTLPPSSFKRHKTHILGFCPPCHVTSPGNNLSFQGFAPPPLPLPHPNHGLGMLNRSIEKNSLMNPSLVTLPLLPCSPGAPAPKLDSITATTTTKPCGGGVIDLNTKASVPEERDLLQQLQKPVSNNVIQPHPVRPIGSSITVVCIGEDSTLPSQTPKRSQEVEAEVESESLPVVISDSNHRVRMANSAYKEMVGQPLCPWLESMVNAGAGNLQCKRISGEVALHLSESNIPTSSNGFSCWVRIEWQSDQQKKCCVNAFCDVMKLTCESRDYLFTWRFHTRTREACQSSCTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS67</accession>
    <name>V7CS67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G265600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family. Ycf83 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS67"/>
    <dbReference type="SMR" id="V7CS67"/>
    <dbReference type="STRING" id="3885.V7CS67"/>
    <dbReference type="Gramene" id="ESW31761">
        <property type="protein sequence ID" value="ESW31761"/>
        <property type="gene ID" value="PHAVU_002G265600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1120">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTCEPAD"/>
    <dbReference type="OrthoDB" id="333486at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030674">
        <property type="term" value="F:protein-macromolecule adaptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.300.12:FF:000008">
        <property type="entry name" value="iron-sulfur assembly protein IscA, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="ATAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="ATAP_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017870">
        <property type="entry name" value="FeS_cluster_insertion_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031108">
        <property type="entry name" value="IscA_plant_cyanobact"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00049">
        <property type="entry name" value="iron-sulfur cluster assembly accessory protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47265">
        <property type="entry name" value="IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47265:SF1">
        <property type="entry name" value="IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01152">
        <property type="entry name" value="HESB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core" evidence="2">
        <location>
            <begin position="63"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW31761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="18376" checksum="03870D6FCED1DBEB" modified="2014-02-19" version="1">MAFSAISAMNSPQFVRIPISFPQSSLPSVRFSPPNLKRPKPLSIRSVSVPAAPASGSLAPAVSLTDNALKHLNKMRSERNENLCLRIGVRQGGCSGMSYTMDFEDRANARPDDSIIEYEGFEIVCDPKSLLFIFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTC3</accession>
    <name>V7CTC3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Wall-associated receptor kinase galacturonan-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G069700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTC3"/>
    <dbReference type="STRING" id="3885.V7CTC3"/>
    <dbReference type="Gramene" id="ESW33442">
        <property type="protein sequence ID" value="ESW33442"/>
        <property type="gene ID" value="PHAVU_001G069700g"/>
    </dbReference>
    <dbReference type="OMA" id="YANNTIR"/>
    <dbReference type="OrthoDB" id="1513794at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33138:SF30">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33138">
        <property type="entry name" value="OS01G0690200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755762" description="Wall-associated receptor kinase galacturonan-binding domain-containing protein" evidence="3">
        <location>
            <begin position="23"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="Wall-associated receptor kinase galacturonan-binding" evidence="4">
        <location>
            <begin position="23"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW33442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14357" checksum="87EF9E98DB50CE18" modified="2014-02-19" version="1">MWRERALIVLLFLLHLIHGENACPPSSCGKISNISHPFRLKEDPKGCGLSSYELSCENNIALFSLYSGTFHVQAINYNNFTIRVVDPGLQQTNCSSLPRYFFSPSNFTHSDYQPYLLPYNPPKDDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTJ7</accession>
    <name>V7CTJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G302700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTJ7"/>
    <dbReference type="SMR" id="V7CTJ7"/>
    <dbReference type="Gramene" id="ESW32211">
        <property type="protein sequence ID" value="ESW32211"/>
        <property type="gene ID" value="PHAVU_002G302700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUM2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHCATRT"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01989">
        <property type="entry name" value="USP_STK_Ubox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000498">
        <property type="entry name" value="U-box domain-containing protein 51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051348">
        <property type="entry name" value="U-box_ubiquitin_ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647:SF36">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647">
        <property type="entry name" value="OS02G0152300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="452"/>
            <end position="715"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="179"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="742"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW32211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="778" mass="86466" checksum="CD0A601D27A36B3F" modified="2014-02-19" version="1">MSRLIQEKKIGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQVLLLIHVRQRASSIPTPAGNLVALDGNDDVARAYRQQMDNESKELFASFRVFCNRKSIQCKEVILEDMDIAKGLIEGISKYSIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPPFCTVYIISKGKISLVKTATAKPPARNNTLQPQQSNGRMDPQLTRNPALTRPSMEKSAYLVRQQPADEEEMISPFTRPGRGGSYRSYESSVADSDISFVSSGRPSVDRMFPSMYDDMDSSMNPRLSTGSDFDNRSYGSSFSGAKSIDHGDFSFSSQDSGMSMSSSMFSAQDDVEAEMRRLKLELKQTMEMYSTACKEAMTAKQKALELQRWKVEEERKMEETRLAEETALARVEHEKAKCMVAMEAVETSRKIAELEARKRMSVGSGYKTADIFSHSPARYRKYTIEEIEEATNFFSNSLKVGEGGYGPVYRCELDHTPVAVKVLKPGAAQGQLQFQQEVEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKRALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVEDTVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQIITAKPPMGLTHLVERAIEKGTFADMLDPAVEDWPVEHAMHFAKLCLGCAEMKRKDRPDLGKVVLPELNKLRDFADDNMPMMMMFGAPSGFGTRSNYGSSNSSNSSPQNSMSEESTSGMSGYESRSSSSYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUS0</accession>
    <name>V7CUS0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G109100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUS0"/>
    <dbReference type="STRING" id="3885.V7CUS0"/>
    <dbReference type="Gramene" id="ESW33917">
        <property type="protein sequence ID" value="ESW33917"/>
        <property type="gene ID" value="PHAVU_001G109100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWEH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VNVGPQP"/>
    <dbReference type="OrthoDB" id="691744at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009638">
        <property type="term" value="P:phototropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039615">
        <property type="entry name" value="PKS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33781">
        <property type="entry name" value="PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33781:SF1">
        <property type="entry name" value="PROTEIN PHYTOCHROME KINASE SUBSTRATE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="270"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="430"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="146"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="171"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="274"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="482" mass="52353" checksum="756D916DBC96D831" modified="2014-02-19" version="1">MQTVRDTDATFSSYLRPDNKATIITGPVEDATTELSIFDAHKYFNDDGSSNNNINIQKVSISRVSPMERIPERGDVIATEATRYSSASSSVDGYAHIRNYRARSFHAATPTASSEASWNSQTGLLSHPPGAIPVSMQNPQNPKNLRNPKHSKSSWLLRRKCPCTGKKSVQIKESAQESKSQISQQERDYEHHNVSHHITPNKWIPNQTPASLPVPVTATATLVATKSQRFHNSNSHRVASSVRVPFTDGFTFPVLNHNNPITKLKLANGVAEEDPPRDSLEVFRPPDESSPKPLNFTFPAKARVVEDDAASDASSDLFEIESFSTATQSTFPAAYRRSSRDSFDEASGSTSTTGFFFGRRSVDESSTTPTITECYEPSEASIEWSVTTAEGHDEAVPGVEEKWKRKGGNGLLVSCRCEKAVSVGPQPVKCGSEGQRGATSPSASHVNAIASGANSSKIGSVNKPPLARAHRNAPRVSLPFAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV79</accession>
    <name>V7CV79_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_001G057200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a ribonucleotide in rRNA + S-adenosyl-L-methionine = a 2'-O-methylribonucleotide in rRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:48628"/>
            <dbReference type="Rhea" id="RHEA-COMP:12164"/>
            <dbReference type="Rhea" id="RHEA-COMP:12165"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90675"/>
            <dbReference type="ChEBI" id="CHEBI:90676"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="10">
            <dbReference type="Rhea" id="RHEA:48629"/>
        </physiologicalReaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyltransferase superfamily. Fibrillarin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV79"/>
    <dbReference type="SMR" id="V7CV79"/>
    <dbReference type="STRING" id="3885.V7CV79"/>
    <dbReference type="Gramene" id="ESW33278">
        <property type="protein sequence ID" value="ESW33278"/>
        <property type="gene ID" value="PHAVU_001G057200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1596">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HARFNGC"/>
    <dbReference type="OrthoDB" id="1859733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031428">
        <property type="term" value="C:box C/D methylation guide snoRNP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990259">
        <property type="term" value="F:histone H2AQ104 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000494">
        <property type="term" value="P:box C/D sno(s)RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000056">
        <property type="entry name" value="Fibrillarin like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000001">
        <property type="entry name" value="Fibrillarin like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00351">
        <property type="entry name" value="RNA_methyltransf_FlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000692">
        <property type="entry name" value="Fibrillarin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020813">
        <property type="entry name" value="Fibrillarin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003276">
        <property type="entry name" value="PRK04266.1-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10335:SF0">
        <property type="entry name" value="RRNA 2'-O-METHYLTRANSFERASE FIBRILLARIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10335">
        <property type="entry name" value="RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01269">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00052">
        <property type="entry name" value="FIBRILLARIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM01206">
        <property type="entry name" value="Fibrillarin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00566">
        <property type="entry name" value="FIBRILLARIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="11">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="11">
        <location>
            <begin position="54"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00050519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW33278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="321" mass="33809" checksum="321AC0DB1243DF74" modified="2014-02-19" version="1">MAPPRGRGGGSYSGGGSFSGGGGSGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGRGGGRGGGRGGGRGGGMKGGSRVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDSSKVEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV81</accession>
    <name>V7CV81_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G019000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV81"/>
    <dbReference type="SMR" id="V7CV81"/>
    <dbReference type="STRING" id="3885.V7CV81"/>
    <dbReference type="Gramene" id="ESW32811">
        <property type="protein sequence ID" value="ESW32811"/>
        <property type="gene ID" value="PHAVU_001G019000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NPDEWWD"/>
    <dbReference type="OrthoDB" id="1078367at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042645">
        <property type="term" value="C:mitochondrial nucleoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006264">
        <property type="term" value="P:mitochondrial DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011344">
        <property type="entry name" value="ssDNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302:SF18">
        <property type="entry name" value="PROTEIN OSB1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302">
        <property type="entry name" value="SINGLE-STRANDED DNA-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="30797" checksum="5815F13777BBC3C8" modified="2014-02-19" version="1">MKPEPFIFSKRYPIPSIFSRYFPFSTHNRHSFDDSVTRCSAVYSHAFKFQRPATIRWTPRLENTASFIGYVTREPARVNSKTGNLGAHTVLRVRRSNQPNSSFFRVLLMMWNSVAELALEHLKPNDFIYASGSLGSYTKPGADGIPGLNYKLDVKEFKFVTQRCGRQGHKKLESAEANVGTQNNQNRLHLWQVFFANPNEWWDQRKRKLNPKQPDFKNKYTGEVLWLSTYDPPWVRRQLQLLDSKMAGGSVGHHHSRVTNWVYDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWM6</accession>
    <name>V7CWM6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G060300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CWM6"/>
    <dbReference type="STRING" id="3885.V7CWM6"/>
    <dbReference type="Gramene" id="ESW33321">
        <property type="protein sequence ID" value="ESW33321"/>
        <property type="gene ID" value="PHAVU_001G060300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QREE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTGNMCK"/>
    <dbReference type="OrthoDB" id="649641at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43939">
        <property type="entry name" value="COILED-COIL DOMAIN-CONTAINING PROTEIN 158"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43939:SF50">
        <property type="entry name" value="NUCLEOPORIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="3060"/>
            <end position="3080"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="185"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="757"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="874"/>
            <end position="893"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="499"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="583"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1272"/>
            <end position="1306"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1619"/>
            <end position="1674"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1725"/>
            <end position="1776"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1813"/>
            <end position="1864"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1901"/>
            <end position="1952"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1989"/>
            <end position="2043"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2070"/>
            <end position="2097"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2132"/>
            <end position="2229"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2335"/>
            <end position="2376"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2635"/>
            <end position="2837"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="2893"/>
            <end position="2948"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="14"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="30"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="51"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="76"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="3081" mass="347955" checksum="C486448FBE9E87E8" modified="2014-02-19" version="1">MDRNKSRTDLLAAGRKRLQQFRQKKDHKSGSNSGKSSKKVGLPQLVDSDSDAASSVSVSTVSSQITDGNVEDDSHSNVVNTEISESQSVANSLPPDNIDLSVVSSSVVMTHNTGDETVLDSNAELAHRAPGVCEKDNELSVQGNIAKDIGADVAEDVSLRTSGSLVPEGGETHDHASAPVSILSQSAPGTSAAGESISEREGEKREELLLLSQDIQNTSVMQTREDQVTDLGAMQEADGLVTKKFCQSTDLVNDDQRQLLLSEVGESDQSLSGISLEKARIGEASHEAEQRSKSIELLSSHEVVSDKLSGFDKGQRDDIAASGTSARNLEREALPSSYHEEILLQSNQEQNSDVVLVEQDRGLLEGFNQQCPHVGLTIEDPKSRAGHEFDPARPLDVSSVFDANSFNLLQLAEIIRGLSEQECQFLIEARGAESDLDPLASGSVLSDHDISEAFQSLKEELFLSNLMKNIFNIQLAELLESDNQGHQLVDEIYQLRASHNEVNEKNQHLSEELDNCRVDLHDISSKNVELQNQFNAAMAEVEALSARVVELQNNFDMSHKDSLKLSKELADCRGFISSLQVEKKGLNETLDLTNGEKNKLLEEKEFHLFEIKNLATELADLNSSMEGVKLEKSNLIDRISSVTEERNKIEVEIEHLKHEIDRLSLDLVENKDLVASIQTENSNLNGNLAFSGDKIKHLEDENHRLSSQIIALNEQLSIEKGDRLRFESDLKEATVHLEQISKENVFRNNTLDKHKIEDTGKEHSQQLSQPRDLGRQANEQSKGVEIAITEDSLHMDQEPEEGAPVGPHVNRLECEVFDDDLGFVSLKDCLDEAEKVLTMLEKAINELHFQSVSSSRSGEKVSSPVVSKLIQAFESKGHEDEPEEETKDSSYVQSSSNSFKLTKKQIENLKELLSKWKLDVQIAGALFKVERDDRKTGDAKYSDLKDQFEQLKQHCSDMEASNIELTIQYESVKQLLGDIQEKKFLLEELCDTLKLEDARLKAKNNELYEKLGYCQSTISELHTEMNDVKHISIDMASSVGSQLENLQKEITERAMLLEQGRNMSVAQIVELVGKLEESVGGTLCTTFTSDTHGDLDITHQLKVSVHAAAEMIFDLQKKLESTNSEHEIMCTSYKEVSSKCDDLLGRNELAVSLLHKMYSDLRKLVLGNGGTMDDKIDVQSEVLPELLNYNSYQPILKHIGNILTEKQELESVTKEMKSELMHRETELEELKMKCVDLDSVSKLIPDLTGVLNTDIPKLDMNKSPLSWLESLVSSLVQKIREAEIQYHTSKEEYGSKEMELAELKEKMHYLDTQRLENENEILVLKESLYQAEEALVVARSELHKKANELEHSEQRVSSIREKLSIAVAKGKGLVVQRDGLKQSLAETSSELERCFQELQLKDNRLQEVETKLKTYAGAGECVEALESELSYIRNSSNALRESFLLKDSMLQRIEEILEDLDLPEQFHSRDTIEKIDWLASSVSGNSLALNDWEQKDAAGGDSYSDAGYAVRDSWKDDSQLQPDSDDFRMKFEELQSRYYGLAEQNEMLEQSLMERNSLLQRWEELVNRVEMPSHLQSMEAEDKIECICAALTEANHHIDALQLKIEKYESYCGLLNTDLEESQRTVSAFQEDLSALTSERGDLSEKVESLLHENEKLSLQTREAELEKENLLKETTSVKDKLEHKTAIEEQLFTIEGKIRKLQDLVGDALSESDIQNMVFGNANIDSLEELLGKLVEKLNMEQKLSALTRETELENERLLKEITSLKNELEHKTAIEEQIFTIDGRIRKLQDLVGDALSESDIQNMVFGNKNIDSLEQLLGKLVEKLNMEQKLSALTRETELENERLLKEITSLKDQLEHKTAIEEQIFTIDVRIRKLQDLVRDALPESDTQNMVSGNAPIDSLEELLGKLVEELNVEQKLSALARETELEKEKLLKEITSLKDKLEHKTAIEEQFFTIDEKIRKLQDLVGDALSESDTQNTVSGNAPIDSLEELLGKLVEKLKIEQKLSAQTRETELENEKLHNEIANLKDKLERKAAIEEQILIIDGKIRKLHHLVVDALSESETENLVSGSEKIDSLEELLRKLIENHANLSSKNPAYGVFGDGLQSQKEDGTLCEERSIDVLDKETDIDRYKIDLEKSLNELMHVKEERDRSLEKQISLSGEVEAMTKRIEELQGLLNQEEHKSASLREKLNVAVRKGKSLVQHRDSLKQTIEEMTVQMEHLKSEISNRDNTLAEREQKLRQLSTYPDRLEALESESLLLKKHLEETEHHLQEQEYALQLILNKLGEIEVGGEGHMSDPVKKLEQVGKLCSDLHSTVASLEQESRKSKRASELLLAELNEVQERNDSFQEELEKVTTELVDIRRERDSAEASKLEALAHLEKLSALHEEGRKSHFSDIMELRSNLNLVFKSFGEVHSLLSNAFFFDLESYRKLEAGLESCMKGNNATNMVDSSITKDHWASNKSSVPADSWRDFDAIDQYDDNTSVENLRLFGHQLQEFMIKVSSLKEKINIHSSFAQELDKTLSKLMANIQIEMTSQRELSETVKKELSEHDEKLVALRGIIAYLYDACNNSSIVLENEKAELSGTKVDSSDLGINLETPSFDDDISEECIKTMADRLLLAVKGFTSIKAEFLDANQKEMKATIANLQRELQEKDVQRDRICSDLVKQIKDAEAAANSYSQDLQAFKIQEHNLKKEVEVIEAERKVLEQRVNELQDRQETTAALEEKMRSQTGLLAAKDQEIEALMHALDEEETQMEELTNKIVDLEKVVQQKNQEIENLEFSRGKVIKKLSITVSKFDELHHLSANLLSEVEKLQSQLQERDTEISFLRQEVTRCTNDVLLASQMSNQRSSDEIFEFLTWVDMVVSHDGAHDIHPDMKSNSQVHECKEILHKKLMSLLSELENLREVVESKDAMLQIERSKVEELNHKTESLETSLHQKELQLNLLEGVEETGKGAGTSSEIVEVEPVMNHWSPSGAFVAPQVRSLRKGNSDHIAIAVDADPGSTSRIEEEDDKVHGFKSLTSSKIVPRFTRPLTDLIDGLWVSCDRTLMRQPVLRLGIIFYWAIMHALLAFFVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXU0</accession>
    <name>V7CXU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glycerophosphodiester phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.46</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G091000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a sn-glycero-3-phosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12969"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:83408"/>
            <dbReference type="EC" id="3.1.4.46"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycerophosphoryl diester phosphodiesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.46" evidence="2"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXU0"/>
    <dbReference type="SMR" id="V7CXU0"/>
    <dbReference type="STRING" id="3885.V7CXU0"/>
    <dbReference type="Gramene" id="ESW33696">
        <property type="protein sequence ID" value="ESW33696"/>
        <property type="gene ID" value="PHAVU_001G091000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2421">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTELYYD"/>
    <dbReference type="OrthoDB" id="1058301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046475">
        <property type="term" value="P:glycerophospholipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.190:FF:000034">
        <property type="entry name" value="Glycerophosphodiester phosphodiesterase GDPD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051578">
        <property type="entry name" value="GDPD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22958:SF1">
        <property type="entry name" value="GLYCEROPHOSPHOCHOLINE PHOSPHODIESTERASE GPCPD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22958">
        <property type="entry name" value="GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="7">
        <location>
            <begin position="110"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="404"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="41"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="445" mass="49720" checksum="50F199EA8D8E87CD" modified="2014-02-19" version="1">MIWERNIRKEIRWRVNLALVDAINSAPKHALIFTTTTTTTNNKPSCTLPTTTTSPSPSPTPSTQMALKAVHVTDVPSLDHVPENASLALCSSRFPNGVEMGRSAFKLPKFVVIGHRGNGMNVLQSSDRRMRAIKENTIMSFNAASTFPLDFVEFDVQVTRDDCPVIFHDDFIFSEDNGAVFGRRITELTLSEFLSYGPQREHGNEGKILLRKKDGKIIPWDVEQDDSLCTLQEAFVKVEPAIGFNIELKFDDHIVYEQDYLVHVLQTILKVVFEYAKDRPIIFSTFQPDAAMLIRKLQSNYPVFFLTNGGCEIYEDVRRNSLEEAMKLSVENGLEGIVSEIKGIFRDPGTVTKIKESKLCLLSYGKLNNVPEAVYMQHLMGIDGVIVDLVKEITEAVADMIKSTKGGEGEGLTDGSGAVQGNTRPQFSQQDLSFLLKLIPQLIQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZ73</accession>
    <name>V7CZ73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G234100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZ73"/>
    <dbReference type="STRING" id="3885.V7CZ73"/>
    <dbReference type="Gramene" id="ESW35424">
        <property type="protein sequence ID" value="ESW35424"/>
        <property type="gene ID" value="PHAVU_001G234100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR6K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="645489at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008906">
        <property type="entry name" value="HATC_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF119">
        <property type="entry name" value="TRANSPOSON SUPERFAMILY, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05699">
        <property type="entry name" value="Dimer_Tnp_hAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="9">
        <location>
            <begin position="126"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="849"/>
            <end position="869"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW35424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="869" mass="98829" checksum="CCF1DED6F2684B25" modified="2014-02-19" version="1">MHAWIVREGRRSEPVWEMEIRKQKRRKGWARISVFSLFVGKQTGPASYLLPPKPDLFEAKPTQPDPSLYALTGLSGHISTVLLASLLESVHSLFLFLSSLPIIKKSDSSNRGKMGSNLEPVPITSQKHDPAWKHVQMYKNGDKVQLKCIYCQKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRRKQKIEEEIMSVNPLTTVVNSLPNNNQVDVNQGLQAIGVDHNSSLVVNPGEGMSKNMERRKKMRASKNPAAIYANSEGVVAVEKNGLFPKRVDNHIHMAIGRFLYDIGAPFDAVNSVYFHEMVDAISSRGAGFERPSHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWATETGRVLISFLAYCPEGVVFLKSMDATEISTSADFLYDMIKQVVDEVGVGQVLQVITSGEEQYAVAGRRLTDTFPTLYWSPSAAHCIDFILEDFGNLEWISAVIEQAKSVTRFVYNYSAILIMVKRYTLGNDIVDPSFSQFATNFTTLKRMVDLKHNLQALVTSQEWADCPYSKKSAGLEMLDCLSSQTFWSSCDMIVRLTAPLLKVLRIASSEMRPAMGYIYAGIYRAKEAIKKALGKREEYMVYWNIIHHRWERLWHHPLHAAGFYLNPKFFYSIQGDIHSQIVSGMFDCIERLVSDTRIQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQIVNTRNYIERQHLTDLVFVHCNLRLRQMFTSKDQDFSDPLSFDTISYVDEWIRPRDLYIDEYGNSDWMALDPSSVNTMLLRPLNDEAEELDEGFDDDEIFSCGKDSEDENTVEKLVNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2K8</accession>
    <name>V7D2K8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_001G236600g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2K8"/>
    <dbReference type="SMR" id="V7D2K8"/>
    <dbReference type="Gramene" id="ESW35461">
        <property type="protein sequence ID" value="ESW35461"/>
        <property type="gene ID" value="PHAVU_001G236600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIVYLNC"/>
    <dbReference type="OrthoDB" id="1918322at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000161">
        <property type="entry name" value="Wall-associated receptor kinase-like 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000446">
        <property type="entry name" value="Wall-associated receptor kinase-like 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008:SF25">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 14" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756417" description="Protein kinase domain-containing protein" evidence="14">
        <location>
            <begin position="26"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="278"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="346"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="374"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW35461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="634" mass="68918" checksum="02D31FE1B59E3A3E" modified="2014-02-19" version="1">MEFTTRHFLMAILLLMLSRAPQGSPATPCPACGNTTVPFPLSTTSTCGDQSYKIRCSSGTLIFDTLNNSYPIESIDAKSQRLVIQPAALVQNTCVSTDKVHQGIQLNSTLPFNITSSNTIVYLNCTLTLLQSPLNCSAASACHAYINATASAASCQSGPLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLNSAQPVSRWPEPGLEIQWLSPRETVCGSQEDCDSATSTCGPDASSTIGIKRCFCHDGLVWDPIQGVCSKKITCQNPDGCGDSTKKKAIIAGSVCGAGAAIILAIIAFLLYKRNKRIKEAQARLAKEREGILNASNGGRAAKLFSGKEIKKATNDFSNDRLLGVGGYGEVYKGFLQDGTPVAVKCAKLGNAKGIDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTLLDHLQGQIPKGRGLLSWTHRLQIARHTAEGLAYLHFMAVPPVYHRDVKSSNILLDINMYAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQKAIDFNRAPDDVNLAVYVHRMVEEELLVDVIDPVLKNVATTIELETMKAVAFLALGCLEEKRQNRPSMKEVAEEIEYIISIASAKVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2R5</accession>
    <name>V7D2R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Eukaryotic translation initiation factor 3 subunit F</fullName>
            <shortName evidence="4">eIF3f</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">eIF-3-epsilon</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G241100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the eIF-3 subunit F family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2R5"/>
    <dbReference type="SMR" id="V7D2R5"/>
    <dbReference type="STRING" id="3885.V7D2R5"/>
    <dbReference type="Gramene" id="ESW35516">
        <property type="protein sequence ID" value="ESW35516"/>
        <property type="gene ID" value="PHAVU_001G241100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2975">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYFVHFH"/>
    <dbReference type="OrthoDB" id="25498at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016282">
        <property type="term" value="C:eukaryotic 43S preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033290">
        <property type="term" value="C:eukaryotic 48S preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071541">
        <property type="term" value="C:eukaryotic translation initiation factor 3 complex, eIF3m"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031369">
        <property type="term" value="F:translation initiation factor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001732">
        <property type="term" value="P:formation of cytoplasmic translation initiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009846">
        <property type="term" value="P:pollen germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009744">
        <property type="term" value="P:response to sucrose"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd08064">
        <property type="entry name" value="MPN_eIF3f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.140.10:FF:000034">
        <property type="entry name" value="Eukaryotic translation initiation factor 3 subunit F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.10">
        <property type="entry name" value="Cytidine Deaminase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03005">
        <property type="entry name" value="eIF3f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027531">
        <property type="entry name" value="eIF3f"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024969">
        <property type="entry name" value="EIF3F/CSN6-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000555">
        <property type="entry name" value="JAMM/MPN+_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10540:SF6">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10540">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01398">
        <property type="entry name" value="JAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13012">
        <property type="entry name" value="MitMem_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00232">
        <property type="entry name" value="JAB_MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MPN" evidence="5">
        <location>
            <begin position="23"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW35516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="288" mass="31680" checksum="2E298729EB4ED9A6" modified="2014-02-19" version="1">MASSDRTVLQFSSSSSSSQSISAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVQNPIHLTVDTGFTNGGGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMVEAERIGFDMLKATAVDKIPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVAPDNKIGRFISDAVGSLPKVSPRVFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0I5</accession>
    <name>A0ACC3P0I5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002619</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967771">
        <property type="protein sequence ID" value="KAK6645887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="714" mass="79134" checksum="87C7C3A5B2F13F3D" modified="2026-01-28" version="1">MGYFDLNIPYPQSSPTTKVAEQSNRTRLAVKAMELGYSGIAYNRTIKGVMSDQHRCSIPPLSLSSLLNVLPSLTLSANLHRSLLGIPLSTPFRQYTRLTVCVDSSCQAQALNSGNPILKTYDLVAVKPFNQTAFDLACQSMEVDIISIDFSAKLPFRLKQPMVKIAMQRGVCFEVSYSDLFAGVHKRRQLIGSAKLLMEWTRGRNIVFSSAAPTVNELRGPCDVANLLSLFGLSKERANAAISENCRILLANSLRKKRFYKEAIRVEVLSTDAASHSKEELLQWDPISSGEGDILLNNVQNSSLVSCKASKTEKAIDFTSVVNSLPSNGFEIKNILPANNVLPACSAKKVNFPPVTEKLNQPAPIPNNFTEQSNILDICCEQVENSLSDAITRSHSLSRDYVVEKTMRSGISDAVNFMEKNIPTALDSAFPNDKVHFLPVAKKINQPTPVPNNLTMQPDRVDVCPKQGESSQPLKQSDDISEKNIRNGTTKALNSMKMEISTKATKLKQRSSIDSNADFIPFEAKSFDSESNPCMSNNTLNIVKSHENEKLSGSSQEARNTVHKVEIFDTIFPAPVPDKHCNDKSSDNNLVEVGKIHEALPNEDLKTSISDTSMEDKQLDKLHDAVEHEKQQLKSYDEMKVEDNSKAANYLNPDVVMKDKEISEVSTAPVGVSGALKLKRRAPRRLPLFSFKRLLNPTAFKKKVKKSKSRTKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0S0</accession>
    <name>A0ACC3P0S0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L006943</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="30160" checksum="ED6E79BBC5D6BC92" modified="2026-01-28" version="1" fragment="single">MTALRLVKKTSCNKRQRDKSNESTYLIPMESLPRDNKRQLTDNNESTLIPIKSILQDLLVNVVARVSSESYIDHHNMKVCCRDFFHASKNNYMWQQVSLEKFPLIPWLHKEDASMFDSFMQSCKGGGNIEALSRVGLRELKSFVGNVENGIKYLKMAAEKGHLEAKYAYALILLCSYDDDFRKQGVEYLEFLRNAKCVVNCRNKVITLLGRLWRRPHGTLKRNPTPLCCNKLCKGWNLKKGTWQLVDNEDDDDTIENSCEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0U6</accession>
    <name>A0ACC3P0U6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002041</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967828">
        <property type="protein sequence ID" value="KAK6645764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="77" mass="9102" checksum="74CFF15B7F15B384" modified="2026-01-28" version="1" fragment="single">MNNNGEFGYVDHVFVTEFQKELGQEWILVDSEGNVHIVQYNENLLSPKMLRGWFTLTDFYGFTDDHYMFTCVRTLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P182</accession>
    <name>A0ACC3P182_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001687</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967989">
        <property type="protein sequence ID" value="KAK6645717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="106" mass="11514" checksum="7651BECFAC8D2FD7" modified="2026-01-28" version="1">MADYGDFSPGVVAELVPKIDYTQPVEEIPLMLVQSTRLPGGNGFVIGLAVCHVLSDGLGSIQFINSWAKLGRGETLEPHELPYLDRTVLKHQHSSTSPSPCFDHPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1C5</accession>
    <name>A0ACC3P1C5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L006301</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967756">
        <property type="protein sequence ID" value="KAK6646183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16914" checksum="F8ED42F77192B306" modified="2026-01-28" version="1">MGSEEDSIEQSVASRRERLLALRAAQELSSAPEPKDDDDGEEEDQQQEMKFRNYVPHDKNLQEGKLAPAVLPKFEDPVDVPPPEPQVQEDPFLNIAPKKPNWDLRRDVQKKFDKLEKRTQKALYQLMVEQEKQKQLTEGDDTNGTAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1E4</accession>
    <name>A0ACC3P1E4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002646</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967759">
        <property type="protein sequence ID" value="KAK6645974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="68" mass="7559" checksum="95B1B00A42091425" modified="2026-01-28" version="1">MTTSRRFADRKVEKFEKNITKRGFVPDTTSKKGKDYPIGPLLLGFFVFVVIGSSLFQIIRTATSGGMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>T2DNR1</accession>
    <name>T2DNR1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">BZIP transcription factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G005800g</name>
    </gene>
    <organism evidence="8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="8">Pod</tissue>
        </source>
    </reference>
    <reference evidence="9" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="KF033498">
        <property type="protein sequence ID" value="AGV54487.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DNR1"/>
    <dbReference type="SMR" id="T2DNR1"/>
    <dbReference type="STRING" id="3885.T2DNR1"/>
    <dbReference type="Gramene" id="ESW07947">
        <property type="protein sequence ID" value="ESW07947"/>
        <property type="gene ID" value="PHAVU_009G005800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0BS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIMTADI"/>
    <dbReference type="OrthoDB" id="551672at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd14702">
        <property type="entry name" value="bZIP_plant_GBF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000020">
        <property type="entry name" value="BZIP transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045314">
        <property type="entry name" value="bZIP_plant_GBF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45764">
        <property type="entry name" value="BZIP TRANSCRIPTION FACTOR 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45764:SF76">
        <property type="entry name" value="OS02G0132500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="7">
        <location>
            <begin position="28"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AGV54487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="17822" checksum="3DCCB58C7B69C9EA" modified="2013-11-13" version="1">MASSSGTSSGSSLLQNSGSEEDLQAVMDERKRKRMISNRESARRSRMRKQKHMDDLASLVTQLRNENHQILTSVNLTTQKYLAVESENSVLRAQVSELSHRLESLNEITNFLNATNGVFGPPGPSTTCFLEPEGSAFFNNPFNMAYLSQPIMASADMLQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADS2</accession>
    <name>V7ADS2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G010200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADS2"/>
    <dbReference type="SMR" id="V7ADS2"/>
    <dbReference type="Gramene" id="ESW03390">
        <property type="protein sequence ID" value="ESW03390"/>
        <property type="gene ID" value="PHAVU_011G010200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1650">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VGKINYL"/>
    <dbReference type="OrthoDB" id="754456at2759"/>
    <dbReference type="PhylomeDB" id="V7ADS2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006885">
        <property type="term" value="P:regulation of pH"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1530.20:FF:000025">
        <property type="entry name" value="Cation/H(+) antiporter 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057291">
        <property type="entry name" value="CHX17_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057290">
        <property type="entry name" value="CHX17_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050794">
        <property type="entry name" value="CPA2_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468">
        <property type="entry name" value="CATION/H + ANTIPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468:SF92">
        <property type="entry name" value="CATION_H+ EXCHANGER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23256">
        <property type="entry name" value="CHX17_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23259">
        <property type="entry name" value="CHX17_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0630">Potassium</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="52"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="74"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="172"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="250"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="299"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="331"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="364"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="395"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H+ exchanger transmembrane" evidence="11">
        <location>
            <begin position="36"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter central" evidence="12">
        <location>
            <begin position="509"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter C-terminal" evidence="13">
        <location>
            <begin position="614"/>
            <end position="771"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00038341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF23256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF23259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW03390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="787" mass="87236" checksum="716575D5717C4110" modified="2014-02-19" version="1">MAIAITQCSEKLGYLILQLGKNFLVYMAMVIACNGLHFLLKPYSQPRITSDVVVGIVMGNIPFLRKLYEEFNKTFGFIIDFGMMCYMFALGIELDPYTLFKRPNKEAQVAYWAIFSTMAISLSLTPFLRFFTHYNGLAFAMSLSALLSSSASPVLTRVITSLKIGKSDIGKLVIAAGMHSDLICLVILSLCYIFMPNDIYCIAHQSLRTVKSTIMMCVAVVVQTVFTAAVSPIFMEWVNNENPEGKPMKGSHLVLSVAFMAMICFPSTMYDYSPVLSAFMTGICLPREGRVSKWIISKINYLLTTIFFPIFFLWVGYCADITKLKPLDPVTWIRLIVPVFIVVSGKVIGTLISGAMLDFHWQESVLIGLLLVTKGHFQIYMAMKALNCNHTDSSSTGITSVVTLFFTVVHAPIVVGHIIKRARKRAPTHTNALQLLQPSSELRIFLCLHGLENVPASINFMEISRGISDPGIQIYVAEIIELTEHIAATMESGEGVQTSTIKDKAVIEMREQITNSFQAYVDNDGDGITLKRTMALSTIHNMAQNICVLAEDLMIALIILPFHRTQRQDGKLDAGNPGFRYVNRKLLKNSPCSVGILVNRGFGSLEKISRAEASVKVAAIFIGGKDDREALCYAGRVAWHQGVKVTVIRFLVDTSAESTRLAAYRVSLPEKEEEMGLDDECFAQFYEQHIVGGRIAYLEKHLANASETFSTLKSFEGEYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSKSVSVLIIQQHKIRGEIDGLDEDFTVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AE35</accession>
    <name>V7AE35_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G044900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AE35"/>
    <dbReference type="SMR" id="V7AE35"/>
    <dbReference type="STRING" id="3885.V7AE35"/>
    <dbReference type="Gramene" id="ESW03822">
        <property type="protein sequence ID" value="ESW03822"/>
        <property type="gene ID" value="PHAVU_011G044900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0724">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIESGHI"/>
    <dbReference type="OrthoDB" id="118550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000154">
        <property type="entry name" value="Transcription factor SRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044636">
        <property type="entry name" value="RADIALIS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43952">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43952:SF75">
        <property type="entry name" value="PROTEIN RADIALIS-LIKE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23082">
        <property type="entry name" value="Myb_DNA-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="8"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="7">
        <location>
            <begin position="11"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW03822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="100" mass="11459" checksum="1C9DD47F56730AA7" modified="2014-02-19" version="1">MASSSISKQKPSDSSWTPKQNKLFEKALAKYDKDTPDRWQNVATAVGDKSPDEVKRHYEILLEDLRHIESGHVPLPKYRSTGSSTNVDDEERLLKYLKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFF9</accession>
    <name>V7AFF9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Coiled-coil SMC6 And NSE5 INteracting (CANIN) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G085500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_011G085500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQNM">
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    </dbReference>
    <dbReference type="OMA" id="CITAITR"/>
    <dbReference type="OrthoDB" id="674980at2759"/>
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        <property type="component" value="Chromosome 11"/>
    </dbReference>
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        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="entry name" value="ACTIN PROTEIN 2/3 COMPLEX SUBUNIT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37212:SF2">
        <property type="entry name" value="ACTIN PROTEIN 2_3 COMPLEX SUBUNIT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="458" mass="53012" checksum="C029369C7E4E1E55" modified="2014-02-19" version="1">MDMNDPLDFEVEDDLLKSPAINTKRKKIIGLDDLLQDHYREQNKLLERRNKQTKVKTKKSKTSYDDEDSKEAKLTRLVEKCHKQLKAFGEEEDIRPWGVKVFGDKKAFPPLEFPDLRCCNLLYSFLNNKLNSVVELTVDKGDMFLEGLLVNGWLSKLVFLCGHVEKSVAIWAFNTMLYSSKEELRNSSSDFWCAILSSEKEVNLVPVKIDWFPEYADLRRALDIYGFLFNFSSNSEPNNLDSDIEGPPQNTRAWIRFVTVCCLIRSKKAIFSTVEAEEIVEIIICLFLDRQFLGLLVLLKDCMEAIVNYFTDQEWCSSCENIAKFIACRVSKDLNCIQTIECISEATSRCKQLRSAIAYQTLLSCFDGVKSGEEILRSLAEINFKDKRCDFYNMYIHLVLTENWVLSNSLIEDNPVIYEMFCLYLQNCSTLISATNLRSYASKVRHRASYLLHFSIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AH43</accession>
    <name>V7AH43_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">UGT79B180</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G138500g</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <reference evidence="5" key="3">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Wang H."/>
                <person name="Wang Z."/>
                <person name="Ye M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="OR372727">
        <property type="protein sequence ID" value="WMX26792.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AH43"/>
    <dbReference type="SMR" id="V7AH43"/>
    <dbReference type="Gramene" id="ESW04942">
        <property type="protein sequence ID" value="ESW04942"/>
        <property type="gene ID" value="PHAVU_011G138500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMCESIN"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000037">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000087">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050481">
        <property type="entry name" value="UDP-glycosyltransf_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48049:SF126">
        <property type="entry name" value="ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48049">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW04942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="WMX26792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="448" mass="50023" checksum="A69B7A941A8D3F76" modified="2014-02-19" version="1">MDSSSLHIAMFPWFAMGHLTPFLHLSNKLAKRGHKISFFIPTRTQSKLEQFNLFPDLITFFPINVPHVEGLPHGAETTSDVSFSLGPLIMTAMDRTEKDIELLLLDLKPQIVFFDFTYWLPNITSRLGIKSFQYFIVSPATVSYIRSPQSDLMQPPPGYPVSSIKLHLDEAKFLASKRNWEFGSGVLFYDRFEYGLMLSDAIGFKGCREIEGPYVDYLAEQLGKSVLLSGPIIPEPPNTVLEENWSAWLGGFKDGSVIFCALGSEWKLPHGQFQELLLGLELTGLPFLAVVKVPVGFETIEAALPEGFKEGVEGRGIVHSGWIQQQLILEHSSVGCFITHCGAGSLTEALVNKCQMVLLPQLDADHIINARMMGSNLKVGVEVQKGEEDGWFTKESVSKAVKTVMDEENEVGREVRENHAKLRNCLVSPDLESICVDNFCQKLQDLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHN8</accession>
    <name>V7AHN8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">MLO-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">MLO</name>
        <name evidence="11" type="ORF">PHAVU_011G122800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">May be involved in modulation of pathogen defense and leaf cell death.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the MLO family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHN8"/>
    <dbReference type="SMR" id="V7AHN8"/>
    <dbReference type="STRING" id="3885.V7AHN8"/>
    <dbReference type="Gramene" id="ESW04755">
        <property type="protein sequence ID" value="ESW04755"/>
        <property type="gene ID" value="PHAVU_011G122800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQVW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GIRFWIW"/>
    <dbReference type="OrthoDB" id="1388414at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004326">
        <property type="entry name" value="Mlo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31942:SF57">
        <property type="entry name" value="MLO-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31942">
        <property type="entry name" value="MLO-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03094">
        <property type="entry name" value="Mlo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="6 8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 8" id="KW-0568">Pathogenesis-related protein</keyword>
    <keyword evidence="4 8" id="KW-0611">Plant defense</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="143"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="211"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="297"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="353"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="396"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="444"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="457"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="471"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="538"/>
            <end position="547"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU280816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="571" mass="65384" checksum="AABFD75D8DE20748" modified="2014-02-19" version="1">MDMEEQRSLEETSTWAVSVFCFFFLLTSLIIEGSLHKLAEILRKRKDKSLGRALTKTKTEMMKFGFMSFLLTISEVPISKICISKGVATYFLPCKDAVDLTGLSATRTSTSELDVAHATNQSNVEFNYCEAKGMVSLISSEGILQLNIFISFLAVFHIFFCTLTMCLGKAKMRRWKRWEEETRTLEYQIANDPRRFQYTGQTMIGKRHLNFWSYHSPLLWMVCFIRQFYGSVSKDDYYTLRNGFIAANISLGSNFNFKKFLSRTYDEDFEKVMGIRIWIWIFSILFIFFSAHEFYNYYWLPFIPLMVALLAGTKLQVIITKMCVDSCKANPVIKGSLLVTPSDAHFWFHRPEWLLYLLKFILIQNSFQLAFFTWTWYEFGPRSCFNRENEDIGIRIAMGIAVQLLCGYVTLPLYALVTQMGSSMRREIFTERISRGLKNWHKKAKQTLHKNNSTSSKHSDSLHSKGGDNSARGTMQSVHTPDNVAVTNNPSPSNEGKRIASTNNEQDTSSPSTSEITATEEENPKIITRGTYDGEISFGSSWKNVGSSRGIREIGSITEEDDAEKLPELIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHS3</accession>
    <name>V7AHS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Proteasome subunit alpha type</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G155200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the peptidase T1A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHS3"/>
    <dbReference type="SMR" id="V7AHS3"/>
    <dbReference type="STRING" id="3885.V7AHS3"/>
    <dbReference type="Gramene" id="ESW05137">
        <property type="protein sequence ID" value="ESW05137"/>
        <property type="gene ID" value="PHAVU_011G155200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0182">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGYDMPV"/>
    <dbReference type="OrthoDB" id="431557at2759"/>
    <dbReference type="PhylomeDB" id="V7AHS3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019773">
        <property type="term" value="C:proteasome core complex, alpha-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03754">
        <property type="entry name" value="proteasome_alpha_type_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.10:FF:000036">
        <property type="entry name" value="Proteasome subunit alpha type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034642">
        <property type="entry name" value="Proteasome_subunit_alpha6"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003075">
        <property type="entry name" value="PRK03996.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00388">
        <property type="entry name" value="PROTEASOME_ALPHA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3 5 6" id="KW-0647">Proteasome</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome alpha-type subunits" evidence="7">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW05137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="246" mass="27318" checksum="ACCA2B3B8FD4679E" modified="2014-02-19" version="1">MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTNGYEMPVDVLARWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKGDPAFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTEEIDEHLTAISERD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIA6</accession>
    <name>V7AIA6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G108600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIA6"/>
    <dbReference type="SMR" id="V7AIA6"/>
    <dbReference type="STRING" id="3885.V7AIA6"/>
    <dbReference type="Gramene" id="ESW04593">
        <property type="protein sequence ID" value="ESW04593"/>
        <property type="gene ID" value="PHAVU_011G108600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0028">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTKEMEG"/>
    <dbReference type="OrthoDB" id="343296at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044205">
        <property type="entry name" value="KIC/PBP1/KRP1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN KIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319:SF8">
        <property type="entry name" value="EF-HAND DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13833">
        <property type="entry name" value="EF-hand_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="58"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="13959" checksum="E39076C16B8C576D" modified="2014-02-19" version="1">MAGIAFEDLLPVMATKLGGEGLMKELCNGFELLVDKEKGVITLESLREKAALLGLQDLKEDELVSMMREGDLDGDGALTQMEFCVLMFRLSPELMEESWFWLEEALQHEQLNHHNTTTNNKSSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIP7</accession>
    <name>V7AIP7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G177900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the jagunal family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIP7"/>
    <dbReference type="STRING" id="3885.V7AIP7"/>
    <dbReference type="Gramene" id="ESW05424">
        <property type="protein sequence ID" value="ESW05424"/>
        <property type="gene ID" value="PHAVU_011G177900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4054">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YSFRMVV"/>
    <dbReference type="OrthoDB" id="1915239at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007029">
        <property type="term" value="P:endoplasmic reticulum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009787">
        <property type="entry name" value="Jagunal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20955">
        <property type="entry name" value="PROTEIN JAGUNAL HOMOLOG 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20955:SF1">
        <property type="entry name" value="PROTEIN JAGUNAL HOMOLOG 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07086">
        <property type="entry name" value="Jagunal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW05424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="186" mass="20456" checksum="2EB160A6A8BFAAF1" modified="2014-02-19" version="1">MQNRKLASGRPSGTDGSDYSFRMVVDSRYQLVAKGKKRLSLHFITEAALLLIGAIFAYLPGIEADTQNTVAYSSVFVSVVSLIIGNIGRRRSRSGLLRFYAIVSSIAMVLLIASLAVKHLLLKAILDSKLWRAKYDVNDLSHFQTGNLYFFAGLLLYLVTLSVLKLCTVKAVVSLLLNMAPPKKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL52</accession>
    <name>V7AL52_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Expansin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G010200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Secreted</location>
            <location evidence="7">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the expansin family. Expansin A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL52"/>
    <dbReference type="SMR" id="V7AL52"/>
    <dbReference type="STRING" id="3885.V7AL52"/>
    <dbReference type="Gramene" id="ESW05990">
        <property type="protein sequence ID" value="ESW05990"/>
        <property type="gene ID" value="PHAVU_010G010200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR06">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWCNPGR"/>
    <dbReference type="OrthoDB" id="5823761at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009653">
        <property type="term" value="P:anatomical structure morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009664">
        <property type="term" value="P:plant-type cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22274">
        <property type="entry name" value="DPBB_EXPA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.40.10:FF:000001">
        <property type="entry name" value="Expansin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.760:FF:000001">
        <property type="entry name" value="Expansin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.760">
        <property type="entry name" value="Expansin, cellulose-binding-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="entry name" value="RlpA-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007118">
        <property type="entry name" value="Expan_Lol_pI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002963">
        <property type="entry name" value="Expansin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007112">
        <property type="entry name" value="Expansin/allergen_DPBB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007117">
        <property type="entry name" value="Expansin_CBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036749">
        <property type="entry name" value="Expansin_CBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009009">
        <property type="entry name" value="RlpA-like_DPBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31867">
        <property type="entry name" value="EXPANSIN-A15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03330">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01357">
        <property type="entry name" value="Expansin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01226">
        <property type="entry name" value="EXPANSIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01225">
        <property type="entry name" value="EXPANSNFAMLY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00837">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="Barwin-like endoglucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49590">
        <property type="entry name" value="PHL pollen allergen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50843">
        <property type="entry name" value="EXPANSIN_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50842">
        <property type="entry name" value="EXPANSIN_EG45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0134">Cell wall</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015217355" description="Expansin" evidence="7">
        <location>
            <begin position="22"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like EG45" evidence="8">
        <location>
            <begin position="50"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like CBD" evidence="9">
        <location>
            <begin position="174"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="27811" checksum="123238B5414DE1DA" modified="2014-02-19" version="1">MAEMLSLCIASFVTLFVATNARIPGVYTGGAWQGAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGRPSIIITATNFCPPNLALPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRRVACRKAGGIRFMINGFRYFNLVLISNVAGAGDIVRVSVKGSKSGWNSMSRNWGQNWQSNANLVGQALSFRVTGGDRRTSTSWNVAPSHWQFGQTFTGKNFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMC7</accession>
    <name>V7AMC7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G167200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMC7"/>
    <dbReference type="STRING" id="3885.V7AMC7"/>
    <dbReference type="Gramene" id="ESW05281">
        <property type="protein sequence ID" value="ESW05281"/>
        <property type="gene ID" value="PHAVU_011G167200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="419333at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018881">
        <property type="entry name" value="C2orf69_mit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31296:SF1">
        <property type="entry name" value="MITOCHONDRIAL PROTEIN C2ORF69"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31296">
        <property type="entry name" value="UPF0565 PROTEIN C2ORF69"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="139" mass="15803" checksum="8209858387F567CE" modified="2014-02-19" version="1">MERWSGVLRVPVHPNSRTFHRVGASLCLSPETKMLCERRFKVWLHSSCSFSQPKTFILGFSKGGTVLNQIVTELGFSNLGSNVNSLDVGSEDIYVVPKTKEDILNSISDIHYRISKRLMQGAPQLRFILHGTPRQWSDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANM6</accession>
    <name>V7ANM6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">pyridoxal 5'-phosphate synthase</fullName>
            <ecNumber evidence="4">1.4.3.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G115400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor metabolism; pyridoxal 5'-phosphate salvage; pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor metabolism; pyridoxal 5'-phosphate salvage; pyridoxal 5'-phosphate from pyridoxine 5'-phosphate: step 1/1.</text>
    </comment>
    <dbReference type="EC" id="1.4.3.5" evidence="4"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANM6"/>
    <dbReference type="SMR" id="V7ANM6"/>
    <dbReference type="STRING" id="3885.V7ANM6"/>
    <dbReference type="Gramene" id="ESW07267">
        <property type="protein sequence ID" value="ESW07267"/>
        <property type="gene ID" value="PHAVU_010G115400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4558">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEICWYF"/>
    <dbReference type="OrthoDB" id="434253at2759"/>
    <dbReference type="UniPathway" id="UPA01068">
        <property type="reaction ID" value="UER00304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004733">
        <property type="term" value="F:pyridoxamine phosphate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008615">
        <property type="term" value="P:pyridoxine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="entry name" value="Electron Transport, Fmn-binding Protein, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000659">
        <property type="entry name" value="Pyridox_Oxase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024624">
        <property type="entry name" value="Pyridox_Oxase_Alr4036_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10851">
        <property type="entry name" value="PYRIDOXINE-5-PHOSPHATE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10851:SF3">
        <property type="entry name" value="PYRIDOXINE_PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12766">
        <property type="entry name" value="Pyridox_oxase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50475">
        <property type="entry name" value="FMN-binding split barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyridoxamine 5'-phosphate oxidase Alr4036 family FMN-binding" evidence="8">
        <location>
            <begin position="5"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="196" mass="21988" checksum="083561E00EC287CB" modified="2014-02-19" version="1">MGSVAWKQLLLNALESNAHLKHSSFMQLATIGTNGKPSNRTVVFRGFQDNTDNIQINTDARTRKIEELKLCSSAEICWYFTDSWEQFRINGNVDVIDGSNPDPLKLQQRENSWFASSLRSRSQYLCPNPGLPCLHEQALPDISLDPSTGPIDAFCLVILEPNEVDYLNLKSNQRLTFKSSASAAAKNSWTVERVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7APN3</accession>
    <name>V7APN3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UV-B-induced protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G023700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APN3"/>
    <dbReference type="SMR" id="V7APN3"/>
    <dbReference type="STRING" id="3885.V7APN3"/>
    <dbReference type="Gramene" id="ESW06146">
        <property type="protein sequence ID" value="ESW06146"/>
        <property type="gene ID" value="PHAVU_010G023700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPS7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRWEHSI"/>
    <dbReference type="OrthoDB" id="25131at2759"/>
    <dbReference type="PhylomeDB" id="V7APN3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038925">
        <property type="entry name" value="At3g17800-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008479">
        <property type="entry name" value="DUF760"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31808">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31808:SF9">
        <property type="entry name" value="F21O3.2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05542">
        <property type="entry name" value="DUF760"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="392" mass="44122" checksum="1D0A0C914BDE96A5" modified="2014-02-19" version="1">MENCVIHHHHHALLALPSSSHKPHFRFFTRPDFGGGGGGGAFSFSSSCLLHSRRRPFIRSSAGASPCEFSSLNSPLEPRSMVGKFLSGVLQNHPQMFHVAVGEELKLLAEDRDAAHARMVLGSVTDEALLHRRIAQLKENQCQIAVEDVMYLLIFYKFSEIRVPLVPKLSSCLYNGRLEILPSKDWELESIHSLEVLDMIREHITTVTGLKAKSSVTESWATTQVRQFLLARVYVASILYGYFLKSVSLRYHLERNLSLADHDIHLGHRTSLMCSYGLKDAIFGHLSNMPSLGQGLIRPEEEVEDLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNKESGSFENDDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ60</accession>
    <name>V7AQ60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mitochondrial glycoprotein family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G159900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ60"/>
    <dbReference type="SMR" id="V7AQ60"/>
    <dbReference type="STRING" id="3885.V7AQ60"/>
    <dbReference type="Gramene" id="ESW07797">
        <property type="protein sequence ID" value="ESW07797"/>
        <property type="gene ID" value="PHAVU_010G159900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2536">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAWLIRP"/>
    <dbReference type="OrthoDB" id="278212at2759"/>
    <dbReference type="PhylomeDB" id="V7AQ60"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.280.10:FF:000003">
        <property type="entry name" value="Mitochondrial glycoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.280.10">
        <property type="entry name" value="Mitochondrial glycoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003428">
        <property type="entry name" value="MAM33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036561">
        <property type="entry name" value="MAM33_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10826">
        <property type="entry name" value="COMPLEMENT COMPONENT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10826:SF36">
        <property type="entry name" value="OS08G0439900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02330">
        <property type="entry name" value="MAM33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54529">
        <property type="entry name" value="Mitochondrial glycoprotein MAM33-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="236" mass="27405" checksum="062E1D42725DD594" modified="2014-02-19" version="1">MARLIRSLRKSLTLTLTHQFHHQQQPQLCISHHLFRRSYISEMRKSAFEGNILRLLRNEIQYELQSSPPNDPVTKFGSFMVDGRAGERWITLKKRYADEDIKLEVTMFDGALPAPTQTPDGGVINSDEMQMHITVIVTISKGEGDGVLQITCSAWPDDVEIKKVFIRANENIIDEAYVGPEFTELDDALQDSLYDFLEVRGINDELAVFLHQYMKHKDKTEYVRWMERVKSFIERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQF0</accession>
    <name>V7AQF0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G0007000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQF0"/>
    <dbReference type="OrthoDB" id="1153057at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="41" mass="4631" checksum="3E3D7D9AE1BEF967" modified="2014-02-19" version="1" fragment="single">MAGKPETQIRPISNIVIVVAMEMEALPIVNRFRLTRQPHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQL1</accession>
    <name>V7AQL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">YGGT family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G163400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQL1"/>
    <dbReference type="SMR" id="V7AQL1"/>
    <dbReference type="STRING" id="3885.V7AQL1"/>
    <dbReference type="Gramene" id="ESW07844">
        <property type="protein sequence ID" value="ESW07844"/>
        <property type="gene ID" value="PHAVU_010G163400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXHG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHAFRFH"/>
    <dbReference type="OrthoDB" id="2066at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010020">
        <property type="term" value="P:chloroplast fission"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003425">
        <property type="entry name" value="CCB3/YggT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33219:SF10">
        <property type="entry name" value="OS07G0185300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33219">
        <property type="entry name" value="YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02325">
        <property type="entry name" value="CCB3_YggT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="204" mass="21767" checksum="F0A17E58F7D39681" modified="2014-02-19" version="1">MAMASSVAVPSHALRFHTFFSRTAPSSSSFNLRSQPQPLCVRCHCNGPPPPVIASTETLSDLLRGSTRTLTTLMGLAVLVAKSVPVGNWSGISGNAVSTIGPLFFAAVRARPSGALNTPLTVVAAGLGKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILQTAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARP0</accession>
    <name>V7ARP0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G036300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARP0"/>
    <dbReference type="SMR" id="V7ARP0"/>
    <dbReference type="STRING" id="3885.V7ARP0"/>
    <dbReference type="Gramene" id="ESW08322">
        <property type="protein sequence ID" value="ESW08322"/>
        <property type="gene ID" value="PHAVU_009G036300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQVU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INIPVCH"/>
    <dbReference type="OrthoDB" id="608866at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47206">
        <property type="entry name" value="HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47206:SF1">
        <property type="entry name" value="HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="5">
        <location>
            <begin position="197"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="4">
        <location>
            <begin position="197"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="364"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="364"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="405"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="455"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="499"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="534"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="552"/>
            <end position="569"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW08322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="586" mass="63771" checksum="5D36ED8A40C393E2" modified="2014-02-19" version="1">MSEKKNKVSYTEKDAVALMQRYDPTTVFILLQEVAHYAKPKIDWNELVKKSATGISNVREYQMLWRHLAYRHSLPEDFEVGAEPLDDDSDLECELEALPPVSGESASEAAACVKVMIASRTLSESAPSSSTIEAPLTINIPVCHSSRTLIESSQPSNLMQGTNIVFPVTVQRQTLPTHPAPSTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTTAEQLATRHSLSLALDMPLKKLTAPGVSDPVKTSISVKNQMQNRNMVEKVVTSFVPPQQSSQHPSLLGSSDPYVKPKLVDEKLVPKGNIISNPVLKSTTAASGTRTDPPSNPPSNTVSQFKMAPVKHSEDAKPAVSSLTKPSISANLPSDLKNKPVPPLADKVTWKQGVNSTKEFRAFDPTSAPKETPKETTQKEPPKVTIGSQINNNLDKGRLDTGQGKIKPISSGEAGLKDKANPVTDEKSAIKANAEVYEDEGSVKNASDNSKLDKESLTFNEDKKHSINESSNNQTINDKNVNLSLQDEDSQSAKVVKTDGGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARP1</accession>
    <name>V7ARP1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G0298001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARP1"/>
    <dbReference type="Gramene" id="ESW08229">
        <property type="protein sequence ID" value="ESW08229"/>
        <property type="gene ID" value="PHAVU_009G0298001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="20" mass="2379" checksum="30F09A97BD01059E" modified="2014-02-19" version="1" fragment="single">QFLGRLVEWKRSSSVKCIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU24</accession>
    <name>V7AU24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Homeobox domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G077100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TALE/BELL homeobox family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU24"/>
    <dbReference type="SMR" id="V7AU24"/>
    <dbReference type="Gramene" id="ESW08813">
        <property type="protein sequence ID" value="ESW08813"/>
        <property type="gene ID" value="PHAVU_009G077100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08814">
        <property type="protein sequence ID" value="ESW08814"/>
        <property type="gene ID" value="PHAVU_009G077100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08815">
        <property type="protein sequence ID" value="ESW08815"/>
        <property type="gene ID" value="PHAVU_009G077100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0773">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEHQIWR"/>
    <dbReference type="OrthoDB" id="10056939at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008422">
        <property type="entry name" value="KN_HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006563">
        <property type="entry name" value="POX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050224">
        <property type="entry name" value="TALE_homeobox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11850">
        <property type="entry name" value="HOMEOBOX PROTEIN TRANSCRIPTION FACTORS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05920">
        <property type="entry name" value="Homeobox_KN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07526">
        <property type="entry name" value="POX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00574">
        <property type="entry name" value="POX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 8" id="KW-0371">Homeobox</keyword>
    <keyword evidence="7 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="9">
        <location>
            <begin position="459"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="8">
        <location>
            <begin position="461"/>
            <end position="523"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="62509" checksum="ABC0AD8D2C07D552" modified="2014-02-19" version="1">MERDIYIAPLDISGRGATVIDEISQHSTSNPLIQCYSLDLNNQSHVMNGISMLSGEQVEPISNVHADACFINQSIIADSSPLVTSRRKSIVGDASNPMENTEFLEHLVGGVPLTPASLAAILAARIGLEEDLENSAALPPSICSTGALEVFFNNLQGTSNPLSATFEDCDYNEVPSKWNANKFHKAPEIGGTCEPYSSIANLDPNEWTTSNVANMASYAYCSSNFSKELSLSLATSTTAGQYSEVTCSNMTPCMNGTISCSSSRQLSMNLGGNKYVQFSPEVLESRYLLGIQEILAQIARYSFENLKQLNYSAPGNRAGGNRSASAFPPMRNILTDHNANSIYESHAESPLQRRVAESKKAQLLTLLQLVDNRYSQCLDEIHTVISAFHAATELDPQIHAHFALQTISVLYKDLRERISNYILAMGSSFNKSCAEENEWSIETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGIQNNHGNRIGMSNQRFNVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUL3</accession>
    <name>V7AUL3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="19">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="19">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_009G092900g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="19"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUL3"/>
    <dbReference type="SMR" id="V7AUL3"/>
    <dbReference type="STRING" id="3885.V7AUL3"/>
    <dbReference type="Gramene" id="ESW09010">
        <property type="protein sequence ID" value="ESW09010"/>
        <property type="gene ID" value="PHAVU_009G092900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUXB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YIGFWIY"/>
    <dbReference type="OrthoDB" id="1668230at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000248">
        <property type="entry name" value="S-receptor-like kinase 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000008">
        <property type="entry name" value="Serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051343">
        <property type="entry name" value="G-type_lectin_kinases/EP1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47976">
        <property type="entry name" value="G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47976:SF114">
        <property type="entry name" value="RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 19 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="16" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10 19" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0430">Lectin</keyword>
    <keyword evidence="13 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 19 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-0675">Receptor</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 19" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 23" id="KW-0732">Signal</keyword>
    <keyword evidence="5 19" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 22" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="23">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754096" description="Receptor-like serine/threonine-protein kinase" evidence="23">
        <location>
            <begin position="24"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="426"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="25">
        <location>
            <begin position="36"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="24">
        <location>
            <begin position="490"/>
            <end position="775"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="21">
        <location>
            <begin position="789"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="519"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW09010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="814" mass="88984" checksum="678B4858559BB746" modified="2014-02-19" version="1">MGKHRSFLHIVGTVLLLCKFCFAANQYTGRVLPGGIKGSQMNWIDRNGVFLVSNEGQFSFGFVTTANDTTLFLLSIAHLATSRVVWSANRAVPVANSDNFVFDDKGNAFLQKDGTVVWSTNTSGKGVSSMELRDTGNLVLLGSDNSTVIWQSFGVPTDTLLPTQEFTEGMKLVSDPSKNNLTHILEIKSGVVVLSASFGTPQPYWTMQTDSRRIINTGGDEVASANISKNSWRFYDKSKSLLWQFIFSSGPDSNATWIAVLGSDGFITFSTLGSGASNAASEKIPEDPCGIPEPCEAYSICTAKRCSCPSVIPNCKTGFDSPCGGDSEKSIQLVKADDGLDYFALQFLQPFSKTDLAGCQTSCSGNCSCVAMFFHRSSGNCFLLDSVGSFEKPDSDPGYVSYIKVSSEGGSGSGSGGGGSGNKHTIVVVIIVMITLFVIGGLVFWGVRYQRRKQRLPESPTDGSEEANFLENLTGMPIRYSYKDLETATNNFSVKLGQGGFGSVYKGVLPDGTQIAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCADGTHRLLAYEYMPNGSLDKWIFKKKKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDEHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDANESSEKSHFPTFAFKMMEEGKLRDIFDSELRIDENDDRFQCAIKVALWCIQEDMSMRPSMSRVVQMLEGLSTVPNPPITSFLGSRLYATVFKSSSEGATSSAPSDGNSDAYLSAVRLSGPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUP2</accession>
    <name>V7AUP2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G094800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUP2"/>
    <dbReference type="STRING" id="3885.V7AUP2"/>
    <dbReference type="Gramene" id="ESW09035">
        <property type="protein sequence ID" value="ESW09035"/>
        <property type="gene ID" value="PHAVU_009G094800g"/>
    </dbReference>
    <dbReference type="OMA" id="SKCAFDI"/>
    <dbReference type="OrthoDB" id="672127at2759"/>
    <dbReference type="PhylomeDB" id="V7AUP2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004158">
        <property type="entry name" value="DUF247_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170:SF23">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170">
        <property type="entry name" value="BNAC04G53230D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03140">
        <property type="entry name" value="DUF247"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="309"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="38932" checksum="882015C2EA410529" modified="2014-02-19" version="1">MTNNKEQKDVVIDIRKKLEGVGPAVTEGCSIYRVPFDIRKHNEDAYTPKIVSIGPLHHNTHPRLQSMERHKLIYCKAFLERTKTSLDNWIRYIEEIEPDFRRCYSDTLEFRKEELVQIILVDSGFIFELFWKGYHEEIEKGTFLSIPLIEDTIAVDLLLFENQLPFYVLNHLFTQSFTTTSSDGGVLQMPQLKVEDRTEVLFRNMVALEQCHYPHESFITDYVVILDFLINTSRDVETLVQQKVLVNWTGDTETVVNLFNSLAKNISQSDINCNYYTLSEDLSHFYDNICNKLKSTLRRDYCNSPWQTAATTAAIVLLILSVIQTVCSVLSVLPQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUW9</accession>
    <name>V7AUW9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Ubiquitin carboxyl-terminal hydrolase 26</fullName>
            <ecNumber evidence="4">3.4.19.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Deubiquitinating enzyme 26</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Ubiquitin thioesterase 26</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">Ubiquitin-specific-processing protease 26</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_009G100000g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Deubiquitinates H2BK143ub1 of histone H2B.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUW9"/>
    <dbReference type="STRING" id="3885.V7AUW9"/>
    <dbReference type="Gramene" id="ESW09100">
        <property type="protein sequence ID" value="ESW09100"/>
        <property type="gene ID" value="PHAVU_009G100000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1863">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSCEEMP"/>
    <dbReference type="OrthoDB" id="289038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02668">
        <property type="entry name" value="Peptidase_C19L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01795">
        <property type="entry name" value="Ubl_USP48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2230.10:FF:000005">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000049">
        <property type="entry name" value="ubiquitin carboxyl-terminal hydrolase 48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2230.10">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035927">
        <property type="entry name" value="DUSP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033841">
        <property type="entry name" value="Pep_USP48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006615">
        <property type="entry name" value="Pept_C19_DUSP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044743">
        <property type="entry name" value="Ubl_USP48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF722">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06337">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00695">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143791">
        <property type="entry name" value="DUSP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51283">
        <property type="entry name" value="DUSP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="17">
        <location>
            <begin position="86"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="DUSP" evidence="18">
        <location>
            <begin position="480"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="domain" description="DUSP" evidence="18">
        <location>
            <begin position="587"/>
            <end position="694"/>
        </location>
    </feature>
    <feature type="domain" description="DUSP" evidence="18">
        <location>
            <begin position="715"/>
            <end position="835"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="16">
        <location>
            <begin position="940"/>
            <end position="1006"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00056392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00071636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00075174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00078771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00082179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW09100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1049" mass="117894" checksum="4FEF417DA1C298BF" modified="2014-02-19" version="1">MSFLDRKIHNSGVVAEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALIPPQNGTRKSGLWQKMSDFVESLGHDPTKDLRATANCPAGLTNLGATCYANSILQCLYMNQSFREGIFSLERDVLEQQAVLDQLTRLFVQLHVSKMAFIDSSPFVRTLELDNGVQQDSHEFLTLLLSLLEACLSHSKVPKARRIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDQSLDEYLTVEELNGDNQYFCESCKGRVDATRSIKLCTLPKVLNFQLKRYVFLPKTTTKKKISSAFSFPSELDMRHRMSELSQFDLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGCHPFGEGSSNSTSKSVKTDAIHSNCSQATDSNGNGLNASHSQSSPVETFLSSDAYMLMYHLKHTKMLHDEREGVEVALQNGASLASHLCNEIQNFNVSYDEACQEYNKKKELELGRITGRRQEVRSVLAEAPVQPLEKPFYWISSEWLRQWADNIIPVPLDNSSVQCSHGKVPVSKITSMKRVSAKAWDTLFSKYGGGPALSHDNHCLDCLIHGAMTVVSADTYRDRRESMKSLARDILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPTAPISCPHDELLPEKAPGAKRVLIPESFWFFLYEDAVSVKPDDPLGGPSFSSDSKECSQCSNELSEVACLEDSLRLVKQKQRQNHDKLFQAKSLPLSLNCKYFLVPSSWISQWRNYINPTLKNSDKPETLDGAIDSLLCEKHSQLLERPPELVFRRGAIIQRESSVGGLTIVSENDWKCFCEEWGGIENKGIFATIDHTNDPDNVLTGSSEEMLICKDQLGTEDKMNYDNGTGQIFIKTCPEVCESCIGERESCKLMQKLNYCNEDICVILVRGKEVPRSMLEASKGFVETDRRVSKRSRKTKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDSDNECVTLADVNIFAGNQIIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTANVSSQVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AV20</accession>
    <name>V7AV20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Endoglucanase</fullName>
            <ecNumber evidence="9">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G016100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the glycosyl hydrolase 9 (cellulase E) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="9"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AV20"/>
    <dbReference type="SMR" id="V7AV20"/>
    <dbReference type="STRING" id="3885.V7AV20"/>
    <dbReference type="Gramene" id="ESW08076">
        <property type="protein sequence ID" value="ESW08076"/>
        <property type="gene ID" value="PHAVU_009G016100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQZQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IDHKYAY"/>
    <dbReference type="OrthoDB" id="10257085at2759"/>
    <dbReference type="PhylomeDB" id="V7AV20"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.10:FF:000020">
        <property type="entry name" value="Endoglucanase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001701">
        <property type="entry name" value="Glyco_hydro_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018221">
        <property type="entry name" value="Glyco_hydro_9_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22298">
        <property type="entry name" value="ENDO-1,4-BETA-GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00759">
        <property type="entry name" value="Glyco_hydro_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="Six-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00592">
        <property type="entry name" value="GH9_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 9" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="6 8 9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 8 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 8 9" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 9" evidence="11">
        <location>
            <begin position="58"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW08076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="529" mass="57683" checksum="F45F91632E0E3539" modified="2014-02-19" version="1">MGEKSKSKGGCCGWFIAFVILAIVVGAVVYTVKKKFGHSGSDKAAPVPGPPGAVDQKYATALKTSLQFFDIQKSGKLVNNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHIKFGFPMAFTATVLSWAILEYGDQMDHVGQLVSAQDSLKWVTDYLISAHPSANVLYIQVGDPVADHKCWERPEDMTEARPLIQVNESYPGSDIAAETAAAMASASLVFKKTDSAYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYADWGSPTWFSWDNKLAGTQVLLSRLSFFKAKDISNSYGSGLQSYRKTAEAVMCGLLPDSPTATKSRTDEGLIWVSQWNSLQQPVASAFLAVVYSDYMLTSQTPKLKCDSDSYTPSDLRDFAKSQADYVLGKNPMDMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFKWLDSSDPNPNVATGALVGGPFLNETFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSVVQSFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVB7</accession>
    <name>V7AVB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G141200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVB7"/>
    <dbReference type="Gramene" id="ESW09607">
        <property type="protein sequence ID" value="ESW09607"/>
        <property type="gene ID" value="PHAVU_009G141200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SMCQSGQ"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932">
        <property type="entry name" value="ATPASE EXPRESSION PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932:SF2">
        <property type="entry name" value="OS10G0484300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="131"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="166"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="201"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="236"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="271"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="306"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="376"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="411"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="494"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="529"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="625"/>
            <end position="659"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="719" mass="82108" checksum="937D19B1761C8024" modified="2014-02-19" version="1">MLAFSRFRKAAEVSCVFCRNQKPPTYLRRFSLPSEEPPISDPHLPLRLCISVALKLGTFSTLKYRGLVSEVICTNNWFSLYWEGLEHIKKSGVFISSDSVYVLIRAYWQVGLAEKAIESFGRMGEVGSVPDAHAYNIILDIAFKKELFVLALAVYNLMLKSNCCPSERIYNMLIGGFCRSEDVNGALAMLHEMGQRDVEPSEMTYFAIVFGLCRARRVHEAHRTFNVMKERGYRLNSMSYCVLINEYCKMGRSDEAVSILQSLEKDGLPLDIKGYSHLIAGFFRERRYNEAHSWYGRMLKKGVVPDVVLYTVMIRGLSSEGRIGEAVKMFCEMTQQGLVPDAVCYNEVIKGFCDAGLLDRARSLQLQISEHEGFHNVCTHTILICDLCKRGMVDEAQEIFNRMEKSGCFPSLVTFNTLIYGLCKAGKLEEAHLMWYKMEMGRSPSLFFRLSRGSNQVLDRVSLRKKVEQMCETGQLLDAYKFLIQLADSGVMSDIVTYNVLLYGFCRASKLNGALKLFKDMQDKGPSPDSVTYGTLIDGLFRVGREEDALKMYEHMLKHGCQPSFEVYKALMTWLSRNKKVSQAISYYLSFLKNLRGREGDSINVLEGYFVRGEVEQAIRGLLELDFSCVYLIEGLCRKGRLDDAVNIFLYALEKGFVMRSRICERLLKCLLCSPDKRGYAIDLVRWMESAGYLLNKFGWYKTQLVQSRTSNTIDFLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVG0</accession>
    <name>V7AVG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G026800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVG0"/>
    <dbReference type="SMR" id="V7AVG0"/>
    <dbReference type="STRING" id="3885.V7AVG0"/>
    <dbReference type="Gramene" id="ESW08196">
        <property type="protein sequence ID" value="ESW08196"/>
        <property type="gene ID" value="PHAVU_009G026800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0715">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHRVNPM"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000141">
        <property type="entry name" value="Chaperone protein dnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050817">
        <property type="entry name" value="DjlA_DnaK_co-chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24074">
        <property type="entry name" value="CO-CHAPERONE PROTEIN DJLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="75"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="268" mass="31310" checksum="F389653A7828D690" modified="2014-02-19" version="1">MSNLRTLCRPQTVFSFISCRHQFRSRVLFPNPNCKSRLTSPFLYSTIGSWGSNPWFRVNQRRTVAKASNWAEQKSPYETLELEGDADEEQIKNAYRRLAKFYHPDVYDGRGNLEEGETAEARFIKIQAAYELLIDGERRRQYDVDNRVNPMKASQAWMDWLIKKGKAFDQRGDMAIVAWAEQQQRELNLRVRQLSHSKTDPEEARKILAREKKASADYYSNTLKRHTLVLKKRDLMRRKAEEEKKTTISRLLAAEGLELDDSDSDEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVM7</accession>
    <name>V7AVM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phytocyanin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G062600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVM7"/>
    <dbReference type="SMR" id="V7AVM7"/>
    <dbReference type="STRING" id="3885.V7AVM7"/>
    <dbReference type="Gramene" id="ESW08648">
        <property type="protein sequence ID" value="ESW08648"/>
        <property type="gene ID" value="PHAVU_009G062600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S16H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWRAGTN"/>
    <dbReference type="OrthoDB" id="1839683at2759"/>
    <dbReference type="PhylomeDB" id="V7AVM7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003245">
        <property type="entry name" value="Phytocyanin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34052">
        <property type="entry name" value="GLYCINE-RICH PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34052:SF2">
        <property type="entry name" value="PLASTOCYANIN-LIKE DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02298">
        <property type="entry name" value="Cu_bind_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51485">
        <property type="entry name" value="PHYTOCYANIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753799" description="Phytocyanin domain-containing protein" evidence="1">
        <location>
            <begin position="26"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Phytocyanin" evidence="2">
        <location>
            <begin position="29"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="143" mass="15606" checksum="6673F0E6D766A20E" modified="2014-02-19" version="1">MDFSSSRILAQGVFVLLVLSSVAEGTEPRTILVGDSEGWRAGTNYTQWAIQNSPFHINDTLVFKYPPPGNSTVTQSVYLLPDLWSYITCEFRGAKVLGNASEGRDEGFKVALTELKSYYFASAEGNSYDCLAGLTKFTAVPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXA0</accession>
    <name>V7AXA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Aspartyl aminopeptidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G167900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase M18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXA0"/>
    <dbReference type="SMR" id="V7AXA0"/>
    <dbReference type="STRING" id="3885.V7AXA0"/>
    <dbReference type="MEROPS" id="M18.A01"/>
    <dbReference type="Gramene" id="ESW09930">
        <property type="protein sequence ID" value="ESW09930"/>
        <property type="gene ID" value="PHAVU_009G167900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2596">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPILKVN"/>
    <dbReference type="OrthoDB" id="9880441at2759"/>
    <dbReference type="PhylomeDB" id="V7AXA0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05658">
        <property type="entry name" value="M18_DAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.250.10:FF:000001">
        <property type="entry name" value="Aspartyl aminopeptidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.250.10">
        <property type="entry name" value="Aminopeptidase i, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.10">
        <property type="entry name" value="Zn peptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001948">
        <property type="entry name" value="Peptidase_M18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023358">
        <property type="entry name" value="Peptidase_M18_dom2"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002759">
        <property type="entry name" value="PRK02813.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28570">
        <property type="entry name" value="ASPARTYL AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28570:SF16">
        <property type="entry name" value="ASPARTYL AMINOPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02127">
        <property type="entry name" value="Peptidase_M18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00932">
        <property type="entry name" value="AMINO1PTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101821">
        <property type="entry name" value="Aminopeptidase/glucanase lid domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53187">
        <property type="entry name" value="Zn-dependent exopeptidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 9" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW09930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="481" mass="52862" checksum="AAC82827EC9856F4" modified="2014-02-19" version="1">MAKQQSHDVVSDLIDFLNASPTAFHAVDVAKQRLQSAGFQQLSERELWELQPGNKYFFTRNHSTIVAFAIGKKYVAGNGFYIIGAHTDSPCLKLKPVSKVVKGGILEVGVQIYGGGLWHTWFDRDLTVAGRVILREENAGSVSYSHHLVRIEEPIMRIPTLAIHLDRTVSDGFKFNNETHLIPILATALKGELNKLSSENGNQTDVKKASDKTGTANTKHHLLLLQLLASKLGCETDDIYDFELQACDTQPSTVGGAAKEFIFSGRLDNLCMSFCSLKALIDATSSESSLEEETGVRMVALFDHEEVGSDSAQGAGSPVMLNAVTRVTNSFGTKPNLLEKAAQRSYLVSADMAHALHPNYMEKHEANHQPKLHGGLVIKNNANQRYATNIVTSFLFREIASKHNLPVQDFVVRNDMSCGSTIGPILASGVGIRTVDVGAPQLSMHSIREVCAVDDVKYSYEHFKAFYQEFSHLDGKMVVDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYW2</accession>
    <name>V7AYW2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G241500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYW2"/>
    <dbReference type="Gramene" id="ESW10832">
        <property type="protein sequence ID" value="ESW10832"/>
        <property type="gene ID" value="PHAVU_009G241500g"/>
    </dbReference>
    <dbReference type="OMA" id="NSCGCRI"/>
    <dbReference type="OrthoDB" id="1354999at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756051" evidence="2">
        <location>
            <begin position="20"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="56" mass="6637" checksum="AB0C6B99FC248AC7" modified="2014-02-19" version="1">MKLVAFYLLFILLPSFNSCGCRISSRRKYRFSLLSWIMPTGMFLFPFLVLVVPDDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZX4</accession>
    <name>V7AZX4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Isoflavone 2'-hydroxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G244200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZX4"/>
    <dbReference type="SMR" id="V7AZX4"/>
    <dbReference type="STRING" id="3885.V7AZX4"/>
    <dbReference type="Gramene" id="ESW10860">
        <property type="protein sequence ID" value="ESW10860"/>
        <property type="gene ID" value="PHAVU_009G244200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHDIAFA"/>
    <dbReference type="OrthoDB" id="1055148at2759"/>
    <dbReference type="PhylomeDB" id="V7AZX4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd20653">
        <property type="entry name" value="CYP81"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000023">
        <property type="entry name" value="Cytochrome P450 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050651">
        <property type="entry name" value="Plant_Cytochrome_P450_Monoox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947">
        <property type="entry name" value="CYTOCHROME P450 82C3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947:SF24">
        <property type="entry name" value="ISOFLAVONE 2'-HYDROXYLASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9 10" id="KW-0349">Heme</keyword>
    <keyword evidence="6 9 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754291" description="Isoflavone 2'-hydroxylase" evidence="11">
        <location>
            <begin position="27"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="9">
        <location>
            <position position="436"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW10860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="500" mass="57737" checksum="3C5607324AFD2E55" modified="2014-02-19" version="1">METLPFFTYFLFFLLSLLITFKLCLQRTKHKNLPPGPPPLPIIGNLNLLQRPLHRFLQRMSQTHGHVFSLWFGSRLAVVVSSPSAFQECFTKNDVALANRPRSLSGKHIFYNYSTVGSCSYGDLWRNLRRITSLDVLSTQRIHSFAGIRKDETDRMVRALATASRVEYARVEMSSMFHDMTYNSMMRMVAGKRYYGEEIQAKDLEEAKEFRETVEGLLQLAGVSNKADYLPFLRWFDFQNLEKRLKSIHKRFDTFLDALIHEQRNKKERENTMIHHLLTLQESQPQYYSDQIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNHPEVLQKAREELEFHVKDRLVNESDLPKLTYLKKIILETLRLHPPAPLAIPHVSSEEVSIEGFNVPADTMVMINIWAMQRDPALWKEATCFKPERFDEEGLEKKVIAFGMGRRACPGEGLALQNVGLSLGLLIQCFDWKRVNEDEIDMREANWFTLSRLTPLNAMCKALPLVDQIMTFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1H6</accession>
    <name>V7B1H6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">3-ketoacyl-CoA synthase</fullName>
            <ecNumber evidence="10">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G199000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a very-long-chain acyl-CoA + malonyl-CoA + H(+) = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:32727"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:90725"/>
            <dbReference type="ChEBI" id="CHEBI:90736"/>
            <dbReference type="EC" id="2.3.1.199"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1H6"/>
    <dbReference type="SMR" id="V7B1H6"/>
    <dbReference type="STRING" id="3885.V7B1H6"/>
    <dbReference type="Gramene" id="ESW10316">
        <property type="protein sequence ID" value="ESW10316"/>
        <property type="gene ID" value="PHAVU_009G199000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPKZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INHYQLR"/>
    <dbReference type="OrthoDB" id="329835at2759"/>
    <dbReference type="PhylomeDB" id="V7B1H6"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000028">
        <property type="entry name" value="3-ketoacyl-CoA synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036417">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="74"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="FAE" evidence="12">
        <location>
            <begin position="93"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="13">
        <location>
            <begin position="399"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR036417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW10316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="510" mass="57704" checksum="9A0C2C55F3D6675A" modified="2014-02-19" version="1">MEETKADTPLMPPSSRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSLKDLRDIWENLQYNLISVILCSTMIVFLSTLYIMTRPRPVYLVNFSCYKPEEARKCSKKIFMDQSRRSGFFTEENLEFQRKILERAGLGESTYFPEAVLNDPPNPSMQEARKEAELVMFGAIDELFSKTFVKPKDIGLLIVNCSLFCPTPSLSAMIINHYKLRGNIKSLNLGGMGCSAGLISIDLAKDLLQVHPNSYALVVSTENITLNWYPGNDRSKLVSNCLFRMGGAAILLSNKSSDKRRSKYRLVDTVRTNKASDDKCFGCVIQEEDSNGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSTWHMEPSRMTLYRFGNTSSSSLWYELSYAEAKGRIRKGDRTWQIAFGSGFKCNSAVWKALRTINPAKERNPWMDEIHNFPVEVPRISSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2A9</accession>
    <name>V7B2A9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G049600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclin family. Cyclin U/P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2A9"/>
    <dbReference type="SMR" id="V7B2A9"/>
    <dbReference type="STRING" id="3885.V7B2A9"/>
    <dbReference type="Gramene" id="ESW11670">
        <property type="protein sequence ID" value="ESW11670"/>
        <property type="gene ID" value="PHAVU_008G049600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1674">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQTYCAY"/>
    <dbReference type="OrthoDB" id="337735at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019901">
        <property type="term" value="F:protein kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd20604">
        <property type="entry name" value="CYCLIN_AtCycU-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012389">
        <property type="entry name" value="Cyclin_P/U"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013922">
        <property type="entry name" value="Cyclin_PHO80-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15615">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15615:SF116">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08613">
        <property type="entry name" value="Cyclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF027110">
        <property type="entry name" value="PREG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 5" id="KW-0195">Cyclin</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR027110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW11670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="204" mass="23241" checksum="DD013D3F1D65E9F2" modified="2014-02-19" version="1">MAELESPTVMPKLISFLSSLLKRVAESNDLNQQQLHQKISVFHGLTRPTISIQTYLERIFKYANCSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGGITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQREMLLIQPLTFVDSSLSLGKSLKAHLCFNEDESSSHQKQQQLAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2T2</accession>
    <name>V7B2T2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Macrophage migration inhibitory factor-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G092400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MIF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2T2"/>
    <dbReference type="SMR" id="V7B2T2"/>
    <dbReference type="STRING" id="3885.V7B2T2"/>
    <dbReference type="Gramene" id="ESW12192">
        <property type="protein sequence ID" value="ESW12192"/>
        <property type="gene ID" value="PHAVU_008G092400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1759">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WLSIPRT"/>
    <dbReference type="OrthoDB" id="255819at2759"/>
    <dbReference type="PhylomeDB" id="V7B2T2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050178">
        <property type="term" value="F:phenylpyruvate tautomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.429.10:FF:000004">
        <property type="entry name" value="Tautomerase/MIF superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="entry name" value="Macrophage Migration Inhibitory Factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001398">
        <property type="entry name" value="Macrophage_inhib_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11954">
        <property type="entry name" value="D-DOPACHROME DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11954:SF25">
        <property type="entry name" value="LS1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01187">
        <property type="entry name" value="MIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="Tautomerase/MIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12264" checksum="E894BE9BBDBCDD0B" modified="2014-02-19" version="1">MPSLYITTNLNLDGVDTDPIFSEATTAVSTIIGKPEKFVMVILKSSVPISFENSKEPAAYAEIVSMGGINSEVKRKLIATLGTILQSKLSIPRTRFFLKVFDTTAFSTKSRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2Y5</accession>
    <name>V7B2Y5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CASP-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G012300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3 8">Homodimer and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Cell membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the Casparian strip membrane proteins (CASP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2Y5"/>
    <dbReference type="STRING" id="3885.V7B2Y5"/>
    <dbReference type="Gramene" id="ESW11223">
        <property type="protein sequence ID" value="ESW11223"/>
        <property type="gene ID" value="PHAVU_008G012300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S98H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTNTMEI"/>
    <dbReference type="OrthoDB" id="685197at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006702">
        <property type="entry name" value="CASP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573">
        <property type="entry name" value="CASP-LIKE PROTEIN 4A4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573:SF40">
        <property type="entry name" value="CASP-LIKE PROTEIN 4D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04535">
        <property type="entry name" value="CASP_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="58"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="103"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Casparian strip membrane protein" evidence="9">
        <location>
            <begin position="12"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW11223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="166" mass="18045" checksum="6B785140985E0507" modified="2014-02-19" version="1">MADSSPSSSTVSRTALLLLRVLTFVFLLIALILIAVANQTNDQTGDKINFSDFYTYRYMISTIIIGFVYNLLQMAFSIFTVVSGNRVLSGDGGYLFDFFGDKMISYLLISGSAAGFGLTVELRRGEPSNSFTDKAHASASLLLIGFLFTAIASTFTSFALPKKPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4M1</accession>
    <name>V7B4M1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ATP-dependent helicase BRM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G061000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7B4M1"/>
    <dbReference type="Gramene" id="ESW11808">
        <property type="protein sequence ID" value="ESW11808"/>
        <property type="gene ID" value="PHAVU_008G061000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0386">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PAKMQYI"/>
    <dbReference type="OrthoDB" id="6017at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10810:FF:000017">
        <property type="entry name" value="ATP-dependent helicase BRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000762">
        <property type="entry name" value="ATP-dependent helicase BRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.920.10:FF:000038">
        <property type="entry name" value="Brahma1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014978">
        <property type="entry name" value="Gln-Leu-Gln_QLQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10799">
        <property type="entry name" value="SNF2/RAD54 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08880">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00951">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51666">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="QLQ" evidence="8">
        <location>
            <begin position="471"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="988"/>
            <end position="1153"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="1307"/>
            <end position="1484"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="181"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="298"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="442"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="508"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="541"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1579"/>
            <end position="1641"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1741"/>
            <end position="1801"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1818"/>
            <end position="1897"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="2033"/>
            <end position="2190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="13"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="181"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="193"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="298"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="454"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="513"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1601"/>
            <end position="1611"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1768"/>
            <end position="1781"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1782"/>
            <end position="1792"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1818"/>
            <end position="1835"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1850"/>
            <end position="1871"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1875"/>
            <end position="1884"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1888"/>
            <end position="1897"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="2033"/>
            <end position="2044"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="2089"/>
            <end position="2099"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2190" mass="244095" checksum="6C2A31010615A233" modified="2014-02-19" version="1">MQSGGGPGGGPGRNPAGRAASTSSAAASPSSSSSAASHLESLQQQQQQQQQHIGSRQSFQQQLLRKPEGSEAFLAYQAGLQGAFGSNNFPSSSMQLPQQSRKFVDLAQHGSNQGQGVEQQMLNPAQAAYFQYALQASQQKPALAMQSLQQPKMGILGPSSVKDQDMRMGNLKMQDLMSMQAVNQAQASSSRNSSDHFNHGEKRVEQGQQLAPARKSEGNPSSQGSAVGNIVPGNIISPVQALANQQSISNTMNNQIAMSAQLRAMQAWAHEQNIDMSHPANAQLMAQLIPLMQSRMVQQPKANDTNSGAQSSPVPVSNQQVISPAMASESSARANSSGDVSAQSGSVKARQMAPPNHFSPPISAGIAGTSSDMAVQQFSLHSRDTQGSLKQSVLIGNGIHPQKTSANMNIGADHPLNAKASSSCPEPAKMQYIRQLNQSASQAGGLTNEGGSGNCTKSQAGPSQTPQKRNGFTKQQLHVLKAQILAFRRLKKGEGALPQELLRSINPPPLDLQVQQPIHSGGAQNQERSAGNIVAEQPRQNEANAKDSQHIPSISGKSSSKKEGFIRDESNAVTAVHVQAPSPMIKESAGKEEQQSVVCSAKSDQENEHGMNRTSGRNELVLDKGKGVAVPQSSVTETVQLNKSTQASTVAQPKDTLSTRKYHGPLFDFPFFTRKHDSFGSSMLLNNNNNLSLAYDVKELLFEEGMEVLSKRKTENLRKIEGLLAVNLERKRIRPDLSRLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQRALREKQLKSIFQWRKKLLETHWAIRDARTARNRGVAKYHERMLREFSKRKDEDRNKRMEALKNNDVDRYREMLLEQQTSIQGDAAERYAVLSTFLTQTEEYLHKLGSKITTTKNQQEVEEAAKAAAGAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSSVNKYYSLAHAVSEKVVRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYTWLPSVSCIFYAGGKDYRSKLYSQEIMAMKFNVLVTTYEFIMYDRSRLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEVSTQNTEDDWLETEKKVIIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCKMSALQSAIYDWVKSTGTLRLDPEGEESKIQKNPLYQAKEYKTLNNRCMELRKTCNHPCLNYPLVNELSTNLIVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLDILEDYLNLRRFVYRRIDGTTNLDDRESAIMDFNSPDSDSFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYLEAVVDKISSHQKEDELRSGGTVDMEDEFVGKDRYIGSVESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQENVHNVPSLQELNRLIARSDEEVELFDQMDEELDWPEEIMQHDEVPQWLRANTREVNAAIASLSKKPSKNMLGGNIGMDSEVGSERRRGRPKGKKHPNYKELEDENGEYSEASSEERNEYSAQEEGEIGEFEDDVYSGADGHQPEEDGLTSDAGYEIARSNARHNHVAEEAGSSGSSSDCQRLVQTVSPSVSAQKFASLSALDARPSSISKIMGDDLEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRHTMERPEDKSGSEMVSLQRGESSLLADYKYQMQTRTDTETKSLGDNNASKHDKNATSLKNKQKLPSRKVGNTSKLQGSPKSNRLNCTSAPSDDGGEHPREIWEGKPLNSNGSSAHGTKTTEIILRGCKNVISKLQRKIDKEGHQIVPLLTDLWKRIENSGYAGGSGNSLLDLRKIDQRIDRMDYTGVMELVFDVQFMLRGSMHFYGYSFEVRSEARKVHDLFFDILKIAFPDTDFGEARSALSFTSQIPAGTAASPRQVTVGSSKRHRATNDVETDPIPSQKPPSASNGESTRFKGHLKESKTGSGGSSAREQPQQDNPPMLTHPGQLVVCKKKRNDREKSLGKGRSGSACPVSPPGAIKSPGSGSTPKDGRWGSQPSQHSNGSGGSVGWANPVKRLRTDSGKRRPSHM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4X4</accession>
    <name>V7B4X4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G155400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4X4"/>
    <dbReference type="SMR" id="V7B4X4"/>
    <dbReference type="STRING" id="3885.V7B4X4"/>
    <dbReference type="Gramene" id="ESW12952">
        <property type="protein sequence ID" value="ESW12952"/>
        <property type="gene ID" value="PHAVU_008G155400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZTU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FCTRRFG"/>
    <dbReference type="OrthoDB" id="1111059at2759"/>
    <dbReference type="PhylomeDB" id="V7B4X4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012442">
        <property type="entry name" value="DUF1645_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33095:SF23">
        <property type="entry name" value="DUF1645 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33095">
        <property type="entry name" value="OS07G0619500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07816">
        <property type="entry name" value="DUF1645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="248" mass="27699" checksum="9562C17A8BBA45CD" modified="2014-02-19" version="1">MQKEQHKEYLDSMTCPSFNYYSTVQLAVIDNQDHNRTLNDDTSFEFAAFRDEACFDDACFPIFNGKIPSSHGSTIASGRDAGSAILRFPITGEDLCRGGHDPLTAPPSESSSEADELEGVPAETYCVWTPNSPRKCKKSNSTGSSSKKWKLLDLLRRSNSEGKESFLFLTAASEKKRVNERWSIEVGGKQKGNNGLANKKNAAVTAHEALYVKNRELRMIDKKKSFLPYKPDLVGFCTRRFGKTFPSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B567</accession>
    <name>V7B567_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LysM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G163700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B567"/>
    <dbReference type="SMR" id="V7B567"/>
    <dbReference type="STRING" id="3885.V7B567"/>
    <dbReference type="Gramene" id="ESW13052">
        <property type="protein sequence ID" value="ESW13052"/>
        <property type="gene ID" value="PHAVU_008G163700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWAT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHILPCK"/>
    <dbReference type="OrthoDB" id="2107166at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="entry name" value="LysM domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33734:SF35">
        <property type="entry name" value="LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33734">
        <property type="entry name" value="LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="LysM domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754473" description="LysM domain-containing protein" evidence="2">
        <location>
            <begin position="29"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="111"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="177"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="353"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="353"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="433" mass="46041" checksum="D4F78962B97BFE20" modified="2014-02-19" version="1">MTNQHPILHCTFLLFLLYLLLNAAPTSCKFTIEPCSDDNSCNALLGYTLYTDLKVSEVASLFQIDPIGLLTANAIDISYSDVEHRILPSKLFLKIPITCSCADGIRKSVSAHYRTRPSDTLSSIADSVYGGLVSPDQLREANSIADPSVLDVDQNLVVPLPCTCFNGSDNSLPSIYLSYVVKPIDTLAAIAARYFTTLTDLMNVNDMGSAAISDGDILAVPIPACASNFPKYATDFGLLVPNGSYTIAASHCVQCSCGPQNLDLYCIPSSLAVSCSSMQCKRSNLILGNVTVQQMSSGCNVTSCNYDGFVNGNILTTMSSSLEPHCPGPRRFPPLIAPPTSVTRESVVAFPPSLSPSQTPLLSQSPSSQSEGTGLTAPKSSVMPATRSFPGFSPANGPVGRIASASPSLANPIPIWMPSFMLFLIKLMIPVAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6A3</accession>
    <name>V7B6A3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G167600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6A3"/>
    <dbReference type="Gramene" id="ESW13095">
        <property type="protein sequence ID" value="ESW13095"/>
        <property type="gene ID" value="PHAVU_008G167600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1427840at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="116"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="190"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="193"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW13095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="267" mass="30295" checksum="7D077C48D7FF9BD9" modified="2014-02-19" version="1">MLLKIQRWLQQPKVRKLACFVSSIVGLLCYALSSSFNQLFGEWTWWKILLYILFTLCIIIFFLSKFTSTRERPTSPPLEAHSAFLVLIITSMYSFFVDKKLKGKPDVYSLVSNAAFAIMSLGLSTLSPFGFEVDLLYFFSGVLIVQLMKIKLWLVIVGGCFSYSLIRLRSILDPQPLYVRSQDLAAIRIDPRSQSQSKSQVSSGSVSLPDSPHVPVPPQADPTHLGSPLQQDNSPQSRTLIRHTDMTWTHFDTYNLQNLQNRLVRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8T5</accession>
    <name>V7B8T5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G268800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8T5"/>
    <dbReference type="Gramene" id="ESW14292">
        <property type="protein sequence ID" value="ESW14292"/>
        <property type="gene ID" value="PHAVU_008G268800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANHRHYG"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051058">
        <property type="entry name" value="GDSL_Est/Lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648">
        <property type="entry name" value="GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648:SF144">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754609" description="GDSL esterase/lipase" evidence="4">
        <location>
            <begin position="26"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW14292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="362" mass="40135" checksum="096BE28244CCF122" modified="2014-02-19" version="1">MEKKSSVGCLFYLIYGFFIFGSSKAEMVPAVYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFPTHKPTGRFSNGKNAADFVAEKLGLATSPPYLSLTSKANKNSATFMDGVSFASAGAGIFDGSDERYRQSIPLTKQVDYYSIVHEEMTREKGADGLQKHLSKSVFVVVIGSNDLFAYFESSDLRKKSTPHQYVDSMAFSLKLQLQRLYDHGGRKFEIAGVGTLGCCPEFRLKNKTECVVEVNYWSVKYNEALQSMLMEWQSENGGIIYSYFDTYAAINDLIQSPASYGFSEVKGACCGLGELNARAPCLPLSNLCPNRQDHIFFDQFHPTEAASRIFVNRLFDGSSAYASPINMRQLVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB59</accession>
    <name>V7BB59_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G215800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB59"/>
    <dbReference type="SMR" id="V7BB59"/>
    <dbReference type="STRING" id="3885.V7BB59"/>
    <dbReference type="Gramene" id="ESW13671">
        <property type="protein sequence ID" value="ESW13671"/>
        <property type="gene ID" value="PHAVU_008G215800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1716">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYQWVKE"/>
    <dbReference type="OrthoDB" id="165342at2759"/>
    <dbReference type="PhylomeDB" id="V7BB59"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033549">
        <property type="term" value="F:MAP kinase phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18534">
        <property type="entry name" value="DSP_plant_IBR5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.190.10:FF:000079">
        <property type="entry name" value="Protein-tyrosine-phosphatase IBR5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="entry name" value="Protein tyrosine phosphatase superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000340">
        <property type="entry name" value="Dual-sp_phosphatase_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044212">
        <property type="entry name" value="IBR5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016130">
        <property type="entry name" value="Tyr_Pase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000387">
        <property type="entry name" value="Tyr_Pase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020422">
        <property type="entry name" value="TYR_PHOSPHATASE_DUAL_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47244">
        <property type="entry name" value="PROTEIN-TYROSINE-PHOSPHATASE IBR5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47244:SF1">
        <property type="entry name" value="PROTEIN-TYROSINE-PHOSPHATASE IBR5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00782">
        <property type="entry name" value="DSPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00195">
        <property type="entry name" value="DSPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="(Phosphotyrosine protein) phosphatases II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00383">
        <property type="entry name" value="TYR_PHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50056">
        <property type="entry name" value="TYR_PHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50054">
        <property type="entry name" value="TYR_PHOSPHATASE_DUAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyrosine-protein phosphatase" evidence="4">
        <location>
            <begin position="46"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosine specific protein phosphatases" evidence="5">
        <location>
            <begin position="103"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="252"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="255"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="30315" checksum="51F46EE0EA9F3A80" modified="2014-02-19" version="1">MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFIYHCLPDDKTLPFDEAIQFLESCEKDKERVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRLSVELTQGVYQQLQEYEQKIYGPMDSGSSLLPNFSPTVLPSISFGFPKIHDPAQPPSFSTAGTPSIFARPTLEVSPTEFTFGAGPMQKNVAGSPFNANQTNPNGTDIQMDGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBR3</accession>
    <name>V7BBR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mediator of RNA polymerase II transcription subunit 21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G037700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the Mediator complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the Mediator complex subunit 21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBR3"/>
    <dbReference type="SMR" id="V7BBR3"/>
    <dbReference type="STRING" id="3885.V7BBR3"/>
    <dbReference type="Gramene" id="ESW15025">
        <property type="protein sequence ID" value="ESW15025"/>
        <property type="gene ID" value="PHAVU_007G037700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1510">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TDNCINF"/>
    <dbReference type="OrthoDB" id="2018967at2759"/>
    <dbReference type="PhylomeDB" id="V7BBR3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016592">
        <property type="term" value="C:mediator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.10">
        <property type="entry name" value="Mediator complex, subunit Med21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037212">
        <property type="entry name" value="Med7/Med21-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021384">
        <property type="entry name" value="Mediator_Med21"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13381:SF0">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13381">
        <property type="entry name" value="RNA POLYMERASE II HOLOENZYME COMPONENT SRB7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11221">
        <property type="entry name" value="Med21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140718">
        <property type="entry name" value="Mediator hinge subcomplex-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0010">Activator</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="28"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="91"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU366036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="139" mass="15404" checksum="81C1649B01CCF288" modified="2014-02-19" version="1">MDIISQLQEQVNLIAHLAFNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGTNFSEQPKLMSSTLVKAAKQFDALVAALPISESGEEAQLKRIRELQAENDAIGQELQKQLEAAEKELNQVQELFSQASDNCLNLKKPDDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC47</accession>
    <name>V7BC47_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Uridine kinase</fullName>
            <ecNumber evidence="12">2.7.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G281900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>cytidine + ATP = CMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17562"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.48"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>uridine + ATP = UMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16825"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.48"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Pyrimidine metabolism; CTP biosynthesis via salvage pathway; CTP from cytidine: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Pyrimidine metabolism; UMP biosynthesis via salvage pathway; UMP from uridine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the uridine kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the UPRTase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the uridine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.48" evidence="12"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC47"/>
    <dbReference type="SMR" id="V7BC47"/>
    <dbReference type="STRING" id="3885.V7BC47"/>
    <dbReference type="Gramene" id="ESW14448">
        <property type="protein sequence ID" value="ESW14448"/>
        <property type="gene ID" value="PHAVU_008G281900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4203">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRVQDYN"/>
    <dbReference type="OrthoDB" id="106623at2759"/>
    <dbReference type="UniPathway" id="UPA00574">
        <property type="reaction ID" value="UER00637"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00579">
        <property type="reaction ID" value="UER00640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043771">
        <property type="term" value="F:cytidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004849">
        <property type="term" value="F:uridine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044211">
        <property type="term" value="P:CTP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000904">
        <property type="term" value="P:regulation of starch metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044206">
        <property type="term" value="P:UMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02023">
        <property type="entry name" value="UMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2020:FF:000015">
        <property type="entry name" value="Uridine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000339">
        <property type="entry name" value="Uridine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRTase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000764">
        <property type="entry name" value="Uridine_kinase-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001097">
        <property type="entry name" value="PRK00129.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004018">
        <property type="entry name" value="PRK05480.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00235">
        <property type="entry name" value="udk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10285">
        <property type="entry name" value="URIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14681">
        <property type="entry name" value="UPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00988">
        <property type="entry name" value="URIDINKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="PRTase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="9 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="8 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphoribulokinase/uridine kinase" evidence="13">
        <location>
            <begin position="49"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphoribosyltransferase" evidence="14">
        <location>
            <begin position="265"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF14681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW14448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="477" mass="53580" checksum="4B0A4AC735C93EA4" modified="2014-02-19" version="1">MGTNSAVDLMEFSSEVHFSGVYMNDIEQRNAGTEQPTTSATDMNKQPFVIGVAGGAASGKTSVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELIRVQDYNFDHPEAFDTEHLLRVMDKLKCGQAVDIPKYDFKGCKSGVFPARRVNLADVIILEGILVFHDPRVRALMNMKIFVDTDADIRLARRIKRDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGRDNHVAIDLIVQHIRTKLGQHDLCKIHPNLYVIQSTFQIRGMHTLIRDSQTTKHDFIFYSDRLIRLVVEHGLGHLPFTEKQVFTPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPKDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPESNIIFLNLISAPQGVHEVCKSFPRIKIVTSDIDIGLNEDFRVIPGMGEFGDRYFGTDDDQQEVLPSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCK4</accession>
    <name>V7BCK4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G061200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCK4"/>
    <dbReference type="STRING" id="3885.V7BCK4"/>
    <dbReference type="Gramene" id="ESW15300">
        <property type="protein sequence ID" value="ESW15300"/>
        <property type="gene ID" value="PHAVU_007G061200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRXH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1918928at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010305">
        <property type="term" value="P:leaf vascular tissue pattern formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010087">
        <property type="term" value="P:phloem or xylem histogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013666">
        <property type="entry name" value="PH_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040269">
        <property type="entry name" value="VAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008546">
        <property type="entry name" value="VAN3-bd-like_auxin_canal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31351:SF4">
        <property type="entry name" value="AUXIN CANALIZATION PROTEIN (DUF828)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31351">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05703">
        <property type="entry name" value="Auxin_canalis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08458">
        <property type="entry name" value="PH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VAN3-binding protein-like auxin canalisation" evidence="2">
        <location>
            <begin position="22"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="Pleckstrin-like plant" evidence="3">
        <location>
            <begin position="364"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="101"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="101"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="478" mass="51149" checksum="126E0A9397D19B0C" modified="2014-02-19" version="1">MDKAQTEPWRPDPLHGGMFRPPETPREPMEFLSRSWSVSALEVSKALSPALSRVTLTNSGAADTIPEDLAGESEEGAAMVSGNPFSFASSETSQMVMERIMSQSQEVSPRTSGRLSHSSGPLNGTQSCGSLTDSPPVSPSEIDDIKFTRNNNITSSLTLNFRTTTPAAAGKTVGRWLKDRKEKKKEETRAHNAQLHAAVSVAGVAAAVAAIAAATAASSGAGKDEQIAKTDMAVASAATLVAAQCVEVAEALGAEREHLASVVSSAVNVRSAGDITTLTAGAATALRGAATLKARALKEVWNIAAVIPVEKNLGAGGMSNNNLDNNNINNSSNGNSNGSFSGELVPEENFLGTCSRELLARGVELLKRTRKGDLHWKVVSVYINRMNQVILKMKSRHVAGTITKKKKNVVLEVIKDVSAWPGRHLLEGGEDRRYFGLKTVMRGTVEFECKDQREYDVWTRGVSRLLSIAAEKNNRNRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCW6</accession>
    <name>V7BCW6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G090200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCW6"/>
    <dbReference type="Gramene" id="ESW15649">
        <property type="protein sequence ID" value="ESW15649"/>
        <property type="gene ID" value="PHAVU_007G090200g"/>
    </dbReference>
    <dbReference type="OMA" id="KNRYGMV"/>
    <dbReference type="OrthoDB" id="1917400at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34666:SF7">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34666">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="153" mass="17299" checksum="AB724E1ACC337346" modified="2014-02-19" version="1">MDTEALSFSKMCDTCVYSSDSPPTSPKASSNQVLREGSKVDEEEGFEAKLVSEGHRKSFSFVESGKKMKRVDDDEEIPMDLLWEVLNEELSSATKFGSCSSREMVEFRCATVAKTSTALVQTKNRYGMVLMIKVFKKFFSLNNSQIKLFWQSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDD0</accession>
    <name>V7BDD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G027700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDD0"/>
    <dbReference type="STRING" id="3885.V7BDD0"/>
    <dbReference type="Gramene" id="ESW14908">
        <property type="protein sequence ID" value="ESW14908"/>
        <property type="gene ID" value="PHAVU_007G027700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUI4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PYHHYLY"/>
    <dbReference type="OrthoDB" id="1721933at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048653">
        <property type="term" value="P:anther development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048440">
        <property type="term" value="P:carpel development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:002425">
        <property type="entry name" value="Zinc finger protein STAMENLESS 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045320">
        <property type="entry name" value="JAGGED/SL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45730">
        <property type="entry name" value="ZINC FINGER PROTEIN JAGGED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45730:SF32">
        <property type="entry name" value="ZINC FINGER PROTEIN JAGGED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="5" id="KW-0221">Differentiation</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="74"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="15"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="38"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW14908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="277" mass="29795" checksum="7DC94DD4B4F405E2" modified="2014-02-19" version="1">MFLNPFLIPSVISQVSTKPDEARRPEGNPLDLNNLPDEYSRDGKQVLEDHTSSTGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHSLAAQAPPHLGCCQPIGSGGYHPTGDPTAPLRFPRYFSGSSSTHMPPAAPAPVAPQPYLYTSPTRPVSFGSSHFPHQHAVNDYYVGHVMSGSHGHYVGGGGGGGESTSSYTCIGAPVGQGGGAPAVKDGSLHNNQEEGLSWGRGYRLDPPSAINRFQDGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEG5</accession>
    <name>V7BEG5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Polycomb protein VEFS-Box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G1379000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VEFS (VRN2-EMF2-FIS2-SU(Z)12) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEG5"/>
    <dbReference type="STRING" id="3885.V7BEG5"/>
    <dbReference type="Gramene" id="ESW16214">
        <property type="protein sequence ID" value="ESW16214"/>
        <property type="gene ID" value="PHAVU_007G1379000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1429006at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019135">
        <property type="entry name" value="Polycomb_protein_VEFS-Box"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09733">
        <property type="entry name" value="VEFS-Box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Polycomb protein VEFS-Box" evidence="8">
        <location>
            <begin position="309"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="332"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="332"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="342"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF09733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="351" mass="38358" checksum="4AC85BA1AC2B02A3" modified="2014-02-19" version="1" fragment="single">MGSILPNQNDGIHTTLEVDQNDEIHTTLEVDHEQVSNTILHRCQGCVPLISVQDGTNGVLEVSREEVSNAIILHTGRDCVPSTSNQDGTRGVLEVNDEEVSNAIVLHTNQDCVPSISHQDGTCGVLEVNHEEISNAIVLHTSQKCLPPISNQDGTCGVLEVNHEEVSNAIVLHTGQDCVPPISHQDGTCGVLEVDHEKDKVSNAIVLHTNQDCVPVISDHDNRVHVGLEEGVSNATIVHTDKDCVPPIFDHDNGTRAALEDDVSNAIILHPGLDSSSSIAMEEGGTSSMPQVEEKEKSLIELFDPNLIARWKKRTFYHSHTYQAMALEEVVKDEDSEDEINEGAREIEDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGN3</accession>
    <name>V7BGN3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GB1/RHD3-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G176200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGN3"/>
    <dbReference type="SMR" id="V7BGN3"/>
    <dbReference type="Gramene" id="ESW16675">
        <property type="protein sequence ID" value="ESW16675"/>
        <property type="gene ID" value="PHAVU_007G176200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2037">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DRQSGFR"/>
    <dbReference type="OrthoDB" id="7788754at2759"/>
    <dbReference type="PhylomeDB" id="V7BGN3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005635">
        <property type="term" value="C:nuclear envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01851">
        <property type="entry name" value="GBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1000.10:FF:000002">
        <property type="entry name" value="Guanylate-binding family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001063">
        <property type="entry name" value="Guanylate-binding family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1000.10">
        <property type="entry name" value="Guanylate-binding protein, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030386">
        <property type="entry name" value="G_GB1_RHD3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003191">
        <property type="entry name" value="Guanylate-bd/ATL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036543">
        <property type="entry name" value="Guanylate-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015894">
        <property type="entry name" value="Guanylate-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10751">
        <property type="entry name" value="GUANYLATE BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02263">
        <property type="entry name" value="GBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02841">
        <property type="entry name" value="GBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48340">
        <property type="entry name" value="Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51715">
        <property type="entry name" value="G_GB1_RHD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754527" description="GB1/RHD3-type G domain-containing protein" evidence="6">
        <location>
            <begin position="25"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="558"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="domain" description="GB1/RHD3-type G" evidence="7">
        <location>
            <begin position="58"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW16675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="603" mass="69150" checksum="551E805E6BAC33F8" modified="2014-02-19" version="1">MDSPFPFPLLLLLFLCLSPIPSFSIDNFHQAFPIVEPDPGHTKLRLSREGLEAIERITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPIDLDINGVRTSVFYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRRVPNADGNKNIDVVNQIRDSLAVMGDNSTAFSLPQPHLQRTKLCDMKDVELDQLYIKRREQLKELVASIISPKIVQGKTLTGKEFVSFLKQILEALNKGEIPSTGSLVEVFNKNILEKCLKLYSEKMATIVLPLTEESLQGTHDRTKDEVMQVFDQQHFGRHHAKKSVMQLDEELQQVYKNVVLQNELQSSKLCEGLYTRCEDKMDQLQVLKLPSLAKFNAGFLLCNQSFEHECVGPSKPNYEQRMMKMLGKSRSLFIKEYNHRLFNWLVAFSLVMVVIGRFFIKFILIEIGAWALFIFLETYTRMFWSAEALYYNPVWHFIVATWETVVYSPVLDLDRWAIPLGALLSLFILYWRCYGKRKYGSQWLLPLYRSNKNGSNRPRTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGR6</accession>
    <name>V7BGR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G128200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGR6"/>
    <dbReference type="SMR" id="V7BGR6"/>
    <dbReference type="Gramene" id="ESW16088">
        <property type="protein sequence ID" value="ESW16088"/>
        <property type="gene ID" value="PHAVU_007G128200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TTCECAV"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000187">
        <property type="entry name" value="E3 ubiquitin-protein ligase ATL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044600">
        <property type="entry name" value="ATL1/ATL16-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913:SF1">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="40"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="16">
        <location>
            <begin position="126"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW16088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="353" mass="39652" checksum="3BF0CEE11CD97D43" modified="2014-02-19" version="1">MDLASRRHLIYESQSQALSPVTSPGGSFFHPHQHSSSTSFPIIAIAIIGIMATAFLLVSYYIFVIKCCLNWHRIDILRRFSPSRRREDPSPMYSPGTETRGLDEAMIRLIPVIQYKTQGDGDSGECAVCLNEFQEDEKLRIIPNCSHVFHIDCIDVWLQSNANCPLCRTSISLTSRFHMEQLLALRSSSPPHQTPPRENLIGGDEDFVVIELGNIHDRNQNLQERGNGLELPLPTSHISSSTPRKLEHGNVQKKAMKLHKVTSMGDECIDIRAKDNQFSVQPIRRSFSMDSSGDRQFYLAVQEALRLQNRQVNEVSSTEGCSGSGNIRVKRSFFSFGHGSRSRSSVQPVSLEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHC4</accession>
    <name>V7BHC4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G109000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHC4"/>
    <dbReference type="SMR" id="V7BHC4"/>
    <dbReference type="STRING" id="3885.V7BHC4"/>
    <dbReference type="Gramene" id="ESW15866">
        <property type="protein sequence ID" value="ESW15866"/>
        <property type="gene ID" value="PHAVU_007G109000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LFICGSN"/>
    <dbReference type="OrthoDB" id="1904546at2759"/>
    <dbReference type="PhylomeDB" id="V7BHC4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05489">
        <property type="entry name" value="xylanase_inhibitor_I_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000041">
        <property type="entry name" value="Basic 7S globulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000045">
        <property type="entry name" value="Basic 7S globulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033868">
        <property type="entry name" value="Xylanase_inhibitor_I-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965">
        <property type="entry name" value="ASPARTYL PROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965:SF103">
        <property type="entry name" value="EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756717" description="Peptidase A1 domain-containing protein" evidence="5">
        <location>
            <begin position="23"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="6">
        <location>
            <begin position="46"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="46094" checksum="CB69481233C679DA" modified="2014-02-19" version="1">MAASAKLLLLSFLTLFISPSIAQTSFRPKALVLPVTKDVSASAPQYVTRIKQRTPLVPVKLTVDLGGGYFWVNCEKGYVSSTSKPAHCGSAQCSLFGSNGCSGEKICGRSPSNTVTGVSTYGDIHADVVATNSTDGNNPVRVVSVPKFLFICGSNVVQKGLASGVRGMAGLGRTKVSFPSQFASAFSFPRKFAICLSSSTMTDGVMFFGDGPYNFGYLNADISKVLTFTPLITNPVSTAPSAFLGEPSVEYFIGVKSIRISDKNVALNKTLLSIDRNGVGGTKISTVNPYTVMETSIYKAVSEAFVKAVGAATVAPVAPFGTCFANQDIGSTRMGPAVPTINLVLQNEQVVWSIIGANSMVRFDDVICLGFVDAGSGPSTAHVGFVAGGSHPMTSITIGAQQLENNFLQFDLATSRLGFSSLFLEHTNCANFNFTSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJD5</accession>
    <name>V7BJD5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Nucleobase-ascorbate transporter 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G012700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJD5"/>
    <dbReference type="SMR" id="V7BJD5"/>
    <dbReference type="STRING" id="3885.V7BJD5"/>
    <dbReference type="Gramene" id="ESW18097">
        <property type="protein sequence ID" value="ESW18097"/>
        <property type="gene ID" value="PHAVU_006G012700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1292">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMEHIGD"/>
    <dbReference type="OrthoDB" id="1641903at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11119">
        <property type="entry name" value="XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="152"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="356"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="384"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="415"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="453"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="520" mass="57248" checksum="13C31FB2B2E9E24D" modified="2014-02-19" version="1">MADITHPPMEQLQDLEYCIDSNPPWVETILLAFQNYILMLGTSVMIPSMLVPAMGGSSGDKAQVIQTLLFVAGINTLLQALFGTRLPAVVGGSFAYVIPIAYIISDSSLQRINDPHERFLHTMRAIQGALIVASSIQIVLGYSQIWGLFSRFFSPLGMAPVVGLVGLGFIQRGFPALGNCVEIGIPMLLLIVGLSQYLKHVRLYRDIPIFERFPVLICVTIVWIYSIILTASGAYRYKPTITQNSCRTDRANLIFTAPWFMFPYPLQWGPPTFSAGHSFAMMSAVIVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLYGTGTGSTVSVENVGLLGLTRVGSRRIVQISAGFMIFFSTLGKFGAVFASIPFPIFAAIYCVVFGLVAAVGISFLQFTNMNSMRNLIITGLTLFLGISVPQFFNQYWTSSHHGPVHTNAGWFNAFLNTIFSSPATVGLIVAVFLDNTLEVERSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMA3</accession>
    <name>V7BMA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G261500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMA3"/>
    <dbReference type="STRING" id="3885.V7BMA3"/>
    <dbReference type="Gramene" id="ESW17701">
        <property type="protein sequence ID" value="ESW17701"/>
        <property type="gene ID" value="PHAVU_007G261500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R1BM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TMVHGST"/>
    <dbReference type="OrthoDB" id="9442240at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009739">
        <property type="term" value="P:response to gibberellin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010090">
        <property type="term" value="P:trichome morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044291">
        <property type="entry name" value="GIS/GIS2/ZFP8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46547">
        <property type="entry name" value="ZINC FINGER PROTEIN GIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46547:SF7">
        <property type="entry name" value="ZINC FINGER PROTEIN GIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="60"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="67"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="273" mass="30352" checksum="FBAA325E2CB5E3A4" modified="2014-02-19" version="1">MDKTTTSTTTTSSHRQLHDFMNVDSFSQLPFIRPAPLAKDKSPIRLFGIDFAGGNNTLLSPDHSDSAETTNTNNNINSFELDANKDDTTTTTVTVTDTNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSAPTPPMPYPTWNNAAAAANTRFYGTTPFSHSHQPHQQQPINGNPLALWRIPSNNPSFSHERSALFASEEISHVRGSQVVGGSGSQNRYVYDSKRGSVQEHVSLDLHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMS6</accession>
    <name>V7BMS6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G032600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the mTERF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMS6"/>
    <dbReference type="Gramene" id="ESW18338">
        <property type="protein sequence ID" value="ESW18338"/>
        <property type="gene ID" value="PHAVU_006G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHEAFRM"/>
    <dbReference type="OrthoDB" id="637682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.70.10:FF:000001">
        <property type="entry name" value="Mitochondrial transcription termination factor-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.70.10">
        <property type="entry name" value="Transcription termination factor 3, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003690">
        <property type="entry name" value="MTERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038538">
        <property type="entry name" value="MTERF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068">
        <property type="entry name" value="CGI-12 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068:SF133">
        <property type="entry name" value="MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02536">
        <property type="entry name" value="mTERF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00733">
        <property type="entry name" value="Mterf"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW18338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="393" mass="45010" checksum="8830183DF87BD3D6" modified="2014-02-19" version="1">MVPRILITTLSASFTHHTTTQFQLGSLLLHKHNAFLFMFKTFTSDPNSLKGVTFTVSYLINSFGLSLELARELSKRVKLKTPDGPNAVIDTLKNYGFSKALVAKLVEKNPRLLVAKAETTLLPKLKFFHSIGVSNTDMHKIMLESPRILERSLGKILVPRYEIIRSIVGDDRKVVKVLTRAPFSFTVSDLRKCLVPNIEVLRQSGVPQGSISLLVVNFPRATMWKHSRFVEVVERIKKFGFDPKRTSFVMAIQVLITMHKGAWESRFEIYERWGWNRVIFLQAFLKYPNFVKLSDETVTEKMNFLVNDMGLSSLEIAAFPPILAYNLEKRIIPRFSVIKILKSKGLLRSSLSFSYYICMTDNSFLKKFVISFQKDLPLLPDVYKGLIHHDDVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ97</accession>
    <name>V7BQ97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G068000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ97"/>
    <dbReference type="SMR" id="V7BQ97"/>
    <dbReference type="STRING" id="3885.V7BQ97"/>
    <dbReference type="Gramene" id="ESW18761">
        <property type="protein sequence ID" value="ESW18761"/>
        <property type="gene ID" value="PHAVU_006G068000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2265">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RDVECSL"/>
    <dbReference type="OrthoDB" id="515366at2759"/>
    <dbReference type="PhylomeDB" id="V7BQ97"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd06467">
        <property type="entry name" value="p23_NUDC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.740:FF:000002">
        <property type="entry name" value="NudC domain-containing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.790:FF:000051">
        <property type="entry name" value="nudC domain-containing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.740">
        <property type="entry name" value="Single helix bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007052">
        <property type="entry name" value="CS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037898">
        <property type="entry name" value="NudC_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12356">
        <property type="entry name" value="NUCLEAR MOVEMENT PROTEIN NUDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12356:SF18">
        <property type="entry name" value="NUDC DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04969">
        <property type="entry name" value="CS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51203">
        <property type="entry name" value="CS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CS" evidence="1">
        <location>
            <begin position="16"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="158" mass="18328" checksum="48CD1B797E9AE08F" modified="2014-02-19" version="1">MAEKLAPEKRHNFIHNGEKVFEWDQTLDEVNIYINLPPNVHSKQFYCKIQSKHLELGIKGNPPYLNHDLTCPVKTDSSFWTLEDDIMHITMQKRDKGQTWASPILGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT48</accession>
    <name>V7BT48_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transcription factor CBF/NF-Y/archaeal histone domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G152500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NFYC/HAP5 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT48"/>
    <dbReference type="SMR" id="V7BT48"/>
    <dbReference type="STRING" id="3885.V7BT48"/>
    <dbReference type="Gramene" id="ESW19751">
        <property type="protein sequence ID" value="ESW19751"/>
        <property type="gene ID" value="PHAVU_006G152500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1657">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WANAEDH"/>
    <dbReference type="OrthoDB" id="1428965at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22908">
        <property type="entry name" value="HFD_NFYC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000062">
        <property type="entry name" value="Nuclear transcription factor Y subunit C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003958">
        <property type="entry name" value="CBFA_NFYB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050568">
        <property type="entry name" value="Transcr_DNA_Rep_Reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10252">
        <property type="entry name" value="HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10252:SF8">
        <property type="entry name" value="NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00808">
        <property type="entry name" value="CBFD_NFYB_HMF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Transcription factor CBF/NF-Y/archaeal histone" evidence="10">
        <location>
            <begin position="86"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="180"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="192"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00059992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW19751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="240" mass="26333" checksum="1581E90DABCBE2AA" modified="2014-02-19" version="1">MDQNRNGEPGRGIGSAPAQEAHNKNQYESNPVMSPTTNPPVQTVGPSVPLNRQQQQQEQLQEKVKNFWAQQLKRIEEGTDLRSRPSMPLSRIKKIMKSDPDVKLVSAETPVLFSKACELFIMELTMKAWANAENNSRGKIQKTDIASAIAGTEVFDFLDDIVPIPKNDTNTMMHQMLAGNAPPPTDHVPPQQVASPPFQSAASATLHQVPHALQTYPLIPTSTVPPNQQDPSPDSDDGTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTG4</accession>
    <name>V7BTG4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Oligopeptide transporter 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G200100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTG4"/>
    <dbReference type="Gramene" id="ESW20328">
        <property type="protein sequence ID" value="ESW20328"/>
        <property type="gene ID" value="PHAVU_006G200100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2262">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPDIHAQ"/>
    <dbReference type="OrthoDB" id="9986677at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035673">
        <property type="term" value="F:oligopeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004648">
        <property type="entry name" value="Oligpept_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004813">
        <property type="entry name" value="OPT"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00727">
        <property type="entry name" value="ISP4_OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00728">
        <property type="entry name" value="OPT_sfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22601">
        <property type="entry name" value="ISP4 LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03169">
        <property type="entry name" value="OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0571">Peptide transport</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="212"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="359"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="415"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="442"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="527"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="599"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="648"/>
            <end position="665"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="677"/>
            <end position="698"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW20328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="734" mass="82743" checksum="C9E2E489590D599B" modified="2014-02-19" version="1">MWFDTENPNTSEVDEDEVSPIEEVRLTVSNSDDPTQPIWTFRVWFLGLLFCCLLSFINQSFAYRTEPLIMVQTSIQVAVLPVAHFMAVVLPKTKFTIPGFGPRSFSFNPGPFNVKEHVLITMFANAGSAFGSGSPYAVGIVNIIKAFYGRGISFFASWLLIVTTQVLGYGWAGLLRKYVVEPPHMWWPGSLVQASVFRAMHETDNNRARTKFFFYALLCSMAWYVIPGYLFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGALTLDWVAVTSFLFSPLISPFFAIVNIFVGYTLIVYVVTPIAYWGLNVYNAKRFPIFSSHLFTVQGQRYNIPAIVDDHFKLNVAEYEKQGRIHLSVFFALSYGFGFATIASTLTHVFCFYGREIMERYRASFNVTEDIHTKLMKRYKDIPSWWFYLLLVVTLVVSLALCIFLKDQVQMPWWGLLFAVALAFGFTLPVSIITATTNQTPGLNVIAEYVFGLIYPGRPIANVCFKTYGYISMAQSVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPADSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYSAMNWFFLGGALGPVIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNAWILVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMTVLLYFTLGLENRSLNWWGNDGEHCPLAACPTAKGVIVDGCPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTY4</accession>
    <name>V7BTY4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G069300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTY4"/>
    <dbReference type="STRING" id="3885.V7BTY4"/>
    <dbReference type="Gramene" id="ESW21419">
        <property type="protein sequence ID" value="ESW21419"/>
        <property type="gene ID" value="PHAVU_005G069300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVD1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRFDASE"/>
    <dbReference type="OrthoDB" id="1934890at2759"/>
    <dbReference type="PhylomeDB" id="V7BTY4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010207">
        <property type="term" value="P:photosystem II assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33448:SF4">
        <property type="entry name" value="CHLOROPLAST PROTEIN HCF243"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33448">
        <property type="entry name" value="CHLOROPLAST PROTEIN HCF243-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="330"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="597"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="111"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="135"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="337"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="363"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="382"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="401"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="443"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="484"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="499"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="509"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="535"/>
            <end position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="714" mass="79365" checksum="1C2AA8BE198E1EC8" modified="2014-02-19" version="1">METDRERPHRSTSSNSSSTSELFVCFTSRLSSSSMKLSSKSILSPSRSRDPPQISLSSSLSRRLKSNGSMKGGQASPMFPTAGKRRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKIRARSKRRGEASFRKAEQGGANANGNANPNADLTRQNSQGFQHHQNCLKHRNQRWVHLPLTICEALREFSCFFPCRSSCMSSEKKDKGGGMEGGGLVREGSCGNGLGRWLVALQDGDGKGRGIELVMEKEMEDERERGERSHSQRRHVFEDVDVDLVVGEEEEKKSQDVVGEEEEKARVSICIPPKNALLLMRCRSDPVKMAALANRFWESPVHKNKCQEEEKEGEEHDDDSGDEDEQEVEDDDDKEQPIKVKEDDQQLQEEEVEGETKEDTICERGTETMVVVCKEEEQAGKESYEIENGENLESNEFHEVKEEEEKDDLEANENAIDKGETLTHPEAHSDLDNLKTEEKEVNLQEGKEEVRENNESSELSSTSETFTASEPENDDAEPETEAVTTETSEVSTEEEEEKLTPESETQDPTRDPNSDPESKERENGSKCEDRGRETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPVPAGGGKRLTGETYTKSKPKPKPSPSLMQPPRSSCSFPAVGGAAGVSMATMIEQKLMGSKSGNGYEPFVLTRCKSEPMRSSAKLAPEACFWNNRKLEPHPPAAQLGVGAPAGVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUD3</accession>
    <name>V7BUD3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G003000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUD3"/>
    <dbReference type="STRING" id="3885.V7BUD3"/>
    <dbReference type="Gramene" id="ESW20633">
        <property type="protein sequence ID" value="ESW20633"/>
        <property type="gene ID" value="PHAVU_005G003000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSMU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VENLMWE"/>
    <dbReference type="OrthoDB" id="18975at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36337">
        <property type="entry name" value="OBSCURIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36337:SF1">
        <property type="entry name" value="OBSCURIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW20633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="810" mass="89894" checksum="83B80948587241D4" modified="2014-02-19" version="1">MSSQTHKLFLEKWLTICSATTATATSAAKTTARAIVQAWTTLRDSLQSPSTEDPQQLHQTLQTLVNSQSSLHVAEPQAKLLLTLLQSPTSRRSFPLLLTLLYVWVRKSHNLNPTIVDSVLRILSSTPSDDAIFPQSLLLLGAFSSSPSISEKTKTLCLEMMVGLLVGVNKSKLFVEMPRVLAGIGYALSSSVTVHSVEMLGFLFRIWGKGEGCVAHGLMVLYLFDWVVENLIGFGYSDKMGVLIREGFGRFKEEHASFAVFMAAVGVIRALERRGVGAGLVSGMGVKDCVVGRIEGLVSDLVSRRLRFGYGDDNEGDGVEEDRLLLRCVSLGLARTVAFSGHSSLFVCLALALLSEIFPLPRLYQSVFEKSGESGGVELKEIREHLDGVLFKEAGAVTGVLCSHYALADEESKNVVENLMWEYCGDVYSGHMRLAVMLKGEKDVLLEGLEKIAESAFLMVVVFALAVTKHKLNSSFSQEIQMDVSLKILVSFSCMEYFRHVRLPEYLETIRKVVAGVKNEHACTSFVNSMPSYSDLTNIPDQKTNYLWSKNEVQTARILFCLRVIPTFVECLPSLVFRNIVAPIMFLYMEHPNDKVARASHSVFMTFMTMGKDSEENDKASLKELLVFHYMQRSLVGYPGITPFEGMASGVVGMVQHLPAGSPAIFYCIHSLVEKANKLCSEVFTHEADAWKKWQGEPEPSKKLMDLLLRLLFLVDIQVLSDLMKLLAQLITKLPRDAQNIVLNELYSQVADSDDVVRKPILVSWLQSLSYLCTKATDQNATYRKSTSEDSLTLASIADPLNSRRTNARL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVD2</accession>
    <name>V7BVD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 13">Aconitate hydratase</fullName>
            <shortName evidence="13">Aconitase</shortName>
            <ecNumber evidence="5 13">4.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_005G115100g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13">Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 13">
            <text>citrate = D-threo-isocitrate</text>
            <dbReference type="Rhea" id="RHEA:10336"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="EC" id="4.2.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate metabolism; glyoxylate and dicarboxylate metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the aconitase/IPM isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.3" evidence="5 13"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVD2"/>
    <dbReference type="SMR" id="V7BVD2"/>
    <dbReference type="STRING" id="3885.V7BVD2"/>
    <dbReference type="Gramene" id="ESW21967">
        <property type="protein sequence ID" value="ESW21967"/>
        <property type="gene ID" value="PHAVU_005G115100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0452">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FNTYVAR"/>
    <dbReference type="OrthoDB" id="2224430at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003994">
        <property type="term" value="F:aconitate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006101">
        <property type="term" value="P:citrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006097">
        <property type="term" value="P:glyoxylate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006102">
        <property type="term" value="P:isocitrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01586">
        <property type="entry name" value="AcnA_IRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01580">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.19.10:FF:000001">
        <property type="entry name" value="Aconitate hydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.499.10:FF:000002">
        <property type="entry name" value="Aconitate hydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.499.10:FF:000005">
        <property type="entry name" value="cytoplasmic aconitate hydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="entry name" value="Aconitase, domain 3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="entry name" value="Aconitase, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044137">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006249">
        <property type="entry name" value="Aconitase/IRP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01341">
        <property type="entry name" value="aconitase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006757">
        <property type="entry name" value="PRK09277.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF009520">
        <property type="entry name" value="PRK12881.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11670">
        <property type="entry name" value="ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="Aconitase iron-sulfur domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52016">
        <property type="entry name" value="LeuD/IlvD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0329">Glyoxylate bypass</keyword>
    <keyword evidence="9 13" id="KW-0408">Iron</keyword>
    <keyword evidence="10 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="11 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase/3-isopropylmalate dehydratase large subunit alpha/beta/alpha" evidence="14">
        <location>
            <begin position="150"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase A/isopropylmalate dehydratase small subunit swivel" evidence="15">
        <location>
            <begin position="782"/>
            <end position="909"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU361275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW21967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="983" mass="107096" checksum="953314080DECDA03" modified="2014-02-19" version="1">MASAASSLLRASRSKLASSTSSTVSRAFSRSIPGRSSGSSSAARSFGSAVPRWSHGVDWRSPLGLRHQIRAVAPLIERFHRRIATSALDNPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENSSVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNQERFAFLKWGSNAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRQNKLFIDYNEPQPDRVYSSYLELNLDEVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAIPKDVQGKVAKFDFHGQPAEIKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLKVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNEQGFNIVGFGCTTCIGNSGELDQSVASAISENDIVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNIFLRDVWPSTQEIADAVQSSVLPDMFRSTYEAITKGNTMWNQLQVPAETLYSWDPKSTYIHEPPYFKGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGNINKDSPAAKYLLERGVEQKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGAKTVHIPTGEKLYVFDAAQRYKAEGKDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSKISEIRPGQDVTVTTDNGKSFTCTARFDTEVELAYFNHGGILPYVIRNLIKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVM8</accession>
    <name>V7BVM8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">U-box domain-containing protein</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G119200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVM8"/>
    <dbReference type="SMR" id="V7BVM8"/>
    <dbReference type="Gramene" id="ESW22014">
        <property type="protein sequence ID" value="ESW22014"/>
        <property type="gene ID" value="PHAVU_005G119200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR5G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEIPQFF"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF128">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="6">
        <location>
            <begin position="5"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="46597" checksum="542BD27559F28FE1" modified="2014-02-19" version="1">MTEIEIPQFFACPISLQIMKDPVTTVTGITYDRESIEYWLLKAKNCTCPITQQPLPRNSEFLTPNHTLRRLIQAWCSANEANGVDQIPTPKSPLSNANVEKLVKDLEVPPRFQNAIEKLHDLAVENERNRRCMASAGVAEAMVQVITKSFTQDKTSSCIEEALRILRLLWSSANVMDSNYMKRLLGQNFDFLNSLTRVLQLQTKNNVKVINEAMPILKLTIEAKDSTPLGNLGLEFFRVVVKVMKNRELSQQAIKSALYVLIETCPLGRNRTKIVDAGAVEELVELALENPEKNLTELVFILLAHLCSCADGRDQFLQHAASIAVVSKRILRVSPTIDDRALHIFSLISKFSASHEVVQEMLRVGAVSKLCMVLQADSASYLKEKARSVLRLHSKTWNNSPCIQVYLFTRFQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVQ2</accession>
    <name>V7BVQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Nucleobase-ascorbate transporter 12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G127000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVQ2"/>
    <dbReference type="SMR" id="V7BVQ2"/>
    <dbReference type="STRING" id="3885.V7BVQ2"/>
    <dbReference type="Gramene" id="ESW22097">
        <property type="protein sequence ID" value="ESW22097"/>
        <property type="gene ID" value="PHAVU_005G127000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1292">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRVDTSY"/>
    <dbReference type="OrthoDB" id="1641903at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11119">
        <property type="entry name" value="XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="264"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="308"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="344"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="424"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="508"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="535"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="566"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="621"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="45"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="96"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="120"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="691" mass="74686" checksum="5962365E43DF18EA" modified="2014-02-19" version="1">MADSDPKPPHRAGPWPPATLPDAKAMPPSTWAKKTGFKPKFSGEANASDSGQISLQPKPKEPDTNVDLEAGRARATTTANGVAHRDKVPPLPPPKDQVEKKRRDSEGVPKSSVSSTNGQAPPPPPPPPPGRRAPSHEDIVDDDGFVSRHSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILVPLVMVPAMGGSREDTSAVVSTVLFVSGMTTLLHSNFGSRLPLIQGSSFVYLAPALAIINSSEFQGLNENKFKHIMKELQGAIIIGSAFQAFLGYTGLMSLLVRLINPVVVSPTIAAVGLSFYSYGFPLVGTCLEIGAVQILVVIVFSLYLRKISVFGHRIFLIYAVPLGLAITWAVAFLLTEAGVYNYNGCDINIPASNMISEHCRKHVSKMKQCRVDTSYALEASPWFRFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGATTLTENVHTIAVTKMGSRRAIQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNSSVPSYFQPYIVASHGPFRTQYGGLNYFLNTTFSLHMVVAFLVAVILDNTVPGSKQERGVYVWSETEVARREPAVANDYELPLRVGRIFRWVKWVGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXR2</accession>
    <name>V7BXR2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_005G104600g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the expansin family. Expansin B subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXR2"/>
    <dbReference type="SMR" id="V7BXR2"/>
    <dbReference type="STRING" id="3885.V7BXR2"/>
    <dbReference type="Gramene" id="ESW21853">
        <property type="protein sequence ID" value="ESW21853"/>
        <property type="gene ID" value="PHAVU_005G104600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPVQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASEWLEM"/>
    <dbReference type="OrthoDB" id="406505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006949">
        <property type="term" value="P:syncytium formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22275">
        <property type="entry name" value="DPBB_EXPB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.760:FF:000002">
        <property type="entry name" value="Beta-expansin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.40.10:FF:000004">
        <property type="entry name" value="Expansin B3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.760">
        <property type="entry name" value="Expansin, cellulose-binding-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="entry name" value="RlpA-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007118">
        <property type="entry name" value="Expan_Lol_pI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007112">
        <property type="entry name" value="Expansin/allergen_DPBB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007117">
        <property type="entry name" value="Expansin_CBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036749">
        <property type="entry name" value="Expansin_CBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005795">
        <property type="entry name" value="LolPI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009009">
        <property type="entry name" value="RlpA-like_DPBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31692">
        <property type="entry name" value="EXPANSIN-B3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31692:SF5">
        <property type="entry name" value="EXPANSIN-B3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03330">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01357">
        <property type="entry name" value="Expansin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01225">
        <property type="entry name" value="EXPANSNFAMLY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00829">
        <property type="entry name" value="LOLP1ALLERGN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00837">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="Barwin-like endoglucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49590">
        <property type="entry name" value="PHL pollen allergen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50843">
        <property type="entry name" value="EXPANSIN_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50842">
        <property type="entry name" value="EXPANSIN_EG45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755149" evidence="11">
        <location>
            <begin position="24"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like EG45" evidence="12">
        <location>
            <begin position="54"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like CBD" evidence="13">
        <location>
            <begin position="175"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00053397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW21853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="28439" checksum="1FA994C8FCF67F85" modified="2014-02-19" version="1">MQRHRVSAVFFLSSCFSIALVYAQGQTPHTVLDQHWYPGTATWYGEPEGDGSTGGACGYGTLVDVKPLKARVGAVGSMLFQKGEGCGACYKVKCLDHSICAKRAVTVIVTDECPGCPSDRTHFDLSGSAFGRMAFAGENGQLRNRGEIPVIYRRTPCKYAGKNIAFHVNEGSTPFWLSLLVEFEDGDGDISSMYIQEAGSSEWLQMNHVWGANWCIVRGPLRGPFSVKVSTSTGKSLTAKDVIPSNWITKATYTSRLNFLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY20</accession>
    <name>V7BY20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transferring glycosyl group transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G113100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY20"/>
    <dbReference type="STRING" id="3885.V7BY20"/>
    <dbReference type="Gramene" id="ESW21945">
        <property type="protein sequence ID" value="ESW21945"/>
        <property type="gene ID" value="PHAVU_005G113100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AIRECNY"/>
    <dbReference type="OrthoDB" id="421979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000006">
        <property type="entry name" value="Fringe-related protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006740">
        <property type="entry name" value="DUF604"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10811">
        <property type="entry name" value="FRINGE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04646">
        <property type="entry name" value="DUF604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="470" mass="53402" checksum="77134037B8801C57" modified="2014-02-19" version="1">MESFKNQIKTQILMKFILVCSSFFAISLCVSVLLLAKTKIVELRYSPQHDVSESDPTTADHLVFGIASTGTSWPSRKQYIKLWWNSIPNITMRGCVFVDALPHEENVNNDGSLPPLCVSQDTSQFLYTYKGGLRSAIRVTRVVKETVALNHSGVRWYVFGDDDTIFFPHNLVKTLSKYDHRLWYYVGSYSEIYEGTQVFGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLYGSDSRVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPLTPLLSLHHPDHTDPIFPNMSTKTSLQHLFEAVHVDSERILEQTVCYEKQLSWTISVSWGYAVEVFQNNMLLPEVLRVERTFRQWLVGNVLRGIYNFNTREVHPDPCKRGTIFYLDKVSSGKDGIISSYKRDFQNCSYEASMSKLEVIKVVTNKLHLDNKQTPRRHCCDVLPSNAGNMMEIAIRECNYEELIYMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYA5</accession>
    <name>V7BYA5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">folate gamma-glutamyl hydrolase</fullName>
            <ecNumber evidence="3 9">3.4.19.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G080700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7 9">
            <text>(6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)(n) + (n-1) H2O = (6S)-5,6,7,8-tetrahydrofolate + (n-1) L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:56784"/>
            <dbReference type="Rhea" id="RHEA-COMP:14738"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:141005"/>
            <dbReference type="EC" id="3.4.19.9"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase C26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.9" evidence="3 9"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYA5"/>
    <dbReference type="SMR" id="V7BYA5"/>
    <dbReference type="STRING" id="3885.V7BYA5"/>
    <dbReference type="Gramene" id="ESW21556">
        <property type="protein sequence ID" value="ESW21556"/>
        <property type="gene ID" value="PHAVU_005G080700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1559">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPVSSHF"/>
    <dbReference type="OrthoDB" id="64220at2759"/>
    <dbReference type="PhylomeDB" id="V7BYA5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034722">
        <property type="term" value="F:gamma-glutamyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046900">
        <property type="term" value="P:tetrahydrofolylpolyglutamate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.880:FF:000024">
        <property type="entry name" value="Folate gamma-glutamyl hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015527">
        <property type="entry name" value="Pept_C26_g-glut_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011697">
        <property type="entry name" value="Peptidase_C26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11315:SF0">
        <property type="entry name" value="FOLATE GAMMA-GLUTAMYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11315">
        <property type="entry name" value="PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07722">
        <property type="entry name" value="Peptidase_C26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="Class I glutamine amidotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51273">
        <property type="entry name" value="GATASE_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51275">
        <property type="entry name" value="PEPTIDASE_C26_GGH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757211" description="folate gamma-glutamyl hydrolase" evidence="10">
        <location>
            <begin position="24"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8 9">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR615527-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW21556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="38129" checksum="F8BB72C5A6CA38D0" modified="2014-02-19" version="1">MSSGAVWVLFLLAFSLCPLPSAGVRSEIVLPSQLRRVSTTSCPAPDPNLYYQPVIGIVSHPGDGASGRLSNETGVSYIAASYVKFVEAAGARVVPLIYNEPPEKLLKKLELVNGVLFTGGWAKNGLYFETVTKIFKKILEKNDAGDHFPLYAVCLGFELITMIISEDNNILEEFTASNQASTIQFVESANIEESLFQRFPPELLRKMTTDCLVMQNHRYGISPGKLLDNRKLSSFFEILTTCSDEDDKVYVSTVRSRNYPVTGFQWHPEKNAFEWGSPRIPHTEDAVQITQHVANFLVSEARKSINRPFTQEVLDNLVYNYSPTYGGKAGKGYDEVYLFAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7C016</accession>
    <name>V7C016_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G173700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7C016"/>
    <dbReference type="STRING" id="3885.V7C016"/>
    <dbReference type="Gramene" id="ESW22688">
        <property type="protein sequence ID" value="ESW22688"/>
        <property type="gene ID" value="PHAVU_005G173700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0065">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QILWGEK"/>
    <dbReference type="OrthoDB" id="66620at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03233">
        <property type="entry name" value="ABCG_PDR_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03232">
        <property type="entry name" value="ABCG_PDR_domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000179">
        <property type="entry name" value="ABC transporter G family member 34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000059">
        <property type="entry name" value="ABC transporter G family member 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043926">
        <property type="entry name" value="ABCG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034001">
        <property type="entry name" value="ABCG_PDR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034003">
        <property type="entry name" value="ABCG_PDR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013581">
        <property type="entry name" value="PDR_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48040:SF20">
        <property type="entry name" value="PLEIOTROPIC DRUG RESISTANCE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48040">
        <property type="entry name" value="PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19055">
        <property type="entry name" value="ABC2_membrane_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08370">
        <property type="entry name" value="PDR_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="521"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="554"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="605"/>
            <end position="627"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="639"/>
            <end position="658"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="664"/>
            <end position="687"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="743"/>
            <end position="767"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1171"/>
            <end position="1190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1258"/>
            <end position="1278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1285"/>
            <end position="1309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1315"/>
            <end position="1334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1346"/>
            <end position="1365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="1394"/>
            <end position="1417"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="152"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="826"/>
            <end position="1078"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW22688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1425" mass="160542" checksum="12A36CE51888A710" modified="2014-02-19" version="1">MEGSDIYRASNSMRARSSTVWRNNSVEVFSRSSREEDDEEALKWAALEKLPTYNRLRKGLLTASHGAANEIDVADLGYQERHKLLERLVKVAEEDNESFLLKLKDRIDRVGLDIPTIEVRYEHLKIEAEAFVGGRALPSFINSATNVIEGFLNFLHILPSRKKHVTILKDVSGVIKPRRMTLLLGPPSSGKTTLLLALSGKLDKSLQVSGKVTYNGHELNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLSELSRREKAANIKPDPDLDVYMKATATAGQESSIVTDYTMKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSCLRQYVHILNGTAVISLLQPAPETYDLFDDIILISDGQVVYHGPREYVLDFFESMGFRCPERKGAADFLQEVTSKKDQAQYWVRRDQPYRFVTVTQFAEAFQSFHIGRKLGQELAVSFDKTKSHPAALTTKKFGINKKELLKANFSREYLLMKRNSFVYIFKLCQLFIMALIALTLFFRTEMDHDSLDGAGVYAGAIFFTIITVMFNGMAEISMTIAKLPVFYKQRDLLFFPSWAYAIPSWILKIPVTIAEVALWVFLTYYVIGYDPNVGRLFKQYLILLLISQMASSLFRAIAALGRNMIVANTFGSFSVLTLLTLGGFILSKRDIKKWWIWGFWISPLMYGQNALMTNEFLGNSWHNDTHNLGLDYLDSRAFFKDAYWYWLGLGALVGFVLFFNVVFGFALDFLGPFDKPQAVIAEEPTHEGSPAEVELPRIETGKDGSVVESSHGKKKGMVLPFEPHSITFDEVVYSVDMPQEMKEQGVQEDKLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSSVDSKTRKMFIEEVMELVELNPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSSHLIKYFESIDGVSKIKDGYNPATWMLEVTTTAQELGLGVDFTDLYRNSDLYRRNKQLIQELGQPAPGSKDLYFPTQFSQNFFVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIAIMFGTMFWDLGGKRSTRGDLMNALGSMYTAVLFLGVQNSSSVQPVVAVERTVFYREKAAGMYSALPYAFSQILVELPYIFTQAVTYGVIVYAMIGFEWTAEKFFWYLFFMYFTLLYFTFYGMMGVAVTPNHHVASIVSAAFYAIWNLFSGFVVARPSIPIWWRWYYWACPVAWTLYGLVGSQFGDVMELMEAEGNKTVKAFIEDSYGIKHDFIGVAAVVVAGIAVLFGFTFAVAIKTFNFQKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0W1</accession>
    <name>V7C0W1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G0077000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0W1"/>
    <dbReference type="STRING" id="3885.V7C0W1"/>
    <dbReference type="Gramene" id="ESW22935">
        <property type="protein sequence ID" value="ESW22935"/>
        <property type="gene ID" value="PHAVU_004G0077000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RENYEHI"/>
    <dbReference type="OrthoDB" id="1700985at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="11"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="176"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="313" mass="34766" checksum="AA30EAA11B4BC1FF" modified="2014-02-19" version="1" fragment="single">MAAEAVGGALLSVAFDRLASPQVLDFFRTKLDEKLLANLNNKLNSINAVADDAELKQLTDPRVKTWLVAVKEAVFDAEDLLGEIDYELTRCQVEAPYEPQTFTHKVSNFFKSILFNNKIKSGMKEVLENLEYLANQKGDLGLKEGTYSGDGSGSNIPQKLPSSSLVAESVIYGRDADKDIIINWLTSETDNLNQPSILSIVGMGGLGKTTLAQHVFSDPKIEDAKFDIKAWVCVSDHFHVLTVTRTILESITNQKDDSGNLEMVHKKLKEKLLGKRFLLVLDDVWNERPAEWEAVRTPLSYGAPGIRILVTTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C378</accession>
    <name>V7C378_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">(S)-hydroxynitrile lyase</fullName>
            <ecNumber evidence="16">4.1.2.47</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18">2-hydroxy-2-methylpropanenitrile lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="19">Acetone cyanohydrin lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="20">Hydroxynitrile lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_004G078700g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>2,2-dimethylpropanal + hydrogen cyanide = (2S)-2-hydroxy-3,3-dimethylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77407"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:141557"/>
            <dbReference type="ChEBI" id="CHEBI:197355"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2-hydroxy-2-methylpropanenitrile = acetone + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:11932"/>
            <dbReference type="ChEBI" id="CHEBI:15347"/>
            <dbReference type="ChEBI" id="CHEBI:15348"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:11933"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>2-methylpropanal + hydrogen cyanide = (2S)-2-hydroxy-3-methylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77403"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:48943"/>
            <dbReference type="ChEBI" id="CHEBI:197354"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>3-formylthiophene + hydrogen cyanide = (2S)-2-hydroxy-2-(thiophen-3-yl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77459"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:87611"/>
            <dbReference type="ChEBI" id="CHEBI:197333"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>4-methoxybenzaldehyde + hydrogen cyanide = (2S)-2-hydroxy-2-(4-methoxyphenyl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77447"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:28235"/>
            <dbReference type="ChEBI" id="CHEBI:197328"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>a disubstituted aliphatic (S)-hydroxynitrile = a ketone + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:56592"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:140597"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a monosubstituted aliphatic (S)-hydroxynitrile = an aldehyde + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:56588"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:140596"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>acrolein + hydrogen cyanide = (2S)-2-hydroxybut-3-enenitrile</text>
            <dbReference type="Rhea" id="RHEA:77411"/>
            <dbReference type="ChEBI" id="CHEBI:15368"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:197356"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>an aromatic (S)-hydroxynitrile = an aromatic aldehyde + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:54660"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:33855"/>
            <dbReference type="ChEBI" id="CHEBI:138306"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>benzaldehyde + hydrogen cyanide = (S)-mandelonitrile</text>
            <dbReference type="Rhea" id="RHEA:77427"/>
            <dbReference type="ChEBI" id="CHEBI:17169"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:36941"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>butan-2-one + hydrogen cyanide = 2-hydroxy-2-methylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77467"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:28398"/>
            <dbReference type="ChEBI" id="CHEBI:60954"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="7">
            <dbReference type="Rhea" id="RHEA:77469"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>cyclohexanecarbaldehyde + hydrogen cyanide = (2S)-2-cyclohexyl-2-hydroxyacetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77423"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:197359"/>
            <dbReference type="ChEBI" id="CHEBI:197360"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>formylthiophene + hydrogen cyanide = (2R)-2-hydroxy-2-(thiophen-2-yl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77455"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:87301"/>
            <dbReference type="ChEBI" id="CHEBI:197332"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the AB hydrolase superfamily. Hydroxynitrile lyase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.47" evidence="16"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C378"/>
    <dbReference type="SMR" id="V7C378"/>
    <dbReference type="Gramene" id="ESW23823">
        <property type="protein sequence ID" value="ESW23823"/>
        <property type="gene ID" value="PHAVU_004G078700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR2J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QRAMIAG"/>
    <dbReference type="OrthoDB" id="408373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047606">
        <property type="term" value="F:(S)-hydroxynitrile lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080030">
        <property type="term" value="F:methyl indole-3-acetate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080032">
        <property type="term" value="F:methyl jasmonate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080031">
        <property type="term" value="F:methyl salicylate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009694">
        <property type="term" value="P:jasmonic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009696">
        <property type="term" value="P:salicylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000051">
        <property type="entry name" value="(S)-hydroxynitrile lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045889">
        <property type="entry name" value="MES/HNL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992:SF1083">
        <property type="entry name" value="METHYLESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992">
        <property type="entry name" value="METHYLESTERASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="21">
        <location>
            <begin position="8"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00050104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00050241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00050262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00050358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00050608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00051735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00051977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00052033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00052511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00052600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00052609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00052826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00060885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00066572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00069221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00076040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00078291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00079794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW23823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="257" mass="28956" checksum="66E9C91576B94747" modified="2014-02-19" version="1">MGLEKKHFVLVHGACHGAWCWYKLKPRLESAGHKVTALDLAASGINLQKMEDVHTFSQYSEALLQLLATIPPNEKVILVGHSLGGLNIALAMEQFPEKILVGVFLTAFTPDIEHQPSYVLEKYNERTPSAAWIDTEFSPCANKTLMFFGPKFFSDKLYQLTSIEDLELGKSLARVSSLFIEDLSKQKQFSKEGYGSVPRAFILCTEDLAIPLEYQQWMIQNSALNDVLEIKGADHMPMLCMPQELFDSLHQIATKYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C735</accession>
    <name>V7C735_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G082800g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. RAF subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C735"/>
    <dbReference type="SMR" id="V7C735"/>
    <dbReference type="STRING" id="3885.V7C735"/>
    <dbReference type="Gramene" id="ESW25997">
        <property type="protein sequence ID" value="ESW25997"/>
        <property type="gene ID" value="PHAVU_003G082800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WQMTTKE"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7C735"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13999">
        <property type="entry name" value="STKc_MAP3K-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000316">
        <property type="entry name" value="serine/threonine-protein kinase HT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000060">
        <property type="entry name" value="Serine/threonine-protein kinase isoform 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051681">
        <property type="entry name" value="Ser/Thr_Kinases-Pseudokinases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329:SF277">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE HT1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00109">
        <property type="entry name" value="TYRKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="84"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW25997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="381" mass="43523" checksum="3C83BB601B4F242F" modified="2014-02-19" version="1">MHFARASMAGSCFHALRLRRFKSKPLPEPSSSSKTRLDSDLENMERRRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRALLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVCTLEKYDECVKEGLPLTHHSGLVSKNIIIERLKGCVSMSSSIPVQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7C773</accession>
    <name>V7C773_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">pectinesterase</fullName>
            <ecNumber evidence="4">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G015700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Acts in the modification of cell walls via demethylesterification of cell wall pectin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n methanol + n H(+)</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the pectinesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="4"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C773"/>
    <dbReference type="SMR" id="V7C773"/>
    <dbReference type="Gramene" id="ESW25198">
        <property type="protein sequence ID" value="ESW25198"/>
        <property type="gene ID" value="PHAVU_003G015700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVK0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTDNWIN"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000013">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31321">
        <property type="entry name" value="ACYL-COA THIOESTER HYDROLASE YBHC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31321:SF76">
        <property type="entry name" value="PECTINESTERASE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="5" id="KW-0134">Cell wall</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5011110388" description="pectinesterase" evidence="11">
        <location>
            <begin position="23"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase catalytic" evidence="12">
        <location>
            <begin position="43"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00057335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW25198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="339" mass="37851" checksum="4187588DB1BF45FB" modified="2014-02-19" version="1">MFLALSSFVTLFLLASNEVVLANFHHYHHHVQDDKSVLVERLITVDQSGHGDFTKIQAAIDSVPSNNKNWISIKVNSGTYREKVMIPEDKPYIVLKGVGKRCTIVEWDDHDSSAQSPTFLSMADNIVVKAITFRNTYNDAKKGNPMTPALAGMITGDKTSFFQVGFYGLQDTLWDVKGRHYFNSCTIEGAMDFIFGAGQSLHENCMISVREAFPGKAVIGFITAQGRTDPEDSNGFVFKNCKIFGVGKTYLGRPWRDYARVLFYKTMMSSIVQPLGWQPWNSTSNVAKVTFAESDNFGLGSSLSGRVSWLKKLDPATITNMTSIRFVDTEGWINAHQIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAA7</accession>
    <name>V7CAA7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G070500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAA7"/>
    <dbReference type="SMR" id="V7CAA7"/>
    <dbReference type="Gramene" id="ESW25851">
        <property type="protein sequence ID" value="ESW25851"/>
        <property type="gene ID" value="PHAVU_003G070500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1237">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WYYGTST"/>
    <dbReference type="OrthoDB" id="8904098at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17416">
        <property type="entry name" value="MFS_NPF1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000109">
        <property type="entry name" value="POT_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11654">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00854">
        <property type="entry name" value="PTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="376"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="418"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="459"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="501"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="544"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="7"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="589" mass="65347" checksum="C12E5F3454D1AD9D" modified="2014-02-19" version="1">MEPTLRNLPTTASESSHTNPKKKRGGWKAITFILGNETFERLAVFGLFANFMVYLTRELHLDQVTASNILSLWFGITNFAPLIGAFISDAYVGRFRTIAFASFGTLLGMIVVTLTSWLPQLHPPPCSPEEVASGECVRASNSQMGVLVLGLCLLTIGSSGVRPCSIPFGVDQFDSTTEEGKKGMKSYFNWYYTTFTMVLLVTQTVVVYIQDSVSWKIGFGIPTLCMLCSIIMFFVGTSFYVHVKPEGSIFSGVARVLVAAYTKRKLRFPTTEEKPEGAFYDPPLLGTTVLSKLPLTKQFRALNKGALIMEGELNPDGSIVNQWRLVSIQQVEEVKCLARIIPIWAAGILSLTSMAQQGTFTVSQALKMNRHLGPNFQIPAGSLMVISLITIALWLPFYDSFLVPKLRKITKHEGGITLLLRIGIGMVFSILSMVVVGMVEKVRRDSANSNPTPLGIAPMSVLWLAPHLILMGLCEAFNIIGQIEFFNSQFPEHMRSIGNSLFSCSFAAANYVSTIMVNVVHHTTTTHSHPDWLTNDINSGRIDYFYYLIAVLSTLNLIFFTFVARRYQYKGSVDFNDQTHEVELGSHKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBZ4</accession>
    <name>V7CBZ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Ionotropic glutamate receptor C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_003G149500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBZ4"/>
    <dbReference type="Gramene" id="ESW26800">
        <property type="protein sequence ID" value="ESW26800"/>
        <property type="gene ID" value="PHAVU_003G149500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1052">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WICTLAS"/>
    <dbReference type="OrthoDB" id="5984008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated monoatomic ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.10">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019594">
        <property type="entry name" value="Glu/Gly-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015683">
        <property type="entry name" value="Ionotropic_Glu_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18966">
        <property type="entry name" value="IONOTROPIC GLUTAMATE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00060">
        <property type="entry name" value="Lig_chan"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10613">
        <property type="entry name" value="Lig_chan-Glu_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53850">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9" id="KW-1071">Ligand-gated ion channel</keyword>
    <keyword evidence="6 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0675">Receptor</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0732">Signal</keyword>
    <keyword evidence="3 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755601" description="Ionotropic glutamate receptor C-terminal domain-containing protein" evidence="12">
        <location>
            <begin position="29"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="413"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="domain" description="Ionotropic glutamate receptor C-terminal" evidence="13">
        <location>
            <begin position="41"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW26800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="478" mass="53748" checksum="30FF65F892D49B57" modified="2014-02-19" version="1">MKDKCFFSIFYWFLIVLLVLLQSPTVNGSNGRLKNGEIKLRVTVPIHGFPQFVYVVWDPSQQKYTVSGYCMDVFYAVVTRLPFNVSLHIVPSAVELNQVSRRHHAILKQMSTESEVVVGDFTIRANRSNYVDFTVPYTASGVKMVVPVQHGRDQNMWTFVKPFSWDLWLSIIIISTFIGLAILIMERNVSALPNQEGSPNQKKLCPATILWFPISQAILPERQVVVKSCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLQPSFLNANDLRKGGYFVGYQTGSFVQDVLVKQFKFDPSKLKPYNSSSEYHEALKLGSENGGVAAIFDEVPYLKLYIQEYGSNYIMAGPKYRNAGFGFALTLNSNLTACFSRAILDVTESDLMNEIEEKYFGKNDIGQDSSGEVSSAPLSLSFHSFAGLFMITGISTLFALLISESVIWQKPILMAKALSQRYLSFKPSSTEIRVHPTHDSTIGIEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC08</accession>
    <name>V7CC08_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G150500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC08"/>
    <dbReference type="SMR" id="V7CC08"/>
    <dbReference type="STRING" id="3885.V7CC08"/>
    <dbReference type="Gramene" id="ESW26815">
        <property type="protein sequence ID" value="ESW26815"/>
        <property type="gene ID" value="PHAVU_003G150500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2942">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1887732at2759"/>
    <dbReference type="PhylomeDB" id="V7CC08"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053091">
        <property type="entry name" value="PSII_Assembly/Photoprotect-Rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37752">
        <property type="entry name" value="OS02G0610700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37752:SF1">
        <property type="entry name" value="OS02G0610700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103511">
        <property type="entry name" value="Chlorophyll a-b binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW26815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="16511" checksum="2587ED21905116AE" modified="2014-02-19" version="1">MATILPSSNPHFLSFNAPHRSPTFLRGRENLSSCRLRLTYSNRWGQIKEQDVSIFSNRTGGQAVRVLVASGKGDAVMVDPVEAKRLAAKQMERIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKSILTQLQDYLGAIVGFFVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC23</accession>
    <name>V7CC23_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sugar phosphate transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G121200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC23"/>
    <dbReference type="SMR" id="V7CC23"/>
    <dbReference type="STRING" id="3885.V7CC23"/>
    <dbReference type="Gramene" id="ESW26456">
        <property type="protein sequence ID" value="ESW26456"/>
        <property type="gene ID" value="PHAVU_003G121200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1441">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKMMMIN"/>
    <dbReference type="OrthoDB" id="6418713at2759"/>
    <dbReference type="PhylomeDB" id="V7CC23"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004853">
        <property type="entry name" value="Sugar_P_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050186">
        <property type="entry name" value="TPT_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11132">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03151">
        <property type="entry name" value="TPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="38"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="133"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="279"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar phosphate transporter" evidence="6">
        <location>
            <begin position="11"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="378" mass="42241" checksum="7A435506CD02FB25" modified="2014-02-19" version="1">MINKTLFFTYFYLFVYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFFLVRVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLVAVICGTDKARCDVFFNMLLVSVGVVISSYGEINFNVVGTVYQVTGIFAEALRLVLTQVLLQKKGLSLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTVRVAGVLKDWILIALSTVIFPESAITWLNIIGYAIALCGVVMYNYIKVRDVRASQSPAEIIPDRMTKDWKFEKRSSDLYMPDNVSGGSSGGNGSLSDMNFDEEAPLISSSRVSHIGRMQLANHAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCQ7</accession>
    <name>V7CCQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G171600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCQ7"/>
    <dbReference type="SMR" id="V7CCQ7"/>
    <dbReference type="Gramene" id="ESW27075">
        <property type="protein sequence ID" value="ESW27075"/>
        <property type="gene ID" value="PHAVU_003G171600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFKSIMH"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000018">
        <property type="entry name" value="2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="6">
        <location>
            <begin position="197"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="350" mass="39386" checksum="12F4C1EE7EF0E45A" modified="2014-02-19" version="1">MAGNLLVSEEKSVSKGVQQMSIEGDEPPSQYIVKGNTFGSKDSSALIPIPVIDVSLLSSEAELENLRSALSSAGCFQAIGHGMSSSYLEKIREVAKQFFALPEEEKQKYGRAVNESEGYGNDRVVSDKQVLDWSYRLSLRVFPQKVRRLSLWPKNPTDFSEKLEEFSTKVKSMMDYLLRCMARSLNLPEGSFLDQFGEESMMLARFNFYPRCSRPDLVLGVKPHTDRSGITVLLQDKEVEGLQVLIDDNWVSVPTMPDAFVVNLGDQMQIMSNGIFKSIMHRVVTNTEKMRMSLAIFNEPDPGNEIGPAEGLIDESRPRLYRSVKDYGHINYKCYQEGKIPLETLKIADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCU1</accession>
    <name>V7CCU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">(S)-hydroxynitrile lyase</fullName>
            <ecNumber evidence="16">4.1.2.47</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18">2-hydroxy-2-methylpropanenitrile lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="19">Acetone cyanohydrin lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="20">Hydroxynitrile lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_003G248300g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>2,2-dimethylpropanal + hydrogen cyanide = (2S)-2-hydroxy-3,3-dimethylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77407"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:141557"/>
            <dbReference type="ChEBI" id="CHEBI:197355"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2-hydroxy-2-methylpropanenitrile = acetone + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:11932"/>
            <dbReference type="ChEBI" id="CHEBI:15347"/>
            <dbReference type="ChEBI" id="CHEBI:15348"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:11933"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>2-methylpropanal + hydrogen cyanide = (2S)-2-hydroxy-3-methylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77403"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:48943"/>
            <dbReference type="ChEBI" id="CHEBI:197354"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>3-formylthiophene + hydrogen cyanide = (2S)-2-hydroxy-2-(thiophen-3-yl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77459"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:87611"/>
            <dbReference type="ChEBI" id="CHEBI:197333"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>4-methoxybenzaldehyde + hydrogen cyanide = (2S)-2-hydroxy-2-(4-methoxyphenyl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77447"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:28235"/>
            <dbReference type="ChEBI" id="CHEBI:197328"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>a disubstituted aliphatic (S)-hydroxynitrile = a ketone + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:56592"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:140597"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a monosubstituted aliphatic (S)-hydroxynitrile = an aldehyde + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:56588"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:140596"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>acrolein + hydrogen cyanide = (2S)-2-hydroxybut-3-enenitrile</text>
            <dbReference type="Rhea" id="RHEA:77411"/>
            <dbReference type="ChEBI" id="CHEBI:15368"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:197356"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>an aromatic (S)-hydroxynitrile = an aromatic aldehyde + hydrogen cyanide</text>
            <dbReference type="Rhea" id="RHEA:54660"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:33855"/>
            <dbReference type="ChEBI" id="CHEBI:138306"/>
            <dbReference type="EC" id="4.1.2.47"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>benzaldehyde + hydrogen cyanide = (S)-mandelonitrile</text>
            <dbReference type="Rhea" id="RHEA:77427"/>
            <dbReference type="ChEBI" id="CHEBI:17169"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:36941"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>butan-2-one + hydrogen cyanide = 2-hydroxy-2-methylbutanenitrile</text>
            <dbReference type="Rhea" id="RHEA:77467"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:28398"/>
            <dbReference type="ChEBI" id="CHEBI:60954"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="7">
            <dbReference type="Rhea" id="RHEA:77469"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>cyclohexanecarbaldehyde + hydrogen cyanide = (2S)-2-cyclohexyl-2-hydroxyacetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77423"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:197359"/>
            <dbReference type="ChEBI" id="CHEBI:197360"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>formylthiophene + hydrogen cyanide = (2R)-2-hydroxy-2-(thiophen-2-yl)acetonitrile</text>
            <dbReference type="Rhea" id="RHEA:77455"/>
            <dbReference type="ChEBI" id="CHEBI:18407"/>
            <dbReference type="ChEBI" id="CHEBI:87301"/>
            <dbReference type="ChEBI" id="CHEBI:197332"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the AB hydrolase superfamily. Hydroxynitrile lyase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.47" evidence="16"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCU1"/>
    <dbReference type="SMR" id="V7CCU1"/>
    <dbReference type="Gramene" id="ESW27969">
        <property type="protein sequence ID" value="ESW27969"/>
        <property type="gene ID" value="PHAVU_003G248300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR2J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDYCKPL"/>
    <dbReference type="OrthoDB" id="408373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047606">
        <property type="term" value="F:(S)-hydroxynitrile lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080030">
        <property type="term" value="F:methyl indole-3-acetate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080032">
        <property type="term" value="F:methyl jasmonate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080031">
        <property type="term" value="F:methyl salicylate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009694">
        <property type="term" value="P:jasmonic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009696">
        <property type="term" value="P:salicylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000051">
        <property type="entry name" value="(S)-hydroxynitrile lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045889">
        <property type="entry name" value="MES/HNL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992:SF1083">
        <property type="entry name" value="METHYLESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992">
        <property type="entry name" value="METHYLESTERASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="21" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755633" description="(S)-hydroxynitrile lyase" evidence="21">
        <location>
            <begin position="23"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="AB hydrolase-1" evidence="22">
        <location>
            <begin position="29"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00050104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00050241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00050262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00050358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00050608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00051735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00051977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00052033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00052511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00052600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00052609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00052826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00060885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00066572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00069221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00076040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00078291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00079794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW27969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="277" mass="31087" checksum="F9C7D01607490252" modified="2014-02-19" version="1">MSSEKIVFIFILCMSLISSGHCKDRKHYVLVHGGCHGAWSWYKLKPLLESAGHKVTALDLAASGINMQKIEDVHTFSQYTEPLLLLLAKIPPNEKVILVGHGSGGLNIALAMEKFPEKILAGVFVTAFVPDTEHNPSYVLEKYGEMTPSSAWMDTEFEQSGNKTTLLFGPKFLANKLYQLSPTQDLELAKTLVRPSSLFLEDLSRQKKFSKERYGSVPRSYIVCTIDLAITLDYQRWMIQNAGINNVVHIEGANHMVMNSKPRQLLDSLQKIVTKYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD66</accession>
    <name>V7CD66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">COBRA-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G183000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the COBRA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD66"/>
    <dbReference type="STRING" id="3885.V7CD66"/>
    <dbReference type="Gramene" id="ESW27205">
        <property type="protein sequence ID" value="ESW27205"/>
        <property type="gene ID" value="PHAVU_003G183000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTGW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIHRPIG"/>
    <dbReference type="OrthoDB" id="2012261at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010215">
        <property type="term" value="P:cellulose microfibril organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052324">
        <property type="term" value="P:plant-type cell wall cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056900">
        <property type="entry name" value="COB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006918">
        <property type="entry name" value="COBRA_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31673">
        <property type="entry name" value="PROTEIN COBRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31673:SF61">
        <property type="entry name" value="PROTEIN COBRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25079">
        <property type="entry name" value="COB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04833">
        <property type="entry name" value="COBRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038122">
        <property type="entry name" value="COBRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756040" description="COBRA-like protein" evidence="9">
        <location>
            <begin position="38"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="434"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="domain" description="COBRA C-terminal" evidence="10">
        <location>
            <begin position="233"/>
            <end position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR038122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF25079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="454" mass="50747" checksum="64BE00016633547C" modified="2014-02-19" version="1">MESVWLSTTGSAVPRSGFLAFLLLSLLLCTTFSSTEAYDALDPTGNITIKWDVISWTPDGYMAVVTMYNFQQYRHIEAPGWILGWTWAKKEVIWNVMGGQTTEQGDCSRFKGNIPHCCKKDPTIVDLLPGSPYNQQIANCCTGGVLTSWAQDPEHAISSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRSTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNRTEPSSCVDPNSPHLASVVSPPGKSINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYVVNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYVGLNDTGMLWGVKFYNDLLTSAGPFGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNANSKLVFSLLSTVFGTLACVVMLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDH7</accession>
    <name>V7CDH7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G193400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDH7"/>
    <dbReference type="SMR" id="V7CDH7"/>
    <dbReference type="STRING" id="3885.V7CDH7"/>
    <dbReference type="Gramene" id="ESW27340">
        <property type="protein sequence ID" value="ESW27340"/>
        <property type="gene ID" value="PHAVU_003G193400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1237">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTLYYMG"/>
    <dbReference type="OrthoDB" id="8904098at2759"/>
    <dbReference type="PhylomeDB" id="V7CDH7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17416">
        <property type="entry name" value="MFS_NPF1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000109">
        <property type="entry name" value="POT_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11654">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00854">
        <property type="entry name" value="PTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="335"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="417"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="505"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="548"/>
            <end position="571"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="600" mass="66495" checksum="E6752BD1747EC8AB" modified="2014-02-19" version="1">MNLVGKRDSGPEIMEKNEAEEEPKINYRGWKVMPLIIGNETFEKLGTIGTLANLLVYLTTVFNLDSITATNIINIFNGSASLSTVVGAFLCDTYFGRYSTLGFCTVSSFLGLLVIQLTAWIKEMHPPSCGKENSTCTGPSTGQMAFLLCGFGLLIVGAAGIRPCNLAFGVDQFNPNTESGKKGINSFFNWYFFTFTFAQMVSVSLIVYVQTNVSWALGLGIPAVLMLLACTLYYMGTNYYVKVKPIGKAPLTTIVQAIVVAVKKRKLNLPQQSLLSLFNYISPHSLNSKLPHTSQFRFLDKAAIITPKDDINPDGSASDPWNLCSMQQVEELKCLVRVIPIWVSGIFFFVVIVQQNTMLVLQTLQADRRVLNSNFEIPAASYTIFQMMSLTIWLPIYDRIIVPLLQKFTKKEGGITVLQRMGIGMFLSVLCAMVSGFSEERRRTMALSNPIGIYPRKGEISSMSALWFIPQLALAGLSEAFTLVGQVEFFYKQFPENMKSLAGSLFFCGLAGSSYLSTLLISIIHKVTANSATGNWLPQNLNKGRLDYFYYVIAALEVFNLGYFILCANWYKYKGAATTTSSDLELDQVSKPSETTHNTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEG6</accession>
    <name>V7CEG6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Lon N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G002900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEG6"/>
    <dbReference type="STRING" id="3885.V7CEG6"/>
    <dbReference type="Gramene" id="ESW28602">
        <property type="protein sequence ID" value="ESW28602"/>
        <property type="gene ID" value="PHAVU_002G002900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2411602at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19500">
        <property type="entry name" value="RecA-like_Lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.5270:FF:000002">
        <property type="entry name" value="Lon protease homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1480:FF:000005">
        <property type="entry name" value="Lon protease homolog 2, peroxisomal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000651">
        <property type="entry name" value="Lon protease homolog 2, peroxisomal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.5270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="entry name" value="LON domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004815">
        <property type="entry name" value="Lon_bac/euk-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054594">
        <property type="entry name" value="Lon_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00763">
        <property type="entry name" value="lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10046">
        <property type="entry name" value="ATP DEPENDENT LON PROTEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22667">
        <property type="entry name" value="Lon_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001174">
        <property type="entry name" value="Lon_proteas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="9">
        <location>
            <begin position="11"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="73"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="85"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="409"/>
            <end position="416"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW28602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="722" mass="80498" checksum="A9DA93A0C9813BE2" modified="2014-02-19" version="1">MAESIELPSRLAILPFRNKVLLPGAIIRIYCTSPTSVKLVEQELWQREDKGLIGILPVRDAAQLKTAAPVVPHGVGTDSLDKSSKVQGGSPNSHELDANSQHDVVHWHKRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSMRGTYHTARISSLEMTRTEMEQVEQDPDFIMLSRQFKATATELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDDDDDEDDLAALERKMQSAGMPQNVWKHVQRELRRLKKMQPQQPGYNSSRAYLDLLADLPWQKTSKELELDLKAAQERLDNDHYGLVKVKQRIIEYLAVRKLKPDARGPILCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAHPIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHGLSSEFLQIPEGMVELVIQRYTREAGVRNLERSLASLARAAAVRVAEQDHVVPLSKGVEGLSTPLLESKLADAAEVELEVIPMGVNNRDISNTFRIISPLVVDEAMLEKVLGVTAWQICVFAFEVSNIIPPLKRKTNMGLNYIEIFVCPSATGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGA2</accession>
    <name>V7CGA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FYR C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G282800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGA2"/>
    <dbReference type="STRING" id="3885.V7CGA2"/>
    <dbReference type="Gramene" id="ESW28388">
        <property type="protein sequence ID" value="ESW28388"/>
        <property type="gene ID" value="PHAVU_003G282800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSEX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKSMMTF"/>
    <dbReference type="OrthoDB" id="1928087at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140993">
        <property type="term" value="F:histone modifying activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051726">
        <property type="term" value="P:regulation of cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040092">
        <property type="entry name" value="TBRG1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715:SF1">
        <property type="entry name" value="DNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22715">
        <property type="entry name" value="TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="632"/>
            <end position="665"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="635"/>
            <end position="652"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1211" mass="133198" checksum="59095806C3D16B36" modified="2014-02-19" version="1">MAKTRRAEKAAGAEAEDGGDGLEIISIGSLYKGAWDKKYWTTTRGKDRYPYPVGYQAVRAYNGTTYKMEICEGVNGPKFLISCDDGSSSSGKTPDQPWEEFQKKSCPRIKIWHGKRLSSKMDGLEFFGFKNQSIQRLLRELVTNVNGIAERSLVSPNICEGVARTDHDDNCCPNVGTYPDLLRYLGKQHVTGKRSRCELKNKKLNVRARPQSPQFVCSGPSNVKNEKNHGQGSSTTHYGSEVHEVQNQIGVPAPLQRASSVCKSKNCISSKNDFLLNPLEISDNKEVGAVPSKGSAGFLFSQSCSAKELTENLSTEEPSLHRSQNVELKMSNLLVTSEDNKLMQSHSKETVGCIAIDLCAPDTLDFVQEYTPDSAPSELDENAYIETTCEITSEKLSNAEHEKLVKSNSNPCSEKGDFGSAGLDVANSMMSLLLPQAVPLLRSVSTDKELIISPADMPPSQVNSEDEHNKVGCSLDVASSDVIMIEAAHGEQGETIHGHTDPHSNTLNSEHMKCIVPDSFEYNVIMIEAAHGERETIHGHTDPHSNTLNSEHMKCIVPDSFEYSECDDYKTNQEKLSSDLAEAGRSSFNIEMGSQQLLGHDMPNITSKTHASGIDFEDSPRNFDVCIPESVLDDMSPKDQVNSERRDDDYSGVKENPAHVSLSPAQKDFPTAQDFTGGVSNAFSGDKFKLVTTQMYTTKDTLHSSEIILISNSNDKPCEPDDAAGLCVQTPQTCRDVLIEHSNIVEQSLAPSQNPTQFAEENKCFGTKEAQLISEPMPLQNEELKSNLGSSVKFVGCYLHPMPVSSLFLSTKEDEVHICVLCGHLTDQYRTLFTYKVAITEPTLGYPSVMAHSSILLPDPKHNFIKETMVERSGVQLTPGGQYIVLIGSIKAPNCREGKIDCSCSTCTSVFYEKNALKIVQVEHGYVSVVTTLETADNVHCILVCEPNRLVSVGESGKLEVWVMNSKWSEKTEHFIIPTDDGSASPGIVELKKVPKSTHLVVGHNSYGEFSLWDIAKCNCVARFSAIKSPINEFFPISLFQWQTKGSGFSYASMEEQADKLLKATNSWYSQQRETSWPSPLEENVAMWLFVSTYSDQDCCHNPTSTSSSFDIHTARSWRLALMMKNSINFGSPLNLRTCGIGVSSGYGIIGTTEGVVYMWELSKGSKLYTLHQFQDGNVACVATDNSRGALGVAGGGQLLLYLHIPELDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHA2</accession>
    <name>V7CHA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Formin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G011800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the formin-like family. Class-I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHA2"/>
    <dbReference type="SMR" id="V7CHA2"/>
    <dbReference type="STRING" id="3885.V7CHA2"/>
    <dbReference type="Gramene" id="ESW28718">
        <property type="protein sequence ID" value="ESW28718"/>
        <property type="gene ID" value="PHAVU_002G011800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1922">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKHRVKH"/>
    <dbReference type="OrthoDB" id="1668162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045010">
        <property type="term" value="P:actin nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027643">
        <property type="entry name" value="Formin-like_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213:SF348">
        <property type="entry name" value="FORMIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213">
        <property type="entry name" value="FORMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02181">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00498">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755697" description="Formin-like protein" evidence="5">
        <location>
            <begin position="24"/>
            <end position="883"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="FH2" evidence="6">
        <location>
            <begin position="436"/>
            <end position="857"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="50"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="147"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="861"/>
            <end position="883"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="55"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="156"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="193"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="222"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="323"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="352"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="369"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="391"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="432"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="883" mass="96834" checksum="34772ADCAF8511BC" modified="2014-02-19" version="1">MKALHLSFFHNLLLTLFLSLSIAVNTAKGGVKSSTSADEFGTRRILHQPLFPESSAPPPPLPVETPPSPEGGNIPFFHENPAGAPPDQSQAAPSTSNSSIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVPGRGNNNSNNNIPNRNEVDSTAPPSSFLYIGTVEPTRASTNDSRDNRDVNKANRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSDSDEESRGTVFHSPQNSSVDGYYTPASRQSSLVNGSPAKRDANSTPTPVVPFSKRTSPKSRVSAPSPEIRHVIIPSIKQPPPPSPPPPKHSRKPKFSAPPPPPNLKHLQSTTDTVSHVSKTSLNPPPPPPPPPPPPPPPPPQPRKSVSPAVSASSNSASVKRQSWSPVECSVMKSSEEVEQSVSSSERLETNDKDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPSRKSVLPSVDKENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKTYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEINYLRKSFQTMEAASDELKNSRLFLKLIEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAEPANENVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVHGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLSILDLVCKEVEKMHDKIVGGSGRSFRIPPNASLPVLNRYNHPKQDRSSDEESSSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI38</accession>
    <name>V7CI38_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G098400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CI38"/>
    <dbReference type="SMR" id="V7CI38"/>
    <dbReference type="Gramene" id="ESW29779">
        <property type="protein sequence ID" value="ESW29779"/>
        <property type="gene ID" value="PHAVU_002G098400g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1431999at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="80" mass="8842" checksum="59CDD0506E2C7439" modified="2014-02-19" version="1">MSSNPGPWSFICDFNVVLGSQEHRGSNFVARLPVKEFGAWIDGNHLHYFPTIGSLYTWTNGRLGSARIDKRLDGAGCISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIP9</accession>
    <name>V7CIP9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Complex 1 LYR protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G053100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I LYR family. LYRM9 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIP9"/>
    <dbReference type="SMR" id="V7CIP9"/>
    <dbReference type="STRING" id="3885.V7CIP9"/>
    <dbReference type="Gramene" id="ESW29218">
        <property type="protein sequence ID" value="ESW29218"/>
        <property type="gene ID" value="PHAVU_002G053100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S44B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SLWVLHK"/>
    <dbReference type="OrthoDB" id="190541at2759"/>
    <dbReference type="PhylomeDB" id="V7CIP9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd20269">
        <property type="entry name" value="Complex1_LYR_LYRM9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008011">
        <property type="entry name" value="Complex1_LYR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045291">
        <property type="entry name" value="Complex1_LYR_LYRM9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36758">
        <property type="entry name" value="OS01G0342800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36758:SF1">
        <property type="entry name" value="OS01G0342800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05347">
        <property type="entry name" value="Complex1_LYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Complex 1 LYR protein" evidence="2">
        <location>
            <begin position="7"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="79" mass="9344" checksum="9A9E9BFF020353AB" modified="2014-02-19" version="1">MEKAARAYAEVLRLVRLLPKDTRAYYAKHARENFVNYRETDPSEVSYLFQRTYDHSLWVLHKYSIDKSVADKLKGICCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKF3</accession>
    <name>V7CKF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G168500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKF3"/>
    <dbReference type="STRING" id="3885.V7CKF3"/>
    <dbReference type="Gramene" id="ESW30619">
        <property type="protein sequence ID" value="ESW30619"/>
        <property type="gene ID" value="PHAVU_002G168500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW30620">
        <property type="protein sequence ID" value="ESW30620"/>
        <property type="gene ID" value="PHAVU_002G168500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTWRASD"/>
    <dbReference type="OrthoDB" id="9451254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46869">
        <property type="entry name" value="C2H2-LIKE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46869:SF1">
        <property type="entry name" value="C2H2-LIKE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="95"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="405"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="139"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="358"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="151"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="161"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="171"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="358"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="389"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW30619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="460" mass="51084" checksum="7E768C76F7467639" modified="2014-02-19" version="1">MEERKYVCKYCSKRFPCGKSLGGHIRTHMTEERSNADADMFIKSDGVKKKRDLWCEDVVGNPIYGLRENPKKTMRFVHSGGGAAAAGANYEKEERFCKECGKGFPSLKALCGHMACHSDKEKRTIKFEDSDKKLKLVMDSQSDTETCAPSHPRRSKRTRVKTINLSNHPFSSSSPSSSSVVPLANGSSPVSEVEQEQEEVARCLMLLSRDSSFKGRFASVTEFSDNNSVILEAKSSSPDTRLGVSNGSRYFKHGPKAKMVDSDVSNDEFKWPKVGDKSSKYTATLVKKLAMEDLDYDRTDGTARKFDSRKRSNYDSLYHNPVGGSSKIANGFGNEVCGNGTKGWKYELEGERDYDSYDSIEESHENSSETESYPAPRSHNSKALNGKKSTSKAKKKLKSKKSRDHECPICYKIFRSGQALGGHKRSHFIGGSEENTLVIKQAAPVVPCLIDLNLPAPVDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMU1</accession>
    <name>V7CMU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G134100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMU1"/>
    <dbReference type="SMR" id="V7CMU1"/>
    <dbReference type="Gramene" id="ESW30211">
        <property type="protein sequence ID" value="ESW30211"/>
        <property type="gene ID" value="PHAVU_002G134100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHCALLR"/>
    <dbReference type="OrthoDB" id="736572at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001370">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000184">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF400">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="95"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="165"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="298"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="513"/>
            <end position="605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="605" mass="68241" checksum="4F10FB4C51FE1AD3" modified="2014-02-19" version="1">MSGTSVLCQSHLLSLPNNPPQNSELNAKFNEQGWLSLLKRCKSMEEFKQVHAQILKLGLFLDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNNMNLEKALLLYVEMLEKGIEHDNFTYPFVLKACSLLGALKEGVQIHGQVFKAGLEDDTFVQNGLISMYGKCGEINHACALFEQMDEKSVASWSSIIGAHARVELWQDCLMLLGDMSSEGRHRAEESILVTALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQSMAVKNRYSYTVMISGLAFHGRGREALRVFSEMVEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNSMQLVHKIKPTIQHYGCMVDLMGRAGMLKEACDLIKGMQIKPNDVIWRSLLSACKVHLNLEIGEVAAENVFKLNQHNPGDYLVLASMYARAQKWTDVARIRTEMAEKHLVQTPGFSLVEANRKVHKFVSQDKSQPQCDTIYDMIHQMEWQLKFEGYAPDTSQVLLDVDEEEKRQRLKYHSQKLAIAFALIQTSEGSPVRISRNLRMCSDCHTYTKFISMIYEREISVRDRNRFHHFKDGTCSCKDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQ83</accession>
    <name>V7CQ83_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Sulfite exporter TauE/SafE family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G244800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQ83"/>
    <dbReference type="Gramene" id="ESW31518">
        <property type="protein sequence ID" value="ESW31518"/>
        <property type="gene ID" value="PHAVU_002G244800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWNB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEIFNDW"/>
    <dbReference type="OrthoDB" id="434519at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031464">
        <property type="term" value="C:Cul4A-RING E3 ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14255">
        <property type="entry name" value="CEREBLON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14255:SF48">
        <property type="entry name" value="SULFITE EXPORTER TAUE_SAFE FAMILY PROTEIN 3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755973" description="Sulfite exporter TauE/SafE family protein" evidence="7">
        <location>
            <begin position="32"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="246"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="314"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="355"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="385"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="416"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="462" mass="50463" checksum="E93ED8EF6AA48B48" modified="2014-02-19" version="1">MGVHDVSQRWDVKWVAGKVLIVVLLLVTVSAENTTSESNHTIGVDTNLNYPHTWPSIKFGWKIIVGSMVGFLGSAFGNVGGVGGGGIFVPMLTLIIGFDTKSAIAISKCMITGGATATVFYNLIQRHPTLDLPVIDYDLALLFTPMLMLGISIGVAFNVIFPEWMLTVLLIILFVGISIKSFFKGVETWKKETIMKKEAKKNSRIDDIATPKDAAHYIQTEEPAKEDTKEPRKKVSIVENIRWKELGYLFAIWIMILALEIGKNYATTCSEAYWALNLIQVPIAVGMSSYQAVRLYKGQRVIASKGDQQTHWRVWQLILFCGCGTLAGTIAGLLGLGGGFILAPLFLGIGIPPQVASATSILAMAFSASMAAVEYYLLKRFPVRYALYLVAVATAASLVGQHLVRKMVAVLGRASVIIFILTFTLSVSAVLLGGVGVSHMIQKIEHKEYMGFGNLCMYKVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT99</accession>
    <name>V7CT99_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rab-GAP TBC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G062700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT99"/>
    <dbReference type="SMR" id="V7CT99"/>
    <dbReference type="STRING" id="3885.V7CT99"/>
    <dbReference type="Gramene" id="ESW33354">
        <property type="protein sequence ID" value="ESW33354"/>
        <property type="gene ID" value="PHAVU_001G062700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10264062at2759"/>
    <dbReference type="PhylomeDB" id="V7CT99"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.80:FF:000014">
        <property type="entry name" value="GTPase-activating protein gyp7 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.270:FF:000022">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.270">
        <property type="entry name" value="putative rabgap domain of human tbc1 domain family member 14 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.80">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000195">
        <property type="entry name" value="Rab-GAP-TBC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035969">
        <property type="entry name" value="Rab-GAP_TBC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22957:SF507">
        <property type="entry name" value="OS08G0547200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22957">
        <property type="entry name" value="TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00566">
        <property type="entry name" value="RabGAP-TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00164">
        <property type="entry name" value="TBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47923">
        <property type="entry name" value="Ypt/Rab-GAP domain of gyp1p"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50086">
        <property type="entry name" value="TBC_RABGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rab-GAP TBC" evidence="3">
        <location>
            <begin position="113"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="178"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="143"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="8"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="183"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="204"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="267"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="62834" checksum="0093A30D8F1691A4" modified="2014-02-19" version="1">MNPRGRSHNPSSNSSPPSSPSSNSISNSNSSSSSSSSSTSSSWTPLRSVLFIVTSSSPASSRSSFNRGRLKSPWSQRKRKHALSSQQWKCLFTEDGKFCDGGNKFLKRVRSGGVDPSIRAEVWPFLLGVYDLGSSKDERDVIRTQNRKQYEKLRRQCRKLIKQINERNKLNEVGEISFEGDGKSLSPDSGSSSSDDAASARESLSSEDRSPDVEHSDNLSRALLEGEDVPNANNADASTLDTDFSDSDSSEGPEVIQAVPSDDVQEHNNPNEASQEVSSPTKAKIPSKAPTNEDFSTWQRIIRLDAVRANAEWMSCYPSHPSLSDSRARRTAEAVGLKDYGHLEAGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSSWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMSGHLDVWKLLDDAHNLVVILHDKVETSFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTM4</accession>
    <name>V7CTM4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 19">Peroxidase</fullName>
            <ecNumber evidence="4 19">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_001G011300g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="16 19">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="16 19">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="19">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 19"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTM4"/>
    <dbReference type="STRING" id="3885.V7CTM4"/>
    <dbReference type="Gramene" id="ESW32713">
        <property type="protein sequence ID" value="ESW32713"/>
        <property type="gene ID" value="PHAVU_001G011300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RH3E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TYYNGLK"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048658">
        <property type="term" value="P:anther wall tapetum development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF164">
        <property type="entry name" value="PEROXIDASE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16 19" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 18" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 19" id="KW-0349">Heme</keyword>
    <keyword evidence="13 19" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 16 19" id="KW-0408">Iron</keyword>
    <keyword evidence="7 16 19" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 19" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 19" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="19" id="KW-0964">Secreted</keyword>
    <keyword evidence="19" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149121" description="Peroxidase" evidence="19">
        <location>
            <begin position="24"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="41"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="14">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="16">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="17">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="51"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="84"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="137"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="216"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW32713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="343" mass="38132" checksum="C17B240AC7C9DF44" modified="2014-02-19" version="1">MTFIKVTLLVIIIAFFSVKLSWGHPGFHFGWGDHHGGISFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSTRIVSEKNSGPNKNSVRGFEVIDEIKSRLEEACPQTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIESLITFFKRQGLDEADLVALSGAHTIGVARCATFKQRLYNQKGNNQPDENLEKSFYFDLKTMCPKSGGDNFISPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLVGNAKETRRLVKKYAQDESLFFEQFSMSMIKMGNLRPLTGFNGEVRKNCRILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUT4</accession>
    <name>V7CUT4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G110800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUT4"/>
    <dbReference type="SMR" id="V7CUT4"/>
    <dbReference type="STRING" id="3885.V7CUT4"/>
    <dbReference type="Gramene" id="ESW33937">
        <property type="protein sequence ID" value="ESW33937"/>
        <property type="gene ID" value="PHAVU_001G110800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0715">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRVYRWA"/>
    <dbReference type="OrthoDB" id="376357at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000227">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096:SF58">
        <property type="entry name" value="CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="57"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="33492" checksum="2446E780533FC8C0" modified="2014-02-19" version="1">MQSHLVVGSISVGRYGGAADSSPFHSAAPSCWANPPRRRSPLVVASSSPAAVNGGHNHYAVLGVARTATAVEIKRAYRLLARKYHPDVSRDPHAAELFKSIHHAYEVLSNEATRVQYDQELQFSQNSPREKWSYSTEFEDQVRVYRWAQRRKRMHSERYGEDYNVNEEYSSETEEEEGEERGSFIEVLRSAFLSLFLFQTFGSRLSLTFSGLTALFDEKLDTGYKIGHVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALIVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWT1</accession>
    <name>V7CWT1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidase C14 caspase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G101400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C14B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWT1"/>
    <dbReference type="SMR" id="V7CWT1"/>
    <dbReference type="STRING" id="3885.V7CWT1"/>
    <dbReference type="Gramene" id="ESW33823">
        <property type="protein sequence ID" value="ESW33823"/>
        <property type="gene ID" value="PHAVU_001G101400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1546">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDSQHIE"/>
    <dbReference type="OrthoDB" id="3223806at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029030">
        <property type="entry name" value="Caspase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050452">
        <property type="entry name" value="Metacaspase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011600">
        <property type="entry name" value="Pept_C14_caspase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48104">
        <property type="entry name" value="METACASPASE-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48104:SF7">
        <property type="entry name" value="METACASPASE-9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00656">
        <property type="entry name" value="Peptidase_C14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52129">
        <property type="entry name" value="Caspase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase C14 caspase" evidence="3">
        <location>
            <begin position="6"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="150"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="156"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="317" mass="34300" checksum="BBDAE38A245A325E" modified="2014-02-19" version="1">MEGQKKRLAVLVGCNYPNTGNELHGCINDVLAMKETLVKRFGFDDNDIEVLTDAPNSCKLPTGANIKQALAKLVDGSEAGDVLYFHYSGHGTRIPSKKHGHHFHHEEAIVPCDFNLITDLDFRQLVNRLAKGASLTILSDSCHSGGLIDKEKEQVGPSSSLQKGPISKTTNTLTHKTIPYDSILHHLSSQTKATTTDIGTHMLELFGSDASLRFQTVSHALLEALGPDEGILLSGCQADETSADMNPGAGGGKAYGAFSNAVEMVLREKEGGLSNREVVVRARKVLQGQGFEQHPCLYCSDENADATFLCQPQKTEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXK8</accession>
    <name>V7CXK8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G085600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXK8"/>
    <dbReference type="SMR" id="V7CXK8"/>
    <dbReference type="STRING" id="3885.V7CXK8"/>
    <dbReference type="Gramene" id="ESW33626">
        <property type="protein sequence ID" value="ESW33626"/>
        <property type="gene ID" value="PHAVU_001G085600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TWHAWQK"/>
    <dbReference type="OrthoDB" id="294295at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43180">
        <property type="entry name" value="3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43180:SF55">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="32039" checksum="6D4FF2AA16102DB2" modified="2014-02-19" version="1">MLRTLTRVFKHTNLANDLLQKRSRFYATMVGGRRLEGKVALITGSASGLGKATAHHFVHHGAQVIIADNDTILGPQVAKELGPSARYVECDVAVEAQVAEAVNVAMTHYGKLDIMYNNAGIPGPSFPPSIADLDLDEFDKVMRINIRGMIAGIKHAARVMIPMGSGSILCTSSISGVMGGLGPHPYTISKFAIPGVVKSVASELCKAGVRINCISPAPIPTPMVLAQMQNFYPGLTQEQLEGIVTGFVGLEGAKCEDIDVARAALYLASDEAKFISGHNLIVDGGFTSFKSFSFPSSYQTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYH8</accession>
    <name>V7CYH8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G144500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYH8"/>
    <dbReference type="Gramene" id="ESW34345">
        <property type="protein sequence ID" value="ESW34345"/>
        <property type="gene ID" value="PHAVU_001G144500g"/>
    </dbReference>
    <dbReference type="OMA" id="VWRENPP"/>
    <dbReference type="OrthoDB" id="10404211at2759"/>
    <dbReference type="PhylomeDB" id="V7CYH8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="150" mass="17111" checksum="B409FB31B013C4F0" modified="2014-02-19" version="1">MNNEEVVDNRNEAASEWRMVSAVRPLIKPREENTDTSHKGKNLATPSQLLKSNRTFDRVVNSPPKYNNLSTRVVPSAPQNHLRYRPYDLMQQPLRTVNFLAQMEARSLVPIKVWRENPPSKATLAEWGSTLQLGDGKRKPLDLTLRLGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYZ2</accession>
    <name>V7CYZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA-directed RNA polymerase III subunit RPC9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G230900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPC9 RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYZ2"/>
    <dbReference type="SMR" id="V7CYZ2"/>
    <dbReference type="STRING" id="3885.V7CYZ2"/>
    <dbReference type="Gramene" id="ESW35387">
        <property type="protein sequence ID" value="ESW35387"/>
        <property type="gene ID" value="PHAVU_001G230900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4168">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMIINLR"/>
    <dbReference type="OrthoDB" id="1746530at2759"/>
    <dbReference type="PhylomeDB" id="V7CYZ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005666">
        <property type="term" value="C:RNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006384">
        <property type="term" value="P:transcription initiation at RNA polymerase III promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.40:FF:000008">
        <property type="entry name" value="RNA polymerase II, Rpb4, core protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006590">
        <property type="entry name" value="RNA_pol_Rpb4/RPC9_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005574">
        <property type="entry name" value="Rpb4/RPC9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038324">
        <property type="entry name" value="Rpb4/RPC9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038846">
        <property type="entry name" value="RPC9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15561">
        <property type="entry name" value="CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15561:SF0">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03874">
        <property type="entry name" value="RNA_pol_Rpb4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00657">
        <property type="entry name" value="RPOL4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="HRDC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="RNA polymerase Rpb4/RPC9 core" evidence="8">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="117"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="145"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW35387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="17492" checksum="625E9610EBB3F0A1" modified="2014-02-19" version="1">MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVEQSEYKVYDYLVDTAASDQTRESINEFLTCIKRHDLAKAEVLNILNTRPTSEVEIFPIIESCEGRFPDEEVTEIVELVTKTLPPPPEMKQEEITKDDEETATLKNEKEEISEDPMDTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZC2</accession>
    <name>V7CZC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">anthranilate synthase</fullName>
            <ecNumber evidence="4">4.1.3.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G241700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 1/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterotetramer consisting of two non-identical subunits: a beta subunit and a large alpha subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the anthranilate synthase component I family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZC2"/>
    <dbReference type="SMR" id="V7CZC2"/>
    <dbReference type="STRING" id="3885.V7CZC2"/>
    <dbReference type="Gramene" id="ESW35522">
        <property type="protein sequence ID" value="ESW35522"/>
        <property type="gene ID" value="PHAVU_001G241700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1223">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGRMDTS"/>
    <dbReference type="OrthoDB" id="1865897at2759"/>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004049">
        <property type="term" value="F:anthranilate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:L-tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.120.10:FF:000003">
        <property type="entry name" value="Anthranilate synthase component 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.120.10">
        <property type="entry name" value="Anthranilate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005801">
        <property type="entry name" value="ADC_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019999">
        <property type="entry name" value="Anth_synth_I-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006805">
        <property type="entry name" value="Anth_synth_I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005256">
        <property type="entry name" value="Anth_synth_I_PabB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015890">
        <property type="entry name" value="Chorismate_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00564">
        <property type="entry name" value="trpE_most"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11236">
        <property type="entry name" value="AMINOBENZOATE/ANTHRANILATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11236:SF33">
        <property type="entry name" value="ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04715">
        <property type="entry name" value="Anth_synt_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00425">
        <property type="entry name" value="Chorismate_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00095">
        <property type="entry name" value="ANTSNTHASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56322">
        <property type="entry name" value="ADC synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Anthranilate synthase component I N-terminal" evidence="10">
        <location>
            <begin position="78"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="Chorismate-utilising enzyme C-terminal" evidence="9">
        <location>
            <begin position="293"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="581" mass="64918" checksum="3C32771E79F645F2" modified="2014-02-19" version="1">MFSATIPMSLASATSANASLSFSRRLVPPCSRLSPATLTAASLSCAPLTLRCSSHRTKFEEASEKGNLIPLYQCIFSDQLTPVLAYRILLKEDDREAPSFLFESAEPSYHASSVGRYSVVGAHPSMEIVAKENKVTIIDHESGNLTEKFVDDPIMIPKEISEGWKPCLIDELPDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPEDDRNLADIHLGLYENVIVFDHVEKKAYLIHWVRIDRYPSVESAYKDGMERLEKLASKLQTQSPRLAPGFVDLHTHHFGPPLKKSSMTTEAYKEAVLQAKEHIKAGNIFQIVLSQRFERRTFADPFEIYRALRVVNPSPYMAYLQARGCILVASSPEILTRIKKNKIVNRPLAGTTRRGNTREEDARLEAILLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEQLMNIERYSHVMHISSTVTGELQEHLSSWDVLRSALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGYISFFGEMDIALALRTMVFPTGTRYDTMYSYKDLDQRHEWIAYLQSGAGIVADSVPADEHQECQNKAAALARAIDLAESAFVDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZG2</accession>
    <name>V7CZG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G240900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3">Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M67A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZG2"/>
    <dbReference type="SMR" id="V7CZG2"/>
    <dbReference type="STRING" id="3885.V7CZG2"/>
    <dbReference type="Gramene" id="ESW35514">
        <property type="protein sequence ID" value="ESW35514"/>
        <property type="gene ID" value="PHAVU_001G240900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1556">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRESKTC"/>
    <dbReference type="OrthoDB" id="10256771at2759"/>
    <dbReference type="PhylomeDB" id="V7CZG2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005838">
        <property type="term" value="C:proteasome regulatory particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043161">
        <property type="term" value="P:proteasome-mediated ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd08062">
        <property type="entry name" value="MPN_RPN7_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.140.10:FF:000013">
        <property type="entry name" value="26S proteasome non-ATPase regulatory subunit 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.10">
        <property type="entry name" value="Cytidine Deaminase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024969">
        <property type="entry name" value="EIF3F/CSN6-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000555">
        <property type="entry name" value="JAMM/MPN+_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033858">
        <property type="entry name" value="MPN_RPN7_8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10540:SF30">
        <property type="entry name" value="26S PROTEASOME REGULATORY PARTICLE NON-ATPASE SUBUNIT 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10540">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01398">
        <property type="entry name" value="JAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13012">
        <property type="entry name" value="MitMem_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00232">
        <property type="entry name" value="JAB_MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MPN" evidence="4">
        <location>
            <begin position="17"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00064920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="34841" checksum="D65D3A7B19258FE4" modified="2014-02-19" version="1">MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFRGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKSVPVPSAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZW5</accession>
    <name>V7CZW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="4">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G252400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Required for the correct development of pollen.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZW5"/>
    <dbReference type="SMR" id="V7CZW5"/>
    <dbReference type="STRING" id="3885.V7CZW5"/>
    <dbReference type="Gramene" id="ESW35644">
        <property type="protein sequence ID" value="ESW35644"/>
        <property type="gene ID" value="PHAVU_001G252400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35645">
        <property type="protein sequence ID" value="ESW35645"/>
        <property type="gene ID" value="PHAVU_001G252400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1864">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSHNFWL"/>
    <dbReference type="OrthoDB" id="27652at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02663">
        <property type="entry name" value="Peptidase_C19G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000035">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF733">
        <property type="entry name" value="RE52890P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6" id="KW-0519">Myristate</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="13">
        <location>
            <begin position="23"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="132"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="12">
        <location>
            <begin position="146"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00053800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW35644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="41978" checksum="F27B204F78F48339" modified="2014-02-19" version="1">MGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEFYANNKNLADGEENLLSCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAKRKEEETSPPSEKAANGPNNGLPNGAEKKPLKTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSMETLNAEDKFCCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSDTVEDSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESIGSGNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0K5</accession>
    <name>V7D0K5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">PGG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G171700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0K5"/>
    <dbReference type="SMR" id="V7D0K5"/>
    <dbReference type="STRING" id="3885.V7D0K5"/>
    <dbReference type="Gramene" id="ESW34681">
        <property type="protein sequence ID" value="ESW34681"/>
        <property type="gene ID" value="PHAVU_001G171700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMKWDAI"/>
    <dbReference type="OrthoDB" id="194358at2759"/>
    <dbReference type="PhylomeDB" id="V7D0K5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026961">
        <property type="entry name" value="PGG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24186:SF26">
        <property type="entry name" value="ANKYRIN REPEAT PLANT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24186">
        <property type="entry name" value="PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13962">
        <property type="entry name" value="PGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="336"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="387"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="431"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="457"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="84"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="118"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="152"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="186"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="PGG" evidence="10">
        <location>
            <begin position="334"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW34681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="521" mass="57052" checksum="5587C2B4ACE59C91" modified="2014-02-19" version="1">MMEKQLTGIRGDSPLQSAIRAGNLELVREITSQSPEGELKELLSKRNNSCETALYVAAENDHLDIVKELIGYYDIGLAGFKARNGFDAFHIAAKNGHLEILKVLMEFIPESSMTVDLSNTTALHTAAAQGHLEVVNFLLENGSSLITIAKSNGKTVLHSAARNGHVEIVKALLNKEPEIAVRMDKKGQTALHMAVKGQNLELVDDLVKLNSSLANMVDAKGNTALHIATRKGRLLVVQKLLDCREIDKDVINKSGETALDTAERNGRLEISNFLQHRGAQSAKSIKSPNTNTALEPKRTLNDIKSGVHNQLQHTFKTHRRMQGIAKRINKMHTEGLNNAINSNTVVAVLIATVAFAAIFNVPGQYPEQQDKLSPVMSPGEAYIAPDIGFKIFIIFDSTALFISLAVVIVQTSVVVIERKAKRQMMAVINKLMWVSCVLISVAFIAMSFIIVGDHKELAIAATAIGTVIMAATLGTLCYWVIVHRLEASRLRSLRTTMSSRQSMSMSMMSGSENEYKTVYAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0D2</accession>
    <name>A0ACC3P0D2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L008700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967796">
        <property type="protein sequence ID" value="KAK6645808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="17301" checksum="A41CDA31AAA81263" modified="2026-01-28" version="1">MVGFRNRYMVMEVFVNPNRDKVGNDSIIITQFNVSKAVKDSLLENFGECGLASSLGSFQVKYVNSITHVCIIRVSREDYQKVWSAITMVTNIANCPVMFNLLDLSGSIRACKNAALKCEESKFEHYKLMVGDRFSTADSDGMNSCLNKIKVLEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-01-22" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>U5U2I1</accession>
    <name>U5U2I1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Small ribosomal subunit protein eS1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G044200g</name>
    </gene>
    <organism evidence="8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="submission" date="2013-07" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="8">Pod</tissue>
        </source>
    </reference>
    <reference evidence="10" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5">Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the eukaryotic ribosomal protein eS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="KF378770">
        <property type="protein sequence ID" value="AGZ15363.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="U5U2I1"/>
    <dbReference type="SMR" id="U5U2I1"/>
    <dbReference type="STRING" id="3885.U5U2I1"/>
    <dbReference type="Gramene" id="ESW29111">
        <property type="protein sequence ID" value="ESW29111"/>
        <property type="gene ID" value="PHAVU_002G044200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1628">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCEIITR"/>
    <dbReference type="OrthoDB" id="9834376at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03122">
        <property type="entry name" value="Ribosomal_eS1_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001593">
        <property type="entry name" value="Ribosomal_eS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018281">
        <property type="entry name" value="Ribosomal_eS1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027500">
        <property type="entry name" value="Ribosomal_eS1_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11830">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S3A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01015">
        <property type="entry name" value="Ribosomal_S3Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01397">
        <property type="entry name" value="Ribosomal_S3Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01191">
        <property type="entry name" value="RIBOSOMAL_S3AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="2 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="initiator methionine" description="Removed" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AGZ15363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="29688" checksum="72C3F3E17266494F" modified="2014-01-22" version="1">MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHSFKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATACDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVERPAEETVVEGATEVVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADM2</accession>
    <name>V7ADM2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">UMP-CMP kinase</fullName>
            <ecNumber evidence="9">2.7.4.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Deoxycytidylate kinase</fullName>
            <shortName evidence="9">CK</shortName>
            <shortName evidence="9">dCMP kinase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Uridine monophosphate/cytidine monophosphate kinase</fullName>
            <shortName evidence="9">UMP/CMP kinase</shortName>
            <shortName evidence="9">UMP/CMPK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G004800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>CMP + ATP = CDP + ADP</text>
            <dbReference type="Rhea" id="RHEA:11600"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58069"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.14"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>UMP + ATP = UDP + ADP</text>
            <dbReference type="Rhea" id="RHEA:24400"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.14"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>dCMP + ATP = dCDP + ADP</text>
            <dbReference type="Rhea" id="RHEA:25094"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57566"/>
            <dbReference type="ChEBI" id="CHEBI:58593"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 1 Mg(2+) ion per monomer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.14" evidence="9"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADM2"/>
    <dbReference type="SMR" id="V7ADM2"/>
    <dbReference type="STRING" id="3885.V7ADM2"/>
    <dbReference type="Gramene" id="ESW03325">
        <property type="protein sequence ID" value="ESW03325"/>
        <property type="gene ID" value="PHAVU_011G004800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3079">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTQCDRM"/>
    <dbReference type="OrthoDB" id="442176at2759"/>
    <dbReference type="PhylomeDB" id="V7ADM2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036430">
        <property type="term" value="F:CMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036431">
        <property type="term" value="F:dCMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033862">
        <property type="term" value="F:UMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006221">
        <property type="term" value="P:pyrimidine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03172">
        <property type="entry name" value="Adenylate_kinase_UMP_CMP_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006266">
        <property type="entry name" value="UMP_CMP_kinase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01359">
        <property type="entry name" value="UMP_CMP_kin_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6 9" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="62"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>a ribonucleoside 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="109"/>
            <end position="111"/>
        </location>
        <ligand>
            <name>a ribonucleoside 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>a ribonucleoside 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>CMP</name>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>a ribonucleoside 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>a ribonucleoside 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW03325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="26904" checksum="B054B2A579BC551D" modified="2014-02-19" version="1">MWRRAAKSSSFLPLLLQLPKHDASLPQRFTTGFPFHAPFQEKGGISPKQVAPLITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRREMISDSEYGSSILNTISEGKIVPSEVTVKLILREMEASDNQKFLIDGFPRSEENRAAFEQIVGAEPRFVLFFDCPEEEMVKRVLSRNEGRIDDNIDTMRNRLKVFEALNLPVIDYYSKKGKLYRINAVGTVDEIFEQVRPVFEACEQEAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF77</accession>
    <name>V7AF77_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Reticulon-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_011G053200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="14">Steroid biosynthesis; zymosterol biosynthesis; zymosterol from lanosterol: step 4/6.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 15">Endoplasmic reticulum membrane</location>
            <topology evidence="1 15">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 3-beta-HSD family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF77"/>
    <dbReference type="SMR" id="V7AF77"/>
    <dbReference type="STRING" id="3885.V7AF77"/>
    <dbReference type="Gramene" id="ESW03930">
        <property type="protein sequence ID" value="ESW03930"/>
        <property type="gene ID" value="PHAVU_011G053200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1430">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGKFIIG"/>
    <dbReference type="OrthoDB" id="10058185at2759"/>
    <dbReference type="PhylomeDB" id="V7AF77"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016126">
        <property type="term" value="P:sterol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000273">
        <property type="entry name" value="Reticulon-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002225">
        <property type="entry name" value="3Beta_OHSteriod_DH/Estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050177">
        <property type="entry name" value="Lipid_A_modif_metabolic_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003388">
        <property type="entry name" value="Reticulon"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43245">
        <property type="entry name" value="BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43245:SF51">
        <property type="entry name" value="SHORT CHAIN DEHYDROGENASE_REDUCTASE FAMILY 42E, MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01073">
        <property type="entry name" value="3Beta_HSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02453">
        <property type="entry name" value="Reticulon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50845">
        <property type="entry name" value="RETICULON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 15" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0753">Steroid metabolism</keyword>
    <keyword evidence="8" id="KW-0756">Sterol biosynthesis</keyword>
    <keyword evidence="12" id="KW-1207">Sterol metabolism</keyword>
    <keyword evidence="3 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="398"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="510"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="550"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="domain" description="Reticulon" evidence="16">
        <location>
            <begin position="385"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00060653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU363132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW03930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="585" mass="66668" checksum="15DFCC45D21610C3" modified="2014-02-19" version="1">MAVDDRFAHLNPKKCVVLGGRGFLGRSLVLRLLKLGNWIVRIADSAQSLHLHNSESVLAQALSSARASYFHIDLTDKCNIVKVLEGSSVVFFMDVAGVDINDFYTCYKLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAEALILSVNDIDGLLTCSLRPSNVFGPGDTEFVPYFLKLARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNHEPIQFWEFLSLLLEGLEYQRPYVKLPAKLVQCILSVLKWSHEKLGPRYFSYPLLVRYFQLASYTRTFNCTKAHKNIGYSPIVSLEEGVTLTIESFSHLSKHSCLSRCRSSTEQSKADKLLGGGKVADILLWRDEKKSFTYFVVLVLLFYWFFLSGRTFISSAAKLLQLATLLFYGHGFLPSKLFGFKIQMIPLSYFEISNAEVKDSVITTVYLWNKGFQIIRRLAHGEDWSAFFKIAVFLYLLKMFLAKLLTKLIGIGLVFAFMAFFVYEQYESEVDGVVDILFTSLREFMIYLMRISPAFISRLLHYHDNFQQYERPRNVKNMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFU0</accession>
    <name>V7AFU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription repressor</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Ovate family protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G097500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Transcriptional repressor that regulates multiple aspects of plant growth and development.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFU0"/>
    <dbReference type="STRING" id="3885.V7AFU0"/>
    <dbReference type="Gramene" id="ESW04472">
        <property type="protein sequence ID" value="ESW04472"/>
        <property type="gene ID" value="PHAVU_011G097500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1EV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CFLHLNA"/>
    <dbReference type="OrthoDB" id="1928390at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038933">
        <property type="entry name" value="Ovate"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006458">
        <property type="entry name" value="Ovate_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01568">
        <property type="entry name" value="A_thal_3678"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33057:SF138">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR OFP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33057">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR OFP7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04844">
        <property type="entry name" value="Ovate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51754">
        <property type="entry name" value="OVATE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0678">Repressor</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="OVATE" evidence="8">
        <location>
            <begin position="99"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="20"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="25"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="165"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW04472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="187" mass="20784" checksum="3EB26F718906A69F" modified="2014-02-19" version="1">MSSTKKSLLRTVFTANGSCGCSKTKASEVHDPTPKPKTSHSHQNPNNLSSMASSTTSMEPLDEEEFTSTTVSESETFHDPNNTNNVVLKRSPLVDSVAVEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCNHHVIVKAFNAICEEAFPRKVSTTPAASEPSPSWFKRASDRGQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGT8</accession>
    <name>V7AGT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G123600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGT8"/>
    <dbReference type="SMR" id="V7AGT8"/>
    <dbReference type="STRING" id="3885.V7AGT8"/>
    <dbReference type="Gramene" id="ESW04764">
        <property type="protein sequence ID" value="ESW04764"/>
        <property type="gene ID" value="PHAVU_011G123600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0714">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIYESFF"/>
    <dbReference type="OrthoDB" id="550424at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:protein-folding chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.260.20:FF:000002">
        <property type="entry name" value="Dnaj homolog subfamily b member"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000020">
        <property type="entry name" value="DnaJ subfamily B member 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.260.20:FF:000006">
        <property type="entry name" value="DnaJ subfamily B member 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051339">
        <property type="entry name" value="DnaJ_subfamily_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24078">
        <property type="entry name" value="DNAJ HOMOLOG SUBFAMILY C MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24078:SF577">
        <property type="entry name" value="OS05G0562300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="4"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="347" mass="37977" checksum="746669E2479FF224" modified="2014-02-19" version="1">MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKKAIYDQYGEEGLKGQVPPPDAGGAGTTYFSTGDIPGSFRFNPRNADDIFAEFFGFSSPFGGMGGRGGGGGGGGGMRSRFPGGMFGDDMFASFGDGGVHMSQGAPRKAPPIENKLPCTLEEIYRGTTKKMKISREIADASGKTMQVEEILTINVKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHGVFTRDGNDLVVTQKISLAEALTGYTVHVTTLDGRNLTIPISNVIHPSYEEVVPREGMPLPKDPSKKGNLRIKFNIKFPTRLTDEQRAGIKKLLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ24</accession>
    <name>V7AJ24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histone H4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G163600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the histone H4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ24"/>
    <dbReference type="STRING" id="3885.V7AJ24"/>
    <dbReference type="Gramene" id="ESW05235">
        <property type="protein sequence ID" value="ESW05235"/>
        <property type="gene ID" value="PHAVU_011G163600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22912">
        <property type="entry name" value="HFD_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000002">
        <property type="entry name" value="Histone H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035425">
        <property type="entry name" value="CENP-T/H4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001951">
        <property type="entry name" value="Histone_H4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019809">
        <property type="entry name" value="Histone_H4_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10484">
        <property type="entry name" value="HISTONE H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15511">
        <property type="entry name" value="CENP-T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00623">
        <property type="entry name" value="HISTONEH4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00417">
        <property type="entry name" value="H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00047">
        <property type="entry name" value="HISTONE_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 9" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-T/Histone H4 histone fold" evidence="11">
        <location>
            <begin position="47"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="10">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF15511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="106" mass="11766" checksum="AE04CABD66849F18" modified="2014-02-19" version="1" fragment="single">VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKZ6</accession>
    <name>V7AKZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BAHD acyltransferase DCR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G005200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKZ6"/>
    <dbReference type="SMR" id="V7AKZ6"/>
    <dbReference type="STRING" id="3885.V7AKZ6"/>
    <dbReference type="Gramene" id="ESW05935">
        <property type="protein sequence ID" value="ESW05935"/>
        <property type="gene ID" value="PHAVU_010G005200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT4F">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PCFKEFF"/>
    <dbReference type="OrthoDB" id="1862401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051283">
        <property type="entry name" value="Sec_Metabolite_Acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896:SF50">
        <property type="entry name" value="BAHD ACYLTRANSFERASE DCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896">
        <property type="entry name" value="FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52777">
        <property type="entry name" value="CoA-dependent acyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="471" mass="51782" checksum="BCC291A9D829945E" modified="2014-02-19" version="1">MPSSSTTIVSRCLIHPDHKSTLKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFENLILSLKHSLSAALSHFPPIAGRFSTDSQGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPMSVDVHPCFKEFFAYDMMISYAGHHNPLAAVQVTELADAVFVGCTVNHAVTDGTSFWHFFNTFAAITKGSAAKKVLRAPDFTRETVINSPAVLFVPAGGPALTFDANKPIRERVFHFSRESIQKLKLRANANTNELTEVMGKQVNDGWKIVNGNGNANGNGKLNGNERNEISSFQSLSAQLWRAVTRARKFNDPAKTSTFRMAVNFRHRLEPKMDAFYFGNAIQSIPTVATVGDILSRDLCFCADFLHRNVIAHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTQVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMD2</accession>
    <name>V7AMD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">sterol 3beta-glucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.173</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_010G013800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase 28 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.173" evidence="2"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMD2"/>
    <dbReference type="SMR" id="V7AMD2"/>
    <dbReference type="STRING" id="3885.V7AMD2"/>
    <dbReference type="Gramene" id="ESW06028">
        <property type="protein sequence ID" value="ESW06028"/>
        <property type="gene ID" value="PHAVU_010G013800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAQMNTT"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016906">
        <property type="term" value="F:sterol 3-beta-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010154">
        <property type="term" value="P:fruit development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016126">
        <property type="term" value="P:sterol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000009">
        <property type="entry name" value="Sterol 3-beta-glucosyltransferase UGT80A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000030">
        <property type="entry name" value="Sterol 3-beta-glucosyltransferase UGT80A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010610">
        <property type="entry name" value="EryCIII-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050426">
        <property type="entry name" value="Glycosyltransferase_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48050">
        <property type="entry name" value="STEROL 3-BETA-GLUCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48050:SF13">
        <property type="entry name" value="STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06722">
        <property type="entry name" value="EryCIII-like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0753">Steroid metabolism</keyword>
    <keyword evidence="7" id="KW-0756">Sterol biosynthesis</keyword>
    <keyword evidence="9" id="KW-1207">Sterol metabolism</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycosyltransferase family 28 N-terminal" evidence="12">
        <location>
            <begin position="159"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="Erythromycin biosynthesis protein CIII-like C-terminal" evidence="13">
        <location>
            <begin position="459"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="30"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF06722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW06028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="600" mass="66105" checksum="D2B6032CB5DBF50A" modified="2014-02-19" version="1">MADLPEDCRNSSHSSKDPENRKDVEESVHSAANGTESSSASDIPGKALSKVATMPIDISHGDKLESSSSKFRIERSKTERIRHLSPEDAAQIFDNKIPVQEKLKLLNRIATVKDDGTVEFEVPVDVEPETIVAQSKEVNHVVDDSHDATDFHYIPPLNIVMLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKAEAIIANPPAYGHTHVAEALNIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETEIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLGDGDNPIYIGFGSLPVQEPKKMTQVIVDALESTGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLHCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPPPIPVDEFSLPKLVGAIKFMLDPKVKKRAIDLAKAMESEDGVAGAVKAFFKQLPQKKPEADADPQPSSFFSFRRCFGCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMF8</accession>
    <name>V7AMF8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G015900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMF8"/>
    <dbReference type="SMR" id="V7AMF8"/>
    <dbReference type="STRING" id="3885.V7AMF8"/>
    <dbReference type="Gramene" id="ESW06053">
        <property type="protein sequence ID" value="ESW06053"/>
        <property type="gene ID" value="PHAVU_010G015900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDAYESP"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000012">
        <property type="entry name" value="Gibberellin 20 oxidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00682">
        <property type="entry name" value="IPNSYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="6">
        <location>
            <begin position="197"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW06053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="352" mass="41021" checksum="BEA22A065B6F112A" modified="2014-02-19" version="1">MGEVDTAFIQEPLNRAKLCVIEAEEIPVIDLSPITNKAVADSSSIEGLVKEIGFACKEWGFFQVINHGVPQSLRENIEKASRMFFGQSLEEKRKVSRNERNAMGYYDTEHTKNVRDWKEVFDSVAKDPTLVPLTTDENDDRLTHWTNSSPQYPPHFRNIIKEYVEEMEKLSFKLMELIALSLGLEAKRFEEYFMKDQTSFIRFNYYPTCPNPELALGVGPHKDIGALTILAQEEVAGLEVKHKADQEWIRVQLIPNAYIINLGDIVQVWSNDAYESPEHRVVVNSEKERFSIPFFFFPAQETEVKPLEELINDQNPSKYRPYKWGKFLVHRFNTNFKKRKEDNIQIYQFKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMT4</accession>
    <name>V7AMT4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Leucine-rich repeat-containing N-terminal plant-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_010G088600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RLP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMT4"/>
    <dbReference type="SMR" id="V7AMT4"/>
    <dbReference type="Gramene" id="ESW06937">
        <property type="protein sequence ID" value="ESW06937"/>
        <property type="gene ID" value="PHAVU_010G088600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLIHWNQ"/>
    <dbReference type="OrthoDB" id="1394818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000041">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000213">
        <property type="entry name" value="Tyrosine-sulfated glycopeptide receptor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046956">
        <property type="entry name" value="RLP23-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48061">
        <property type="entry name" value="LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48061:SF2">
        <property type="entry name" value="RECEPTOR LIKE PROTEIN 30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="14"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753586" description="Leucine-rich repeat-containing N-terminal plant-type domain-containing protein" evidence="13">
        <location>
            <begin position="19"/>
            <end position="1106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="1041"/>
            <end position="1064"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="14">
        <location>
            <begin position="31"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW06937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1106" mass="123938" checksum="0D556825CD06EAE6" modified="2014-02-19" version="1">MSIILWLFLLPFCLLNLSTNIILVTGHCLAHQQSLLLNLRNNLEFNPTKSKKLIHWNQNDDCCEWIGVTCNRGHVIALDLSQESISRGIDNLSSLFELQYLRSLNLAHNDFHSEIPPEFKKLKNLRHLNLSNAGFEGQIPIEISYLTKLVTLDFSRTVTSKQALKLERPNIEMFVQNFTDIKELHLDGVAISTKGEVWSHALSSLTSMQVLSMSSCNLSGPFDSSLGKLQSLLILQLDHNNLACPVPESLGSLFNLTTLQLSGCGLSGVFPKNIFQIPSLQVLDLSDNPGLRGSLPNFPSQGSLYNFNLSHTNFSGPLPESIDNLKQSSKLDLSNCQFRGTLPGSMSNLTQLVHLDLSYNNFTGPIPSFNRSRALVVLSLNHNHFMGTVPSTHFEGLINLMSIDLGDNSFDGRVPSSLFRLQSLRHLLLYYNKFDGVLDEFPNTFLSLLEMLDLSGNNFEGPIPMSVFQLKRLRLLYLSKNKFNGTTQLDMIGRLHNLSSLDLAHNNLSVDARIDDVSSFPSLKTLWLGSCNLRSFPDFLRNKSSLLYLDLSSNHIEGTIPNWIWKFDKMVILNVSYNFLTDFEGPFQNLTSNLFKLDLHSNSLQGHAPTFLKNAIYLDYSSNKFSSINFADIGSRIPFLYFLSLSNNSFHGIIHESLCNISDLRALDLSHNRFNSLIPICLTRSSNLRLLNLGGNKLNGYISDTFSTSCSLRFLDLSGNLLSGTIPKSLANCQKLQVLNLGNNQLADGFPCFLKSISPLKVVILRSNKLHGHIGCSNNIGNWETLQIVDLASNNFSGTLPSSLLMSWNTLMLDEDGRFGHLYFNLYDDFNPLNFITAIVDLSSDLQIKLSNIIASEPRLIIDHIIIHLFEEGVGVRTYEDSVTIVNKGRQLNLVKILIAFTSLDFSSNNFEGPIPEELMNLTALHALNLSQNAFSGSIPSSLGNLKHLESLDLSKNSFNGEIPIELAKLSFLAVMNLSYNHLSGKIPTGTQIQTFEADSFVGNERLCGPPLTQNCDDGEKKFSPPPSETPDSHTKGLIEWNILSVELGFTFGFGIYMFPLVFFKRWRMWYSNHVENILCKIVPQLDFVYVHSGGQNYRTMRWNPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANN4</accession>
    <name>V7ANN4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G0278000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANN4"/>
    <dbReference type="Gramene" id="ESW06192">
        <property type="protein sequence ID" value="ESW06192"/>
        <property type="gene ID" value="PHAVU_010G0278000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06193">
        <property type="protein sequence ID" value="ESW06193"/>
        <property type="gene ID" value="PHAVU_010G0278000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHEMSHI"/>
    <dbReference type="OrthoDB" id="1936883at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF560">
        <property type="entry name" value="RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="4">
        <location>
            <begin position="1"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="652"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="652" mass="75500" checksum="AE10768295DFD03C" modified="2014-02-19" version="1" fragment="single">MYDVLINFTGEDIQKKFVSHLDSVLSDVGFTTFLHHPNALNPMHIQQPILNLSRVAIVVFTKTYSQSAWCLHQLQQIIEWHETYCRHVLPVYYEIEPSDVRLQMGDFGKAFKETAHQTFSGQQLEHGTSRWSQALTKAANLFGWDESNHRSDAELVDKIVKSLLNLPVLSATKFPVGLQYQVEDLIGTIKSKSTEDFRIAICGQGGCGKTTLAKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVPEFCALLDLWEYHHWFRGGTIIIITTRDEHILRRHQVDYIFRINPMSPNESLELLSWHAFREPKPKEEYHFLAKRVVAYCGGLPLALEVIGSYLYERKKEEWDRVLLRLDNIPQHEMSHILKISFDGLHSQMEKDLFLDVCCFFVGKSRAYVTKILNGCGVDHDSGIRVLIKRKLIKVKENNKFGMHHLLREMGREIIRQISGKGPEEPGKRSRLLPLKMLLTTKDFFDRYPLVVEDTLRLLRFAGNSEYHYTKLRWISLQGFSSEYLPNDFFLHYAIAIDLKYSLLRFVWNEPQVLAWLKVLNLSHSKYLTKTPDISKLPSLEQIILKDCPRLREVHPSIGCLCNLILLNLKDCTSLSNLHRKIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7APW0</accession>
    <name>V7APW0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Stem 28 kDa glycoprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G144600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">May function as somatic storage protein during early seedling development.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the APS1/VSP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APW0"/>
    <dbReference type="SMR" id="V7APW0"/>
    <dbReference type="STRING" id="3885.V7APW0"/>
    <dbReference type="Gramene" id="ESW07619">
        <property type="protein sequence ID" value="ESW07619"/>
        <property type="gene ID" value="PHAVU_010G144600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU6T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EECEGYV"/>
    <dbReference type="OrthoDB" id="59415at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045735">
        <property type="term" value="F:nutrient reservoir activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07535">
        <property type="entry name" value="HAD_VSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005519">
        <property type="entry name" value="Acid_phosphat_B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010028">
        <property type="entry name" value="Acid_phosphatase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014403">
        <property type="entry name" value="APS1/VSP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01675">
        <property type="entry name" value="plant-AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31284">
        <property type="entry name" value="ACID PHOSPHATASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31284:SF19">
        <property type="entry name" value="VEGETATIVE STORAGE PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03767">
        <property type="entry name" value="Acid_phosphat_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002674">
        <property type="entry name" value="VSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3 5" id="KW-0758">Storage protein</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753954" description="Stem 28 kDa glycoprotein" evidence="6">
        <location>
            <begin position="22"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR002674"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW07619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="260" mass="29384" checksum="FBA17CE933708B87" modified="2014-02-19" version="1">MRMKVFVFVLAVSVGAWQCEGSEHGHENQIFPLRMKTGSGGHYIPEVSCQSWRVGVEAHNVVEWKTVPADCEGYVGNYMLGKQYRSDSKTVCHEAFSYAKTLNITSRDIWVFDVDETTLSNLPYYAHHGFGVEPYNATTSDEWVEVGEAPALPESLKLYKKLLSLGIKIVFLTGRPLNQKAVTVTNLKIAGYHKWEKLILKDTSIYHGKTAVTYKSSERKKVEKEGYKIIGNIGDQWSDILGTNTGQRTFKLPDPMYYIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQN7</accession>
    <name>V7AQN7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G007400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQN7"/>
    <dbReference type="SMR" id="V7AQN7"/>
    <dbReference type="STRING" id="3885.V7AQN7"/>
    <dbReference type="Gramene" id="ESW07967">
        <property type="protein sequence ID" value="ESW07967"/>
        <property type="gene ID" value="PHAVU_009G007400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESRSCGT"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052788">
        <property type="entry name" value="RING-type_E3_ligase_ATL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45798:SF97">
        <property type="entry name" value="ALCOHOL-SENSITIVE RING FINGER PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45798">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="97"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="154"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="169"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="185" mass="19690" checksum="00FBF6E0D5A29880" modified="2014-02-19" version="1">MTRPFRYLGESKSSDDSSAVVDSDFVVILAALLCALICVLGLVAVARCGCLRRLRFSSASTPQPPPAAANKGVKKKVLRSLPKLTANAESAVKFADCAICLSEFAAGDEIRVLPQCGHGFHVSCIDGWLRSHSSCPSCRQILVISRCDKCGGIPAPSSSSSAPPPQPESEARFKVREDNGNRFLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQS4</accession>
    <name>V7AQS4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 16">Catalase</fullName>
            <ecNumber evidence="5 16">1.11.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_009G011100g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="17">Catalyzes the degradation of hydrogen peroxide (H(2)O(2)) generated by peroxisomal oxidases to water and oxygen, thereby protecting cells from the toxic effects of hydrogen peroxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13 16">
            <text>2 H2O2 = O2 + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:20309"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="EC" id="1.11.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 15">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16">Belongs to the catalase family.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.6" evidence="5 16"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQS4"/>
    <dbReference type="SMR" id="V7AQS4"/>
    <dbReference type="STRING" id="3885.V7AQS4"/>
    <dbReference type="Gramene" id="ESW08012">
        <property type="protein sequence ID" value="ESW08012"/>
        <property type="gene ID" value="PHAVU_009G011100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0047">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNSYGRW"/>
    <dbReference type="OrthoDB" id="6880011at2759"/>
    <dbReference type="PhylomeDB" id="V7AQS4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004096">
        <property type="term" value="F:catalase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042542">
        <property type="term" value="P:response to hydrogen peroxide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08154">
        <property type="entry name" value="catalase_clade_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.180.10:FF:000002">
        <property type="entry name" value="Catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.180.10">
        <property type="entry name" value="Catalase core domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018028">
        <property type="entry name" value="Catalase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024708">
        <property type="entry name" value="Catalase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024711">
        <property type="entry name" value="Catalase_clade1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011614">
        <property type="entry name" value="Catalase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002226">
        <property type="entry name" value="Catalase_haem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010582">
        <property type="entry name" value="Catalase_immune_responsive"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020835">
        <property type="entry name" value="Catalase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11465">
        <property type="entry name" value="CATALASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11465:SF23">
        <property type="entry name" value="CATALASE-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00199">
        <property type="entry name" value="Catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06628">
        <property type="entry name" value="Catalase-rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038928">
        <property type="entry name" value="Catalase_clade1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00067">
        <property type="entry name" value="CATALASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01060">
        <property type="entry name" value="Catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56634">
        <property type="entry name" value="Heme-dependent catalase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00437">
        <property type="entry name" value="CATALASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00438">
        <property type="entry name" value="CATALASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51402">
        <property type="entry name" value="CATALASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 15 16" id="KW-0349">Heme</keyword>
    <keyword evidence="12 16" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 16" id="KW-0408">Iron</keyword>
    <keyword evidence="8 15 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 16" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="11" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Catalase core" evidence="18">
        <location>
            <begin position="18"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="active site" evidence="14">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="active site" evidence="14">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="348"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00049254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR038928-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR038928-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="SMART" id="SM01060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW08012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="492" mass="56563" checksum="E46FED58083F0DFF" modified="2014-02-19" version="1">MDPYKHRPSSAFNSPFWTTNSGAPVYNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNLPVFFVRDGMKFPDMVHALKPNPKNHIQENWRILDFFSHFPESLHMFSFLFDDLGVPQDYRHMDGFGVNTYTLISKAGKAVYVKFHWKTVSGVKCLLEEEAIKVGGANHSHATQDLHDSIAAGNYPEWKLFIQTIDPAHEDKFDFDPLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDSVRHAESFPIPPAICSGRREKCGIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASA7</accession>
    <name>V7ASA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Dof zinc finger protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G047500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASA7"/>
    <dbReference type="STRING" id="3885.V7ASA7"/>
    <dbReference type="Gramene" id="ESW08459">
        <property type="protein sequence ID" value="ESW08459"/>
        <property type="gene ID" value="PHAVU_009G047500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RS8X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHGKEQQ"/>
    <dbReference type="OrthoDB" id="1927254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045174">
        <property type="entry name" value="Dof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003851">
        <property type="entry name" value="Znf_Dof"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992:SF316">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN DOF1.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN DOF1.4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02701">
        <property type="entry name" value="Zn_ribbon_Dof"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01361">
        <property type="entry name" value="ZF_DOF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50884">
        <property type="entry name" value="ZF_DOF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 9" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 8 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Dof-type" evidence="11">
        <location>
            <begin position="37"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="78"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="252"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="252"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU369094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW08459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="30490" checksum="B86F25564220700D" modified="2014-02-19" version="1">MDTAQWAQGIGVVKPMEGSKPPPMLERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSVPSPASPPTKKLPDLTTPNFPQSASQDPKIHQGQDLNLAYPPAEDYNTVSKFIEVPYSTELDKGSLQNATSSSTPSQLSAMELLKTGIASSRGLNSFMPMYNSTGFPLPDFKPPPGLNFSLEGFENGYGGLQGIQEGPTGARILFPVEDLKQQVPTTNEFDQQNRSQGDSTGYWNGMLGGGSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT28</accession>
    <name>V7AT28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable 6-phosphogluconolactonase</fullName>
            <ecNumber evidence="5">3.1.1.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G049200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12556"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57955"/>
            <dbReference type="ChEBI" id="CHEBI:58759"/>
            <dbReference type="EC" id="3.1.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.31" evidence="5"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT28"/>
    <dbReference type="SMR" id="V7AT28"/>
    <dbReference type="STRING" id="3885.V7AT28"/>
    <dbReference type="Gramene" id="ESW08480">
        <property type="protein sequence ID" value="ESW08480"/>
        <property type="gene ID" value="PHAVU_009G049200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3147">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HTDQCAR"/>
    <dbReference type="OrthoDB" id="432544at2759"/>
    <dbReference type="UniPathway" id="UPA00115"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017057">
        <property type="term" value="F:6-phosphogluconolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01400">
        <property type="entry name" value="6PGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1360:FF:000009">
        <property type="entry name" value="Probable 6-phosphogluconolactonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005900">
        <property type="entry name" value="6-phosphogluconolactonase_DevB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039104">
        <property type="entry name" value="6PGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006148">
        <property type="entry name" value="Glc/Gal-6P_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01198">
        <property type="entry name" value="pgl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11054">
        <property type="entry name" value="6-PHOSPHOGLUCONOLACTONASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11054:SF22">
        <property type="entry name" value="6-PHOSPHOGLUCONOLACTONASE 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01182">
        <property type="entry name" value="Glucosamine_iso"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glucosamine/galactosamine-6-phosphate isomerase" evidence="6">
        <location>
            <begin position="18"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW08480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="256" mass="28061" checksum="8908ACF879203D70" modified="2014-02-19" version="1">MASMPETKKFAIEIFEGEDLLVDSLAKYVVDLSNKFTSKRGAFTVCLSGGSMIEYLRKLLESPYVDSIEWSKWQVFWLDERVVPKTHANSNYKLALDGLLSTVPIPPGNVYAINDTLSAEGAADDYETRLRELVSKGVITLSPTSGFPKFDLILLGMGPDGHVASLFPGHPLVHENKRWVAFIKDSPKPPPERITLTFPVINSCAYAALVVTGKDEADAVHSVLGKSENPVKLPAALVSPEGELKWFLDKDAASKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUH6</accession>
    <name>V7AUH6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G090200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUH6"/>
    <dbReference type="SMR" id="V7AUH6"/>
    <dbReference type="Gramene" id="ESW08975">
        <property type="protein sequence ID" value="ESW08975"/>
        <property type="gene ID" value="PHAVU_009G090200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ47">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EWMRAAM"/>
    <dbReference type="OrthoDB" id="1696863at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35099">
        <property type="entry name" value="OS02G0182700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35099:SF2">
        <property type="entry name" value="OS02G0182700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="192"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="101"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="27440" checksum="3B5778702E88A25C" modified="2014-02-19" version="1">MLNDDWVRAAMTDETFVVEVLLRLKQTVSTESHHRLPLSWGLKQPRSRSRLATAVSRCDAAVSTRCSPTTPLSWSSGASPSATADGYEDSSRQHHAARSKATATSGYTANSASTKRCRRKKTFAELKEEENSLLKERIYLKKEIATINANFEAQGAKNESLKKIKLDIGSNYQKNPSSTSVEPQCMVAGQPHQRIVSPTLTRPTQDDTRSQASESRPNEIESTGERFFLIPDLNMTPSDDVSCTDTLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVD8</accession>
    <name>V7AVD8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA polymerase sigma-70 region 4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G1376000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVD8"/>
    <dbReference type="STRING" id="3885.V7AVD8"/>
    <dbReference type="Gramene" id="ESW09564">
        <property type="protein sequence ID" value="ESW09564"/>
        <property type="gene ID" value="PHAVU_009G1376000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRMD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="47406at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050239">
        <property type="entry name" value="Sigma-70_RNA_pol_init_factors"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30603">
        <property type="entry name" value="RNA POLYMERASE SIGMA FACTOR RPO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30603:SF4">
        <property type="entry name" value="RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC_MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="Sigma3 and sigma4 domains of RNA polymerase sigma factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA polymerase sigma-70 region 4" evidence="2">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="65" mass="7619" checksum="39020C53D40B1E83" modified="2014-02-19" version="1" fragment="single">LDSLKPKESLVIRQRFGLDGKGDRTLGEIARNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVT8</accession>
    <name>V7AVT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">B-like cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G068900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Interacts with the CDC2 protein kinase to form a serine/threonine kinase holoenzyme complex also known as maturation promoting factor (MPF). The cyclin subunit imparts substrate specificity to the complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the cyclin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVT8"/>
    <dbReference type="SMR" id="V7AVT8"/>
    <dbReference type="STRING" id="3885.V7AVT8"/>
    <dbReference type="Gramene" id="ESW08718">
        <property type="protein sequence ID" value="ESW08718"/>
        <property type="gene ID" value="PHAVU_009G068900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0654">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DQYMTPE"/>
    <dbReference type="OrthoDB" id="5590282at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd20506">
        <property type="entry name" value="CYCLIN_AtCycA-like_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000220">
        <property type="entry name" value="Cyclin superfamily protein, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000001">
        <property type="entry name" value="G2/mitotic-specific cyclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048258">
        <property type="entry name" value="Cyclins_cyclin-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00292">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 6" id="KW-0195">Cyclin</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin-like" evidence="7">
        <location>
            <begin position="119"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin C-terminal" evidence="8">
        <location>
            <begin position="212"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin-like" evidence="7">
        <location>
            <begin position="216"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="39463" checksum="DBDC61CFB25F80AB" modified="2014-02-19" version="1">METRAAAKRKANGVVLVQKQHPKRHRVALAELPNLPNLLVPGSQNTTKEKLHGVKNPNVKKPSSTINLSSYPHIDESFVFDIYEYLHEMEMQKKRRPMVDYIEKVQKVVTPTMRAMLVDWLVEVAEEYKLLPDTLHLSVSYIDRVLSVNPVTKSRLQLLGVSSMFIASKYEEIDPPGAEDFCNITDNSYDKAEVVEMEADILKFLKFEMGNPTVNTFLRRFADVASGNQMTPNSQIEFLGCYLAELSLLDYDCLRFLPSIVAASVVFLSRFIISPEVRPWTPSLSECSGYKSTELKECVLILHDLYMLRKAASFKAVRDKYKQQKFKCVASLSSPPYVPNCYFEDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXN9</accession>
    <name>V7AXN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nuclear pore complex protein NUP1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G207200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXN9"/>
    <dbReference type="STRING" id="3885.V7AXN9"/>
    <dbReference type="Gramene" id="ESW10412">
        <property type="protein sequence ID" value="ESW10412"/>
        <property type="gene ID" value="PHAVU_009G207200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVDV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPSACWP"/>
    <dbReference type="OrthoDB" id="653151at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005635">
        <property type="term" value="C:nuclear envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071763">
        <property type="term" value="P:nuclear membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33416">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33416:SF18">
        <property type="entry name" value="NUCLEOPORIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="382"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="26"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="386"/>
            <end position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="711" mass="77413" checksum="83890478BA351508" modified="2014-02-19" version="1">MASEQITASAPEERGAGGKLRKPPQRKPLPSPYARPPETTSHRWISKLVDPALRLIAGGATRLLPSLFSPATPPSPLFCPTSAAEDQDIRETGDSHGDASRKSDIHLLASKSSEMASADDISGKVESSLDMAVSRQHEKVEKSDKNISDIEQMVKGKKFSRDEFDHLVAVINSRVMDLSNVKQGKENTSLTSRKDPEFLAMAHGLPNVSNEQRQEESTGAMWGTSTPFGVSKVQDQIAASPIEIARAYMDSRVSEAGPSSKDMIHVVENTVLHGVDGAIKPYDPSPSKKSSTCWPGAVVRDAYITPQSQRRYGLQNFPRTPYSRTLLTKSKSKFIHIQGENNHVSSTPIFQSRTAMYLQDKSTSGASESGYGSVGPVRRTRHKFGAQSSSRKPAYSSLNGPSQRESSGFVDGFTPVAKSMETIGAGSTNKPLGFPAGVPTVHLHTSLMAKKILDHIDRNIPTPKEKFAELKMAPKWRNSESSIEFSTTFSNEDNDLHKLNDFSPYKYDGLEGKKSTLLIEGKGNYHIDTQLKDSTDKSTEVRKEETLVPDVNAYNSRNPRLGNDDATKMTLPIGGHPYGVNQEKQASTNPASIKPVLPPISIKKPESKWTVASDNGSGFTFPVSTSSSVFSEPPTPSITPLFSAGDQHQLKQGSTELSYSFGSKKSPAVVFCFPSTSNSAVQNEAGDMKFNFGSSKKTNLSFCFEKNAVRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ56</accession>
    <name>V7AZ56_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase type 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G242300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ56"/>
    <dbReference type="SMR" id="V7AZ56"/>
    <dbReference type="Gramene" id="ESW10839">
        <property type="protein sequence ID" value="ESW10839"/>
        <property type="gene ID" value="PHAVU_009G242300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2352">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSAFQTG"/>
    <dbReference type="OrthoDB" id="411785at2759"/>
    <dbReference type="PhylomeDB" id="V7AZ56"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000224">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051419">
        <property type="entry name" value="Lys/N-term_MeTrsfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12176:SF79">
        <property type="entry name" value="METHYLTRANSFERASE TYPE 11 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12176">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransferase type 11" evidence="4">
        <location>
            <begin position="49"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW10839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="236" mass="26687" checksum="8C40EFB07E2F42D1" modified="2014-02-19" version="1">MTSSTQAYGEPWYWDNRYTNEPGPFDWYQKYLTLAPIINLYVPPTHRILVVGCGNSAFSEGMVVDGGYTDVVNVDISSVVIEAMKSKYQDCPQLKYMKMDVRDMSDFESESFGAAIDKGTLDSILCGNKSRENATKMLEEIWRVLKDKGVYVLVTYGAPLYRLHLLRESCSWTIKLHVIEKLASEEKSDQPIWELTKPVPLNDDGSSVEETLGRSPDVHFIYICTKEISANSNTNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ58</accession>
    <name>V7AZ58_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Transcription elongation factor SPT5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G134600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the SPT5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ58"/>
    <dbReference type="SMR" id="V7AZ58"/>
    <dbReference type="STRING" id="3885.V7AZ58"/>
    <dbReference type="Gramene" id="ESW09521">
        <property type="protein sequence ID" value="ESW09521"/>
        <property type="gene ID" value="PHAVU_009G134600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1999">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPVGYMN"/>
    <dbReference type="OrthoDB" id="28901at2759"/>
    <dbReference type="PhylomeDB" id="V7AZ58"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032044">
        <property type="term" value="C:DSIF complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006368">
        <property type="term" value="P:transcription elongation by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06081">
        <property type="entry name" value="KOW_Spt5_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06082">
        <property type="entry name" value="KOW_Spt5_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06083">
        <property type="entry name" value="KOW_Spt5_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06084">
        <property type="entry name" value="KOW_Spt5_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06085">
        <property type="entry name" value="KOW_Spt5_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06086">
        <property type="entry name" value="KOW_Spt5_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09888">
        <property type="entry name" value="NGN_Euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000024">
        <property type="entry name" value="Transcription elongation factor SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000027">
        <property type="entry name" value="Transcription elongation factor SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000028">
        <property type="entry name" value="Transcription elongation factor SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000043">
        <property type="entry name" value="Transcription elongation factor SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.940:FF:000007">
        <property type="entry name" value="Transcription elongation factor SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="entry name" value="NusG, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041973">
        <property type="entry name" value="KOW_Spt5_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041975">
        <property type="entry name" value="KOW_Spt5_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041976">
        <property type="entry name" value="KOW_Spt5_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041977">
        <property type="entry name" value="KOW_Spt5_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041978">
        <property type="entry name" value="KOW_Spt5_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057935">
        <property type="entry name" value="KOW_Spt5_6_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057934">
        <property type="entry name" value="KOW_Spt5_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057936">
        <property type="entry name" value="KOWx_Spt5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005100">
        <property type="entry name" value="NGN-domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039385">
        <property type="entry name" value="NGN_Euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_uL24_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039659">
        <property type="entry name" value="SPT5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022581">
        <property type="entry name" value="Spt5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017071">
        <property type="entry name" value="TF_Spt5_eukaryote"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125">
        <property type="entry name" value="SUPPRESSOR OF TY 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11125:SF7">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23042">
        <property type="entry name" value="KOW1_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23284">
        <property type="entry name" value="KOW2_Spt5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23291">
        <property type="entry name" value="KOW4_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23290">
        <property type="entry name" value="KOW5_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23038">
        <property type="entry name" value="KOW6_SPT51-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23287">
        <property type="entry name" value="KOW7_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23037">
        <property type="entry name" value="KOWx_SPT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03439">
        <property type="entry name" value="Spt5-NGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11942">
        <property type="entry name" value="Spt5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036945">
        <property type="entry name" value="Spt5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00738">
        <property type="entry name" value="NGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0010">Activator</keyword>
    <keyword evidence="9 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0678">Repressor</keyword>
    <keyword evidence="8 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NusG-like N-terminal" evidence="13">
        <location>
            <begin position="174"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="265"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="416"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="468"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="592"/>
            <end position="619"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="697"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="14">
        <location>
            <begin position="977"/>
            <end position="1004"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="648"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="755"/>
            <end position="911"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="8"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="84"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="791"/>
            <end position="801"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="12">
        <location>
            <begin position="899"/>
            <end position="911"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00056652"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR036945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW09521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1030" mass="114504" checksum="8675BDF779614B6A" modified="2014-02-19" version="1">MSHRGIDRDDDDDDYMDDEQVADFEEEEDRRGRGGRKRRRSGFIDDDAEEVDEDEEEEDDDDEDFDARGGRRRQYKKVSASNFFDEEAVVDSDEEEEEEEGEDDFIVEGGADLPEEDDGRRMRNRRMLPHHQEDHEDLEAVARSIQERYGRRLTDYDEETTDVEQQALLPSVRDPKLWMVKCAIGHERETAVCLMQKYINRPSEFQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSISAQNIKPSFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAIIVVKGDLKNLKGKVEKVDEDNVHIRPEMEGLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNMSFGVIIRVESEAFHVLKGIPDRHEVVLVKLREIKCKIDKKISVQDRFKNTVSSKDVVRIVDGSSKGKQGPVEHIYRGVLFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDAYSRFPTLRSPSRIPPSPRRFPRGGPMDSGGRHRGGRGHDGLAGTTVKVRQGPYKGYRGRVIDDKGASVRVELESQMKVVTVDRNHISDNVAITPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTPGTGGMDMMSPVLGGDNEGPWFIPDILVNVHRAGDESVGVIREVLPDGSYKVALGSSGNGETITALPNEMEAVVPRKSDKIKIMGGVLRGATGKLIGVDGTDGIVKVDDTLDVKILDLVLLAKLAQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1D2</accession>
    <name>V7B1D2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Prokaryotic-type class I peptide chain release factors domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G052200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1D2"/>
    <dbReference type="SMR" id="V7B1D2"/>
    <dbReference type="STRING" id="3885.V7B1D2"/>
    <dbReference type="Gramene" id="ESW11697">
        <property type="protein sequence ID" value="ESW11697"/>
        <property type="gene ID" value="PHAVU_008G052200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2726">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVFHPYQ"/>
    <dbReference type="OrthoDB" id="2019491at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1660">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.410">
        <property type="entry name" value="Release factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00094">
        <property type="entry name" value="Rel_fac_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004374">
        <property type="entry name" value="PrfB"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00020">
        <property type="entry name" value="prfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43116:SF3">
        <property type="entry name" value="CLASS I PEPTIDE CHAIN RELEASE FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43116">
        <property type="entry name" value="PEPTIDE CHAIN RELEASE FACTOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="Release factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prokaryotic-type class I peptide chain release factors" evidence="3">
        <location>
            <begin position="325"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW11697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="456" mass="51282" checksum="58EEBF85A69BC97E" modified="2014-02-19" version="1">MEVVSQPLCTILFATCKHSLLIPQKIPNPSKHFPFFSFRSTTLSSSSRFSPPSLLFAAPENQLSVGEGENTDASDWALQDFYSLRRDVEIMLQRVEEIRESSGLQLLEQELANLEEQAADSSFWENRANAQKTLSTLADIKEKIKLLNDFKTQVEDAETIVKLTEEMESIDRGLFDEAANLIKELNKSLDRYELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVIEKSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGYETTDVISVMDGELDPFVKSYLKFKFNMSLSTSVVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B211</accession>
    <name>V7B211_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">Pectate lyase</fullName>
            <ecNumber evidence="5 12">4.2.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G043600g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>Eliminative cleavage of (1-&gt;4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.</text>
            <dbReference type="EC" id="4.2.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="12">Binds 1 Ca(2+) ion. Required for its activity.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 2/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the polysaccharide lyase 1 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.2" evidence="5 12"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B211"/>
    <dbReference type="SMR" id="V7B211"/>
    <dbReference type="STRING" id="3885.V7B211"/>
    <dbReference type="Gramene" id="ESW11595">
        <property type="protein sequence ID" value="ESW11595"/>
        <property type="gene ID" value="PHAVU_008G043600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQE2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLMKPRH"/>
    <dbReference type="OrthoDB" id="1637350at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030570">
        <property type="term" value="F:pectate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018082">
        <property type="entry name" value="AmbAllergen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002022">
        <property type="entry name" value="Pec_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007524">
        <property type="entry name" value="Pec_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045032">
        <property type="entry name" value="PEL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31683:SF184">
        <property type="entry name" value="PECTATE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31683">
        <property type="entry name" value="PECTATE LYASE 18-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04431">
        <property type="entry name" value="Pec_lyase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00544">
        <property type="entry name" value="Pectate_lyase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00807">
        <property type="entry name" value="AMBALLERGEN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00656">
        <property type="entry name" value="Amb_all"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 12" id="KW-0106">Calcium</keyword>
    <keyword evidence="6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="8 12" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148964" description="Pectate lyase" evidence="12">
        <location>
            <begin position="26"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="Pectate lyase" evidence="13">
        <location>
            <begin position="169"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU361123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW11595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="444" mass="49184" checksum="E7C3184979E724CA" modified="2014-02-19" version="1">MVGSSSKVSIIILVAFAITIPCLEGGIGEFDDFLKGQALEAHEIALESYVPDPVNMTDDLNINVHGALTEVFKEESNHTRRELKQKYGGPCLALNPIDRCWRCKKGWAKNRFKLAHCAKGFGRKATGGLEGKMYIVNDPSDDDPINPKPGTLRFGVLQKEPLWIIFARSMIIKLNYELLISSDKTIDGRGANVMIKDGSGLTMQFVNNVIIHGLRLQNIKSTPGGTIRDSWNHVGIRTKADGDAISIFGSSNIWIDHLSLSDCEDGLVDIIQGSTGITISNCHMTKHNDVMLFGASDTFTGDKIMQVTVAFNHFGQGLIQRMPRCRWGFFHVLNNDYTHWLMYAIGGSSAPTILSQGNRFIAPNNNAAKEVTHRDYAEPSVWEKWQWRSENDVFMNGANFVQSGPPLGKLPFNKGFLMKPRHGSQANRLTRFAGALNCKANSPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B232</accession>
    <name>V7B232_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_008G045200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B232"/>
    <dbReference type="SMR" id="V7B232"/>
    <dbReference type="STRING" id="3885.V7B232"/>
    <dbReference type="Gramene" id="ESW11615">
        <property type="protein sequence ID" value="ESW11615"/>
        <property type="gene ID" value="PHAVU_008G045200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVKB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DLSXNQL"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000328">
        <property type="entry name" value="Leucine-rich repeat protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000445">
        <property type="entry name" value="MDIS1-interacting receptor like kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000719">
        <property type="entry name" value="MDIS1-interacting receptor like kinase 2 isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051420">
        <property type="entry name" value="Ser_Thr_Kinases_DiverseReg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005">
        <property type="entry name" value="LEUCINE RICH REPEAT KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005:SF16">
        <property type="entry name" value="MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00365">
        <property type="entry name" value="LRR_SD22"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="443"/>
            <end position="711"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="472"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW11615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="741" mass="82079" checksum="F8F53B8D7715E8D7" modified="2014-02-19" version="1" fragment="single">SASTPSQLQLEANAIINSGWWNLSSLYSHHICSLNRGILCNDAGSVIGITYPCFEGAVQLATLNLSAFKNLESFEVSSCLEGTIPPEIGSLSKLTVIRLFSNALKGEIPFTIGNISKLVVLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPSTIGNLSKLSGLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPFTIGNLFKLSSLDLSHNSLQGEIPFTIGNLFKLIGLDLSHNSLQGEIPTTIRNLTQLWSLEISNNYIEGSIPFELSFLKNLDFVNLSYNKINGTLFLSLSNLMNLQILDISHNLLIGSLKLFSNRDFSILKSLDLSYNNFTGPPLFLNAYNVNLSFNNLKGPIPNGLIPDALKGNKGEKHARLTKISKNGDLFCIWNYDGSIAYEDIITTTEDFDLKYCIGTGAYGSVYRAQLPSGKIVAVKKLHGFEAEVPTFDESFRNEAKVLSEIKHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLFDDIEAMELDWKKRVNTVKGTAHALSYLHHDCVPPIVHRDISTSNVLLNSNWEPTVSDFGTARFLNLDSSNQTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALETLMGKHPKEILSSLQSTSTDDDIKLCEILDQRLPHPTYSILQDIIVIAIVTFACLNPNPCSRPTMKNISHIFLNKPKHLITRSYFEVMKIELYKRVMSYKTQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4Y1</accession>
    <name>V7B4Y1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal protein L34e superfamily protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G036900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4Y1"/>
    <dbReference type="STRING" id="3885.V7B4Y1"/>
    <dbReference type="Gramene" id="ESW11516">
        <property type="protein sequence ID" value="ESW11516"/>
        <property type="gene ID" value="PHAVU_008G036900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RM6V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WVYMFIG"/>
    <dbReference type="OrthoDB" id="1865221at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46996">
        <property type="entry name" value="OS05G0488500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46996:SF4">
        <property type="entry name" value="RIBOSOMAL PROTEIN L34E SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="225" mass="24560" checksum="A4D298ABD31B44FF" modified="2014-02-19" version="1">MVYFHSSISLCNSSLGQPMANSLDFGSKSRHRKTPNSPQASPCRRSRSAVVDVVIFVAVVAAFGFLLFPYAQIVASESVKVGVVIVDLFKEEVSVAPWVYMFIGVSVTFAALTTWVLVACTTRKCGNPKCKGLRKAAEFDIQLETEDCVKNSPSLTKDGAVKTKDGAVKKGFFKLPCDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGPKKNRKIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5Q2</accession>
    <name>V7B5Q2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G170800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5Q2"/>
    <dbReference type="SMR" id="V7B5Q2"/>
    <dbReference type="STRING" id="3885.V7B5Q2"/>
    <dbReference type="Gramene" id="ESW13134">
        <property type="protein sequence ID" value="ESW13134"/>
        <property type="gene ID" value="PHAVU_008G170800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0236">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
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        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
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    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00815">
        <property type="entry name" value="sulP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="SULFATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SpoIIaa-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="285"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="343"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="377"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="417"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="442"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="476"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="8">
        <location>
            <begin position="527"/>
            <end position="650"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW13134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="658" mass="72241" checksum="2FED941257BA4069" modified="2014-02-19" version="1">MSSMGGSADENLETKEMNVRSLSSSNVQEPYVHKVGIPPRQNLFKEFQSTVKETFFADDPLRSFKDQTKSRKLILGIEAIFPILSWGRTYNLTKLRGDLIAGLTIASLCIPQDIGYAKLANLDPEYGLYSSFIPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQSEIDPIANPVDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKTDVVSVMHSVLSSAHHGWNWQTIVIGAVFMAFLLSAKYIGKKNPKFFWVPAIAPLISVVLSTLFVYLTRADKHGVAIVKHIERGINPSSVKEIYFTGDYLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSFTSCYVATGSFSRSAVNYMAGCETAVSNIVMSVVVFLTLEFLTPLFEYTPNAILATIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEEQVKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKRDVQLVLANPGPIVIDKLHTSNFAALLGEDKIFLTVAEAVAYCSPKLAEDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8Q9</accession>
    <name>V7B8Q9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G179500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7B8Q9"/>
    <dbReference type="STRING" id="3885.V7B8Q9"/>
    <dbReference type="Gramene" id="ESW13238">
        <property type="protein sequence ID" value="ESW13238"/>
        <property type="gene ID" value="PHAVU_008G179500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R77Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SCFANGQ"/>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037546">
        <property type="entry name" value="SAC51-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36066">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH145"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36066:SF2">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH145"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23173">
        <property type="entry name" value="bHLH_SAC51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="155"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="218"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="284"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="155"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="194"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="232"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="373" mass="40697" checksum="BF252097D580BDA4" modified="2014-02-19" version="1">MGEDCRTWIPELFFDWQSPNLSSFNAAPFGMGKQNGSSAAMNPVANSVSRDVTMPAYVSSGLPHSQLGHTGEPHGWFYCLPRFRQGFTTPARNFTAEEKLPASHGKGFREEIAPVGASGFPQKQFLVIDRTADQTTLVYSSRFGRPVECLTSWDSKLHGSTNLSNGNESPSLRRDLNNVVGLGPTLDDKVDENQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDEVTSTGHSPSTMTTHDNQEEPRRGTAEEVASSVGETKKRKLWDGAYDDDTQFIDSASSLDGKRPFEVEDDAESSVGNSSRGSGGMGSWSGNKKMRKEKIQDVLSILQCIVPGGKGKDPVVLLDEAIRCLKSLKLKAIELGLDAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7B907</accession>
    <name>V7B907_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA mismatch repair protein MSH5</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">MutS protein homolog 5</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G268900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B907"/>
    <dbReference type="STRING" id="3885.V7B907"/>
    <dbReference type="Gramene" id="ESW14294">
        <property type="protein sequence ID" value="ESW14294"/>
        <property type="gene ID" value="PHAVU_008G268900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0219">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0221">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSVYFMP"/>
    <dbReference type="OrthoDB" id="29596at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000794">
        <property type="term" value="C:condensed nuclear chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043073">
        <property type="term" value="C:germ cell nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051026">
        <property type="term" value="P:chiasma assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010777">
        <property type="term" value="P:meiotic mismatch repair involved in reciprocal meiotic recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd03281">
        <property type="entry name" value="ABC_MSH5_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1420.10:FF:000026">
        <property type="entry name" value="DNA mismatch repair protein MSH5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001067">
        <property type="entry name" value="DNA mismatch repair protein MSH5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011184">
        <property type="entry name" value="DNA_mismatch_repair_Msh2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361:SF20">
        <property type="entry name" value="MUTS PROTEIN HOMOLOG 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005813">
        <property type="entry name" value="MSH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="DNA repair protein MutS, domain III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0469">Meiosis</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="12">
        <location>
            <begin position="642"/>
            <end position="658"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00073549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00077470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS00486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW14294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="808" mass="91617" checksum="8BEB9C0E91B2D4E3" modified="2014-02-19" version="1">MEDMDEIDAVPQVYMACILNGHRIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTSTKSEESFLSDLQQKDGVAESPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLNVKERIYYLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSISIHSVAEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNCISFFLRSEELVASLRETLKSVKDIPHLLKKFDSPSFTCASSDWTALLKSICALLHVNKIFEVGISEGLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEEMPEFLEEVSSLELAELPVLCKDKRVPCIVYIQQIGYLMCIFEEKPEETTLETLVDWEYAFCDTDGETKRYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRILMFHTLLIKVATFAAELDCFLSMALIARQNNYVRPSLTEENLLDIKNGRHVLQEMTVDTFIPNDTNILHDGRINIITGPNFSGKSIYIKQIAIIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSQSLCLVDEFGKGTLTEDGVGLLAGTINHFVTCHEPPKVFLCTHLMDLLHGQSLTKSEQIKFYTMSILRPDDNSTYIDDIVFLYRLVPGHAHHSYGLHCALLAGVPEEIVKRAAAVLDAVSNNNHVERLCNENISAQDRQYKDAMDKLLEFDIEKGDLKLFFEDIFSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9A6</accession>
    <name>V7B9A6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G197000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9A6"/>
    <dbReference type="SMR" id="V7B9A6"/>
    <dbReference type="STRING" id="3885.V7B9A6"/>
    <dbReference type="Gramene" id="ESW13448">
        <property type="protein sequence ID" value="ESW13448"/>
        <property type="gene ID" value="PHAVU_008G197000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTETWAY"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="207"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="278"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="358"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="403"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="429"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="459"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="511" mass="55834" checksum="2FDD6E9E086B7FA3" modified="2014-02-19" version="1">MGSVDFNDTLEHQPLLVRLDSNTQIQNLSSEAIEEFLGDRPIALKWWSKLVLWESRLLWLLSGSSIVVSIFNYMLSFVTLMFTGHLGSLELAGASLASVGIQGLAYGIMLGMASAVQTVCGQAYGAKKLGAMSIILQRAVILHIGAAVILSFLYWFSGDFLKAIGQSDSIADKGQVFSRGLIPQLYAFTISCPMQRFLQAQNIVNPLAYMSVGVFLFHILLTWIVVYVLDYGLLGAALSLSFSWWLLAFLIGLYIIFSPTCKETWTGFSLKAFSGMWPYFKLTVSSAVMLCLEIWYSQGLVLISGLLSNPTISLDSISICMNYLNWDMQFMLGLSTAASIRVSNELGASHPRIAKFSVFVVSGTSILISVIFCSIILIFRVVLSKLFTSDSEVIEAVSHLTPLLAISVFLNGIQPILSGVAIGSGWQAVVAYVNLGSYYFVGLTVGCVLGFKTSLGVDGIWWGMILGVLIQTATLIVLTARTNWQAEVEKAVVRIKRAAENDTLDELVTDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9R5</accession>
    <name>V7B9R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G1752000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9R5"/>
    <dbReference type="STRING" id="3885.V7B9R5"/>
    <dbReference type="Gramene" id="ESW13191">
        <property type="protein sequence ID" value="ESW13191"/>
        <property type="gene ID" value="PHAVU_008G1752000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HQYPYSD"/>
    <dbReference type="OrthoDB" id="547665at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="53"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW13191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="358" mass="40589" checksum="318A216746EB9015" modified="2014-02-19" version="1" fragment="single">SIVFGLLGIMAFKIFRYFREKEEDQARVDKFLEDYKAEKPTRFTYADVKRITDGFKEKLGEGAHGAVFKGKLSNEIVVAVKIINNTEGDGNEFINEVGIMGKIHHIHVVRLLGFCAEGIHRALVYNLFPKGSLQSFIFPPDDKEHFLGWEKMQHIALGIAKGIEYLHQGCNHPIIHFDINPRNVLLDDNFTPKISDFGLAKLCFKNPSLVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSSENIHVLYPDWIHNLVDGDIRIHIEYEGDVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETKEEHQLTVPPNPFHSTTSTLTSARRPLELEAIQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD17</accession>
    <name>V7BD17_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G075100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD17"/>
    <dbReference type="SMR" id="V7BD17"/>
    <dbReference type="STRING" id="3885.V7BD17"/>
    <dbReference type="Gramene" id="ESW15470">
        <property type="protein sequence ID" value="ESW15470"/>
        <property type="gene ID" value="PHAVU_007G075100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HITAYHY"/>
    <dbReference type="OrthoDB" id="1923658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051863">
        <property type="entry name" value="HIPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811">
        <property type="entry name" value="COPPER TRANSPORT PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811:SF77">
        <property type="entry name" value="ION-BINDING PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="7">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="74"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14479" checksum="051AC6A183CAA160" modified="2014-02-19" version="1">MNKVVLKVELPDDKIKKKAMKAVSKISGVESVSLEMKEQKLTLIGDMDAVVVVEKLRKVCYTEIISYGAAKVENKEKKKEEKNQPEKKNNDQTQNIADILKTYENYHNHYHYTSYVEENPNACVIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE01</accession>
    <name>V7BE01_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G008300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE01"/>
    <dbReference type="SMR" id="V7BE01"/>
    <dbReference type="STRING" id="3885.V7BE01"/>
    <dbReference type="Gramene" id="ESW14681">
        <property type="protein sequence ID" value="ESW14681"/>
        <property type="gene ID" value="PHAVU_007G008300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2769">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HASASFE"/>
    <dbReference type="OrthoDB" id="10264544at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046540">
        <property type="term" value="C:U4/U6 x U5 tri-snRNP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd24162">
        <property type="entry name" value="Prp3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013881">
        <property type="entry name" value="Pre-mRNA_splic_Prp3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027104">
        <property type="entry name" value="Prp3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010541">
        <property type="entry name" value="Prp3_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14212">
        <property type="entry name" value="U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14212:SF0">
        <property type="entry name" value="U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08572">
        <property type="entry name" value="PRP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06544">
        <property type="entry name" value="Prp3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor 3" evidence="7">
        <location>
            <begin position="433"/>
            <end position="661"/>
        </location>
    </feature>
    <feature type="domain" description="Small nuclear ribonucleoprotein Prp3 C-terminal" evidence="6">
        <location>
            <begin position="686"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="190"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="267"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="562"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="34"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="47"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="104"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="193"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="227"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="272"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="564"/>
            <end position="577"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW14681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="819" mass="92671" checksum="A9CD57646E6EE0D8" modified="2014-02-19" version="1">MDDRDKSEKRSRDRHSERHRDSDDHRHRDSDDHRHHRSERHHKRDPKSRDRDRDRAYDREGSKERDRDRDRVHERESRSKVKRDEEREESLEPRHSSHSHKRKERELSEERDFEDKKIRVSVEKRERRKFGDKVKKEEQEQKVNGDDKMEGIPEASVKDEVTNGSHASASFEDTASIGALGSPAVTSLAVPETSLTHSSSFPIKVSSNFTTNENKGVSITRSHEVTGKSSTDGPSSTAGKPGSFSIDALAKAKKALQMQKELAEKLKKIPQLNKSSTQDLQGSSKLGSKDESTVPSSMAGFASIFPSTASTFANPLASGTSPTGIANLPNIEAVRRAQELAARLGFHPDPQFAPLINTFPGHMVTDVAIPQKPTKAPVLRLDAQGREIDEHGNVVNVTKPSNLSTLKVNINKQKKDAFEILKPVLDIDPESDPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKDAESIKLKSKFGEAQAKEHRAKQAQLAKAKAAPDINPNLIEITERVIIKEKPKDQIPEIEWWDVPLLHAGNYGDIDNGIIGEDKLKMEKLTFYVEHPRPIEPPAEPAPPPPQPLKLTKHEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKVKISNLMKVLGTEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPNTLETLVSLYKINDLSHPKCRFRVDVNAQENRLTGCAVICDGISVVVVEGGSKSIKRYGKLMLRRINWSDVSKEKEENEDSDDDKTVNKCVLVWQGSVAKHSFNRFSVHDCITEAAGRKVFVDAGVPHYWDLAVNYVEDEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE82</accession>
    <name>V7BE82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G131600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE82"/>
    <dbReference type="SMR" id="V7BE82"/>
    <dbReference type="Gramene" id="ESW16129">
        <property type="protein sequence ID" value="ESW16129"/>
        <property type="gene ID" value="PHAVU_007G131600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYCKSSE"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7BE82"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000566">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002540">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001795">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At1g25360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF541">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="99"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="212"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="243"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="348"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="379"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="480"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="617"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="695"/>
            <end position="787"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW16129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="787" mass="88055" checksum="06B035C470CAE6F7" modified="2014-02-19" version="1">MDVRTMGNRYLAQLTHTSLARAVHAHILTSGFNPFPLIINRLIDHYCKSSNIPYARHLFDKISKPDIVATTTLLSAYSAAGNIKLAHQLFNATPLTIRDTVSYNAMITAFSHSHDGYAALQLFVQMKRLGFVPDPFSFSSVLGALSLIADEERHCQQFHCEVLKRGVLSGPSVLNALMSCYVSCASSPLVDSCLVMAAARKLFDEAPHGLRDEPSWTTIIAGYVRNGDLVAARELLDGMTDHIAVAWNAMISGYVHRGLYEAAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFYIGRQVHAYVLRTVVQPSQHFVLSVNNVLITFYTRCGKLVEAKRVFDKMPVKDLVSWNAILSGYVNARCVEEANSIFREMPERSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQITRLGHDSSLSVGNALITMYARCGLVEAADTVFFTMPYVDSVSWNAMIAALAQHGHGVKAIQLYEQMLKENILPDRITFLTILSACSHAGLVKEGRHYFDTMRAHYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPSAPIWEALLSGCRIHGNTELGIQAAEKLLKLMPQQDGTYISLSNMYATLGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYKYLEHLVHEMRKLGYVPDTKYVLHDMESEQKENALSTHSEKLAVVYGIMKIPLGATIRVFKNLRICGDCHSAFKFISKVVDREIIVRDRKRFHHFRNGECSCGNYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFN8</accession>
    <name>V7BFN8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">G protein gamma domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G175700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFN8"/>
    <dbReference type="SMR" id="V7BFN8"/>
    <dbReference type="STRING" id="3885.V7BFN8"/>
    <dbReference type="Gramene" id="ESW16669">
        <property type="protein sequence ID" value="ESW16669"/>
        <property type="gene ID" value="PHAVU_007G175700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S439">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSTICME"/>
    <dbReference type="OrthoDB" id="1934467at2759"/>
    <dbReference type="PhylomeDB" id="V7BFN8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007186">
        <property type="term" value="P:G protein-coupled receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015898">
        <property type="entry name" value="G-protein_gamma-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045878">
        <property type="entry name" value="GG1/2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35129">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35129:SF1">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00631">
        <property type="entry name" value="G-gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01224">
        <property type="entry name" value="G_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="G protein gamma" evidence="8">
        <location>
            <begin position="33"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="29"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="107" mass="11965" checksum="F1D544E591EC6882" modified="2014-02-19" version="1">MASETASSADEEAVAVSAAGAGGTDKRGRHRILAELKRLDQDSKFLQEELEELEKTENVSTICMDLLQSMESRPDPLLPEVHGPVNLLWDRWFEGPQDPQACRCWIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH79</accession>
    <name>V7BH79_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G192100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH79"/>
    <dbReference type="SMR" id="V7BH79"/>
    <dbReference type="STRING" id="3885.V7BH79"/>
    <dbReference type="Gramene" id="ESW16880">
        <property type="protein sequence ID" value="ESW16880"/>
        <property type="gene ID" value="PHAVU_007G192100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWSH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MACGGYQ"/>
    <dbReference type="OrthoDB" id="730183at2759"/>
    <dbReference type="PhylomeDB" id="V7BH79"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF4">
        <property type="entry name" value="NAC TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="5">
        <location>
            <begin position="10"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW16880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="275" mass="31499" checksum="F92D5CBBF53F0330" modified="2014-02-19" version="1">MGLRDIGASLPPGFRFYPSDEELVLHYLYKKVTNEEVLKGTLMEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPSTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNSQLMYESTVPSLTLASSSPTNQTIGYNQLPHFSSSITTQNNNSFMGLLHFSRETNANSSSITQISPKCDDGYGFLWDMEMEENSFHDGVASNMVDGMRFEVDNNSVVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHK7</accession>
    <name>V7BHK7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Small ribosomal subunit protein mS41 SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G202300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHK7"/>
    <dbReference type="SMR" id="V7BHK7"/>
    <dbReference type="STRING" id="3885.V7BHK7"/>
    <dbReference type="Gramene" id="ESW17005">
        <property type="protein sequence ID" value="ESW17005"/>
        <property type="gene ID" value="PHAVU_007G202300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4H6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRHRTIM"/>
    <dbReference type="OrthoDB" id="18595at2759"/>
    <dbReference type="PhylomeDB" id="V7BHK7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019083">
        <property type="entry name" value="SAM_Ribosomal_mS41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34955">
        <property type="entry name" value="IGR MOTIF PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34955:SF2">
        <property type="entry name" value="IGR MOTIF PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09597">
        <property type="entry name" value="SAM_Ribosomal_mS41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01238">
        <property type="entry name" value="IGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Small ribosomal subunit protein mS41 SAM" evidence="1">
        <location>
            <begin position="47"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="13275" checksum="C7E75A3ACDB35AF8" modified="2014-02-19" version="1">MAMAWLQLQRIITKGGANLISTLPHSTPYSSSRFFSKSSLYVVKVGIPEFLNGIGKGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRVESIKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHV4</accession>
    <name>V7BHV4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Coenzyme F420 hydrogenase/dehydrogenase beta subunit N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G2388001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHV4"/>
    <dbReference type="STRING" id="3885.V7BHV4"/>
    <dbReference type="Gramene" id="ESW17427">
        <property type="protein sequence ID" value="ESW17427"/>
        <property type="gene ID" value="PHAVU_007G2388001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR65">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DDTCISC"/>
    <dbReference type="OrthoDB" id="1712202at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090415">
        <property type="term" value="F:7-hydroxymethyl chlorophyll a reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033354">
        <property type="term" value="P:chlorophyll cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045220">
        <property type="entry name" value="FRHB/FDHB/HCAR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31332">
        <property type="entry name" value="7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31332:SF0">
        <property type="entry name" value="7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="12619" checksum="5387D03D118CAE58" modified="2014-02-19" version="1" fragment="single">MSALSLPIPLTIRSSSSKDTDSSLRKDWRKKSKPIPPGGIYPAKDTCSRCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKTDNLDETYLGVYEELLYARKVLPVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ86</accession>
    <name>V7BJ86_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tower domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G005900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ86"/>
    <dbReference type="STRING" id="3885.V7BJ86"/>
    <dbReference type="Gramene" id="ESW18012">
        <property type="protein sequence ID" value="ESW18012"/>
        <property type="gene ID" value="PHAVU_006G005900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4751">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEISTYY"/>
    <dbReference type="OrthoDB" id="21095at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000282">
        <property type="entry name" value="Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015525">
        <property type="entry name" value="BRCA2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11289:SF0">
        <property type="entry name" value="BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11289">
        <property type="entry name" value="BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81878">
        <property type="entry name" value="BRCA2 tower domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="341" mass="38402" checksum="7F5980D9CA3E0247" modified="2014-02-19" version="1">MDRRSAVVDGIISEYQKERSHINYDSDSEGAKIYNMLETAEEPEFLMADMSPEQLSSFAAYKAKLNAIRQSEKEKSIEKALKDAGLGHREVTPLMKLRVVGLTYKTRQDKPKEGIVTIWNPIEKQLLELVEGGAYAVAGLMPSSSDFDILQLHARGSCTKWLPLSSNAREQFRPFFRRRKSTPLSSLGDIPLSNEFDIAAYVVHVGRVYTSNQQKKQWVFVTDGSIMNGLQSEKLINSLLAICFCSPLIDHDSSFPLFNYNLAGSTVGLCNLIKKEKDHTNHIWVADANENSAYYLNFDSSNCSHLRNAASSIRRWAYNSLLIIEKLKEKVLHVVGDDCKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJZ6</accession>
    <name>V7BJZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_007G233900g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJZ6"/>
    <dbReference type="SMR" id="V7BJZ6"/>
    <dbReference type="STRING" id="3885.V7BJZ6"/>
    <dbReference type="Gramene" id="ESW17370">
        <property type="protein sequence ID" value="ESW17370"/>
        <property type="gene ID" value="PHAVU_007G233900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDADDWN"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="PhylomeDB" id="V7BJZ6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000015">
        <property type="entry name" value="Calcium-dependent protein kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000004">
        <property type="entry name" value="Calcium-dependent protein kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000249">
        <property type="entry name" value="Calcium-dependent protein kinase SK5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="118"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="419"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="455"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="491"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="529"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="27"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="16">
        <location>
            <begin position="33"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="16">
        <location>
            <begin position="66"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="16">
        <location>
            <begin position="84"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW17370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="581" mass="64995" checksum="161A39A07EC922A3" modified="2014-02-19" version="1">MGNTCTGPSISKNGLFQSVSAAIWRSQLPDESVSNRESVKEEATSVPESPLPVQNKPPEQITMPKPEAKQEAKSETEPAQGQEKKKHKKHGSVKRVSSAGLRVDSVLQRETDNFKEFFTLGRKLGQGQFGTTFLCVEKATGNEYACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERQAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVNQLEDSLLKTIDFGLSVFFKPGDIFSDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPNISESAKDLVRKMLVRDPRRRLTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIIIAESLSEEEIAGLKEMFKMIDADNSGQITFEELKAGLKRVGANLNESEIYDLMQAADIDNSGTIDYGEFLAATLHRNKIEREDNLFAAFSYFDKDGSGYITQEELQQACDEFGIKDVRLEEIIKEIDEDNDGRIDYNEFVAMMQKGNLPSVGKKGLENSFSIKFREALKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK53</accession>
    <name>V7BK53_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G237500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK53"/>
    <dbReference type="SMR" id="V7BK53"/>
    <dbReference type="Gramene" id="ESW17413">
        <property type="protein sequence ID" value="ESW17413"/>
        <property type="gene ID" value="PHAVU_007G237500g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1448505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754636" description="Knottin scorpion toxin-like domain-containing protein" evidence="1">
        <location>
            <begin position="29"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="68" mass="7308" checksum="49E1BA80872E2CE6" modified="2014-02-19" version="1">MSGYSVMWMILFKVAATIVLVISSGVRSQRHPPFCHETCNEFGDCAARCKVLGYIGGGKCIGTLCCCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMJ1</accession>
    <name>V7BMJ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CTLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G027500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5">Interacts with RANBPM.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMJ1"/>
    <dbReference type="SMR" id="V7BMJ1"/>
    <dbReference type="STRING" id="3885.V7BMJ1"/>
    <dbReference type="Gramene" id="ESW18275">
        <property type="protein sequence ID" value="ESW18275"/>
        <property type="gene ID" value="PHAVU_006G027500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0293">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSISMWE"/>
    <dbReference type="OrthoDB" id="972532at2759"/>
    <dbReference type="PhylomeDB" id="V7BMJ1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000087">
        <property type="entry name" value="WD repeat-containing protein 26 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006595">
        <property type="entry name" value="CTLH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051350">
        <property type="entry name" value="WD_repeat-ST_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22838:SF25">
        <property type="entry name" value="TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LISH FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22838">
        <property type="entry name" value="WD REPEAT PROTEIN 26-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23627">
        <property type="entry name" value="LisH_WDR26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50897">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="CTLH" evidence="8">
        <location>
            <begin position="105"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="267"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="312"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="354"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="524"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="21"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00065067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW18275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="586" mass="65392" checksum="6F18E761CBF88CF9" modified="2014-02-19" version="1">MGGVEDEEPALKRMKVSSKGLVGLSNGSSSSVEPVGGPSSDLMARPLSSEGDGEVVGSRGVIKREEFVRIITKALYSLGYKKSGARLEEESGIPLHSSIVNLCMQQILDGHWDESIVTLSKIGLVEENVLRAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRQLSSYMLSPCGQVGSSRRGIVQVRTRSKLLEELQNLLPPTILIPEKRLEHLVEQALILQREACMFHNSLDREMSLYSDHHCGKTQIPSRTLQVLEAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVDMNGGLSMKHKLSGHLKSVSSVSWSPNDQELLTCGVEEAVRRWDVSTGKCLQVYEKNGPGLISCAWFPSGKYILSGLSDKSICMWDLDGKEVESWKGQRTLKISDLEITGDGEHFLSICKDNAILFFNRETKEEIFIEEEQTITSFSLSKDSRFLLANLLDQEIHLWNIEGDPKLIGKYRSHKRTRLIVRSCFGGLKQSFIASGSEDSQVYIWHRNSGDLVEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKRLNVKYPPNLLRTNGVVHYCNGGGELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN37</accession>
    <name>V7BN37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Solute carrier family 25 member 44</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G122100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW19404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7BN37"/>
    <dbReference type="Gramene" id="ESW19404">
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        <property type="gene ID" value="PHAVU_006G122100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0765">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSCVYYV"/>
    <dbReference type="OrthoDB" id="250329at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46080">
        <property type="entry name" value="MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46080:SF5">
        <property type="entry name" value="OS01G0329400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="30"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="4">
        <location>
            <begin position="126"/>
            <end position="214"/>
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    </feature>
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        <location>
            <begin position="233"/>
            <end position="320"/>
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    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW19404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="330" mass="35798" checksum="E8CECF327078C263" modified="2014-02-19" version="1">MGMEADATTTSQLPLTDTDINWDRLDKTKFHVIGAILFTAQSGLLHPTAVVKTRMQVAGSELSHVRGTSVLAHILRSDGVPGIFRGFGTSAIGSIPGRVVALTSLEVSKDIILKHTQGTRIPEASRVGLANALAGMISNLVSCVYFVPLDVICQRLMVQGLPGTTFCRGPFDVVRKVVEAEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWRSLGYKDDTGEKPSDVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQSSLRSFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN53</accession>
    <name>V7BN53_PHAVU</name>
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        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="3" type="ORF">PHAVU_006G043500g</name>
    </gene>
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        <name type="scientific">Phaseolus vulgaris</name>
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        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN53"/>
    <dbReference type="STRING" id="3885.V7BN53"/>
    <dbReference type="Gramene" id="ESW18468">
        <property type="protein sequence ID" value="ESW18468"/>
        <property type="gene ID" value="PHAVU_006G043500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7JS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWAKKFD"/>
    <dbReference type="OrthoDB" id="603213at2759"/>
    <dbReference type="PhylomeDB" id="V7BN53"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001709">
        <property type="term" value="P:cell fate determination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="TPD1"/>
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        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33184">
        <property type="entry name" value="PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24068">
        <property type="entry name" value="TPD1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754561" evidence="2">
        <location>
            <begin position="24"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW18468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="123" mass="13331" checksum="F766687262B15190" modified="2014-02-19" version="1">MATSTIKLFNMILFFIFFSQGYSKCSLEDIHVSQAITGLTVKGKPELSVTVANWCSCAQSNVKLDCKGFQSVKSIDPSILKVSGHVCLVNSGNPILEEGVVEFSYAWDTPFSLLPISSDISCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN62</accession>
    <name>V7BN62_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G005300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
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                <person name="Jackson S.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7BN62"/>
    <dbReference type="Gramene" id="ESW18006">
        <property type="protein sequence ID" value="ESW18006"/>
        <property type="gene ID" value="PHAVU_006G005300g"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="OrthoDB" id="1875751at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
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        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="Heterogeneous nuclear ribonucleoprotein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000469">
        <property type="entry name" value="Heterogeneous nuclear ribonucleoprotein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
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        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033:SF4">
        <property type="entry name" value="OS08G0320100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48033">
        <property type="entry name" value="RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="18"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="106"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="353" mass="36746" checksum="EFD733FC058E1D4F" modified="2014-02-19" version="1">MASRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRQTGRPRGFGFITYADPSVVDQVIQDNHIINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDEFKNFFSNYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILEDGSMIDMAGTQVEIKKAEPKKSSNPASLAPFASDSRARSYNDGFSGFGDSYGSFGGSGYGPGSYRSLGGGFAGRLGDYGGYGAGDDFGGSFGGYGGSGAGGYAGFRGESSFGYSSRYGSYMGGLGAGYGSSGLGVYGRGAGGYGSYGGPGTGGGYESGPGAGYGGAGGGVYPSRGSYGGSSRYHPYTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPY9</accession>
    <name>V7BPY9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ALOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G176100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant homeotic and developmental regulators ALOG protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPY9"/>
    <dbReference type="SMR" id="V7BPY9"/>
    <dbReference type="STRING" id="3885.V7BPY9"/>
    <dbReference type="Gramene" id="ESW20042">
        <property type="protein sequence ID" value="ESW20042"/>
        <property type="gene ID" value="PHAVU_006G176100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTCS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIVMTKE"/>
    <dbReference type="OrthoDB" id="1906822at2759"/>
    <dbReference type="PhylomeDB" id="V7BPY9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009299">
        <property type="term" value="P:mRNA transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009416">
        <property type="term" value="P:response to light stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040222">
        <property type="entry name" value="ALOG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006936">
        <property type="entry name" value="ALOG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31165">
        <property type="entry name" value="PROTEIN G1-LIKE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31165:SF8">
        <property type="entry name" value="PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04852">
        <property type="entry name" value="ALOG_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51697">
        <property type="entry name" value="ALOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="ALOG" evidence="9">
        <location>
            <begin position="35"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="154"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="159"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW20042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="183" mass="20542" checksum="4B0C5C526092525B" modified="2014-02-19" version="1">MSAEMHNESASSSRAVAAASDHRHQQQPVPAPLSRYESQKRRDWNTFGQYLKNQTPPVSLSLCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKKNQLKGPHHPPKSLKQLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR31</accession>
    <name>V7BR31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G207900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR31"/>
    <dbReference type="SMR" id="V7BR31"/>
    <dbReference type="Gramene" id="ESW20424">
        <property type="protein sequence ID" value="ESW20424"/>
        <property type="gene ID" value="PHAVU_006G207900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMCPSEA"/>
    <dbReference type="OrthoDB" id="689350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044526">
        <property type="entry name" value="NAKR1-3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46119">
        <property type="entry name" value="OS08G0405700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46119:SF8">
        <property type="entry name" value="OS08G0405700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="1">
        <location>
            <begin position="97"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="163" mass="18077" checksum="6D155FD4CD9113E8" modified="2014-02-19" version="1">MNLKNSKRTMRNGFMCPSEASTAVWSAVVPRKRHERSVSLDDTRLINCSNYSKIVDSATATFNSAHNSLSSANIQQRSQNQENGSTQLHKTPTDHVFQVVVMRVAIHCEGCAGKVKKHLSKMEGVTSFSVDVESKRVTVMGYISPVGVLQSISKVKRAEFWTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRA7</accession>
    <name>V7BRA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Wall-associated receptor kinase galacturonan-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G137000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRA7"/>
    <dbReference type="STRING" id="3885.V7BRA7"/>
    <dbReference type="Gramene" id="ESW19580">
        <property type="protein sequence ID" value="ESW19580"/>
        <property type="gene ID" value="PHAVU_006G137000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RMXX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NESSHEC"/>
    <dbReference type="OrthoDB" id="1435304at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33491">
        <property type="entry name" value="OSJNBA0016N04.9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754819" description="Wall-associated receptor kinase galacturonan-binding domain-containing protein" evidence="3">
        <location>
            <begin position="20"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Wall-associated receptor kinase galacturonan-binding" evidence="4">
        <location>
            <begin position="30"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="306" mass="34015" checksum="27D7B989ED49483A" modified="2014-02-19" version="1">MILKLVIHFIILVIWEVSAQGELPLAKPGCDSQCGDVTIPFPFGMKSSECYAGKWFEIECRNTSTYTHYTPYLKLIGLEVVDIYLEAGLVTINHPIYRSNCGSKDSPPVNQSLEGSPFVYSQEHNIFVAAGCNSVAILKLNGSEVSGCVSTCNENYKVGDIGNIKLIESDCNGTSCCESSLPPYLKEYSIEIKGLKENESSHECSYALVVQPDRDYGYRHYSYNDPRGYFVEDRLMKDLDVVPALLEWEIVNNLNLTLPSDHHSQCYDTKITSSLYKRSGQRCSCNTGFGNPYFEGGCPAGNRAVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSP7</accession>
    <name>V7BSP7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G176200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PC-esterase family. TBL subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSP7"/>
    <dbReference type="SMR" id="V7BSP7"/>
    <dbReference type="STRING" id="3885.V7BSP7"/>
    <dbReference type="Gramene" id="ESW20043">
        <property type="protein sequence ID" value="ESW20043"/>
        <property type="gene ID" value="PHAVU_006G176200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R1CW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PSCEGFR"/>
    <dbReference type="OrthoDB" id="630188at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016413">
        <property type="term" value="F:O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029962">
        <property type="entry name" value="TBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026057">
        <property type="entry name" value="TBL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025846">
        <property type="entry name" value="TBL_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285:SF250">
        <property type="entry name" value="PMR5_CAS1P GDSL_SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285">
        <property type="entry name" value="PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13839">
        <property type="entry name" value="PC-Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14416">
        <property type="entry name" value="PMR5N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757043" evidence="7">
        <location>
            <begin position="27"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="Trichome birefringence-like N-terminal" evidence="9">
        <location>
            <begin position="50"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Trichome birefringence-like C-terminal" evidence="8">
        <location>
            <begin position="104"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF14416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW20043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="400" mass="46008" checksum="5EA355226385A2D3" modified="2014-02-19" version="1">MYTSGNIPKGAFLLPLTLFLIVPLLPLLRNFMQPSPNTDATTNLETKETKKCNIFSGNWVPYPQQPYYSNQTCPFILDQLNCIKNGRSDRDFLKLRWKPHDCELPLFDATQFLELVRGKSIAFVGDSMGRNQLESLLCLINTVARPEDITAKHTSYDDIFFRWWFVADYNFTVTTLWSPFLVKFNDSDPSGRAYYSATKLYLDEPDEAWSSKIKNFDYVVFSTGQWFFRPLTFYEKGQVVGCQKCQNSTELNFYGYKKAFQTAFRTLRNVEGFKGVSFLVSHSPEHFENGAWNEGGSCNRTKPFSLEERGVYESGDIVKALHEIQVEEFNAARENGLRFGLIDITDAMAMRADGHPSRFKPGNKNVNDCVHWCLPGAVDTWNEFLLYLMKLEGQKHNNML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSU0</accession>
    <name>V7BSU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Exopolygalacturonase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G039700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSU0"/>
    <dbReference type="SMR" id="V7BSU0"/>
    <dbReference type="STRING" id="3885.V7BSU0"/>
    <dbReference type="Gramene" id="ESW21077">
        <property type="protein sequence ID" value="ESW21077"/>
        <property type="gene ID" value="PHAVU_005G039700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSBG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DACQWRG"/>
    <dbReference type="OrthoDB" id="187139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31375">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00502">
        <property type="entry name" value="POLYGALACTURONASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6 9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754700" description="Exopolygalacturonase" evidence="10">
        <location>
            <begin position="19"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW21077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="368" mass="39585" checksum="82330FC05F557ACB" modified="2014-02-19" version="1">MCAKYLFMLCLLAYSAEAQTKIFNVKDYGASADGSTDNTWSDACKWKGDTNVVIPEGTYMLRSVIFNGPCNGAITFQINGGTLDGQGTATRQKCLNNSCQILFTSMDLDFITNGRIENLHSFDSKGGHFIVFGSANMTFTKLSLISPANNRNTDGIKISHTNGINITSVTIATGDDCVAMISGAKNVRITDVFCGPGHGISVGSLGGGNPLELPVEDIVVMNCTFNGSSNGVQIKTWPFPLKTPLKVSNFTYEDIVMINVQNPIFINQQYCPEHNCDLSKSSSVQISNVSYKNIRGSSATDVAVNFNCSKEVPCQDVTVEDIDLMSSGGKGRQKLSNFCFNVKGSSFGKQIPPSCVASNRFVSAPLPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSW2</accession>
    <name>V7BSW2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G182500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSW2"/>
    <dbReference type="STRING" id="3885.V7BSW2"/>
    <dbReference type="Gramene" id="ESW20118">
        <property type="protein sequence ID" value="ESW20118"/>
        <property type="gene ID" value="PHAVU_006G182500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3A4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWDYPPV"/>
    <dbReference type="OrthoDB" id="679818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38364:SF1">
        <property type="entry name" value="OS04G0475300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38364">
        <property type="entry name" value="OSJNBA0022H21.9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="17210" checksum="84B4B80FD1F5B94B" modified="2014-02-19" version="1">MEEASWEQRLQALTHILTSPTTTPSLHSQFFIATQIPCYLNWDYPPFLCSNPNILRKWLCSFFLKRVLGTAPPQTSWRSKCPFHQPQPLILAEGLQDPNWAPQERRAYVRKRMARKLRKNVNPALYILIPNLLLLSLMIWNPFPPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTN2</accession>
    <name>V7BTN2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G166800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTN2"/>
    <dbReference type="SMR" id="V7BTN2"/>
    <dbReference type="STRING" id="3885.V7BTN2"/>
    <dbReference type="Gramene" id="ESW19926">
        <property type="protein sequence ID" value="ESW19926"/>
        <property type="gene ID" value="PHAVU_006G166800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0610">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PFAKFNS"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048825">
        <property type="term" value="P:cotyledon development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd05574">
        <property type="entry name" value="STKc_phototropin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000277">
        <property type="entry name" value="protein kinase PINOID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000351">
        <property type="entry name" value="protein kinase PINOID 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000020">
        <property type="entry name" value="serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="3" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="80"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="12"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW19926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="449" mass="50562" checksum="985B9C8560B2F91A" modified="2014-02-19" version="1">MLVETTCARDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSTIFRRHSALTFRDFHLLRRIGAGDIGTVYLCRLRHDEEECFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDCSLDPAFARTLPYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYSRTPFAGSSNEATLRNIIKNSLAFPTATPSTTLETHARDLISRLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRRHKTTPFCPANDNGNVNNSRHELTAFDYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUI7</accession>
    <name>V7BUI7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="16">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_005G088800g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="16">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="16"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUI7"/>
    <dbReference type="SMR" id="V7BUI7"/>
    <dbReference type="Gramene" id="ESW21657">
        <property type="protein sequence ID" value="ESW21657"/>
        <property type="gene ID" value="PHAVU_005G088800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSMT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIEAYLW"/>
    <dbReference type="OrthoDB" id="785331at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021820">
        <property type="entry name" value="S-locus_recpt_kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF900">
        <property type="entry name" value="S-LOCUS LECTIN KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11883">
        <property type="entry name" value="DUF3403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00473">
        <property type="entry name" value="PAN_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 16 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="13" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 16 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 16" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="4 16" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="350"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="23">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="22">
        <location>
            <begin position="197"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="24">
        <location>
            <begin position="252"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="420"/>
            <end position="705"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="703"/>
            <end position="736"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="19">
        <location>
            <begin position="715"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="448"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW21657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="736" mass="82632" checksum="167F2F092F4C4F9D" modified="2014-02-19" version="1">MLRMNTSTGNLVLTQNGKVVWSTTSLRKAESPVALLLDSGNLVVRDEKDANIEAYLWQSFDYPTDTFLPEMKFGWDLRTGINRKLTAWKSPDDPSPSDFSFGMVLHTYPEAYMMKGNQKFYRSGPWNGLHSSGSPHVKANPIYDFRFVFNEAEVYYTYSLKNSSVISRLVLNGTSYVRRRYVWIESTQIWEVYTSVPLDLCDSYSLCGANANCVISDSPVCQCLKGFKPKSPQAWSSMDWSHGCVRNKELSCENKHMDGFIKLPEMKTPDTTHTWLDQTIGLEECRAKCLDNCSCMAYANSDISEGTGCAMWFGDLIDVRQFSDGGQDLYVRMDASELEHTSESHKKGGVLVAVTASLAVATVSGILIVLGLCYRKKSRANVKERSDFSIRSYQNSGIQEADMDLPVFDLSTIAKATNNFTIKNKIGEGGFGSVYRGTLADGLEIAVKRLSESSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMINGSLNSFIFDQEKSELLDWSKRFNIMCGITKGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGGDQKEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNHSQNLIGHAWDLWKKGRPLELVDKSIENSLFQSQILHCIHVSLLCVQQNPDDRPGMSCVLLMLVSEVELPEPKQPGFFGKYSGEGDSSTSKQQKSSTNEITITLLEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVV0</accession>
    <name>V7BVV0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">PGG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G046300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVV0"/>
    <dbReference type="SMR" id="V7BVV0"/>
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        <property type="protein sequence ID" value="ESW21153"/>
        <property type="gene ID" value="PHAVU_005G046300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 5"/>
    </dbReference>
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        <property type="term" value="C:plasma membrane"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="entry name" value="PROTEIN ACCELERATED CELL DEATH 6-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24186">
        <property type="entry name" value="PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00023">
        <property type="entry name" value="Ank"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="507"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="548"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="586"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="616"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="120"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="335"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="407"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="PGG" evidence="11">
        <location>
            <begin position="500"/>
            <end position="608"/>
        </location>
    </feature>
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        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
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    </evidence>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW21153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="679" mass="76589" checksum="45D9281D076C75F8" modified="2014-02-19" version="1">MKDFRGGEETSMKNDDLENNYKEGEQASRNAIEEKRIERSEDSDEVEAHGWCLLPKRTYDAIKQNKGESWREIDYQSLQQESPKENTVLHVAALYGNDRCVERILEICPAAELLRVRNGNGDTPLHVAARAGKISTLHKLVAPLLRNPKQAELAILTTNNLRNTLFHEALLNGHKDVMEILDSSPDFRNWVEENVFIMKNGQGKSVLHLAFEKGYEDIVDDVLTRVVPVLEFVTDDPFGGPMIASVVLNRRKPKKPNSFWTTLQKDGARSPLISTILKQNKGILEKIVKEKKEWIHFKDNIGRNALHYAASIGYLHGVEYLLQNCHTCSMERDNDGFFPLHLASAFGHIEVLKKLLENCPDPREIVDNKGRNIVHIAAIMGEFNVIRYILQDANDEVKDMINGKDYDGNTPLHLAASHSRPKIVQALTWDTRVDLHCLNNNNQTALDAFEQFKQENNPPFLQRLTWCQLKSAGVQNARRGSHSIEIPCPHKPEAKSTDFYKDRIDTLMVVSTLITTIAFAAGFTLPGGNNSSNPKQQGMAVMLNHMLFKPYIFCITTSMYGGISVTIILIWAQLGDITLALLALKVAIPLLGVTLATLSVAFLAGVHLVISDLSWLATTILILCVIFILLLLLLYTLLWFPIESSNIIMRNISFYPFQFLTWLFEKDSTEDEMEGSSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYF5</accession>
    <name>V7BYF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G127600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the histone deacetylase HD2 family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW22103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW22103"/>
        <property type="gene ID" value="PHAVU_005G127600g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKNEVHI"/>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006325">
        <property type="term" value="P:chromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.340:FF:000004">
        <property type="entry name" value="Histone deacetylase HDT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.340">
        <property type="entry name" value="Nucleoplasmin core domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041232">
        <property type="entry name" value="NPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17800">
        <property type="entry name" value="NPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0678">Repressor</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="11">
        <location>
            <begin position="270"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="102"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="102"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
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        <location>
            <begin position="152"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="162"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="203"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="265"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="279"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006673"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW22103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="31968" checksum="94443B387CF3C0A4" modified="2014-02-19" version="1">MEFWGAEVKVGESVKVDPTEFEACIHLSQAALGEAKKEKPNEPVVVFLKVGEQKFVLGTLSREKIPQISLELVLEKEFELSHSSKNATVHFCGYKAYYSGDDSEEDEFTDSDEDIPLVNTENGKPEKKSEEVKAVGSKKPDAKAAAPSKKVKVVEPEKDKEDSDDDSDEDEAFGISDEEMDDADSDDSDEESGSDEDDDEETPPPKKADLGKKRPNESASKTPVSSKKAKNATPEKNDGKKTGNVGTPHSAKKGGKTPNSEAKSPKSGGLSCKSCSKSFNSDSGLQQHNKAKHGGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0T9</accession>
    <name>V7C0T9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein 70</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G075000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0T9"/>
    <dbReference type="STRING" id="3885.V7C0T9"/>
    <dbReference type="Gramene" id="ESW23782">
        <property type="protein sequence ID" value="ESW23782"/>
        <property type="gene ID" value="PHAVU_004G075000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4478">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWFVTPY"/>
    <dbReference type="OrthoDB" id="156886at2759"/>
    <dbReference type="PhylomeDB" id="V7C0T9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031966">
        <property type="term" value="C:mitochondrial membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033615">
        <property type="term" value="P:mitochondrial proton-transporting ATP synthase complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009724">
        <property type="entry name" value="TMEM70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045325">
        <property type="entry name" value="TMEM70/TMEM186/TMEM223"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13281">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 70, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13281:SF0">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 70, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06979">
        <property type="entry name" value="TMEM70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="241" mass="26687" checksum="4472241E169BA09A" modified="2014-02-19" version="1">MARTALLHLLRSQSSRHVCRTTPSVYQCFRSSTCGRPFRPNPSFKTSSHLTAFQRRWASPAPATEEDDKISIGPHGGGQSVEDDKETGVVYHGPISNTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGALASTVIFLSASTTGALHWFVSPYIHKLRWQPGSDSFEVEMLSWLASSIPRTIKFSDIRPPETQRPFVTFKANGSFYFVDAEHCHNKALLARLTPQKGTRDSAFKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0U5</accession>
    <name>V7C0U5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="19">Chlorophyll a-b binding protein, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_004G071500g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 19">The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast thylakoid membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 19">Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0U5"/>
    <dbReference type="SMR" id="V7C0U5"/>
    <dbReference type="STRING" id="3885.V7C0U5"/>
    <dbReference type="Gramene" id="ESW23744">
        <property type="protein sequence ID" value="ESW23744"/>
        <property type="gene ID" value="PHAVU_004G071500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTYF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTSDWMP"/>
    <dbReference type="OrthoDB" id="423598at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009522">
        <property type="term" value="C:photosystem I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009523">
        <property type="term" value="C:photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016168">
        <property type="term" value="F:chlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009765">
        <property type="term" value="P:photosynthesis, light harvesting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3460.10:FF:000004">
        <property type="entry name" value="Chlorophyll a-b binding protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3460.10">
        <property type="entry name" value="Chlorophyll a/b binding protein domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001344">
        <property type="entry name" value="Chloro_AB-bd_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022796">
        <property type="entry name" value="Chloroa_b-bind"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21649">
        <property type="entry name" value="CHLOROPHYLL A/B BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00504">
        <property type="entry name" value="Chloroa_b-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103511">
        <property type="entry name" value="Chlorophyll a-b binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 18 19" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="5 19" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="15 19" id="KW-0157">Chromophore</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="17" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6 19" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="11 19" id="KW-0603">Photosystem I</keyword>
    <keyword evidence="19" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="8 19" id="KW-0934">Plastid</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="16 19" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="13" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" evidence="18">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="18">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR601344-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="RuleBase" id="RU363080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW23744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="244" mass="26398" checksum="1A0774F3165730C2" modified="2014-02-19" version="1">MAANTLMSSAITAFPSLLSSSKSRFASSVPISSFGTNASSRFSMTSDWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKSFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGNIVIPQSISP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C110</accession>
    <name>V7C110_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Shikimate kinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G081400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the shikimate kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C110"/>
    <dbReference type="SMR" id="V7C110"/>
    <dbReference type="STRING" id="3885.V7C110"/>
    <dbReference type="Gramene" id="ESW23852">
        <property type="protein sequence ID" value="ESW23852"/>
        <property type="gene ID" value="PHAVU_004G081400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSF9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISIWVDV"/>
    <dbReference type="OrthoDB" id="197068at2759"/>
    <dbReference type="PhylomeDB" id="V7C110"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001033">
        <property type="entry name" value="Shikimate kinase 2, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00109">
        <property type="entry name" value="Shikimate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031322">
        <property type="entry name" value="Shikimate/glucono_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000623">
        <property type="entry name" value="Shikimate_kinase/TSH1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21087:SF4">
        <property type="entry name" value="INACTIVE SHIKIMATE KINASE LIKE 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21087">
        <property type="entry name" value="SHIKIMATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01202">
        <property type="entry name" value="SKI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01100">
        <property type="entry name" value="SHIKIMTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="290" mass="31755" checksum="5E69A4DD94D9CD42" modified="2014-02-19" version="1">MEKVSVNRMNARFALPNGSFDFLQFKHSNFFLKYPNPNLNPSPNPNPNLLRLRRLNCSVSDGTVPSSVGATDSALVVKKKAAEVSSDLKGTSIFLVGMKSSLKTSLGKLLADALRYYYFDSDSLVEEALGGALAEKSFTESDTKGFYESETEVLKQLSSMGRLVVCAGNGAVTSPTNLALLRHGITLWIDVPVDLVARDVIEDESQFTPSEIPISGSYPEVKDELGAIYVKYRAGYATADAIISVQKVASRLGCDNLDEVTREDLTLEALKEIEKLTRVKKMIEEAARPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2X6</accession>
    <name>V7C2X6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">alcohol dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_004G136700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a primary alcohol + NAD(+) = an aldehyde + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10736"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15734"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a secondary alcohol + NAD(+) = a ketone + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:35681"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2X6"/>
    <dbReference type="SMR" id="V7C2X6"/>
    <dbReference type="STRING" id="3885.V7C2X6"/>
    <dbReference type="Gramene" id="ESW24509">
        <property type="protein sequence ID" value="ESW24509"/>
        <property type="gene ID" value="PHAVU_004G136700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QVNEGYQ"/>
    <dbReference type="OrthoDB" id="417550at2759"/>
    <dbReference type="PhylomeDB" id="V7C2X6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051903">
        <property type="term" value="F:S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046294">
        <property type="term" value="P:formaldehyde catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08301">
        <property type="entry name" value="alcohol_DH_plants"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000007">
        <property type="entry name" value="Alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000003">
        <property type="entry name" value="S-(hydroxymethyl)glutathione dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000099">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880:SF5">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE-LIKE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Alcohol dehydrogenase-like N-terminal" evidence="13">
        <location>
            <begin position="35"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="Alcohol dehydrogenase-like C-terminal" evidence="12">
        <location>
            <begin position="203"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW24509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="376" mass="40387" checksum="A88F55FC137FEF27" modified="2014-02-19" version="1">MATSTPQVITCKAAVAWGAGEPLVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVFIGECMTCKQCTSGKSNICQVLGLERRGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVIHSGCAVKVSPHAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAKAFGVTEVVDPNSCEEPVAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPVMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFDDINKAFNLMKEGKCLRCVIHMPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C310</accession>
    <name>V7C310_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phytocyanin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G032800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">May act as a carbohydrate transporter.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the early nodulin-like (ENODL) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C310"/>
    <dbReference type="SMR" id="V7C310"/>
    <dbReference type="STRING" id="3885.V7C310"/>
    <dbReference type="Gramene" id="ESW23271">
        <property type="protein sequence ID" value="ESW23271"/>
        <property type="gene ID" value="PHAVU_004G032800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1MH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DAFIHFW"/>
    <dbReference type="OrthoDB" id="1851979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000018">
        <property type="entry name" value="Lamin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039391">
        <property type="entry name" value="Phytocyanin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003245">
        <property type="entry name" value="Phytocyanin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021">
        <property type="entry name" value="BLUE COPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021:SF231">
        <property type="entry name" value="EARLY NODULIN-LIKE PROTEIN 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02298">
        <property type="entry name" value="Cu_bind_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51485">
        <property type="entry name" value="PHYTOCYANIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755307" description="Phytocyanin domain-containing protein" evidence="6">
        <location>
            <begin position="34"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Phytocyanin" evidence="7">
        <location>
            <begin position="34"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00037626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="177" mass="20057" checksum="5BA2907A9113D105" modified="2014-02-19" version="1">MMEDMMKKRVFSPPIVLLLLAFSLLLMLPEASATKFTVGDNRFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQANVLEVNKTEYETCNSDHPLQNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKASPVVSGAPNLFSSGHILLMPVVFAIGTAWDAFIHLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C376</accession>
    <name>V7C376_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_004G039200g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C376"/>
    <dbReference type="SMR" id="V7C376"/>
    <dbReference type="Gramene" id="ESW23346">
        <property type="protein sequence ID" value="ESW23346"/>
        <property type="gene ID" value="PHAVU_004G039200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NINCIER"/>
    <dbReference type="OrthoDB" id="1431717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000003">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000007">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001023">
        <property type="entry name" value="Os07g0541700 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000039">
        <property type="entry name" value="receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590">
        <property type="entry name" value="OS03G0124300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590:SF15">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 18" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754947" description="non-specific serine/threonine protein kinase" evidence="18">
        <location>
            <begin position="20"/>
            <end position="744"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="429"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="19">
        <location>
            <begin position="496"/>
            <end position="744"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="404"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="16">
        <location>
            <begin position="404"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="525"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW23346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="744" mass="83809" checksum="6CAC9E94BAC90B03" modified="2014-02-19" version="1">MTFNAVIFLLLHLLPHLQGYTPLDNFTITCGSSGTSYDGQRTWTGDTESVLLTNEDATVSAKPTTLSPSTNHVPYATARLSPSQFSYSFYFNTAGPKFLRLFFFPASYPSFPRTLSSFSVHSNQFILLQDFNASLNADAENKEIIFKEYIVYVEEDQALILIFTPSQSNSYAFINGIEVLSMPSDLYYTSENDTGFTNVGSTNPFVVGKRFAMETGYRIKVGEQEISPQNDTGLFRKWAGDEERYFIKQNTGVSETYGKMNITVNPDYVAPEELYRTARNQGTNGTLNKISNLTWVFPVDCGFTYVLRLHFCELDPHINDIGDRQFFIYINSKLAEEHADVMKWSEKQKGLAVHRNYAVMIPKNDTQKKFNLSLQMHPYQSSVDTTYSDAFINGLEIFKMSDTRSNSLAGPNPDQIKTPQQKGSNRRRMIGITAGIVSGVVFISLVVFFVLFSTTSKWTPLLFPTTKSTNDHNFSLPSDQCRRFSLVEIKAATKNFDNTFIVGDGGFGHVYKGFIEDGSIPVAIKRLRQGSQQGACEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMIIVYDFMGRGNLRDHLYGTDNPSLSWKERLKICIGAARGLRYLHSGAKHVIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSLGVVLFEVLCARSPLIHTEEIEQVSLAKLGQILLPKRDSGGDCGPHIKGEDRSKVFRHVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5D9</accession>
    <name>V7C5D9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Aquaporin TIP-type alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G136000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Vacuole membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5D9"/>
    <dbReference type="SMR" id="V7C5D9"/>
    <dbReference type="STRING" id="3885.V7C5D9"/>
    <dbReference type="Gramene" id="ESW24500">
        <property type="protein sequence ID" value="ESW24500"/>
        <property type="gene ID" value="PHAVU_004G136000g"/>
    </dbReference>
    <dbReference type="OMA" id="LALNTMH"/>
    <dbReference type="OrthoDB" id="3222at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015250">
        <property type="term" value="F:water channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00333">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1080.10:FF:000002">
        <property type="entry name" value="Probable aquaporin TIP1-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="entry name" value="Glycerol uptake facilitator protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034294">
        <property type="entry name" value="Aquaporin_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022357">
        <property type="entry name" value="MIP_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00861">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45665:SF23">
        <property type="entry name" value="AQUAPORIN TIP3-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45665">
        <property type="entry name" value="AQUAPORIN-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="Aquaporin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00221">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="3" id="KW-0926">Vacuole</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="170"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW24500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="256" mass="27131" checksum="CD81083F4A534CCC" modified="2014-02-19" version="1">MATRRYSFGRADEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVTFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSNIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHHHQPLATEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5F9</accession>
    <name>V7C5F9_PHAVU</name>
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        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G034000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5F9"/>
    <dbReference type="Gramene" id="ESW25417">
        <property type="protein sequence ID" value="ESW25417"/>
        <property type="gene ID" value="PHAVU_003G034000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IPAECAV"/>
    <dbReference type="OrthoDB" id="9984778at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47662">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47662:SF1">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="87"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW25417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="164" mass="19527" checksum="7A305550113E3586" modified="2014-02-19" version="1">MHINLTLISAKLESPPKQIDSYFFSTKIFSMLMKYLSEFYSHIKWVLDFLLFFPFYTLHDSQMPMIAEDQSICYYEHTPDTEEDDDCAVCLSKIGDGEEIRVLRCEHFFHRNCLDQWVALKNGSCPLCRDPVRPRRAMNEVGAEVLWFQFCTVHTNEPDRWWLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5T3</accession>
    <name>V7C5T3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G153100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5T3"/>
    <dbReference type="SMR" id="V7C5T3"/>
    <dbReference type="STRING" id="3885.V7C5T3"/>
    <dbReference type="Gramene" id="ESW24708">
        <property type="protein sequence ID" value="ESW24708"/>
        <property type="gene ID" value="PHAVU_004G153100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MACNEAC"/>
    <dbReference type="OrthoDB" id="1426971at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042885">
        <property type="entry name" value="HIPP47/16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46932">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46932:SF18">
        <property type="entry name" value="HMA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="2">
        <location>
            <begin position="2"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="71"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="226" mass="25240" checksum="DD4017E1C05AD779" modified="2014-02-19" version="1">MKQKVVIKLQMDCDKCRNKALKIAAEVPGVTSVALEGDDSDRVAVSGENVDMVCLANQLKKKFSSVVIVTVEDLKKVAEEKKKKEDAEKKKKEEEEEKRKKMEEKLKSMLRACLCKKCNSSSCHGKCDIDSIFCFECKSSSCNGECCIVCVNCENAKWDGNCDSCSNCHKSNCSGSCCSSKSPSPCPKWCTCHKCYVPYQPYYYPPCPPQLVCYDSCPDQYPCSIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6L7</accession>
    <name>V7C6L7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FYVE-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G066900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6L7"/>
    <dbReference type="STRING" id="3885.V7C6L7"/>
    <dbReference type="Gramene" id="ESW25807">
        <property type="protein sequence ID" value="ESW25807"/>
        <property type="gene ID" value="PHAVU_003G066900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT6C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GNSMDRI"/>
    <dbReference type="OrthoDB" id="5981550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00065">
        <property type="entry name" value="FYVE_like_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13365">
        <property type="entry name" value="PH_PLC_plant-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.30:FF:000028">
        <property type="entry name" value="PH, RCC1 and FYVE domains-containing protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="BRX_N"/>
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    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058923">
        <property type="entry name" value="RCC1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000306">
        <property type="entry name" value="Znf_FYVE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017455">
        <property type="entry name" value="Znf_FYVE-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF358">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13713">
        <property type="entry name" value="BRX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01363">
        <property type="entry name" value="FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16457">
        <property type="entry name" value="PH_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25390">
        <property type="entry name" value="WD40_RLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SMART" id="SM00064">
        <property type="entry name" value="FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00233">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50178">
        <property type="entry name" value="ZF_FYVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="244"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="304"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="356"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="411"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="476"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="528"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="6">
        <location>
            <begin position="578"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="domain" description="FYVE-type" evidence="8">
        <location>
            <begin position="634"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="132"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="741"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="789"/>
            <end position="812"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="132"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="142"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="794"/>
            <end position="805"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="900" mass="98134" checksum="23D30F76A90E3C74" modified="2014-02-19" version="1">MADPQKTALGERDIEQAIAFLKKGSYLLKYGRRGKPKFCPFRLSNDESILLWYSDKEEKQLKLSTVSRIIPGQRTATFQRYPRPEKEYQSFSLIYSDRSLDLICKDKEEAEIWFVGLKALVTRANNRKWFESRTDDSHCSDSPKSSTRRSTPSNTPFSDPGDAGGAAFDVKNRWVKAFSEIISSNAASKSTSQAESIANSSLSSGCVDNSSNRNSASEAFRVSLSSAVSSSSQGSYHEDFDSLSDVFIWGEGIGNGILGGGVHRVGALSSMDAFLPKAFESKLVLDVHSISCGYRHAVLVTKQGEIFSWGEESGGRLGHGVEMDVFHPKLVDTLAGMNIESVACGEYHTCAVTYSGDLYTWGDGAHNSGMLGHGNEATHWIPKKISGNLEGLRVSYVSCGPWHTAIVTSAGQLFTFGDGTFGALGHGNHCSATIPQEVEILRGFRTTKVACGVWHTAAVVEAINESVESSTRSSSGRLFTWGDGDKGQLGHADREPRLVPECVIALSTENISQVACGHSLTIALTTSGHVYTIGSTAYGQLGCPASDGKVPTCVKIADSFVEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVFCGSNFTAAVCLHKWIPSVDHSTCFGCRNPFNFRRKRHNCYNCGLVFCKSCTSKKSRKASLAPNTSKPYRVCEDCYLKLKKPAESVPLVQTPSLRSVSLQENRTTKIQGTLLRLSSFGSILQTESSQLKLPDSQDSHRSPASNGKLEMKGFASSKSSNSVFVDSKKNLPFSEPAARLSCQTTSPVSSKSSPRESYEDINDDLKHRNDILSQEVIILRTQVEDLTRKSKSLEAELERTSKQLKEVTAVAADEAGKCKSAKEVIKSLTAQVGYSIRWVVYSPLLHC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7M7</accession>
    <name>V7C7M7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G021700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7M7"/>
    <dbReference type="SMR" id="V7C7M7"/>
    <dbReference type="Gramene" id="ESW25270">
        <property type="protein sequence ID" value="ESW25270"/>
        <property type="gene ID" value="PHAVU_003G021700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMAKLYP"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000581">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000327">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052059">
        <property type="entry name" value="CR_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47973">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="6">
        <location>
            <begin position="52"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="323"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="324"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="362"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="407" mass="45591" checksum="D2C27DAE6AA6F8A9" modified="2014-02-19" version="1">MTKPNSFFHNLIKPFKFTSSKEEHSEDDIQKLAEQENKIFPYETLVAATNKFSILNKLGEGGFGPVFKGKLSDGREIAVKRLSRRSNQGKTQFINEARLLGRVQHRNVVNLIGYCAHASEKLLVYEYVPRKSLDKLLFKSGKKEELNWKRRFDIISGVGRGLLYLHEDSHNCIIHRDIKASNILLDEKWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLSVKADVFSYGVLVLELVSGQKNSSFDTNLSAQNLLDWAYRLYKKGRAMEMVDPALGSSIITEQLEMCIKLGLLCTQGDPNLRPTMGRVVVMLSKKPDNMEEPTRPGMPGSRFRRVPRRPSAMFSSGVDDDSNSNSHTCDSSNYGTNNNTTSATSSSTTPSSTATAQVDPRGKRPMKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8F3</accession>
    <name>V7C8F3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">aldehyde dehydrogenase (NAD(+))</fullName>
            <ecNumber evidence="5">1.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G052500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Possesses activity on acetaldehyde and glycolaldehyde in vitro.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>an aldehyde + NAD(+) + H2O = a carboxylate + NADH + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:16185"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.2.1.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion matrix</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.3" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8F3"/>
    <dbReference type="SMR" id="V7C8F3"/>
    <dbReference type="STRING" id="3885.V7C8F3"/>
    <dbReference type="Gramene" id="ESW25633">
        <property type="protein sequence ID" value="ESW25633"/>
        <property type="gene ID" value="PHAVU_003G052500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2450">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRHVMIK"/>
    <dbReference type="OrthoDB" id="310895at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004029">
        <property type="term" value="F:aldehyde dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd07142">
        <property type="entry name" value="ALDH_F2BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.605.10:FF:000011">
        <property type="entry name" value="ALD5p Mitochondrial aldehyde dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.605.10:FF:000026">
        <property type="entry name" value="Aldehyde dehydrogenase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.309.10:FF:000001">
        <property type="entry name" value="Mitochondrial aldehyde dehydrogenase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11699">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldehyde dehydrogenase" evidence="10">
        <location>
            <begin position="63"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00049194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00056732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW25633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="535" mass="58403" checksum="4DF5B447CB69B023" modified="2014-02-19" version="1">MASPLRISRLISRSFSSTSFSARGGNSYLGPRLCKYSTAAAIEEPIKPAVQVEYTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDHGPWPRMTAYERQRILLRAADLIEKHNDEIAALETWDNGKPYEQSAKIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSAFYVAKLFLEAGLPPGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTYVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSEQFEKILRYVRLGVESGATLETGGDRLGDKGYYIQPTVFSNVKDDMRIATDEIFGPVQSILKFKDLGEVVQRANNSRYGLAAGVFTKNIDTANILTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNSLKNPAWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9N1</accession>
    <name>V7C9N1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G081400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the JARID1 histone demethylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9N1"/>
    <dbReference type="SMR" id="V7C9N1"/>
    <dbReference type="Gramene" id="ESW25980">
        <property type="protein sequence ID" value="ESW25980"/>
        <property type="gene ID" value="PHAVU_003G081400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1356">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NFNDCRS"/>
    <dbReference type="OrthoDB" id="1667110at2759"/>
    <dbReference type="PhylomeDB" id="V7C9N1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000118">
        <property type="term" value="C:histone deacetylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031490">
        <property type="term" value="F:chromatin DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032454">
        <property type="term" value="F:histone H3K9 demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02208">
        <property type="entry name" value="cupin_RmlC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045109">
        <property type="entry name" value="LSDs-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12549">
        <property type="entry name" value="JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12549:SF37">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE JMJ26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02373">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="9">
        <location>
            <begin position="149"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="domain" description="JmjC" evidence="10">
        <location>
            <begin position="569"/>
            <end position="834"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="9"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW25980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="871" mass="100460" checksum="A5687AAFE4DF2A48" modified="2014-02-19" version="1">MKVVVPNKEQPKTPQTEDKSKLSRCSEVYGTPKRKAEKIPEHGHKKNCAVRVTEKKREVREINKFDNIKPKLEAREDLCSLKTTKLPCWRRDEKQKLTVSNKKRKYKDDLLNDDDLEDEEMLILLRAKTSSRSRRMNNVKNVEQKPRNCHQCMKKGRTLFVPCTKCPKMYCMQCVDKWYPDMKIEEIAVSCPFCRKNCNCNVCLSSRGMIKTSNRDITDYEKAQNLHYMINLLLPFLKQICHEQNQEEQIEAKILGKHSFEKEIPQSLCGNDERVYCDHCATSIIDLHRSCPSCSYELCLSCCQEIRDGSITPRVEQKFLYVNRGYDYMHGGDPLPVSNDFGTSECHTKLSNVWNAKSDGSIRCAPKEFGGCGSAALELRRVLPSGWISELEIRTRSMLKIWENVNTTLQQKKAVSSCTSLRKEAIKVDINDDNMYCSESSNIQKGGLLLFQKHWANGEPVIVRDALKLGTGLSWKPMVMWRALCENRISEVGSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLAAKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHLIISKLKEAHKVQDEREQCAQETVSDSLNGRPFKQNKVRTENKVVLESKDIEKRPIEINGRIFPNDVHEGFTSATENESIETGSALWDIFRREDSEKLETYLRKHSREFRHTYCSPVEEVAHPIHDQCFYLTSEHKKKLKEEFDVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVTDLKALLNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAB2</accession>
    <name>V7CAB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G071000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAB2"/>
    <dbReference type="SMR" id="V7CAB2"/>
    <dbReference type="STRING" id="3885.V7CAB2"/>
    <dbReference type="Gramene" id="ESW25856">
        <property type="protein sequence ID" value="ESW25856"/>
        <property type="gene ID" value="PHAVU_003G071000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEIIMRD"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000474">
        <property type="entry name" value="Pentatricopeptide repeat protein PPR986-12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000427">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF508">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="165"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="196"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="268"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="517"/>
            <end position="610"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW25856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="610" mass="68932" checksum="3C541D11EB4CADCB" modified="2014-02-19" version="1">MSTSPPPVLFSTTATNNDQSQHLSHTHLIHLLNQPTTLPQLKQIHAHTLRTVHTNHPQALFLYTRILLYSSVADLNYATRVFHHFSNPNSFMWNTLIRAYARSTNTNHKHKAMELYKAMVTGEEETAVPDNHTFPFVLKACAYTFSLCEGKQVHAHALKHGFELDTHVCNSLIHFYATCGRLDLAEKIFYKMNKRNEVSWNIMIDSYAKGGKFDTALKMFGEMQKEHDPDGYTMQSVFSACAGLGSLSLGLWAHAYILKKCDKNIVDDVLVNTCLVDMYCKCGELEIAKQVFESMPARDVNSWNSIIMGLAMHGKAEAALDHYVRMVKVDKIVPNSITFVGVLSACNHRGMVEEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRIDEALNVVSEMPIKPDAVIWRSLLDACCKQHASVELSEEMVRQVFESEGSVCSGVYVLLSKVYASACRWNDVGLLRKLMTDKGVTKEPGCSLIEIDGGVHEFFAGDTTHPQSENVYKFVNEIEEKLQSIGYLPDFSGATMVDEANDGKHNTLRLHSERLAIAFGILNSRPGMAVRVFKNLRVCNDCHRVTKLISRIYNVEIIVRDRARFHHFKDGSCSCMDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAW8</accession>
    <name>V7CAW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Transcription initiation factor TFIID subunit 9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G118200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAF9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAW8"/>
    <dbReference type="SMR" id="V7CAW8"/>
    <dbReference type="STRING" id="3885.V7CAW8"/>
    <dbReference type="Gramene" id="ESW26415">
        <property type="protein sequence ID" value="ESW26415"/>
        <property type="gene ID" value="PHAVU_003G118200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3334">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHDAQVM"/>
    <dbReference type="OrthoDB" id="341924at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000124">
        <property type="term" value="C:SAGA complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="term" value="C:transcription factor TFIID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016251">
        <property type="term" value="F:RNA polymerase II general transcription initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051123">
        <property type="term" value="P:RNA polymerase II preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd07979">
        <property type="entry name" value="HFD_TAF9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000018">
        <property type="entry name" value="Transcription initiation factor TFIID subunit 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003162">
        <property type="entry name" value="TFIID-31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051431">
        <property type="entry name" value="TFIID_subunit_9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48068">
        <property type="entry name" value="TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TATA-BOX BINDING PROTEIN ASSOCIATED FACTOR 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02291">
        <property type="entry name" value="TFIID-31kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="132"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="137"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="177" mass="20233" checksum="EC1A0CE2C72C7760" modified="2014-02-19" version="1">MGDKDEESGMPRDAKIVKSLLKSMGVEGYEPRVIHKFLELWYRYVVDVLTDAQVYSEHAGKSAIDCDDVKLAIQSKVNFSFSQPPPREVLLELAQNRNKIPLPKTISGPGIPLPPDQDTLINPNYQFGIRNKRPVEPLEETEDEETTIPNPTQEERVEMQQNPHQRVSFPLPKRQKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDE9</accession>
    <name>V7CDE9_PHAVU</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G198600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDE9"/>
    <dbReference type="STRING" id="3885.V7CDE9"/>
    <dbReference type="Gramene" id="ESW27398">
        <property type="protein sequence ID" value="ESW27398"/>
        <property type="gene ID" value="PHAVU_003G198600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PKYQYDP"/>
    <dbReference type="OrthoDB" id="1723198at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47076">
        <property type="entry name" value="NHL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47076:SF1">
        <property type="entry name" value="NHL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="158" mass="18237" checksum="B4D826BFD96C129A" modified="2014-02-19" version="1">MSIQFESESTTTPTAQAQERSNPACALLLPSCCLGQRRRSSWWERVRSTSWSHSNSSSSSDRWWSRGLRALKKLRDWSKIVAGPRWKTFLRKFNRNRTSKRMPKYQYDPMSYALNFDEGRNGDSNDDAALRNFSTRYAAVNLKSLSPKARDSDDAVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF67</accession>
    <name>V7CF67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">V-type proton ATPase subunit H</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G250900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates the ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the V-ATPase H subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF67"/>
    <dbReference type="STRING" id="3885.V7CF67"/>
    <dbReference type="Gramene" id="ESW28003">
        <property type="protein sequence ID" value="ESW28003"/>
        <property type="gene ID" value="PHAVU_003G250900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2759">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HSGHLRW"/>
    <dbReference type="OrthoDB" id="10263554at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000221">
        <property type="term" value="C:vacuolar proton-transporting V-type ATPase, V1 domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.150:FF:000004">
        <property type="entry name" value="V-type proton ATPase subunit H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.150">
        <property type="entry name" value="V-type ATPase, subunit H, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004908">
        <property type="entry name" value="ATPase_V1-cplx_hsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011987">
        <property type="entry name" value="ATPase_V1-cplx_hsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038497">
        <property type="entry name" value="ATPase_V1-cplx_hsu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018506">
        <property type="entry name" value="Cyt_B5_heme-BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10698">
        <property type="entry name" value="V-TYPE PROTON ATPASE SUBUNIT H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10698:SF0">
        <property type="entry name" value="V-TYPE PROTON ATPASE SUBUNIT H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11698">
        <property type="entry name" value="V-ATPase_H_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03224">
        <property type="entry name" value="V-ATPase_H_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032184">
        <property type="entry name" value="ATPase_V1_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00191">
        <property type="entry name" value="CYTOCHROME_B5_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="5 7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATPase V1 complex subunit H C-terminal" evidence="8">
        <location>
            <begin position="368"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR032184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF11698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW28003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="491" mass="56096" checksum="40A5431F1E3FFC84" modified="2014-02-19" version="1">MDQAELTTEQVLSRDIPWETYMSTKLISSTSLQLLRRYDHRSESHRAQLLDDDGPSYVRVFVRVLRDIFKEDTVEYVLALIDEMLAANPKRGRLFHDSTLADEDTYEPFLSETRHTHMTGFCIEYPVICFSNWVLNKLNTLVYVHSDSYQLLWKGNWFIQEKSCKILALIVSVRPKNQNGVVSNGDASDGKKPFTTIDDVLIGLVKWLCEQLKKPFHPTRGVPTAINCLSTLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVIVLTLKNLMSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDMYKQEVLLGHLDWSPMHKDPIFWRENITNFEENDFQIPRVLITILDTSSDPRTLAVACYDISQFIQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGY6</accession>
    <name>V7CGY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G295700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGY6"/>
    <dbReference type="SMR" id="V7CGY6"/>
    <dbReference type="Gramene" id="ESW28545">
        <property type="protein sequence ID" value="ESW28545"/>
        <property type="gene ID" value="PHAVU_003G295700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNTIDDS"/>
    <dbReference type="OrthoDB" id="767661at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47262">
        <property type="entry name" value="OS02G0132600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47262:SF1">
        <property type="entry name" value="OS02G0132600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="489"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="818"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="834"/>
            <end position="844"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="844" mass="96184" checksum="7D2BF4E6F24CC4E0" modified="2014-02-19" version="1">MRAPTVRNLCTLSALFRSRLTRNPNTKVETFRKPSSEFEVGFGSELQHSSEFDLPRDSSRGDLVDEDVQVSALLCSKQDKGSGYDEVDHEEKRKSAVAIPWLPDLSHGKLLAKRELVRERKSKCISKYSRTHRFHRLIKLCADKLGTTQAVNVLGQLGRKTGVNEYNALIKVCVQKARVTDDEYIALSEMSKAFHLFKSMRDCGYPLEEQTYDPLLRYIIDMGLVQEFQLFSDFIKAENPGLASRLGYYEMLLWLRVDNEEMIRDICEFITVDDREDTSALRVSYLMALCESDRKMQLLDVVKNIDIIKLLSVESIENIFQSLRRLQLESVAEDILLDLRARDHDADNISNFIVSYAVGIPNLAVEDIITKVNNMHGILEVLPSRSSYEKLILHFCGLDKVGDALDIVEQMCNAGFYLSTGVLQFILQICEESYEYILVYQIHSIVCRYHLELNGEIARCLVHFCVRIKDFEGAYKIIGDLEEMNFKPTTNMYNAIMAGYFREKNISDGLRVLKHMQVANVQPDSQTFCYLIHNCETEEDIMKYCEEMKQYQIHATKEVFMALVNSYAACGKLEKAKQVVLDLKLPKKALIEIKSVLVVALASHGQLSEAFLVYEQIKTAGHNLEPKAVTCLIEELTQHNGELDRLLLLLKEVNDLDYWVDVCFKVILYCARNKNLSTAILLLKQLKDKFENDEIVMEALFDAVFVIAASESTHLQIGLDLLWAIKDELDLMPSRQCLDFLLSACAKARDLNNARLIWREYQIAGFPYNVLSYLRMYQALLAAGDARSASLMLKKIPRDDAEVCSVIIACQETYSSVGEKKKQGKSKGRKSKDLNTSSSDMCSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGZ9</accession>
    <name>V7CGZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G068200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGZ9"/>
    <dbReference type="SMR" id="V7CGZ9"/>
    <dbReference type="STRING" id="3885.V7CGZ9"/>
    <dbReference type="Gramene" id="ESW29409">
        <property type="protein sequence ID" value="ESW29409"/>
        <property type="gene ID" value="PHAVU_002G068200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLHKYTQ"/>
    <dbReference type="OrthoDB" id="10263751at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050620">
        <property type="entry name" value="Thioredoxin_H-type-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438:SF463">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="1"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15457" checksum="9E5A471C3BD96FAB" modified="2014-02-19" version="1">MAPTIYNFKSFRSSGSFHYSTPKTDSNSNLLTFHSTDKWNAHFKAVKETNKLMVLDFTATWCGPCKLMDQVLQDLSAEYTDAEFIKIDVEELNEVSQALQVNQLPTFVLVKKGKIVDRVVGVKKEELKRSVGNHIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHN9</accession>
    <name>V7CHN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Mitochondrial carnitine/acylcarnitine carrier-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G285400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHN9"/>
    <dbReference type="SMR" id="V7CHN9"/>
    <dbReference type="STRING" id="3885.V7CHN9"/>
    <dbReference type="Gramene" id="ESW28426">
        <property type="protein sequence ID" value="ESW28426"/>
        <property type="gene ID" value="PHAVU_003G285400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0758">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HICRLRY"/>
    <dbReference type="OrthoDB" id="14252at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031966">
        <property type="term" value="C:mitochondrial membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000064">
        <property type="term" value="F:L-ornithine transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990575">
        <property type="term" value="P:mitochondrial L-ornithine transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.40.10:FF:000050">
        <property type="entry name" value="mitochondrial carnitine/acylcarnitine carrier-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050567">
        <property type="entry name" value="Mitochondrial_Carrier"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45624:SF60">
        <property type="entry name" value="CARNITINE_ACYLCARNITINE CARRIER-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45624">
        <property type="entry name" value="MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="2"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="102"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="208"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW28426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="297" mass="30959" checksum="B33329ADA0BC1DD3" modified="2014-02-19" version="1">MGDVAKDLAAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTVALEGPRGLYKGMGVPLATVAAFNAVLFTVRGQMETLVRSNPGVPLTVNQQFVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLKSEGGTRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGSTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIKASQGFKGLYKGFGPAMARSIPANAACFLAYEMTKSALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIC5</accession>
    <name>V7CIC5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G112500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. RAF subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIC5"/>
    <dbReference type="SMR" id="V7CIC5"/>
    <dbReference type="STRING" id="3885.V7CIC5"/>
    <dbReference type="Gramene" id="ESW29952">
        <property type="protein sequence ID" value="ESW29952"/>
        <property type="gene ID" value="PHAVU_002G112500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEVRCVQ"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7CIC5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04928">
        <property type="entry name" value="ACT_TyrKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13999">
        <property type="entry name" value="STKc_MAP3K-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000316">
        <property type="entry name" value="serine/threonine-protein kinase HT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000060">
        <property type="entry name" value="Serine/threonine-protein kinase isoform 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051681">
        <property type="entry name" value="Ser/Thr_Kinases-Pseudokinases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329:SF151">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE STY17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00109">
        <property type="entry name" value="TYRKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="13">
        <location>
            <begin position="183"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="296"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="323"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW29952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="572" mass="64745" checksum="5E8B4733FE92F9F6" modified="2014-02-19" version="1">MVIEHDIESCGSRAVQLSHASHPRHQRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYADSIHSDPSEIEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTTKNNIEDGGSAMSVTPYFHRPMHEITFSTVDKPKLLSQLTSILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLEKEIYKVKEQNMSNQGIHYAANEHYQTRIEPSPHCIQIPTDGADVWELDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKTTHPKLSELLQRCWQQDPTLRPDFSETIEILQLIAKEVNDHKDKSPHGFLSALRRVHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ12</accession>
    <name>V7CJ12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G057300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ12"/>
    <dbReference type="STRING" id="3885.V7CJ12"/>
    <dbReference type="Gramene" id="ESW29274">
        <property type="protein sequence ID" value="ESW29274"/>
        <property type="gene ID" value="PHAVU_002G057300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29275">
        <property type="protein sequence ID" value="ESW29275"/>
        <property type="gene ID" value="PHAVU_002G057300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW2P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEGGFFP"/>
    <dbReference type="OrthoDB" id="1897931at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010305">
        <property type="term" value="P:leaf vascular tissue pattern formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010087">
        <property type="term" value="P:phloem or xylem histogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013666">
        <property type="entry name" value="PH_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040269">
        <property type="entry name" value="VAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008546">
        <property type="entry name" value="VAN3-bd-like_auxin_canal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31351">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31351:SF24">
        <property type="entry name" value="VAN3-BINDING PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05703">
        <property type="entry name" value="Auxin_canalis"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08458">
        <property type="entry name" value="PH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VAN3-binding protein-like auxin canalisation" evidence="1">
        <location>
            <begin position="40"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="VAN3-binding protein-like auxin canalisation" evidence="1">
        <location>
            <begin position="100"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="domain" description="Pleckstrin-like plant" evidence="2">
        <location>
            <begin position="272"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="393" mass="43239" checksum="6C67B2A88A2FEA4C" modified="2014-02-19" version="1">MEGGFFPPWKNGSWLELASEDVQESEQFKLVSSLPPLAEPPTPREPMEFLSRSWSLSASEISKALSEKQKQAFLDTSADTLQEPISASQLAGGRIIVSGNCRRMGAIGKWLHQKQYGSTNVTVKKKDRARAENARVHSALSIAGLASAVAAVAATEDPRGGCRSKLDVALASATQLLASYCVEMAELAGADRERVAATVRSAVDIQTPGDLMTFTAAAATALRGEAALTARLPKEAKKNASISPYDKVIAEPHWLRAFDGQMLERHPPCLGDLLQLTEKGTLRWRHVHVYIKKCQVKIKIKSKHVGGAFSKKNKCVVYGVCDKDNAWPYRKEREASEELYFGLKTAQGLLEFKCQNKLHKQKWVDGIDMLLRRVNTVEATEHSLEYLSISSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJY7</accession>
    <name>V7CJY7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Small ribosomal subunit protein uS10 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G051100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJY7"/>
    <dbReference type="SMR" id="V7CJY7"/>
    <dbReference type="STRING" id="3885.V7CJY7"/>
    <dbReference type="Gramene" id="ESW29196">
        <property type="protein sequence ID" value="ESW29196"/>
        <property type="gene ID" value="PHAVU_002G051100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0900">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCEYRRR"/>
    <dbReference type="OrthoDB" id="10248551at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.600:FF:000002">
        <property type="entry name" value="40S ribosomal protein S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.600">
        <property type="entry name" value="Ribosomal protein S10 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_uS10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_uS10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018268">
        <property type="entry name" value="Ribosomal_uS10_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027486">
        <property type="entry name" value="Ribosomal_uS10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036838">
        <property type="entry name" value="Ribosomal_uS10_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005729">
        <property type="entry name" value="Ribosomal_uS10_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01046">
        <property type="entry name" value="uS10_euk_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11700">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00338">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00971">
        <property type="entry name" value="RIBOSOMALS10"/>
    </dbReference>
    <dbReference type="SMART" id="SM01403">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54999">
        <property type="entry name" value="Ribosomal protein S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00361">
        <property type="entry name" value="RIBOSOMAL_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS10" evidence="4">
        <location>
            <begin position="24"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW29196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="122" mass="13698" checksum="FCF1D4C0C35DD02F" modified="2014-02-19" version="1">MAYAAMKPTKPGLEESEEQIHKIRITLSSKNVKNLEKVCADLVRGARDKRLRVKGPVRMPTKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMG6</accession>
    <name>V7CMG6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G162600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMG6"/>
    <dbReference type="STRING" id="3885.V7CMG6"/>
    <dbReference type="Gramene" id="ESW30553">
        <property type="protein sequence ID" value="ESW30553"/>
        <property type="gene ID" value="PHAVU_002G162600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S708">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEMFRIS"/>
    <dbReference type="PhylomeDB" id="V7CMG6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009424">
        <property type="entry name" value="AGP16/20/22/41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33374">
        <property type="entry name" value="ARABINOGALACTAN PROTEIN 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06376">
        <property type="entry name" value="AGP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757910" evidence="2">
        <location>
            <begin position="32"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="7702" checksum="56995AAEEF26BB71" modified="2014-02-19" version="1">MAIFRFSFGFGLLALLLSLIFTLYVPLSAHAQSLPPAPPPTSDGTSIDQGVAYVLMMLALALTYLIHSSSVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP75</accession>
    <name>V7CP75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Exostosin GT47 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G281100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 47 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP75"/>
    <dbReference type="STRING" id="3885.V7CP75"/>
    <dbReference type="Gramene" id="ESW31944">
        <property type="protein sequence ID" value="ESW31944"/>
        <property type="gene ID" value="PHAVU_002G281100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1021">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KFHRSEH"/>
    <dbReference type="OrthoDB" id="1924787at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010417">
        <property type="term" value="P:glucuronoxylan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009834">
        <property type="term" value="P:plant-type secondary cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004263">
        <property type="entry name" value="Exostosin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040911">
        <property type="entry name" value="Exostosin_GT47"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11062">
        <property type="entry name" value="EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11062:SF227">
        <property type="entry name" value="GLUCURONOSYLTRANSFERASE OS02G0520750-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03016">
        <property type="entry name" value="Exostosin_GT47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755954" description="Exostosin GT47 domain-containing protein" evidence="6">
        <location>
            <begin position="22"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="domain" description="Exostosin GT47" evidence="7">
        <location>
            <begin position="49"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="416" mass="47321" checksum="E704436B5D2A91C6" modified="2014-02-19" version="1">MGMRKLSFLGFLCAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFIYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYSTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDVSTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEKVPNLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKFLNWTAGPVGDLKPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQF2</accession>
    <name>V7CQF2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Aldehyde dehydrogenase 1</fullName>
            <ecNumber evidence="6">1.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G314000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>an aldehyde + NAD(+) + H2O = a carboxylate + NADH + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:16185"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.2.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>octanal + NADP(+) + H2O = octanoate + NADPH + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:59904"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17935"/>
            <dbReference type="ChEBI" id="CHEBI:25646"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:59905"/>
        </physiologicalReaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion matrix</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.3" evidence="6"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQF2"/>
    <dbReference type="SMR" id="V7CQF2"/>
    <dbReference type="STRING" id="3885.V7CQF2"/>
    <dbReference type="Gramene" id="ESW32339">
        <property type="protein sequence ID" value="ESW32339"/>
        <property type="gene ID" value="PHAVU_002G314000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2450">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNFPLDM"/>
    <dbReference type="OrthoDB" id="310895at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004029">
        <property type="term" value="F:aldehyde dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.605.10:FF:000011">
        <property type="entry name" value="ALD5p Mitochondrial aldehyde dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.605.10:FF:000026">
        <property type="entry name" value="Aldehyde dehydrogenase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.309.10:FF:000065">
        <property type="entry name" value="Aldehyde dehydrogenase3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11699">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldehyde dehydrogenase" evidence="12">
        <location>
            <begin position="31"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00049194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00068140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="501" mass="54427" checksum="ED1199EF8B42F770" modified="2014-02-19" version="1">MAALNNGDSASVNKLPSVKFTKLFINGEFQDSVSGKTFESIDPRTGDVIARISEGDKEDVDIAVRAARYAFDFGPWPRMSGADRGKILMKWAELIDEHAEELATLDAIDAGKLYHICKNLEVPAAANTLRYYAGAADKVHGEVLKMSRQFHAYTLLEPVGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVVKPAEQTPLSALYNAHLAKLAGIPDGVVNVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAVELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKREGATLLTGGKTVGNKGYFIEPTIFSDIKEDMLIAQDEIFGPVMALKKFKTIDEAIKSANNTKYGLAAGIVTKNLDTANTLSRSIRAGTVWINCYLAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQM9</accession>
    <name>V7CQM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G2555001g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily. ABCD family. Peroxisomal fatty acyl CoA transporter (TC 3.A.1.203) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQM9"/>
    <dbReference type="STRING" id="3885.V7CQM9"/>
    <dbReference type="Gramene" id="ESW31643">
        <property type="protein sequence ID" value="ESW31643"/>
        <property type="gene ID" value="PHAVU_002G2555001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0060">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GYLMASM"/>
    <dbReference type="OrthoDB" id="422637at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005778">
        <property type="term" value="C:peroxisomal membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005324">
        <property type="term" value="F:long-chain fatty acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015910">
        <property type="term" value="P:long-chain fatty acid import into peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007031">
        <property type="term" value="P:peroxisome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042760">
        <property type="term" value="P:very long-chain fatty acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03223">
        <property type="entry name" value="ABCD_peroxisomal_ALDP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050835">
        <property type="entry name" value="ABC_transporter_sub-D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11384">
        <property type="entry name" value="ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11384:SF59">
        <property type="entry name" value="LYSOSOMAL COBALAMIN TRANSPORTER ABCD4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06472">
        <property type="entry name" value="ABC_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="149"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="471"/>
            <end position="703"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="50"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="57"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="775"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW31643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="775" mass="86856" checksum="D5AC3E781E0FEFD3" modified="2014-02-19" version="1" fragment="single">MSSLQLFQLTQHGQGFLASRRKTLLLATGILVAGGTAAYVQSRVNRHDLLGDSGENNNDRELPKEEVMKRTSAPKDKKKKGGLKSLKVLAAILLSEMGQLGAKNLLALVCIVVLRTTLSNRLAKVQGFLFRAAFLRRVPMFLRLISENIVLCFLSSTILSTSKYITGTLSLHFRKILTQFIHSHYFKNMVYYKISHVDGRITNPEQRIASDVPRFCSELSEIIQDDLTAVTDGLLYSWRLCSYASPKYIFWILAYVVGAGAAIRNFSPAFGKLMSREQELEGEYRQLHSRLRTHSESIAFYGGERREEAYIQQKFRTLFRHTKRVLHDHWWFGMVQDFLLKYLGATVAVILIIEPFFSGHLRPDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISARRLNRLSGYADRIHELMAISRELSLENEKFSLQRQGSRNCISEANYVGFYGVKASKLSELFMNLYFSLCFSYLDRVDAPKIQVVTPNGNVLVDDLTLKVESGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTVDQEVEPLTDGGMVELLKNVDLEYLLERYPPEKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVLAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHHRSEDSSTELQNNAMKALETKRQSDAKAVQRAFAMNKKDSAFSNSNAQSYITEVIASSPSMKDTTSSAVPQLCGNSRALPMRVAAMCKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQQ0</accession>
    <name>V7CQQ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ribosomal RNA-processing protein 17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G222700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RRP17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQQ0"/>
    <dbReference type="SMR" id="V7CQQ0"/>
    <dbReference type="STRING" id="3885.V7CQQ0"/>
    <dbReference type="Gramene" id="ESW31251">
        <property type="protein sequence ID" value="ESW31251"/>
        <property type="gene ID" value="PHAVU_002G222700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4709">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYDNGDM"/>
    <dbReference type="OrthoDB" id="551633at2759"/>
    <dbReference type="PhylomeDB" id="V7CQQ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019186">
        <property type="entry name" value="Nucleolar_protein_12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14577">
        <property type="entry name" value="NUCLEOLAR PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14577:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09805">
        <property type="entry name" value="Nop25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="38"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="118"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="38"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="61"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="123"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="151"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="183" mass="21468" checksum="A55C9ECFB7184756" modified="2014-02-19" version="1">MEETVQRKGAHLKKRALKNKALGISFDEKDLKDYVTGFHKRKKKRRKEAQKQQNEALRRKRSEERKKRKLEREYVQYGVVPPDQNEERQEEVADQVESIAETKTYQSGDLKVTVVTSEINPEEESHHSERKEETVTPHSVVADKRQGVRISNKKPFKKVAKQKSRPKPANKRDKKKGKKRGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRH7</accession>
    <name>V7CRH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-CH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G275300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRH7"/>
    <dbReference type="SMR" id="V7CRH7"/>
    <dbReference type="STRING" id="3885.V7CRH7"/>
    <dbReference type="Gramene" id="ESW31870">
        <property type="protein sequence ID" value="ESW31870"/>
        <property type="gene ID" value="PHAVU_002G275300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1609">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RAISHRY"/>
    <dbReference type="OrthoDB" id="1900797at2759"/>
    <dbReference type="PhylomeDB" id="V7CRH7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46214:SF12">
        <property type="entry name" value="RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46214">
        <property type="entry name" value="ZINC FINGER, RING-CH-TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12906">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51292">
        <property type="entry name" value="ZF_RING_CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="269"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="304"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="335"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="RING-CH-type" evidence="6">
        <location>
            <begin position="102"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="360" mass="39182" checksum="51A6ED06757FFE7C" modified="2014-02-19" version="1">MGRENDLARTKEEVSDDGSSTLENGDLESHARISLDKEGLETCRVCQCTESDKRADAALEFLGITPGSELCKSKGEVGCDGNGIPRNMSLNRNIENNTGMVEFVSPDGEVFICKSDLELGLSHQDKLIELGCSCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRVSDFNKVVGALKEYEVLRERTASGDPGLAQARANAGVDPDAVAAIRRQRLSEIALWFCPHNSSTNNNVSNVDTLSQVASEQPLSIVTEDVVPVQNTATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALAVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRS4</accession>
    <name>V7CRS4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G025900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRS4"/>
    <dbReference type="STRING" id="3885.V7CRS4"/>
    <dbReference type="Gramene" id="ESW32887">
        <property type="protein sequence ID" value="ESW32887"/>
        <property type="gene ID" value="PHAVU_001G025900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ84">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TMYNAYA"/>
    <dbReference type="OrthoDB" id="2012654at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006873">
        <property type="entry name" value="DUF620"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31300">
        <property type="entry name" value="LIPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31300:SF31">
        <property type="entry name" value="PUTATIVE (DUF620)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04788">
        <property type="entry name" value="DUF620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="19"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="473" mass="51889" checksum="32AFBFA9D5706411" modified="2014-02-19" version="1">MERKQGFFSALKDEVVRGLSPARSRAKSPARSSSPMSSLLRRRRKHHAPPPELFIARSGSLRPTEALSPLKEGPDGTDGHDSTRGEGRWGQWMKGPLARAPSVSSSSSSSSSCKKSDLRLLLGVLGAPLAPVHVCTTDPFPHLSIKDIPIETSSAQYILQQYIAASGGQKLQNSINNAYAMGKVRMIASEFETANKVTRSRNSSKAAESGGFVLWQMNPDMWYVELALGGSKVHAGCNGRLVWRHTPWLGAHAAKGPVRPLRRALQGLDPRTTASMFINARCIGEKKINEEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDAVYWETTINSFLDDYRPVEGIMIAHSGRSVVTLFRFGETAMSHTKTRMEEAWTIEEVAFNVPGLSLDCFIPPSELRFASMSEACELPKGQRVKTAVAAAAYHAKVAQLQKSHEGNTNNINWTVDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS55</accession>
    <name>V7CS55_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glutaredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G036900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutaredoxin family. CC-type subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS55"/>
    <dbReference type="SMR" id="V7CS55"/>
    <dbReference type="STRING" id="3885.V7CS55"/>
    <dbReference type="Gramene" id="ESW33022">
        <property type="protein sequence ID" value="ESW33022"/>
        <property type="gene ID" value="PHAVU_001G036900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1752">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTHGGIP"/>
    <dbReference type="OrthoDB" id="418495at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd03419">
        <property type="entry name" value="GRX_GRXh_1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011905">
        <property type="entry name" value="GlrX-like_pln_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02189">
        <property type="entry name" value="GlrX-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10168">
        <property type="entry name" value="GLUTAREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="6">
        <location>
            <begin position="56"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW33022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="16070" checksum="41745C3B36E161B2" modified="2014-02-19" version="1">MQGLRRCSNDVVHLDLTTPTPATTNSSTTSSSSSLSIDVEESTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEITALPDATRTPAVFIGGASVGGLESLVALHVSGHLVPKLIQVGALWLLGWRWRVLALCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTM1</accession>
    <name>V7CTM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Beta-galactosidase</fullName>
            <ecNumber evidence="3 7">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G010900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 35 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3 7"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTM1"/>
    <dbReference type="SMR" id="V7CTM1"/>
    <dbReference type="STRING" id="3885.V7CTM1"/>
    <dbReference type="Gramene" id="ESW32708">
        <property type="protein sequence ID" value="ESW32708"/>
        <property type="gene ID" value="PHAVU_001G010900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0496">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MWGDLIQ"/>
    <dbReference type="OrthoDB" id="1657402at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000061">
        <property type="entry name" value="Beta-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000076">
        <property type="entry name" value="Beta-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000142">
        <property type="entry name" value="Beta-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000021">
        <property type="entry name" value="Beta-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048913">
        <property type="entry name" value="BetaGal_gal-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041392">
        <property type="entry name" value="GHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031330">
        <property type="entry name" value="Gly_Hdrlase_35_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019801">
        <property type="entry name" value="Glyco_hydro_35_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001944">
        <property type="entry name" value="Glycoside_Hdrlase_35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23421">
        <property type="entry name" value="BETA-GALACTOSIDASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21467">
        <property type="entry name" value="BetaGal_gal-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17834">
        <property type="entry name" value="GHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01301">
        <property type="entry name" value="Glyco_hydro_35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00742">
        <property type="entry name" value="GLHYDRLASE35"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01182">
        <property type="entry name" value="GLYCOSYL_HYDROL_F35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756148" description="Beta-galactosidase" evidence="9">
        <location>
            <begin position="27"/>
            <end position="739"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase 35 catalytic" evidence="10">
        <location>
            <begin position="35"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-galactosidase beta-sandwich" evidence="11">
        <location>
            <begin position="362"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-galactosidase galactose-binding" evidence="12">
        <location>
            <begin position="621"/>
            <end position="705"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF21467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="739" mass="82230" checksum="23F107D19AEF2AC0" modified="2014-02-19" version="1">METNSVSKLLLLVFTIFFVGSELIHCSVTYDRKAIIINGQRRILISGSIHYPRSAPEMWEDLIRKAKDGGLDAIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQRVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESKQLGGAGYAYTNWAAKMAVGLNTGVPWVMCKQDDAPDPVINACNGFYCDYFSPNKPYKPNLWTESWSGWFTEFGGPIYQRPVQDLAFAVARFIQKGGSYINYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLMDLHKAIKQSERALVSSDPTVTSLGSYEQAHVFSSKSGACAAFLANYHSNSAARVTFNNRKYDLPPWSISILPDCKTDVFNTARVRFQTTKIQMLPSNSKLFSWETYDEDVSSLEESSKITASGLLEQLNVTRDTSDYLWYITSVDISASESFLRGGNKPSISVNSAGHAVHVFINGQFSGSAFGTSADRTCTFNGPVNLRSGTNKIALLSVAVGLPNVGFHFETWKAGITGVLLHGLDHGQKDLTWQKWSYQIGLKGEAMNLVSPNGVSSVDWVGDSLGVQSQSQLKWHKAYFNAPDGVEPLALDLSSMGKGQVWINGQGIGRYWMVYAKGACNSCNYAGTYRPAKCQLGCGQPTQQWYHVPRSWLKPTHNLIVVLEELGGNPWKISLQKRTIHTPASSEPNSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTQ8</accession>
    <name>V7CTQ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GYF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G015100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32758">
        <property type="protein sequence ID" value="ESW32758"/>
        <property type="gene ID" value="PHAVU_001G015100g"/>
    </dbReference>
    <dbReference type="OMA" id="DWNDPSA"/>
    <dbReference type="OrthoDB" id="6415790at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00072">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47471">
        <property type="entry name" value="GYF DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47471:SF1">
        <property type="entry name" value="PROTEIN ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02213">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00444">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GYF" evidence="2">
        <location>
            <begin position="466"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="309"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="958"/>
            <end position="983"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1062"/>
            <end position="1130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1146"/>
            <end position="1167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1245"/>
            <end position="1289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1322"/>
            <end position="1570"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1672"/>
            <end position="1694"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="90"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="174"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="342"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="359"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1077"/>
            <end position="1092"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1146"/>
            <end position="1156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1251"/>
            <end position="1274"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1275"/>
            <end position="1289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1324"/>
            <end position="1334"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1428"/>
            <end position="1437"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1452"/>
            <end position="1477"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1479"/>
            <end position="1489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1511"/>
            <end position="1524"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1550"/>
            <end position="1560"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1682"/>
            <end position="1692"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1717" mass="188283" checksum="F418BEDE44551833" modified="2014-02-19" version="1">MVLNPPFGHQSDTVKTSGNGEDVHDVHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKEVGDSRRVDRWTDNMTARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGLSNISSQGKDEKEGDHYRPWRSNYSQSRGRVDPSHTTPNKPVSTFSYGRGRGENTPPVSSIGHGRVGSLGSPLSSTYLGTALEKVHSGHEELSPLKYNRTKLLDVYRVTGMGTNRKLVEDFVHVPNLTQDEPLEPLAILAPNPEELSVLNGIDKGEIISSSAPQVPKDGRSSSDFTHTRRMKPGSAPFQDRGEDGGSYKVPEEVSTNKDSSFEGNTSAVHPGAPWRTMPVVDHATQFHDSRDITNDLRLRKTDINSHQPKDPHNQWENNLGYLPDSKEVGKWQASEDPVIKRQLSGILDSELETRRVQQTVPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDFTDIPGRQISGTFGNTLTGLNEVDILRSDSRHRPNPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFMGNNPGNMGPSGVDNGNNLYLLAKRMALERQRSLPTPYPYWPGRDAASFAPKADVVPDASLHSKLLSSGSDNSRQPPSQNSELMSIIQGLSDRTSAGQNNGAAGWPNYPLQGALDPLQNKIDLLHDPNFPQMPFGIQQQRLPAQNQLSLSNLLSQAAADTPNNALAAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAASQAPQIPLIDKLLLLKQQQKQEEQQQLLRQQQQLLSQVLHDQQSSQLFSNLSYGQLQGVLPIGNLRVDPSQVQPQEIFPMSSQAPIPNAHNEHNSNSLNLPPKVSQDTSFNVSSEASIRLPHQFFGDTHHPENWVPNLTEQINDQYQKESFPVSSTHVDGSPLLDQNKSKEEPLVVPLSSSDYTAKSVEQLLPSNFRPDAGVLASTSKSGEKSGHLESFASNIALSTVGSNVSPPVSGPGMEVKAKLDIVYQEQHAGRDSTLSEPSLGDMRKVEGQEPKKASEKKSKKQKSTKSQSFDQTKGVVKNVTLQPSKQTEAEMPKLSDFGEAKMDESLNDMQQTRVKGTRTGSAVPEAGGWPDIITGKITETVDAGEANAASSFLTQKTEVSAGRAWKPAPGFKPKSFLEIQQEEQRKAETEILVSDVAVSVNSMSLASPWAGVVSNPDSVKVSSESANGGGNTENSVKSETSENVKSKKSPLHDLLAEEVLKKSNEIYAEVPDSIFPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGSKASLPIASSDVPIASSPNEKGKSSRWAQQEKEELPVIPAGPSLGDFVLWKGEREPPSSSPSPAWSTDSGKVPKPTSLRDILKEQEKKASSAIPVSPVPPPQKSQPTQSTRNSASSWSVSASSPSKAASPIQLNTQASQSKYKGDDDLFWGPMEQSKQDSKQSDFPQLASQGTGSKNIPLRGNSPGLLTRQKSVSGKPTERSLASSPASSQSMQKLKKDAMTKHSEATDFRDWCESECVRLIGSKDTSFLEFCLKQSRSEAELLLTENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQNRNDKKVARPGVARTASANADIQDVEYSEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUB7</accession>
    <name>V7CUB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G092300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUB7"/>
    <dbReference type="STRING" id="3885.V7CUB7"/>
    <dbReference type="Gramene" id="ESW33709">
        <property type="protein sequence ID" value="ESW33709"/>
        <property type="gene ID" value="PHAVU_001G092300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S73T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AVHIHIY"/>
    <dbReference type="OrthoDB" id="652307at2759"/>
    <dbReference type="PhylomeDB" id="V7CUB7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021775">
        <property type="entry name" value="DUF3339"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128">
        <property type="entry name" value="OS05G0103400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128:SF6">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11820">
        <property type="entry name" value="DUF3339"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="7597" checksum="2E0EB12DCC06E329" modified="2014-02-19" version="1">MSDWAPVLIGVVLFVLLQPGLLFSFPGNGKQLEFGSMKTNGKAIFIHTLIFFALYSILILAVKVHIYTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVL3</accession>
    <name>V7CVL3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ENTH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G032700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">Clathrin-coated vesicle</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the epsin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVL3"/>
    <dbReference type="SMR" id="V7CVL3"/>
    <dbReference type="STRING" id="3885.V7CVL3"/>
    <dbReference type="Gramene" id="ESW32966">
        <property type="protein sequence ID" value="ESW32966"/>
        <property type="gene ID" value="PHAVU_001G032700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2056">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNDAIMN"/>
    <dbReference type="OrthoDB" id="4033880at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030125">
        <property type="term" value="C:clathrin vesicle coat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030276">
        <property type="term" value="F:clathrin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005543">
        <property type="term" value="F:phospholipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006897">
        <property type="term" value="P:endocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03571">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.90:FF:000006">
        <property type="entry name" value="Clathrin interactor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013809">
        <property type="entry name" value="ENTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276:SF45">
        <property type="entry name" value="CLATHRIN INTERACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276">
        <property type="entry name" value="EPSIN/ENT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01417">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00273">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50942">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="4" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENTH" evidence="7">
        <location>
            <begin position="20"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="174"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="426"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="501"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="174"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="198"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="252"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="290"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="426"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="439"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="6">
        <location>
            <begin position="523"/>
            <end position="533"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="563" mass="60540" checksum="DCAA063D43128AF0" modified="2014-02-19" version="1">MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEISQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHDVRNKAAANRDKYIGVSSSGITYKSGGSSSYSSGGSFQSSGKYGGFGSRDGDRFGDNNRDKVGSYDEDYQGKSHHSVASDNQDYSFKKGSSRSVSKSQENKSSRVSKSSTNANNYGSVPSQSSSVPANNTEDEMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDFMDAPTSVPVEKPATGNLPEVDLFADASFVSATPQMDKGASSQPQAEVDLFASQPAISAVTPTVDLFSIPEPVVQPDSKPEKSDPVNNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSDKVVSDDKHDNITGKSLADSKVLPKKDTFQVKSGVWADSLSRGLIDLNITAPKKVNLADVGIVGGLSDGSDEKEKGPPPSFFMGRAMGSGSGLGLGRPGFSPSQPAPGDDIFSNLGTQQYQFGGFQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVQ1</accession>
    <name>V7CVQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific lipid-transfer protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G062300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVQ1"/>
    <dbReference type="SMR" id="V7CVQ1"/>
    <dbReference type="STRING" id="3885.V7CVQ1"/>
    <dbReference type="Gramene" id="ESW33350">
        <property type="protein sequence ID" value="ESW33350"/>
        <property type="gene ID" value="PHAVU_001G062300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAI7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSANTDC"/>
    <dbReference type="OrthoDB" id="1403824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01960">
        <property type="entry name" value="nsLTP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00234">
        <property type="entry name" value="Tryp_alpha_amyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00382">
        <property type="entry name" value="LIPIDTRNSFER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00597">
        <property type="entry name" value="PLANT_LTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756155" description="Non-specific lipid-transfer protein" evidence="4">
        <location>
            <begin position="22"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="5">
        <location>
            <begin position="30"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW33350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="121" mass="13194" checksum="3C2A6CA2574FFADD" modified="2014-02-19" version="1">MKSVYVPFLSLVAVLVLTVAATEPPKALTCEETKSLVTPCLDFLTDKTNTPPTPCCQGLNKLIVSTPTKEEKLAACKCLKEAASHIPNFDVGRVNNLPKVCNINVNYPISKDFDCENIIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVR1</accession>
    <name>V7CVR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">magnesium chelatase</fullName>
            <ecNumber evidence="2">6.6.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_001G132200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>protoporphyrin IX + Mg(2+) + ATP + H2O = Mg-protoporphyrin IX + ADP + phosphate + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:13961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60492"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.6.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the Mg-chelatase subunit H family.</text>
    </comment>
    <dbReference type="EC" id="6.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CVR1"/>
    <dbReference type="STRING" id="3885.V7CVR1"/>
    <dbReference type="Gramene" id="ESW34189">
        <property type="protein sequence ID" value="ESW34189"/>
        <property type="gene ID" value="PHAVU_001G132200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT3B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPETIAC"/>
    <dbReference type="OrthoDB" id="10252009at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016851">
        <property type="term" value="F:magnesium chelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10150">
        <property type="entry name" value="CobN_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011771">
        <property type="entry name" value="BchH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003672">
        <property type="entry name" value="CobN/Mg_chltase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022571">
        <property type="entry name" value="Mg_chelatase_H_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02025">
        <property type="entry name" value="BchH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF009140">
        <property type="entry name" value="PRK12493.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44119">
        <property type="entry name" value="MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44119:SF1">
        <property type="entry name" value="MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02514">
        <property type="entry name" value="CobN-Mg_chel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11965">
        <property type="entry name" value="DUF3479"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Magnesium chelatase subunit H N-terminal" evidence="11">
        <location>
            <begin position="79"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="CobN/magnesium chelatase" evidence="10">
        <location>
            <begin position="244"/>
            <end position="1361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF11965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW34189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1381" mass="153204" checksum="DAA0123B0A475D68" modified="2014-02-19" version="1">MASLVSSSFTLPSSKPDQLHSLAQKHLFLHSFLPKKTGYNGSSKSSLRVKCIGNGLFTQTTQEVRRIIPENDQNLPTVKIVYVVLEAQYQSSLTAAVLALNSKRKHASFEVVGYLVEELRDASTYKAFCKDLEDANVFIGSLIFVEELALKIKTAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMITGSYIPALKGAKIEYSEPVLYLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDEGHYVAVIMEMEARGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGVHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCVRAIKWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVMKELKRDGYNVEGLPETPEALIEEVIHDKEAQFSSPNLNIAYKMNVREYQNLTPYSTALEENWGKPPGNLNADGENLLVYGKQYGNIFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAFYSYVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTARQCNLDKDVTLPDEGVEISPKERDLVVGKVYSKIMEIESRLLPCGLHIIGEPPSALEAVATLVNIAALDRPEDGISSLPGILADTVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNDKGQVVDVAGKLTSILGFGINEPWIQYLSDTKFYRADREKLRTLFMFLGDCLKLVVADNEVGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVERLIERQKAENGGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVMPVADAFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNYVRKHASEQAQALGVDVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDSDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYVADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEKMLNKLMNTNPNSFRKLVQTFLEANGRGYWETSEDNIEKLKQLYSEVEDKIEGIDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVU2</accession>
    <name>V7CVU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G134900g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be involved in environmental stress response.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVU2"/>
    <dbReference type="SMR" id="V7CVU2"/>
    <dbReference type="STRING" id="3885.V7CVU2"/>
    <dbReference type="Gramene" id="ESW34224">
        <property type="protein sequence ID" value="ESW34224"/>
        <property type="gene ID" value="PHAVU_001G134900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3183">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRDCLED"/>
    <dbReference type="OrthoDB" id="431929at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1110.10:FF:000003">
        <property type="entry name" value="AN1-type zinc finger protein 2B isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1110.10">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035896">
        <property type="entry name" value="AN1-like_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041697">
        <property type="entry name" value="Znf-C2H2_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057357">
        <property type="entry name" value="Znf-C2H2_ZFAND2A/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000058">
        <property type="entry name" value="Znf_AN1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14677">
        <property type="entry name" value="ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14677:SF27">
        <property type="entry name" value="ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01428">
        <property type="entry name" value="zf-AN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16622">
        <property type="entry name" value="zf-C2H2_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25403">
        <property type="entry name" value="zf-C2H2_ZFAND2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00154">
        <property type="entry name" value="ZnF_AN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118310">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51039">
        <property type="entry name" value="ZF_AN1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 11" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="AN1-type" evidence="13">
        <location>
            <begin position="7"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="AN1-type" evidence="13">
        <location>
            <begin position="95"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="12">
        <location>
            <begin position="221"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW34224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="286" mass="31722" checksum="01B54475DC98FD19" modified="2014-02-19" version="1">MGTPEFPNLGKHCSVSDCRQLDFLPFTCDRCNQIYCLEHRGYIEHKCTKPNKEDVTVVICPLCAKGVRLIPDQDPNITWDHHVNIDCDPSNYEKVTKKRKCPAPGCREVLVFSNTIKCRDCLEDHCLKHRFGSDHKCSGPKKLETSFSFMGFFNTTKQEETKPNLTSTASSNWTSSFLHVASNIRASAEASMSKFNQVWLSARDGVGQSNGSGNRNDDQGEHCPQCGVKFSSKTSLVDHVQKVHESNGKQLGVKKIDACPKCSRGFVDPVSLAEHVERDHGGGCGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW40</accession>
    <name>V7CW40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">chalcone synthase</fullName>
            <ecNumber evidence="4">2.3.1.74</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_001G083000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Secondary metabolite biosynthesis; flavonoid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.74" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW40"/>
    <dbReference type="SMR" id="V7CW40"/>
    <dbReference type="STRING" id="3885.V7CW40"/>
    <dbReference type="Gramene" id="ESW33593">
        <property type="protein sequence ID" value="ESW33593"/>
        <property type="gene ID" value="PHAVU_001G083000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRSY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGWQDRM"/>
    <dbReference type="OrthoDB" id="1500228at2759"/>
    <dbReference type="UniPathway" id="UPA00154"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016210">
        <property type="term" value="F:naringenin-chalcone synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009813">
        <property type="term" value="P:flavonoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030639">
        <property type="term" value="P:polyketide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000014">
        <property type="entry name" value="Chalcone synthase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000025">
        <property type="entry name" value="Chalcone synthase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012328">
        <property type="entry name" value="Chalcone/stilbene_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001099">
        <property type="entry name" value="Chalcone/stilbene_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018088">
        <property type="entry name" value="Chalcone/stilbene_synthase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011141">
        <property type="entry name" value="Polyketide_synthase_type-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11877:SF80">
        <property type="entry name" value="CHALCONE SYNTHASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11877">
        <property type="entry name" value="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02797">
        <property type="entry name" value="Chal_sti_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00195">
        <property type="entry name" value="Chal_sti_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000451">
        <property type="entry name" value="PKS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00441">
        <property type="entry name" value="CHALCONE_SYNTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0284">Flavonoid biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Chalcone/stilbene synthase N-terminal" evidence="10">
        <location>
            <begin position="5"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Chalcone/stilbene synthase C-terminal" evidence="11">
        <location>
            <begin position="238"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="8">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000451-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW33593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="391" mass="43042" checksum="63DEB5433AB00AB2" modified="2014-02-19" version="1">MVTVEEIRNAQRSHGPATILAFGTATPSNCISQADYPDYYFRITNSEHMTDLKEKFKRMCEKSMIKKRYMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAARKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAAMIIGADPDRSVERPIFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLTEAFAPIGINDWNSIFWVAHPGGPAILDQVEEKLRLKPEKLRSTRHVLSEYGNMSSACVLFILDEMRKKSKEEEKGSTGEGLEWGVLFGFGPGLTVETVVLHSVPLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW61</accession>
    <name>V7CW61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GH18 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G046400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 18 family. Chitinase class V subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW61"/>
    <dbReference type="SMR" id="V7CW61"/>
    <dbReference type="STRING" id="3885.V7CW61"/>
    <dbReference type="Gramene" id="ESW33141">
        <property type="protein sequence ID" value="ESW33141"/>
        <property type="gene ID" value="PHAVU_001G046400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2806">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FYYCSGG"/>
    <dbReference type="OrthoDB" id="76388at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004568">
        <property type="term" value="F:chitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006032">
        <property type="term" value="P:chitin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02879">
        <property type="entry name" value="GH18_plant_chitinase_class_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.10:FF:000003">
        <property type="entry name" value="Class V chitinase CHIT5b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011583">
        <property type="entry name" value="Chitinase_II/V-like_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029070">
        <property type="entry name" value="Chitinase_insertion_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001579">
        <property type="entry name" value="Glyco_hydro_18_chit_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050314">
        <property type="entry name" value="Glycosyl_Hydrlase_18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11177">
        <property type="entry name" value="CHITINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11177:SF317">
        <property type="entry name" value="CHITINASE 12-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00636">
        <property type="entry name" value="Glyco_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54556">
        <property type="entry name" value="Chitinase insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01095">
        <property type="entry name" value="GH18_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="GH18" evidence="7">
        <location>
            <begin position="48"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="392" mass="43997" checksum="6CC08A5492B4B99B" modified="2014-02-19" version="1">MDASTTSYDKKMSLQTLIFTPLLVLFMSFHSHALVQPSNWKYAPNKGGVRAAYWPSGDDLSPSSIDTKYFTHIYYAFIQQDPQLFHLSVTEFEKKWIPQFINGLRHRYPPVKTLLSIGGGGSNSTAFSLMATTKHTRQVFINSTIHVARQYGFDGLDLDWEFPENEVDMSNLGVLFHEWRQAITLEAHSCRKPPLLLTAAVYYASTIKLIGNGPRTYPIQAIRDYLDWASPMCFDYHGAWDKFTGFNAALYDPNSNISTKYGIGSWVEAGVPTHKLVMGFPLYGRTWRLKDPNVDGVGAEAVGAATDTDGTLDYDEILVFNKENGATVVYDDVAVSFYSYAGTTWIGYDDGPSITKKVHFARASGLKGYFFWALGKDKDWTISRQASNAWGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXR4</accession>
    <name>V7CXR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Metal-nicotianamine transporter YSL6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G088900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YSL (TC 2.A.67.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXR4"/>
    <dbReference type="SMR" id="V7CXR4"/>
    <dbReference type="STRING" id="3885.V7CXR4"/>
    <dbReference type="Gramene" id="ESW33666">
        <property type="protein sequence ID" value="ESW33666"/>
        <property type="gene ID" value="PHAVU_001G088900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ2H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GIGMYLP"/>
    <dbReference type="OrthoDB" id="627262at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035673">
        <property type="term" value="F:oligopeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004813">
        <property type="entry name" value="OPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045035">
        <property type="entry name" value="YSL-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00728">
        <property type="entry name" value="OPT_sfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31645">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31645:SF0">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03169">
        <property type="entry name" value="OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="155"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="317"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="388"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="417"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="443"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="467"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="509"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="561"/>
            <end position="582"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="602"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="636"/>
            <end position="660"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="676" mass="74101" checksum="AC13DA7F5BDFB869" modified="2014-02-19" version="1">MGTETSSMDISEPLLVDPHGNAEKEEYLREEVPEWKEQITIRGLVVSAVLGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFFVRTWTGFLTKMGFFAKPFTRQENTVIQTCVVACYGLAFSGGFGSSLIAMDQRTYELIGPDYPGNRAEDVKNPALGWMMGFMFVVSFLGLFSLVPLRKVMVLDYKLTYPSGTATSMLINSFHTKTGAELAGNQVRQLGKYLSISFVWSCFKWFFSGIGDSCGFDNFPSFGLTLFRNTFYFDFSPTYVGCGLICPHLVNCSVLLGAIISWGFLWPFISEHAGDWYPADLGSNDFKGLYGYKVFISIALILGDGVYNLVKIIIITVREMWRASSKQTSLPVVTEVNDDESSEQQSEEKMRDEVFLKDRIPTWFAASGYVGLAAISIATIPMIFPPLKWYLVLCSYILAPALAFCNSYGTGLTDWSLASTYGKIGLFIIAAAVGQNGGVIAGVASCAVMMSIVATAADLMQDFKTGYLTFSSAKSMFVSQLIGTAMGCVIAPLTFWMFWTAFDIGSPDGPYKAPYAVIFREMAIIGVQGFSELPLYCLEMCGGFFAAALAINLVRDVTPKKFSQYIPIPMAMAVPFYIGAYFAVDMFVGTVILFIWEKLNRKDAEDYAGAVASGLICGDGIWTIPSAILSIMRIDPPICMYFGPSSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYY8</accession>
    <name>V7CYY8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G225300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYY8"/>
    <dbReference type="SMR" id="V7CYY8"/>
    <dbReference type="STRING" id="3885.V7CYY8"/>
    <dbReference type="Gramene" id="ESW35319">
        <property type="protein sequence ID" value="ESW35319"/>
        <property type="gene ID" value="PHAVU_001G225300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYTA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VICEMTE"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="PhylomeDB" id="V7CYY8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF125">
        <property type="entry name" value="OS05G0357525 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="9"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="172" mass="19038" checksum="13495E5AC19344A1" modified="2014-02-19" version="1">MSEESRNERRVLVAVDESDESMYALSWSLKNIIFQNSTDNLVLLYVKPHHGTYASAADRLDDPEAPVFSAEVRAAIRKYSQDVADCVIEKSKRLCKNLQNVKVETHIGSGDPREVICEMTEKLNADLLVMGSHGHGLIKSIFLGSVSNHCSQKVKCPVLIVKKPKPCAGAEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZR8</accession>
    <name>V7CZR8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G251700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZR8"/>
    <dbReference type="STRING" id="3885.V7CZR8"/>
    <dbReference type="Gramene" id="ESW35637">
        <property type="protein sequence ID" value="ESW35637"/>
        <property type="gene ID" value="PHAVU_001G251700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVCG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHELQTN"/>
    <dbReference type="OrthoDB" id="2020776at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35310">
        <property type="entry name" value="CELL WALL INTEGRITY/STRESS RESPONSE COMPONENT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35310:SF5">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756334" evidence="3">
        <location>
            <begin position="28"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="247"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="283"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="324"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="357"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="394"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="133"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="47806" checksum="76B88828C4120D91" modified="2014-02-19" version="1">MAPRLYPACRTLLLLSLLFFLFLSVSSSSTATTRRMSELDEEKDDFQQPLKNKSTKNQTPFIKSIPSSKNQTKTVKSSNLNSSKNQTKTINPNSNKNQTKLAKPKTKTKTAVITDTEVVGKKLNSTTFKSKKLNSTSTKTSSSLDLGGGGGKNKTTKAAATKDKEPTKKTESEKKSGGGKKKEQQPSWVMEDELDEDLVSEFKDLPMKFQQTLIPDLERISTTSKAYIRKANKEITKGFKPYVGNKYAPTIATLLSCAFALIPLLLASVLLNKIKAYFSLQKLLIFIQAYLAIYFFILCLSSFITGLEPLRFFYSTSRSTYLCLQVLQTLAYVLYLLLLLMYLVLVFSTGSGLATKFMGLAQTLVGFSVGLHYYMTVFHRVVLKQPPKTNWKIHAIYAACFFLISLIAGADRRKKTYLEEGGEEGKKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7D027</accession>
    <name>V7D027_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Alpha/beta hydrolase fold-3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G198900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDXG' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D027"/>
    <dbReference type="SMR" id="V7D027"/>
    <dbReference type="Gramene" id="ESW35008">
        <property type="protein sequence ID" value="ESW35008"/>
        <property type="gene ID" value="PHAVU_001G198900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1515">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNSIPPE"/>
    <dbReference type="OrthoDB" id="408631at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050466">
        <property type="entry name" value="Carboxylest/Gibb_receptor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024">
        <property type="entry name" value="ARYLACETAMIDE DEACETYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23024:SF406">
        <property type="entry name" value="CARBOXYLESTERASE 15-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha/beta hydrolase fold-3" evidence="3">
        <location>
            <begin position="74"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="268"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="340" mass="38349" checksum="FDB816D7423A5192" modified="2014-02-19" version="1">MGSLPHVVEDCLGFLQLFSDGSVFRSNDIDFKISAVQDHSVTFKDYLFNKRFNLSLRFYKPKHVTLNTKNIPIVIFLHGGGFCFGSRTWPHIHNCCTRLASGLQAAVLSPDYRLAPEHRLPSAVEDAVEAVRWLQRQGLRQKEDENGGDEWLSGDVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPAEHMLNLELLDRFWRLSMPFGESRDHPLANPFGPGSPNLEEVKLDPILVIVGSNELLKDRAEEYARRLKELGKDIEYLEFEGCEHGFFTHHSYSSKLAEEVIQILKRFMLQTSTLLEPTCLKNING</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0D1</accession>
    <name>A0ACC3P0D1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967833">
        <property type="protein sequence ID" value="KAK6645755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="7117" checksum="CFEF0DA8D0BDFDDF" modified="2026-01-28" version="1">MSGCGCGSSCNCGSNCSCNKYSFDLSYAEKSESLVLGVAAAKGQFEGGEMGVGAEDGGCKCGSSCTCDPCNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2008-09-02" modified="2026-01-28" version="78" xmlns="https://uniprot.org/uniprot">
    <accession>B3KYI2</accession>
    <name>B3KYI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Asparagine synthetase [glutamine-hydrolyzing]</fullName>
            <ecNumber evidence="9">6.3.5.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">as3</name>
        <name evidence="15" type="synonym">AS3</name>
        <name evidence="16" type="ORF">PHAVU_001G252200g</name>
    </gene>
    <organism evidence="14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2009" name="Mol. Biol. Rep." volume="36" first="2249" last="2258">
            <title>PVAS3, a class-II ubiquitous asparagine synthetase from the common bean (Phaseolus vulgaris).</title>
            <authorList>
                <person name="Parra-Peralbo E."/>
                <person name="Pineda M."/>
                <person name="Aguilar M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="14">Root</tissue>
        </source>
    </reference>
    <reference evidence="16" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="17" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>L-aspartate + L-glutamine + ATP + H2O = L-asparagine + L-glutamate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12228"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58048"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-asparagine biosynthesis; L-asparagine from L-aspartate (L-Gln route): step 1/1.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.4" evidence="9"/>
    <dbReference type="EMBL" id="AM779938">
        <property type="protein sequence ID" value="CAO91866.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="AM884183">
        <property type="protein sequence ID" value="CAP04368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="B3KYI2"/>
    <dbReference type="SMR" id="B3KYI2"/>
    <dbReference type="STRING" id="3885.B3KYI2"/>
    <dbReference type="Gramene" id="ESW35642">
        <property type="protein sequence ID" value="ESW35642"/>
        <property type="gene ID" value="PHAVU_001G252200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0571">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GIVCAFD"/>
    <dbReference type="OrthoDB" id="409189at2759"/>
    <dbReference type="BRENDA" id="6.3.5.4">
        <property type="organism ID" value="4746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004066">
        <property type="term" value="F:asparagine synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006529">
        <property type="term" value="P:asparagine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00712">
        <property type="entry name" value="AsnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000055">
        <property type="entry name" value="Asparagine synthetase [glutamine-hydrolyzing]"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.10:FF:000024">
        <property type="entry name" value="Asparagine synthetase [glutamine-hydrolyzing]"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006426">
        <property type="entry name" value="Asn_synth_AEB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050795">
        <property type="entry name" value="Asn_Synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033738">
        <property type="entry name" value="AsnB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01536">
        <property type="entry name" value="asn_synth_AEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006949">
        <property type="entry name" value="PRK09431.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11772">
        <property type="entry name" value="ASPARAGINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11772:SF2">
        <property type="entry name" value="ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING]"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001589">
        <property type="entry name" value="Asn_synthetase_glu-h"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="3 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="5 9 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 10" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="2 14" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="13">
        <location>
            <begin position="2"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="active site" description="For GATase activity" evidence="10">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="267"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="341"/>
            <end position="342"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for beta-aspartyl-AMP intermediate formation" evidence="12">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR001589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CAO91866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CAP04368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW35642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="570" mass="64680" checksum="B68C50F536D3C4BC" modified="2008-09-02" version="1">MCGILAVFGCVDHSQAKRARIIELSRRLRHRGPDWSGLHCHDDCFLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKQLRQKLSSHKFRTGSDCEVIAHLYEEYGEEFVNMLDGMFAFVLLDTRDKSFIAARDAIGITPLYLGWGHDGSTWFASEMKALSDDCERFMSFPPGHIYSSKQGGLRRWYNPHWFSEDIPSTPYDPILLRETFERAVVKRMMTDVPFGVLLSGGLDSSLVASVVNRYLKESEAARQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFIDVAMSIDPEWKMIRRDLGRIEKWVLRNAFDDEKNPYLPKHILYRQKEQFSDGVGYSWIDALKDHADKQVPDATMLAANFIYPENTPTTKEGYLYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDASWSKNLDPSGRAALGVHEASYEDVVDTKIDQPKNGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-01-22" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>U5TZK0</accession>
    <name>U5TZK0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ADP-ribosylation factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_004G011900g</name>
    </gene>
    <organism evidence="15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="submission" date="2013-07" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="15">Pod</tissue>
        </source>
    </reference>
    <reference evidence="17" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 14">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <dbReference type="EMBL" id="KF378833">
        <property type="protein sequence ID" value="AGZ15424.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="U5TZK0"/>
    <dbReference type="SMR" id="U5TZK0"/>
    <dbReference type="STRING" id="3885.U5TZK0"/>
    <dbReference type="Gramene" id="ESW23012">
        <property type="protein sequence ID" value="ESW23012"/>
        <property type="gene ID" value="PHAVU_004G011900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0070">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYYANTN"/>
    <dbReference type="OrthoDB" id="1841414at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016004">
        <property type="term" value="F:phospholipase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04150">
        <property type="entry name" value="Arf1_5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:003500">
        <property type="entry name" value="ADP-ribosylation factor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045872">
        <property type="entry name" value="Arf1-5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="6 14" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8 14" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 11 13" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10 14" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 14" id="KW-0519">Myristate</keyword>
    <keyword evidence="5 11 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 14" id="KW-0653">Protein transport</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="24"/>
            <end position="31"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU369003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="AGZ15424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW23012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="181" mass="20681" checksum="89BBAA2B743CB340" modified="2014-01-22" version="1">MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELREAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADN5</accession>
    <name>V7ADN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">WD repeat-containing protein 55</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G028400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the WD repeat WDR55 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADN5"/>
    <dbReference type="SMR" id="V7ADN5"/>
    <dbReference type="STRING" id="3885.V7ADN5"/>
    <dbReference type="Gramene" id="ESW03614">
        <property type="protein sequence ID" value="ESW03614"/>
        <property type="gene ID" value="PHAVU_011G028400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2444">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2288928at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000516">
        <property type="entry name" value="WD repeat-containing protein 55-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017422">
        <property type="entry name" value="WDR55"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050505">
        <property type="entry name" value="WDR55/POC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44019">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44019:SF20">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24796">
        <property type="entry name" value="WDR55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038169">
        <property type="entry name" value="WD_repeat_p55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="131"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="266"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="306"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="312"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="343"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR038169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39170" checksum="9D9D3D90CA210B85" modified="2014-02-19" version="1">MEINLGKLAFDIDFHPSDNLVATGLIDGDVHLYRYSPDSVPVRQLEVHAHTESCRAVRFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAVNRLINLTESTVASGDDEGCIKVWDTRERSCCNSFNAHEDYISDMTFASDARKLLTTSGDGTLSVCNLRRNTVQTRSEFSEDELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFIDLSSNSIDAMLKVDEDRIITGSENGMINLVGILPNRVIQPIAEHSDCPIECLAFSHDRKFLGSIAHDQMLKLWDLDSILQDTVNTQTNETGVVDSDSDGDEMELDKDSSKLSKGNFVTGNKRKNANNEQAGSNNFFADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGA8</accession>
    <name>V7AGA8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="6 7">6.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G049400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:15421"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57560"/>
            <dbReference type="ChEBI" id="CHEBI:83139"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.2.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Lipid metabolism; fatty acid metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.3" evidence="6 7"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGA8"/>
    <dbReference type="SMR" id="V7AGA8"/>
    <dbReference type="STRING" id="3885.V7AGA8"/>
    <dbReference type="Gramene" id="ESW03878">
        <property type="protein sequence ID" value="ESW03878"/>
        <property type="gene ID" value="PHAVU_011G049400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1256">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDHNDVY"/>
    <dbReference type="OrthoDB" id="1700726at2759"/>
    <dbReference type="UniPathway" id="UPA00199"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010143">
        <property type="term" value="P:cutin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010025">
        <property type="term" value="P:wax biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05927">
        <property type="entry name" value="LC-FACS_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045311">
        <property type="entry name" value="LC-FACS_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272:SF94">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="8">
        <location>
            <begin position="67"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00026121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU369030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="656" mass="74140" checksum="24EBC056DC1E63AC" modified="2014-02-19" version="1">MAEVYTVKVEEARLETDEKPSAGPVYRCIYARDGLMELPSHFESPWDFFRDTTKRCPSNPMLGRRQKTDLKAGPYEWMTYQEAYDAAIRMGSAMRSRGVNPGDRCGIYGSNCSEWILAMEACNSYAVTYVPLYDTLGANAVEFIINHAEVSIAFVQDSKIPSVLSCLGRCSNLKTIVSFGNVLTAQKKEAEEFGASCFSWEEFLQLGDLDLDMPLKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAQVLSIDQMLKLTDKVGTEEDVYFSFLPLAHVYDQIMETYWVYKGSSIGFWQGDVRFLMEDIQVLKPTVFCGVPRIYDRVYASISSKISSAGTLRNTLFQYAYNYKLGYMEKGLPQDIAAPLFDKFVFDKIKLALGGRVRLLLSGAAPLARHVEEFLRVTFGATMLQGYGLTESCGGCFTAISNVFSMMGTIGVPTTTIEARLESVPEMGYDALSTEARGEICLRGNTLFSGYHKRQDLTEQVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAVVVPERKALEDWAVKHNSTDDFKSLFENPKTRKYILDELNSTGRKHQLRGFEMLKAVHLEPNPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKEAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AID0</accession>
    <name>V7AID0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit</fullName>
            <shortName evidence="8">Oligosaccharyl transferase 48 kDa subunit</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G047300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Component of the oligosaccharyltransferase (OST) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Endoplasmic reticulum membrane</location>
            <topology evidence="8">Single-pass type I membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the DDOST 48 kDa subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AID0"/>
    <dbReference type="SMR" id="V7AID0"/>
    <dbReference type="STRING" id="3885.V7AID0"/>
    <dbReference type="Gramene" id="ESW03851">
        <property type="protein sequence ID" value="ESW03851"/>
        <property type="gene ID" value="PHAVU_011G047300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2754">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AHDEYPR"/>
    <dbReference type="OrthoDB" id="29105at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008250">
        <property type="term" value="C:oligosaccharyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018279">
        <property type="term" value="P:protein N-linked glycosylation via asparagine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005013">
        <property type="entry name" value="DDOST_48_kDa_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055459">
        <property type="entry name" value="OST48_MD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055457">
        <property type="entry name" value="OST48_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10830">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10830:SF0">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23358">
        <property type="entry name" value="OST48_MD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03345">
        <property type="entry name" value="OST48_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148917" description="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" evidence="8">
        <location>
            <begin position="19"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="409"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="domain" description="OST48 N-terminal" evidence="9">
        <location>
            <begin position="28"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="OST48 middle" evidence="10">
        <location>
            <begin position="295"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF23358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW03851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="433" mass="48224" checksum="02BFDB693BBC80C8" modified="2014-02-19" version="1">MSKLIFVFLAFIPLLCTSFSPERPSDRRVLVLLDDFAVKSSHSLFFNSLKSRGFDLHFHLADDPKIALQRYGQYLYDALILFSPTIERFGGSVDAAAILDFVDSGHDLIVAADSNASDLIREIAVECGVDFDEDPASMVVDHSGYAVSATEGDHTLIASDDFIKSDVILGSKKIEAPVLFQGIGHSLNPTNSLVLKALSASPSAFSANPKSKLTSPPSLTGSSISLVSVIQARNNARILISGSLSMFSNRFFRSGVQKAGSPTKHEKSGNEQFFTELSKWVFHERGHLKAVHMQHHKVGEANEPAIYRINDDLEFSVEIFEWSGTSWEPYVADDVQVQFYMMSPYVLKTLSTNGKGHYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFIFTAVHLYSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIG2</accession>
    <name>V7AIG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G171500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIG2"/>
    <dbReference type="SMR" id="V7AIG2"/>
    <dbReference type="Gramene" id="ESW05334">
        <property type="protein sequence ID" value="ESW05334"/>
        <property type="gene ID" value="PHAVU_011G171500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7CQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TFNCKSK"/>
    <dbReference type="OrthoDB" id="1430548at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025080245" description="S-protein homolog" evidence="6">
        <location>
            <begin position="23"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="134" mass="15733" checksum="BE49B4459BDC7E28" modified="2014-02-19" version="1">MSVTVKSFFLLWLLVQPSTNHAFSAPKPQPAVIIRNELQGGRDLFLHCKSADEDLGVQHLHPLGTFSWSFDINFFRTTLFHCSFQWESVLHRFDIYKARRDSYRCFVCTWVVREDGPCLVLDKEECYGWKTLEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJN4</accession>
    <name>V7AJN4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G210800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJN4"/>
    <dbReference type="SMR" id="V7AJN4"/>
    <dbReference type="STRING" id="3885.V7AJN4"/>
    <dbReference type="Gramene" id="ESW05802">
        <property type="protein sequence ID" value="ESW05802"/>
        <property type="gene ID" value="PHAVU_011G210800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0390">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQVHIDD"/>
    <dbReference type="OrthoDB" id="9900844at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080188">
        <property type="term" value="P:gene silencing by siRNA-directed DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044567">
        <property type="entry name" value="CLSY/DRD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45821:SF1">
        <property type="entry name" value="ATP-DEPENDENT HELICASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45821">
        <property type="entry name" value="SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="355"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="9">
        <location>
            <begin position="680"/>
            <end position="847"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="115"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="115"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="871" mass="99168" checksum="6CDCC80FF296582E" modified="2014-02-19" version="1">MQILGPYFAKYPGLVDQLINVVTDHDEDTAMFEDQLDNGLTYHNVIDSEGKDVSAAPIPVIHIDSDVEDDGDERSIVPFPEASEEEDDRHNKSIVPFHEASKEEDDRHNISIVRFHEASKEEDDRQKKSVVPFHEASEEEDDRQKKSVASFYEIVLPREVVPSPVVMKTTRPRTPMRNHGKSKDLKIETSMADKGTTRDKGVYIGVEEQEDLQVDTADNEGLEDIWKEMSMAMECSKVVSANPLLDEEVGRDHEEEERDEDCDHSLILKDDIGYVCRVCGIIDRRIETIFEFQYKVKRSTRTYASDSCKTKAKADVFGINVVGDDLMVTEIPAHPRHMKQMKPHQVEGFNFLGRNLAGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQIWQVEDIPLYDFYTVKADSRSQQLEVLKQWMEKKSVLFLGYKQFSSIVCDNGTNSTSLSCQDILLKVPSILILDEGHNPRNENTDMVQSLAKVQTPRKVVLSGTLYQNHVREVFNILNLVRPKFLKMETSKPIVRRIESRVHIPGMRTFYDLVENTLKGTDFKGKVAVIRDLREMTSNVLHYYKGDFLEELPGLVDFTVVLNLSPKQKLDLERLKKSSGKFKISSVGSALYLHPKLKSLAEKCGENNISDDILDALIEKSDPRDGVKSKFFWNMLNLCESAGEKLLVFSQYLLPLKYLERLTVQTKGWSLGREIFVISGESSYEQREWSMEKFNNSPNAKVFFGSIKACGEGISLVGASRIVILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVSADSPEEEDNNTCLKKELISKMWFEWNEYCGDRAFEVEQVLLKDCNDLFLESPLLGEDVKALYKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJP2</accession>
    <name>V7AJP2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G207400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJP2"/>
    <dbReference type="STRING" id="3885.V7AJP2"/>
    <dbReference type="Gramene" id="ESW05764">
        <property type="protein sequence ID" value="ESW05764"/>
        <property type="gene ID" value="PHAVU_011G207400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0284">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGSSMVQ"/>
    <dbReference type="OrthoDB" id="16717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005847">
        <property type="term" value="C:mRNA cleavage and polyadenylation specificity factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031124">
        <property type="term" value="P:mRNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000237">
        <property type="entry name" value="Flowering time control protein FY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000409">
        <property type="entry name" value="Flowering time control protein FY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045245">
        <property type="entry name" value="Pfs2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22836:SF0">
        <property type="entry name" value="PRE-MRNA 3' END PROCESSING PROTEIN WDR33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22836">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="155"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="197"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="239"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="281"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="323"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="365"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="409"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="494"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="642"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="38"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="537"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="667"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="694"/>
            <end position="710"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="710" mass="78655" checksum="6029C9B538182A1B" modified="2014-02-19" version="1">MMYNDPQHQQHQQHQQHPYQQQPPHFHHQPPGQEFHRGPPPSSQPPPVMRQGSASSTNIAPEFHHPGPGGPPPPHYDVHGDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHDTPQIEIANAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTLRDRFNPGMQGYADPNPVAGRVGGNFPMAEGPTTPGPFAPGLTRNDGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLGPNQQQPYQQNPQQMPPQHQHQGLPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPIGMPGSIPGISSVPTSHPMPMPGPMGMQMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNMPNIPGPSNANYSQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNVQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJS8</accession>
    <name>V7AJS8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G186600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Secreted</location>
            <location evidence="1 13">Extracellular space</location>
            <location evidence="1 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJS8"/>
    <dbReference type="SMR" id="V7AJS8"/>
    <dbReference type="Gramene" id="ESW05520">
        <property type="protein sequence ID" value="ESW05520"/>
        <property type="gene ID" value="PHAVU_011G186600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXK8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLHYCLN"/>
    <dbReference type="OrthoDB" id="1921208at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010497">
        <property type="term" value="P:plasmodesmata-mediated intercellular transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000280">
        <property type="term" value="P:regulation of root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02241">
        <property type="entry name" value="cupin_OxOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000025">
        <property type="entry name" value="germin-like protein subfamily 2 member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019780">
        <property type="entry name" value="Germin_Mn-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00725">
        <property type="entry name" value="GERMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="7 12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 10 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019611716" description="Germin-like protein" evidence="13">
        <location>
            <begin position="27"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="14">
        <location>
            <begin position="66"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="12">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR601929-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW05520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="25082" checksum="833847492DF15859" modified="2014-02-19" version="1">MTLKSFAHLLFMLFFVAFSNIQICLGDCENLQDTCPAVPPNQQTIFINGLQCKNPVNVTAQDFRTTKLSNAGSTDIFGASMKIVSAAEFGGLNTLGLSIGRTDLDGNGLVNFHYHPRATEMIFVTKGVLLAGFVDTNNQYFQKLIKVGDVFVFPKALFHFYLNTGFEEATIFSVYNSQNPGFVSLSPTTLDTTLESLDKIKRKLISLSASEAQDVNSFISPEMESIFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKT6</accession>
    <name>V7AKT6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G0001001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW05875"/>
        <property type="gene ID" value="PHAVU_010G0001001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="28" mass="3299" checksum="ECD5B50FB50D452F" modified="2014-02-19" version="1" fragment="single">QTDEYSPTKKIKQFHTQTNIPFCPDSDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMM1</accession>
    <name>V7AMM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G054400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMM1"/>
    <dbReference type="SMR" id="V7AMM1"/>
    <dbReference type="STRING" id="3885.V7AMM1"/>
    <dbReference type="Gramene" id="ESW06515">
        <property type="protein sequence ID" value="ESW06515"/>
        <property type="gene ID" value="PHAVU_010G054400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R41B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRNCDER"/>
    <dbReference type="OrthoDB" id="6160824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF259">
        <property type="entry name" value="ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TIR" evidence="2">
        <location>
            <begin position="15"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="37210" checksum="2BE6D86353BAA0E9" modified="2014-02-19" version="1">MTSSSSSSSSSLATDTYDVFVSFRGEDTRNSFIGFLFQALGTKGINVFKDVEDLKKGESIAPELLQAIQASQVFIIVFSENYASSTWCLRELAEIRNCDERRVIIPIFYDVDPSVVRKQSGSYEKAFAEYEKRFREDEVKMEEVQRWRQALTQVANLSGWDIRNKLHCEQIEEIVERIIKILGPKLSRLPKDELVGIEFRVKELTNLLHLESVNDVRVIGISGRDGIGKTTLARALYERISHQYDFRCFIDDMSNIYGDTGSLGVQKQLISQFLNEKNLKIFNAIDGAYWVWNRLHKARALIVLDNVDKGEQLKLFTGTEIYVHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMY8</accession>
    <name>V7AMY8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="7">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_010G094600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="7">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DEAD box helicase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="7"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMY8"/>
    <dbReference type="SMR" id="V7AMY8"/>
    <dbReference type="STRING" id="3885.V7AMY8"/>
    <dbReference type="Gramene" id="ESW07007">
        <property type="protein sequence ID" value="ESW07007"/>
        <property type="gene ID" value="PHAVU_010G094600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMIQKAR"/>
    <dbReference type="OrthoDB" id="4310724at2759"/>
    <dbReference type="PhylomeDB" id="V7AMY8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17946">
        <property type="entry name" value="DEADc_DDX24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="12">
        <location>
            <begin position="172"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="204"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="11">
        <location>
            <begin position="455"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="72"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="771"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="652"/>
            <end position="692"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="6">
        <location>
            <begin position="172"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="90"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="123"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="138"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="778"/>
            <end position="804"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW07007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="804" mass="90337" checksum="DE532CFF52126309" modified="2014-02-19" version="1">MEAATVATSSQRKLKRKRTLAKSDPEFDRLNSLPWNSSLPQNDDDGAFSIFIGSNELEGGFLSLEEIDEAEYGLNIPEPEYGKRKTKKKSVQDEDVKKQQQDGVGGASSDEVEAELDESVKAKEKKKKKKKKKKTKKKDATEDQKVEQPDAGLDANVKDGNGEEDNDETEYYAWNELRLHPLLMKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEERDKDANVVEEPEKYSSKGVLRALIIAPTRELALQVTDHLKAVAKYINVRVTPIVGGILAEKQERLLKAKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISTEDNSQNVQKSCVTVSSYQRKKRQTLVFSATIALSSDFRKKLKHGSIQKKQSSTEGLNSIETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSILRILGINVWTLHAQMQQRARLKAFDRFRGNENGILVATDVAARGLDIPDVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISTRDTSKFASLCKSFSKDNFQRFPLENSFMPEVLKRLSLARQIDKITRKDSQVKAEKSWFDRNASSVELVTENYDSEEEQVNKQKQMKVSSRQLKKLQEELNMLISRPLESKSFSHRYLAGAGVTPLMQEQLQQLARQKLSDHQGSSLGKKGKLVVIGQDCMDALQALRSAGEEVRMNIKDLAGKQRNVETLKRKRKEEKKRSRDQRRKQKKKLKYGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN08</accession>
    <name>V7AN08_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_010G086600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN08"/>
    <dbReference type="Gramene" id="ESW06909">
        <property type="protein sequence ID" value="ESW06909"/>
        <property type="gene ID" value="PHAVU_010G086600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGLWCDV"/>
    <dbReference type="OrthoDB" id="626167at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001023">
        <property type="entry name" value="Os07g0541700 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044576">
        <property type="entry name" value="At4g25390-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46821:SF2">
        <property type="entry name" value="OS03G0251700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46821">
        <property type="entry name" value="OS07G0586332 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="24"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="78"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="357"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="474"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="620"/>
            <end position="642"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="364"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="622"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW06909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="642" mass="71337" checksum="B430E7F671E94A8C" modified="2014-02-19" version="1">MPSRPPPPSPHAALSAVVSHRREMILCGAIGGALFLTALIVSVTVFLYRKLSYNRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKAALPSGQTVALKVMDSPGSIQGEREFHNELTLCSNLKSPFVISLLGFSSDRRGRKLVLVYELMANRSLQDALLDRRCPELMCWAKRFDVAVSVAMGLEYLHHVCEPPVIHGDIKPSNVLLDEDFGAKIGDFGLARVKAVEDLGMVEEKKEGVAEIGVDEFGVMEEGESVSVVDVDRSPESCPVRVVEYSDASPVGGDKLSVVSDGCFESVDSENVNLNKKKGGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIKKERPKSEWVDSCSSSSPKVENENVNVNGSEKSKKKERKRLDWWASLDEEKVKSKVKKNRKPREWWKEEFCEELSKKNRKKKRGLEWWQREEEGVEQKKKRKSKGSRGSIDWWLDGLSGEIRNNGRRNSQDWGVSGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHSGRLLDLVDTSIHSLDKEQALLCITIALLCLQRCPGKRPSMKEVVGMLNGEADPPHLPFEFSPSPPSNFLFKGRKKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANA9</accession>
    <name>V7ANA9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GRIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G105500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANA9"/>
    <dbReference type="SMR" id="V7ANA9"/>
    <dbReference type="STRING" id="3885.V7ANA9"/>
    <dbReference type="Gramene" id="ESW07147">
        <property type="protein sequence ID" value="ESW07147"/>
        <property type="gene ID" value="PHAVU_010G105500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSWR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWKDESS"/>
    <dbReference type="OrthoDB" id="71227at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007030">
        <property type="term" value="P:Golgi organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18921">
        <property type="entry name" value="MYOSIN HEAVY CHAIN - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18921:SF2">
        <property type="entry name" value="THYROID RECEPTOR-INTERACTING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="32"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="143"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="334"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="690"/>
            <end position="811"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="76"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="221"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="710"/>
            <end position="750"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="789"/>
            <end position="811"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="811" mass="90828" checksum="4A6E0D13DD0BFD7A" modified="2014-02-19" version="1">MWGTIANFKENLNKIALDVHDDDDDEILREYGTGIPANGENSAVSGRRSSLGSASSKSGTRSPLANGIDLASLSEIEQYKAEIKKLQASEAEIKALSVNYAALLKEKEDHIVKLNKDNGSLKQNLEATKAALRVSRIEGSGVSTNGTYTVKGSSDQSPNRQNKFNVQRKSRNAISNGTVSTLKSDAIQSEMDFEHSNLQGNSKEFAVDGNTTVAVQHSPDIQRLKLQLEQERDQLAKIQLKFQEEQRLSQSFEEELKMLKLERDKKSMELNKIHNELNEKVSEIKDLQFEFTKRENGAGEAVDSLKILIKTLEQENTTLKMEKSEIEAALENSRKSFTDKMMRDASHTQEKDSSSVSDMPDHSKSFPEKEEMERSLHKLSKDLNEAQRDRDRAVQELNRLKQHLLEKASEESDKMDEDSKIIEELRDSNTYLRAQVSHLERTLKQALASQEELKMANNSEILKSREAINDLNKKLTNCMSTIDAKNIELLNLQTALGQYYAEIEAKEHLERELAHAREETAKLSQLLKEADHGAEVSRNEREEILAKLSQSEKVQTEWRSRVSKLEDDNAKLRKVLEQSLTQLNRMSVDSDYLVDRRIVIKLLVTYFQRNHSREVLDLMVRMLGFSDEDKQRIGGAQQGAGKGVVRGVLGLPGRLVGGILGNSTESAANAGSDSQSFADLWVDFLLKETEEREKRESSGNPGKATEDSSNKSPNTMSATPPFSNKSPNTMSATPPFSNKSPNTISATPPFSNLKFDAGRTSAFPISPNNQNVSPPPRVYFQRSEHFDSEFSTVPLTSSDAKTTSSNPLPRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7APA1</accession>
    <name>V7APA1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PNPLA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G0470001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APA1"/>
    <dbReference type="Gramene" id="ESW06428">
        <property type="protein sequence ID" value="ESW06428"/>
        <property type="gene ID" value="PHAVU_010G0470001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1658288at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755814" description="PNPLA domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="59" mass="6256" checksum="C83D52F964F79528" modified="2014-02-19" version="1" fragment="single">MAAFLLLFLVFSSQLIGGMNAQLPSSAYENIITILSIDGGGIRGLVPAVVLQHLEKSLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7APH9</accession>
    <name>V7APH9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cytochrome b561 and DOMON domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G110400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APH9"/>
    <dbReference type="STRING" id="3885.V7APH9"/>
    <dbReference type="Gramene" id="ESW07205">
        <property type="protein sequence ID" value="ESW07205"/>
        <property type="gene ID" value="PHAVU_010G110400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4293">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNWYHYS"/>
    <dbReference type="OrthoDB" id="19261at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd08760">
        <property type="entry name" value="Cyt_b561_FRRS1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09631">
        <property type="entry name" value="DOMON_DOH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006593">
        <property type="entry name" value="Cyt_b561/ferric_Rdtase_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045266">
        <property type="entry name" value="DOH_DOMON"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005018">
        <property type="entry name" value="DOMON_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23130">
        <property type="entry name" value="CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23130:SF171">
        <property type="entry name" value="OS01G0895300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03351">
        <property type="entry name" value="DOMON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00665">
        <property type="entry name" value="B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00664">
        <property type="entry name" value="DoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50939">
        <property type="entry name" value="CYTOCHROME_B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50836">
        <property type="entry name" value="DOMON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753946" description="Cytochrome b561 and DOMON domain-containing protein" evidence="9">
        <location>
            <begin position="25"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="210"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="243"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="311"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="335"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="DOMON" evidence="10">
        <location>
            <begin position="55"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome b561" evidence="11">
        <location>
            <begin position="173"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="375" mass="42207" checksum="CCF81E46030219A0" modified="2014-02-19" version="1">MKLTSLCQIVLFIMLYNSSTFVTSQDSCSSKLMQLQLPIPFETSSLLCSSVWPTHNFILRYAKASSDVWSFIFSFPLDTKAYAAIGFSKDGNMVGSSAIVGWMPSPGAGGMKLYYLGGKSQDEVIRDRSDLYVMNASFVPPTDSLGYLIFQLKTTQPSTNLIFAIGPNGQFPDYPQYNLPKHIDQTSVTIDYSKGSTGENSNLKLRRSHGVLNIMGWSIVMIIGSIIGRYLKEWFYLHASIQAFGFLTGLFGILCGLLLSNKLNSKVTHHKNIAILIILLAFLQVLAIILRPGRESKIRKYWNWYHHNVGRILIIFAILNTFYGLHLGGEGSKWFLAYGLIIAVLLIVFVCLEIRMRMIARREIRSFSKSVEMPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQD1</accession>
    <name>V7AQD1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein bL34m</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G137600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bL34 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQD1"/>
    <dbReference type="SMR" id="V7AQD1"/>
    <dbReference type="STRING" id="3885.V7AQD1"/>
    <dbReference type="Gramene" id="ESW07530">
        <property type="protein sequence ID" value="ESW07530"/>
        <property type="gene ID" value="PHAVU_010G137600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S28R">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPQNDVE"/>
    <dbReference type="OrthoDB" id="431691at2759"/>
    <dbReference type="PhylomeDB" id="V7AQD1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005762">
        <property type="term" value="C:mitochondrial large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.3980:FF:000001">
        <property type="entry name" value="Mitochondrial ribosomal protein L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.3980">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00391">
        <property type="entry name" value="Ribosomal_bL34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000271">
        <property type="entry name" value="Ribosomal_bL34"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020939">
        <property type="entry name" value="Ribosomal_bL34_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01030">
        <property type="entry name" value="rpmH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14503">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14503:SF12">
        <property type="entry name" value="RIBOSOMAL PROTEIN L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00468">
        <property type="entry name" value="Ribosomal_L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00784">
        <property type="entry name" value="RIBOSOMAL_L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="133" mass="14950" checksum="53FA4AD44E6FE42D" modified="2014-02-19" version="1">MASNSFLRSGASLFNRLSKSLLPLHSNNPQLQSHLFLPSLSKLPAPISPQNDVEFPHNQGFLYPCGLPSLDFFLPHGDPPSSDDPMLLFPKRTFQPSLIKRKRNHGFFARKATKGGRRVIARRIAKGRYRITA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQY5</accession>
    <name>V7AQY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycosyl transferase CAP10 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G096100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQY5"/>
    <dbReference type="SMR" id="V7AQY5"/>
    <dbReference type="Gramene" id="ESW07028">
        <property type="protein sequence ID" value="ESW07028"/>
        <property type="gene ID" value="PHAVU_010G096100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2458">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFMDATL"/>
    <dbReference type="OrthoDB" id="202415at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006598">
        <property type="entry name" value="CAP10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051091">
        <property type="entry name" value="O-Glucosyltr/Glycosyltrsf_90"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12203:SF74">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12203">
        <property type="entry name" value="KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05686">
        <property type="entry name" value="Glyco_transf_90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00672">
        <property type="entry name" value="CAP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl transferase CAP10" evidence="2">
        <location>
            <begin position="180"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="509" mass="59540" checksum="8152239387BEF423" modified="2014-02-19" version="1">MEKDNEAYLKLFWGRSNHHKLGLLSKKGKSRTMVIVMVCFAATFLVFTVCNITSTFSPGIGISILTKKKLPPMAKQEFPLRCTLPHVPQSCPRDYPTSQKPTGPARTCPSYFQWIHEDLKAWRGKGITREMVEGARRTAHFRVVIVDGKMYVENYKKSIQTRDAFTLWGLMQLLRVYPGKVPDLELLFDCDDRPVIPKGRFEGPDAATPPLFRYCSDQWSYDIVFPDWSFWGWAEINIKPWKYVLEDIKNGNQKTKWEDRVPYAYWKGNPLVTPTRKDLMRCNVTEKDDWNTHLYIQDWKQESHEGFKKSNLGDQCTHRYKIYVEGWAWSVSEKYILACDSTNLYVRSRFHDFFIRGMVPLEHYWPIRDNSKCTSLKFAVEWGNNHTDKAKAIGEAARKFIHEGMDMDYVYDYMFHLLNEYAKLLRFKPVIPPKAVEYCPETMACALSGTERRFMEDSMVKVPSDSNPCTIPPPYDATSLQQFLDKKANSTRQVEIWEDEYWESKKKAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARX7</accession>
    <name>V7ARX7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G0914001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="10" mass="1192" checksum="9968D77059D40735" modified="2014-02-19" version="1" fragment="single">SRSLRFIGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASG0</accession>
    <name>V7ASG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G104100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASG0"/>
    <dbReference type="SMR" id="V7ASG0"/>
    <dbReference type="STRING" id="3885.V7ASG0"/>
    <dbReference type="Gramene" id="ESW07131">
        <property type="protein sequence ID" value="ESW07131"/>
        <property type="gene ID" value="PHAVU_010G104100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07132">
        <property type="protein sequence ID" value="ESW07132"/>
        <property type="gene ID" value="PHAVU_010G104100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0827">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHFFGKA"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47344">
        <property type="entry name" value="RING ZINC FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47344:SF1">
        <property type="entry name" value="RING ZINC FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="12"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="500"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="535"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="102"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="246"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="504"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="535"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="579" mass="64075" checksum="25E46A454797B83D" modified="2014-02-19" version="1">MVDGGEFAGTICSICYEPLDPITEDLQSVSICGHVFHELCLQQWFEYCSKGKKHTCPICKQSCRASDACRLYFQSVGDASDGGKLLRSFESEENVGVLRREVKRLEVKVSGLTSELERQTKELEGVKEELCICKEEAKTETALKIEALNQKTFIQFQLHKKLEELEKSTLESFRLKEKNMALAKELAALKLVSDLDIDEEEVLKLATFGNGANSKDTIDTLKRSLVMRNRSYKELMAKCNVLGRGEARYSKKLEKAKEKITKLKAKVQELETLAEAKENEYQMSLKLSKRTKSSKNFEKKYTDSDATASKFPVEKPGKQISAPKSGINLAANDNCKSFQSLKIENSNATTNKAVNISNETPDKKRDYITIDEDELEATKALQGCSKHNNKERDMNDIACSKPSLAKLETMSATKTETLLQGKCTLAESPRVDVDIDMTNNSAGPMDEDVTLQATINQPVVNIRKESPFTLSNSGPDNIWFSGGLLGPDGTHRFLGKWCKRGQNSESSSSAKRSSNGDLIAVGADGRGGRIKVLRTPTQILSGGKENSASSKRSKLGAKTSSLHSQGCLQIEHFFGRVTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATG1</accession>
    <name>V7ATG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Mitochondrial carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G080300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATG1"/>
    <dbReference type="SMR" id="V7ATG1"/>
    <dbReference type="Gramene" id="ESW08859">
        <property type="protein sequence ID" value="ESW08859"/>
        <property type="gene ID" value="PHAVU_009G080300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0765">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RLIWGGF"/>
    <dbReference type="OrthoDB" id="250329at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002067">
        <property type="entry name" value="MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46080:SF4">
        <property type="entry name" value="MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46080">
        <property type="entry name" value="MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00926">
        <property type="entry name" value="MITOCARRIER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="6">
        <location>
            <begin position="27"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="6">
        <location>
            <begin position="123"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="6">
        <location>
            <begin position="249"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="344" mass="37456" checksum="43ACD4C7DA75E129" modified="2014-02-19" version="1">MSLGTAEDDPGSEIHIPAEIDWHMLDKSKFFYLGAALFSGVSFTLYPMVVLKTRQQVSSARFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVGTAFLELGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSAGSKNILANHNYESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMSKGKTESSDNLSGFRPNSKTVVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDSEEHGRRRPLTFVQTVRNLVKEGGLPACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATW5</accession>
    <name>V7ATW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="8">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G093700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the RdRP family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="8"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATW5"/>
    <dbReference type="SMR" id="V7ATW5"/>
    <dbReference type="STRING" id="3885.V7ATW5"/>
    <dbReference type="Gramene" id="ESW09024">
        <property type="protein sequence ID" value="ESW09024"/>
        <property type="gene ID" value="PHAVU_009G093700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0988">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KGLMGQY"/>
    <dbReference type="OrthoDB" id="6513042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031380">
        <property type="term" value="C:nuclear RNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003968">
        <property type="term" value="F:RNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030422">
        <property type="term" value="P:siRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057297">
        <property type="entry name" value="RDR6-like_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057298">
        <property type="entry name" value="RDR6-like_RBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007855">
        <property type="entry name" value="RDRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058752">
        <property type="entry name" value="RDRP_C_head"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058751">
        <property type="entry name" value="RDRP_helical"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079:SF18">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24572">
        <property type="entry name" value="RBD_RDR6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24577">
        <property type="entry name" value="RDR6_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26253">
        <property type="entry name" value="RdRP_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26252">
        <property type="entry name" value="RdRP_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 8" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="6 8" id="KW-0943">RNA-mediated gene silencing</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA-dependent RNA polymerase 6-like RNA-binding" evidence="10">
        <location>
            <begin position="8"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="RNA-dependent RNA polymerase 6-like second" evidence="11">
        <location>
            <begin position="131"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP helical" evidence="12">
        <location>
            <begin position="326"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP core" evidence="9">
        <location>
            <begin position="420"/>
            <end position="999"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP C-terminal head" evidence="13">
        <location>
            <begin position="1020"/>
            <end position="1188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF24572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF24577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF26252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF26253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW09024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1204" mass="137677" checksum="FD680A68782E3F43" modified="2014-02-19" version="1">MDLEASEKDSVVTQISIGGFGSEVKASELVNYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKIKGTDDYKKVEPHAFVHFASPESVTAALNASGRCDLFLKNEPLKVSCGPENPYFLNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDIAFPFKGIEKEAVIKCDFQVGFLVRDINEIRRYNDSSYLVVLLHLASSPWVWYRTAEDDIEDLVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKGQRVQMQELPLKQTLRALNEPDFGTPMSNPFFYIDYQVGITFDIMFLVNAIVHKGIFNQHRLSDRFFELLRNQPKELNVAALKHLCSYKRPVFDATKRLKVVQEWLLRNPKLYQISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNTFSQKTKIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEKMKCDEIRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNSMLPDVERNNYVFSDGIGIITPDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSTHTILEICAWTRFQPGFLNRQIITLLSALGVPDEIFWKMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKRSWIPMEYAAQESKLQTRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRRIKDAYDEDIDAPYLNFVSGDIPYDKDLEVPGSSAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLSSDVGELSEEEKNLLYEQKASAWYQVTYHPYWVKKSLDLQDKSPESQEADCLGSTVMLSFPWIAVDYLARTKIRERHRKSGNFDSTKPVDSLAMYLSERL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUM0</accession>
    <name>V7AUM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ADF-H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G120100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the actin-binding proteins ADF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUM0"/>
    <dbReference type="SMR" id="V7AUM0"/>
    <dbReference type="STRING" id="3885.V7AUM0"/>
    <dbReference type="Gramene" id="ESW09347">
        <property type="protein sequence ID" value="ESW09347"/>
        <property type="gene ID" value="PHAVU_009G120100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1735">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEMKWKR"/>
    <dbReference type="OrthoDB" id="10249245at2759"/>
    <dbReference type="PhylomeDB" id="V7AUM0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015629">
        <property type="term" value="C:actin cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003779">
        <property type="term" value="F:actin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030042">
        <property type="term" value="P:actin filament depolymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11286">
        <property type="entry name" value="ADF_cofilin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002108">
        <property type="entry name" value="ADF-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017904">
        <property type="entry name" value="ADF/Cofilin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11913">
        <property type="entry name" value="COFILIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00241">
        <property type="entry name" value="Cofilin_ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00102">
        <property type="entry name" value="ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51263">
        <property type="entry name" value="ADF_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADF-H" evidence="3">
        <location>
            <begin position="11"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="143" mass="16345" checksum="A98B04930260971C" modified="2014-02-19" version="1">MAMAFKMATTGMWVTDECKKSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTDGYHDLTASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWA4</accession>
    <name>V7AWA4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G138100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWA4"/>
    <dbReference type="Gramene" id="ESW09570">
        <property type="protein sequence ID" value="ESW09570"/>
        <property type="gene ID" value="PHAVU_009G138100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SFNR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHNKEAH"/>
    <dbReference type="OrthoDB" id="1400009at2759"/>
    <dbReference type="PhylomeDB" id="V7AWA4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049306">
        <property type="entry name" value="GLV1-2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21529">
        <property type="entry name" value="GLV1-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753672" evidence="1">
        <location>
            <begin position="27"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="83" mass="9233" checksum="672EB4CACBE9792A" modified="2014-02-19" version="1">MAVSQNKRILLVAFVILCLFSPQTIARTLKEKTNITSGHANTVQHNKESHAEVFKPKDEDVNVGGDVFSMDYTPASRKPPIHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYC9</accession>
    <name>V7AYC9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mini-chromosome maintenance complex-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G142700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYC9"/>
    <dbReference type="SMR" id="V7AYC9"/>
    <dbReference type="STRING" id="3885.V7AYC9"/>
    <dbReference type="Gramene" id="ESW09623">
        <property type="protein sequence ID" value="ESW09623"/>
        <property type="gene ID" value="PHAVU_009G142700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2545">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EEHTEMI"/>
    <dbReference type="OrthoDB" id="329666at2759"/>
    <dbReference type="PhylomeDB" id="V7AYC9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019140">
        <property type="entry name" value="MCM_complex-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13489">
        <property type="entry name" value="MINI-CHROMOSOME MAINTENANCE COMPLEX-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13489:SF0">
        <property type="entry name" value="MINI-CHROMOSOME MAINTENANCE COMPLEX-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09739">
        <property type="entry name" value="MCM_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="156"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="191"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="589" mass="66442" checksum="E7091E72E3FC656E" modified="2014-02-19" version="1">MVGPQYDFLSNPLGAVRSTFDTAIASGTDPSSLEGRDWGALPLFRHFLFEQSRISQVPLLTPTTIRFVRPNTLVRFRGMIQDMPGNEFYVGAYKDGSMWRTNKFMDVLQSPICSSADTRIWERRLLYCVPVPGLSPWTEVSAEEFGNLSMDWMSDSREKRMRDDESSDMPVSCDKVQDSPNTKRMREGEHSSAASHSSGAATDIASSTTSLGSEIVSNSPPCIVKIYDSPESEMKLNDIFEFVGILTSDPELQEDNEDGDLSDGFSEDTLRHFPPNQVPRLHCFIHRKLGIQDFLQNNHTVEPKPDLVKGLREALLRHLTTILGNDDVTSHFMLLHLLSKVHARDNGLAVGKLSLNLTGFKKETVSVFGKQLTLVLKKLLPLTFCIPLTVEYLNTVSLAPKKNYDTNRLETGVLQLAEGSHLIVDETKLEAGTLNSVGVDNCRLLKNLMELQEVEYDFKYYKMDMKTDAQLLVMSEGKSNILPADVIVPFQPSTLSYSEAVTPEVLEAWRWYLATVRQLTHSIEPEMQKVVERDLVAARQADRTLSPQDLSRLVTMGRLMSLSYGESSLSLEHWQMVKELERLRKQRLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1N2</accession>
    <name>V7B1N2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">E2 ubiquitin-conjugating enzyme</fullName>
            <ecNumber evidence="1">2.3.2.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G060900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the ubiquitin-conjugating enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.23" evidence="1"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1N2"/>
    <dbReference type="SMR" id="V7B1N2"/>
    <dbReference type="STRING" id="3885.V7B1N2"/>
    <dbReference type="Gramene" id="ESW11807">
        <property type="protein sequence ID" value="ESW11807"/>
        <property type="gene ID" value="PHAVU_008G060900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0416">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KFYVRFK"/>
    <dbReference type="OrthoDB" id="269518at2759"/>
    <dbReference type="PhylomeDB" id="V7B1N2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23797">
        <property type="entry name" value="UBCc_UBE2H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.110.10:FF:000024">
        <property type="entry name" value="Ubiquitin-conjugating enzyme 5, E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023313">
        <property type="entry name" value="UBQ-conjugating_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24068">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00183">
        <property type="entry name" value="UBC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="10">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="150"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="150"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="160"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="7">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00056190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW11807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="183" mass="21009" checksum="926958293D5A32A3" modified="2014-02-19" version="1">MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVQFHGPKDSPYLGGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRSAYELRVKEYCEKYAKPEDIGEVTEEKSSDEEMSEDEYDSSDEQVVGKADP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7B369</accession>
    <name>V7B369_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G019300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B369"/>
    <dbReference type="SMR" id="V7B369"/>
    <dbReference type="STRING" id="3885.V7B369"/>
    <dbReference type="Gramene" id="ESW11313">
        <property type="protein sequence ID" value="ESW11313"/>
        <property type="gene ID" value="PHAVU_008G019300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0521">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="194358at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030140">
        <property type="term" value="C:trans-Golgi network transport vesicle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035091">
        <property type="term" value="F:phosphatidylinositol binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006897">
        <property type="term" value="P:endocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009965">
        <property type="term" value="P:leaf morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010087">
        <property type="term" value="P:phloem or xylem histogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010051">
        <property type="term" value="P:xylem and phloem pattern formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd08204">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd07606">
        <property type="entry name" value="BAR_SFC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13250">
        <property type="entry name" value="PH_ACAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.220.150:FF:000019">
        <property type="entry name" value="ADP-ribosylation factor GTPase-activating protein AGD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1270.60:FF:000080">
        <property type="entry name" value="ADP-ribosylation factor GTPase-activating protein AGD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.60">
        <property type="entry name" value="Arfaptin homology (AH) domain/BAR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045258">
        <property type="entry name" value="ACAP1/2/3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035670">
        <property type="entry name" value="AGD1/2/3/4_BAR_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027267">
        <property type="entry name" value="AH/BAR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004148">
        <property type="entry name" value="BAR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001849">
        <property type="entry name" value="PH_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23180:SF160">
        <property type="entry name" value="ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN EFFECTOR PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23180">
        <property type="entry name" value="CENTAURIN/ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16746">
        <property type="entry name" value="BAR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00169">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00721">
        <property type="entry name" value="BAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00233">
        <property type="entry name" value="PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103657">
        <property type="entry name" value="BAR/IMD domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50003">
        <property type="entry name" value="PH_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 9" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PH" evidence="12">
        <location>
            <begin position="292"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="domain" description="Arf-GAP" evidence="13">
        <location>
            <begin position="503"/>
            <end position="648"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="9">
        <location>
            <begin position="730"/>
            <end position="762"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="9">
        <location>
            <begin position="763"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="248"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="441"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="789"/>
            <end position="823"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="256"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW11313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="823" mass="92119" checksum="5B3779865C4B0872" modified="2014-02-19" version="1">MQFAKLDDSPMFRKQIQCMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTRERFLSLRKGTKTDVATALEEELHSARSTFEQARFNLVTALSTVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSVRSGSSSQHSGQRNSSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERMLPASPMGSGHHRSTSESSSFESSDFDHSAIEECAADRSLASAHLERPSRSLQQQRSCTKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNTFANSVWEELLQSRSAIQVDLVPTGLSKSDKPLMFFFPKPCQSDSLSVKEKFIHAKYAEKLFVRKPKDNRLSVAQQIWEAVHANDKKAVYRYIVNSDVDVNVAYEQMCNSSLTLAKVMILQEQPSHDHSSTLAGNTLDWSSSKEGQVMDNLDGCTLLHLACETADIGMVELLLQYGANVNASDSRGQTPLHRCILKGRSAFARLMLSRGADPRAVDEQGRTPIELAAESNAGEREVHAPSNDSNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3J7</accession>
    <name>V7B3J7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G115500g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3J7"/>
    <dbReference type="SMR" id="V7B3J7"/>
    <dbReference type="Gramene" id="ESW12467">
        <property type="protein sequence ID" value="ESW12467"/>
        <property type="gene ID" value="PHAVU_008G115500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACKIQRN"/>
    <dbReference type="OrthoDB" id="1918322at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000161">
        <property type="entry name" value="Wall-associated receptor kinase-like 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008:SF25">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="295"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="363"/>
            <end position="644"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="391"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW12467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="655" mass="72007" checksum="B0A9C18EFA1B0B9E" modified="2014-02-19" version="1">MVPLSTFMDQPTIITMLIFTTMALLLSRAEAMRKCGNCGPNPVPYPLSTGPDCGDPWYKIRCTAGTLWFDALAGSSYAIKSIDPSTRRIITRPPTLAPKTCVSTDFRSEGMHLNETLPFSVASGNAIFLFNCTAHAPSMNCSASSACHSYIKEHADFGACGSAGSCCEYRSGGARKEFAIRLHGGECAAYAGFVDLNGTAATVGKRWPESGVGIEWVAPQEPVCKETMDCKELLNSKCGVGPSGGVHRCFCNAGFAWDPINGWCQPQTQTNNTKCTGHGKDSHCKVRKKKKKKMLLAVVVSLGGIVFVLTVIGVLFYKKHNQTKGKAKEAKISKRKEVSSAKANALSSRIFTGREIKKATNNFSPENLIGTGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYELVSNGTLFDYLHRHSCGTTEPLKLHQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEEKLMDVVDPFLKEGASDLELETMKSLGYLAVSCLDDQRQKRPSMKEVADEIEYLIKVIKGQVSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5D8</accession>
    <name>V7B5D8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G162600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5D8"/>
    <dbReference type="Gramene" id="ESW13039">
        <property type="protein sequence ID" value="ESW13039"/>
        <property type="gene ID" value="PHAVU_008G162600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PINAYEH"/>
    <dbReference type="OrthoDB" id="1092270at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14223">
        <property type="entry name" value="Retrotran_gag_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="139" mass="16127" checksum="75AEE347BA8A751F" modified="2014-02-19" version="1">MTKKDKIALLEKAHSAIVLNLGDIVPRQVSKDTTGLWTKLESLYMTESMVNRLYLKQALYSFKMSNDKNIDVQIHDEDQALLLLYAFFKIHDHFKKTLLYGRESLSLEEVQTTSNSKELNKRIDDTNEFQALNCIILLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6V2</accession>
    <name>V7B6V2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein root UVB sensitive 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G125300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RUS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6V2"/>
    <dbReference type="STRING" id="3885.V7B6V2"/>
    <dbReference type="Gramene" id="ESW12583">
        <property type="protein sequence ID" value="ESW12583"/>
        <property type="gene ID" value="PHAVU_008G125300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4249">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="364779at2759"/>
    <dbReference type="PhylomeDB" id="V7B6V2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048653">
        <property type="term" value="P:anther development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006968">
        <property type="entry name" value="RUS_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055412">
        <property type="entry name" value="UVB_sens_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054549">
        <property type="entry name" value="UVB_sens_RUS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12770:SF29">
        <property type="entry name" value="PROTEIN ROOT UVB SENSITIVE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12770">
        <property type="entry name" value="RUS1 FAMILY PROTEIN C16ORF58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24160">
        <property type="entry name" value="UVB_sens_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04884">
        <property type="entry name" value="UVB_sens_prot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein root UVB sensitive/RUS" evidence="2">
        <location>
            <begin position="109"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="Root UVB sensitive protein C-terminal" evidence="3">
        <location>
            <begin position="410"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF24160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="513" mass="57385" checksum="9EEA8E0C3999EB16" modified="2014-02-19" version="1">MPFSLRLSTNLHTPWNLSNSNEPTPPTNQNLSFRRFSPLSSFRTSLDCVSDGGVTKEVPVRLPFVVVRRPNEASRFFWVGNCLQVVTVDGGAAADADVDFDDRVLRVCGSVVREFFIPRGVTGNYVEYVKWKLLHRVFSSALQVLATQAMFTAMGVGFSSSLPSAAALNWVLKDGIGRLSRCIYTASLASAFDTNLKRVRFTTSVLFVASIGLELLTPTFPQCFLLLATIANISKQISLACYLATRSAVHQSFAIGDNLGEISAKAQIQTVCFDILGLMLAAIVNMCIESHRRQQAGLHYLIYPFFAAMDLFGIYQGLKHVHLQTLTKDRLEIILSTWIECGYVPSPAEVSDKEGVNLLGVKGECSWPIRIGCLNPKDQIPKWSMKTIQCITNEDYYFVCVEFFKGLKRTRKQSILVSVREGAEAVHIIMGLLQACYIRRAVLMNSTRWEIIIEESNASDSTMEDWSVIVENAKRSAERDVSNLIDQMVEMGWMVKNILLSTQEQIRYSFVCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7B770</accession>
    <name>V7B770_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">aminocyclopropanecarboxylate oxidase</fullName>
            <ecNumber evidence="9">1.14.17.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G214200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="8">Alkene biosynthesis; ethylene biosynthesis via S-adenosyl-L-methionine; ethylene from S-adenosyl-L-methionine: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.17.4" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B770"/>
    <dbReference type="SMR" id="V7B770"/>
    <dbReference type="STRING" id="3885.V7B770"/>
    <dbReference type="Gramene" id="ESW13649">
        <property type="protein sequence ID" value="ESW13649"/>
        <property type="gene ID" value="PHAVU_008G214200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEYREVM"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009815">
        <property type="term" value="F:1-aminocyclopropane-1-carboxylate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071398">
        <property type="term" value="P:cellular response to fatty acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009693">
        <property type="term" value="P:ethylene biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009835">
        <property type="term" value="P:fruit ripening"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000002">
        <property type="entry name" value="1-aminocyclopropane-1-carboxylate oxidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0266">Ethylene biosynthesis</keyword>
    <keyword evidence="7" id="KW-0292">Fruit ripening</keyword>
    <keyword evidence="6 10" id="KW-0408">Iron</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="11">
        <location>
            <begin position="153"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00037892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00039090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW13649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="36162" checksum="BF96A534D11795F6" modified="2014-02-19" version="1">MSNFPVINFEKLNGEERKDIMEKIKDACENWGFFELVDHGIPHDLLDTVERLTKEHYEKCMEERFKESMASKGLEAIQTEVKDMDWESTFHLRHLPESNISEVPDLVDEYRKVMKDFALRLEKLAEQLLDLLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPPCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWVDVPPMRHSIVVNIGDQLEVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPELLEKEAEEKAQLYPKFVFEDYMKLYADLKFQAKEPRFEAFKESNFDPIATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7L3</accession>
    <name>V7B7L3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G146900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
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    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7B7L3"/>
    <dbReference type="Gramene" id="ESW12843">
        <property type="protein sequence ID" value="ESW12843"/>
        <property type="gene ID" value="PHAVU_008G146900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
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    </dbReference>
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        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
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        <property type="entry name" value="Myb_dom"/>
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        <property type="entry name" value="Myb_TF_plants"/>
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    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999:SF68">
        <property type="entry name" value="MYB DOMAIN PROTEIN 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB8-RELATED-RELATED"/>
        <property type="match status" value="1"/>
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    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="2"/>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
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    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
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        <location>
            <begin position="9"/>
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        </location>
    </feature>
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        <location>
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        </location>
    </feature>
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        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
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        <location>
            <begin position="123"/>
            <end position="143"/>
        </location>
    </feature>
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            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
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        <location>
            <begin position="130"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="268" mass="30828" checksum="85A6F16F133A30CB" modified="2014-02-19" version="1">MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIHCWRRVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEVQIIQLHSRLGYRWSKIASHFPGRTDNEIKNHWNTRIKKKFKLLGLDPVTQKPPIEPKESTDEGRNNTDYPHTCISGGCLQNVEIKSMESDGSREMTKTEGEREEKKVTWDETTELLNNFEMLCSPLELGSWVSQGTNTSTNSLCSSSVSLDDESSYVLENSLEQWVDSMNSILSWDGFNPFDQDIFFSENGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9Y4</accession>
    <name>V7B9Y4_PHAVU</name>
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        <recommendedName>
            <fullName evidence="3">FMP27/BLTP2/Hobbit GFWDK motif-containing RBG unit domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G183000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_008G183000g"/>
    </dbReference>
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    </dbReference>
    <dbReference type="OMA" id="FTHRERN"/>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
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    </dbReference>
    <dbReference type="InterPro" id="IPR045167">
        <property type="entry name" value="Hobbit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15678">
        <property type="entry name" value="ANTIGEN MLAA-22-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15678:SF10">
        <property type="entry name" value="LOCALIZATION AND RNA POL II PROMOTER FMP27 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10344">
        <property type="entry name" value="Hobbit"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Fmp27_GFWDK"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
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        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="FMP27/BLTP2/Hobbit GFWDK motif-containing RBG unit" evidence="3">
        <location>
            <begin position="1165"/>
            <end position="1313"/>
        </location>
    </feature>
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        </location>
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    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
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        </location>
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        </location>
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        </location>
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        </location>
    </feature>
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        <location>
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        </location>
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        </location>
    </feature>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
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        </location>
    </feature>
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        </location>
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        <location>
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        <location>
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    <feature type="compositionally biased region" description="Low complexity" evidence="1">
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    </feature>
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    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
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    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
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    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="2682"/>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="2692" mass="300199" checksum="AE1E3795D427C6B9" modified="2014-02-19" version="1">MEASPINFLHGFTVFCVTLLLVFLLSFVLLSWILSRVLGASVGFCVGGCNSLKDVELKFKKGAVESISIGEIKLSFRRCLVEHGTGFSSWDPKLQLIICNLEVVTRPPIKSSEIKKKKPKKSSGGSSSKGKGKGKWKTISNIARYLSLHVTNIVVKTPKFTLEIGKLNVDISKDRGSDSDLVVRVQILPIVVNISEPQVSNQLSESSDGGSNTSTQASIASTEKTSATFVCEKFSVSCAFGHDREVGIVIRSVDISIGDVTVNSNEGLLERKKSSSESSSDSQKSIGSNVDPKSTKPPTNKQEKIAGYISKFPQKVNFNLSKVNVSFTHRERNLYVENNIMGIQFRNIKSRPTKDGGESTRLHFQLEFGEIHLFKELGSSILEILSVNLVSFVCIPVQSVMLVRADTEIKIGRSKCNIVMSRIKPWLLLKPPNNKKKKLVINETPVVKPKSTDDSKTIVWTCNLSTSELTIRLFTMAGSPLYHGCLKSTHVSANNTSKMGTAVHSELGELSLKMANENQECLGESIFGAESYSANILHITKVSVDWGKKDIKSSEKEAPKCVLGLSAVVTGMGIYLSFERVESFISTAISFQVLLKSLSGPKKKSTQPRAHSSKSSGKGTQMLKFHLEQCSVYVLGETGLENTVVPDPKRVNYGSQGGIVIISVSADGTPRTANVMSTVSSEYRKLKYCISLKILNLKLSVNKEKRSKQVELAKARSIYQEYYDETRPVSKVKLVDIRNIKFVQRLGGLKENAACSLFSATEISLKWEPDVHLSVIELVLQLKLALHNSKLREKGNEQVEDVVSDVKDSNRKNETPPIPSGHSEKKKESVFAVDVEMLNISAELGDGVNATAQVQSIFSENARIGVLLEGLLFNFNGARLVKSSRMQVSRIPSKSAAATSDPKGATIWDWVIQGLDVHICLPFRLELRAIDDALEDMLRALKLIVAAKTNMIFPVKKDSSKARKPSSVKFGCLKFFLRKLTFDIEEEPIQGWLDEHYHLLKKEVGELTVRLNFLDDFISKAKKDPNSTDDTNNSHEEKKIYINDVEVDVNNPSVIESMREDIYRRTFRSYYQSCQNIEFYKGSGAYKNDQLQSGFKLSTSRAVLLSISAENLDVTLTKIEGGEDGMIEILRKLDPVCRELEIPFSRLYGANILLNTSSLVAQIRDYTFPLFAGTSGKCGGRLVMAQQATSFQPQMLQDVFVGEWRKVCMLRSAMGTTPPMKTYTDLTLNFQKGEVSFGVGYEPVFADISYAFTVVLRRANLSVKTPGPLILPPKKEKSLPWWDDMRNYIHGRITLLFSETNWNILGSPDPYEKFDKLVLLTSSMEIQQSDGRIFLSAQDFNIYLTSLESMANKRCTKIPPGVSGAFFEVPVFILDLTMDWGCDSDMPLNHYLFSLPIEGKPREFVFDPFRSTALSIRCSISFRSVHPSSEKQCVSEGDANVHQPPHTSSNASPTINLGAHDVSWLTKFGTLMYLPPYKLRFFSRFPRYGVPRIIRSGNLALDKVITEFMMRIDGTPICVKNVHLHDDDPAKGLTFAMTKLKVEVCFGRGKQKFTFECNRGLLDLVYLGVDLHMPKVFLSKEDCCSIAKLISMTPKSSQAPSKDKNPSEKGFLTQKNPDDGFLLSGDYFTIRKQSPKADPDTLIAWHETGKIHSDKTYVRPQRENRVETNENEQSDPSDEEGYNVIIADSCQRVFVYGLKLLWNIENRNAVCFWAASLSKACAPAKPSPSRQYTQRKLREEKTKQNVAETDQDGAAETTQDDGAEVPPDDGAEVRQNDGAETHQDNGGEISKVDEAESNQDNKAETSQDEGAETHQDEDSLSLNTNNISDSPSSLTAKNPELPSSPSHVDNVDKFPSTKKENSDEPEEGTRHFMVNIVEPQFNLHSEDANGRFLLAAVSGRILAQSYHSVLQVGYEMIEQALSTTNDAQNSEYQPEIAWKRWELSVMLEHVQAHVAPTDVDPGAGVQWLPKIRRGSPKVMRTGALLERVFMPCDMFFQFTRHKGGTPELKVKPLKELTFNSHNITATMTSRQFQVMLDVLCNLLLARVPKPRKSSMSLFAEDDEDNEEEADEVVPDGVEEVELEKINLEKKERDQNLILDDVRKLCLWFDLSRNSHPEEEADLWMIDGGIDKLVQELKKEHVNARKFRKEAYASLRVAMQKAAQQRLLEKEKNKSPSYAMRISMQINKVVWTMILDGKSFAEVEINDMIYDFDRDYKDVGISLFTTKFLIFRNCLSNAKSDTILSAWNPPPDWGKKVMVKLDARQGAPKDGNSPFELFQVEIYPLKIHLTETMYRMMWVYFFPEEKKDSQRRQEVWKVSTTAGARRMKKGSADGSASGSDAPPARTGISAMLFPTANPLASQVDSAQASKAQNAKANPATGPTPELKRSSSSDKTKDENVAESAADDLVSQDEASKNKLKDSKGVKAGTSSVEEKRVAVPQEEKKARPQKIMEFHNIKISQVELCVTYEGSRFVVSDMKLLMDQFHRAEFTGTWRKLFSRVKKHIIWGVLKSVTGMQGKKFKDKGQIQLPSSSGPELDVTSIDNEGQAGKSDKLPPSFPKRPTDGAGDGFVTSIKGIFSNQRRKAKAFVQKTIKNEGENEVQGDLNENDSEISPFARQLTISQAKKLIRKHTKKLQAKGQKGSPLLQTVEAGSPLQQTVEALPSSPTKEETMLFDSDSSSDSSSDESLQEPVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAP5</accession>
    <name>V7BAP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pre-mRNA-splicing factor 38</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G239200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for pre-mRNA splicing.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the PRP38 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAP5"/>
    <dbReference type="STRING" id="3885.V7BAP5"/>
    <dbReference type="Gramene" id="ESW13938">
        <property type="protein sequence ID" value="ESW13938"/>
        <property type="gene ID" value="PHAVU_008G239200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2888">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERSHKHD"/>
    <dbReference type="OrthoDB" id="3881at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005037">
        <property type="entry name" value="PRP38"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024767">
        <property type="entry name" value="PRP38_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23142">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR 38A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03371">
        <property type="entry name" value="PRP38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12871">
        <property type="entry name" value="PRP38_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor 38 C-terminal" evidence="9">
        <location>
            <begin position="186"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="173"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="185"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="229"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="248"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="350"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="397"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU367025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW13938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="437" mass="51788" checksum="7226A6EFCC94F724" modified="2014-02-19" version="1">MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSHLEKMKLPTTHSGSTGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIRRSPSRRSQSREYPDRDRERERSRSRDRERDHDRERDRERDRYRDRDRNRERERDRDRERYRERDSDRDQERDRIRRDKDRERDRERSYDYDRRSKPTERESSRDYDNGSRHYRRSRSRSRSRSRSQSLQAGTARYESCSSPPGDGSKRTSASSNLAKLKDMYGDLGDNKRDINMEKIPRKDSGGEEVIRLGGSTWKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB15</accession>
    <name>V7BB15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">LOB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G249100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOB domain-containing protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB15"/>
    <dbReference type="SMR" id="V7BB15"/>
    <dbReference type="STRING" id="3885.V7BB15"/>
    <dbReference type="Gramene" id="ESW14053">
        <property type="protein sequence ID" value="ESW14053"/>
        <property type="gene ID" value="PHAVU_008G249100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUQH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANSMVYE"/>
    <dbReference type="OrthoDB" id="1927167at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004883">
        <property type="entry name" value="LOB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301:SF87">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03195">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50891">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LOB" evidence="4">
        <location>
            <begin position="61"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="141"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="204"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW14053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="28468" checksum="6BE3BE5D8640F115" modified="2014-02-19" version="1">MKQNLSPSQHTLIKKIKRHVWTSRDRLDEITKIRAEVEASSQMGRKHFYGPIPGITLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFVAVHKVFGASNVSKMLLEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIREEILKYKYREAASLISSNHAALVSSADAISAAIPANSQPQGLSQLPPPPLPKQLPAPPLKPLPSPSVILSSFSSSSTSSVYTPKSSMSLGSISTTENVPYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBU5</accession>
    <name>V7BBU5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3-ketoacyl-CoA synthase</fullName>
            <ecNumber evidence="6">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G064000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a very-long-chain acyl-CoA + malonyl-CoA + H(+) = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:32727"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:90725"/>
            <dbReference type="ChEBI" id="CHEBI:90736"/>
            <dbReference type="EC" id="2.3.1.199"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBU5"/>
    <dbReference type="SMR" id="V7BBU5"/>
    <dbReference type="STRING" id="3885.V7BBU5"/>
    <dbReference type="Gramene" id="ESW15332">
        <property type="protein sequence ID" value="ESW15332"/>
        <property type="gene ID" value="PHAVU_007G064000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRZR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKKGPWA"/>
    <dbReference type="OrthoDB" id="329835at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036417">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="FAE" evidence="8">
        <location>
            <begin position="73"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="9">
        <location>
            <begin position="374"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR036417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW15332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="482" mass="54166" checksum="2B0BB443F71670A8" modified="2014-02-19" version="1">MEAISNNLPLPHAILPHPFSLLANHLLSKLSIFLWPFIFSLQTFLLLQNSKLMFHFVLLCFLLLCFLLKHFLSKPSPIYLVDFSCLKPPSHCRVPFATFIENASMWEVFDTESIDFMDKILHSSGQSEETCLPPALHYIPPKTHHTESIKEVQMVLFPILDDLLAKTNVSPLDIDILMINCSGFCPSPSLTSLVIGKYSMRSDIKSYNVSGMGCSASALCIDMAQNLLRVHKNSNALLLSTEILSTGWYSGNEKSKLLINCLFRMGSAAILLSNKKAANKTAKYRLVRTRRAQRAFDDKAYFSAFREEDSDGKLGVTLKRDLLNVAGETLRANISILGCDILPLSEKFRCGVSVIKKKFLKSDQTYVPNFKTVIQHFCLPCSGRPVIREIGKGLKLSERDIEPALMTLHRFGNQSSSSLWYELAYLEAKERVHKGDKVWLLGMGSGPKCNSVVFQCISPIVGEYKKGPWADCIHQYPIITMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDC8</accession>
    <name>V7BDC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Conserved oligomeric Golgi complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G1052000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the COG1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDC8"/>
    <dbReference type="STRING" id="3885.V7BDC8"/>
    <dbReference type="Gramene" id="ESW15824">
        <property type="protein sequence ID" value="ESW15824"/>
        <property type="gene ID" value="PHAVU_007G1052000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2033">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNPRRQT"/>
    <dbReference type="OrthoDB" id="46189at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017119">
        <property type="term" value="C:Golgi transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006891">
        <property type="term" value="P:intra-Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033370">
        <property type="entry name" value="COG1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31658">
        <property type="entry name" value="CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31658:SF0">
        <property type="entry name" value="CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08700">
        <property type="entry name" value="VPS51_Exo84_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="14"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="790"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="790" mass="88018" checksum="4D2A622E49F248F0" modified="2014-02-19" version="1" fragment="single">MRVSSPAAAAPSPHADDHRISNLGSRDAESLFRTKPIAEIRKTEAAMRGQIEDKKEELRQLVGNRYRDLIDSADSIVRMKASCNGISGNIAAVHGRIRSLSLSQSQSQAKLHSQSRAWTYGAACRVKYLADTPENIWGCLDEGMFLEAASRYVRAKNVHYHLFVDSDDKKKKFLSNFAMLQHQWQIVESFRAQISQRSRDRLLDRGLAIAAYSDALAAVAVIDELEPKQVLGLFLESRKSWILQALGNAGPGDASSLVVSVLCDVLGIIQVTVGQVGELFLQVLNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWKSFRDRLESIMVMLDKRYIADTCFSWLRECVSKISGRNLTDAIGSGQDLASAEKSIRETMESKQVLQESLEWLKSVFGSEIELPWSRIRELVLEDDSDLWDEIFEYAFLGRMKSIIDLRFRELTGAVDVVNSISAVGELFTKLDDVQVYLNRPSTAGGVWFLESNARKTGVSSGFKVQPEESEFHSCLNAYFGPEVSRIRDAVDVSCQSILEDVLSFIESPKASQRLKDLAPYLQSKCYECVSSILMTLKQELDSLYAPAENSESPTAVTVEKSLFIGRILFAFQNHSKHIPLILGSPRFWASGNASTVGKLPSLVKQSRFASDSVICDSPGRQASLGSKKKNSSSIAALLGMREGASPELEELNKTIGDLSIRAYNLWILWLSDELSATISRDLKQDDALSLSTPWRGWEDIVVKQDQSDENQSEMKISLPSMPSLYIISFLFRACDEVHRVGGHVLDKKILHKLASRLLEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEG0</accession>
    <name>V7BEG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G137500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEG0"/>
    <dbReference type="SMR" id="V7BEG0"/>
    <dbReference type="Gramene" id="ESW16209">
        <property type="protein sequence ID" value="ESW16209"/>
        <property type="gene ID" value="PHAVU_007G137500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RINLTCP"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045899">
        <property type="entry name" value="ATL71-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46719">
        <property type="entry name" value="TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46719:SF14">
        <property type="entry name" value="TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756624" description="RING-type domain-containing protein" evidence="2">
        <location>
            <begin position="25"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="88"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="15412" checksum="CF0FE36D76242A68" modified="2014-02-19" version="1">MNSSEESVLLLVSFIILTLVVTLAAYLCSSDIPRTVPSVPVAVTHSNHTTITVEAPEPCIDQSVCRFPSLQFSKAKLCSSTSSSSSSCSICLMDYKECDSLRVLPACGHFFHVKCVDPWLRINLTCPVCRTPITLSDVSKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BER7</accession>
    <name>V7BER7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PB1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G032500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homodimers and heterodimers.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7BER7"/>
    <dbReference type="Gramene" id="ESW14961">
        <property type="protein sequence ID" value="ESW14961"/>
        <property type="gene ID" value="PHAVU_007G032500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWE0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHAGAHY"/>
    <dbReference type="OrthoDB" id="774308at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd06410">
        <property type="entry name" value="PB1_UP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053198">
        <property type="entry name" value="Gynoecium_Dev_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000270">
        <property type="entry name" value="PB1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066:SF27">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066">
        <property type="entry name" value="OS05G0427100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00564">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00666">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PB1" evidence="3">
        <location>
            <begin position="47"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="238"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="351"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="474"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="582"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="705"/>
            <end position="727"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="260"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="371"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="383"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="399"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="428"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="582"/>
            <end position="592"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="708"/>
            <end position="727"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW14961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="727" mass="79108" checksum="7CEC6E6F3DAC237C" modified="2014-02-19" version="1">MEVQPPTPSTAPPPPPPHLNYPDSVESSPRSRNTDSWDEPFAPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVAERATSLADLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAAAATSVIKPSRIRLFLFATKPDSTHSIPSQILDTSTKSDDWFLNALNGNGVPNRGFSDSASVNCLVDLDDEVAGNNLEPGSKDAGEGGAGAGVGGGASLGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKVMGIEEQFAQMGVGVGQKQQDEGFVLLSSPPPPSVPATLSAVGVPIGPPTIVVGDYLNRVVSDDERSDHGVPVGYRKPPTPQPQVQTQTQSQTQALAPQFQQKSTGGSGGVVDLPSPDSVSSDSSLANSISRQKPAVYQEQVQIQSGTTRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGYLLQQQFEQHQQSHQLPQQQFEQHQQALSQQQFEQHQQALSQQQFEQHQQGLPQQQQQFIHGTHFIHHNPAISAYYPVYPSQQHQQHPQHPQLYYVHTRQPQAYNLPVQQANMGESAGNLASSRPQTPPNPATLVPQSAAYNPMRNSPMPKTEMNAYRAATAGSPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAPQPNYAFDYADPAHAQIYYSQPLPPTMPSQYQTMTAAAVMMQEGSAQHPSDSLKQQIRTSQPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGI6</accession>
    <name>V7BGI6_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G202200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ESW17004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGI6"/>
    <dbReference type="SMR" id="V7BGI6"/>
    <dbReference type="STRING" id="3885.V7BGI6"/>
    <dbReference type="Gramene" id="ESW17004">
        <property type="protein sequence ID" value="ESW17004"/>
        <property type="gene ID" value="PHAVU_007G202200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY2C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPSNQRT"/>
    <dbReference type="OrthoDB" id="1647165at2759"/>
    <dbReference type="PhylomeDB" id="V7BGI6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11444">
        <property type="entry name" value="bHLH_AtIBH1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044549">
        <property type="entry name" value="bHLH_AtIBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044660">
        <property type="entry name" value="IBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059002">
        <property type="entry name" value="IBH1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124:SF46">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124">
        <property type="entry name" value="TRANSCRIPTION FACTOR IBH1-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26576">
        <property type="entry name" value="IBH1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="120"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="197" mass="21860" checksum="FF102E82BD2B24FD" modified="2014-02-19" version="1">MESFEPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSDAEQRIYSRRLVEALRRTPSSAAKPRAAGQVREAADRVLAATARGRTRWSRAILRRWRKLRTPHKKAKKTSSTGLKRTRINGGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGIDGGALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIT8</accession>
    <name>V7BIT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Albumin-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G276300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIT8"/>
    <dbReference type="SMR" id="V7BIT8"/>
    <dbReference type="Gramene" id="ESW17879">
        <property type="protein sequence ID" value="ESW17879"/>
        <property type="gene ID" value="PHAVU_007G276300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QSAYIEY"/>
    <dbReference type="OrthoDB" id="756060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.110.10.10">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036375">
        <property type="entry name" value="Hemopexin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018487">
        <property type="entry name" value="Hemopexin-like_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00045">
        <property type="entry name" value="Hemopexin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00120">
        <property type="entry name" value="HX"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50923">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51642">
        <property type="entry name" value="HEMOPEXIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="115"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="168"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="226" mass="25290" checksum="C9825F2D02D1B491" modified="2014-02-19" version="1">MAYINAAFRSSKDYEVYFFIKDKYVRVQYTPGKLDDKILTSLRLISTGFPVFKGTVFAEPGIDGSFDTEGSEAYVFSTNQSAYIEYTPGATNDKILSGPATIAETFPVLKNTVFEDGIDSAFRSTIGKEVYIFKDNQYTRIDYDSKQLVGTIRKITDGFPVLKDTIFESGIDASFASHEESEAYLFKGDQYVRIKFTPNATNDVLLSDIKPIVDGWPCLKDILPVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLT7</accession>
    <name>V7BLT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Cysteine-rich receptor-like protein kinase 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_006G084700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLT7"/>
    <dbReference type="SMR" id="V7BLT7"/>
    <dbReference type="Gramene" id="ESW18949">
        <property type="protein sequence ID" value="ESW18949"/>
        <property type="gene ID" value="PHAVU_006G084700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWMW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLQPTMP"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000336">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000177">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000014">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000017">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052059">
        <property type="entry name" value="CR_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47973">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0675">Receptor</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="309"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="14">
        <location>
            <begin position="75"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="14">
        <location>
            <begin position="182"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="366"/>
            <end position="650"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="661"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="663"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="395"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW18949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="681" mass="75520" checksum="0B3DA35EF136E6B0" modified="2014-02-19" version="1">MVEHSLVAKMIITIILKPDTLKASLLKSQFLIKPIHFLSNTIQAQSVMLQLKVVALILIWWSSNGVEDAVAAKDAHLVNMGCSSFNASDLRSFFANINETFSDMREEIINQSKHFGTVQKARGEVLTYTMFQCRNYLSKNDCLSCFNNATTQIRNCSGGNGARVIYDSCFLRYESNRFYDQTNEIGSGVSCGNISSTVPDFKVAGEQALMDLQTATPKTTDFYAATKTLVAGGSAVYAVAQCVETATAINCQNCMQVGYNNLQSCLPNTEGRAYDAGCFMRYSTTPFFADNQTIDIAPYLKKGNSNKKWAIIGGVVGGVVLLLLLFAWRMSRKRNKVPRGDILGATELKGPVNYKYNDLKAATKNFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVFGKSSNMEDNFEGEVKLISNVHHRNLVRLLGCCSKSQERILVYEYMANKSLDKFLFGNKKGSLNWKQRSDIILGTARGLAYLHEEFHVSIIHRDIKTANILLNDDLQPKIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAMHGQLSEKADTYSYGIVVLEIVSGHRSTDVKDDEDGEYLLRRAWKLHERGLYLELVDNAIDPNEYDVEEVKKIIEIALLCTQASASTRPTMSEVVMLLKSKSLMQHLQPTMPVFVETNMIPRESNSTSSSNATVSISIPSAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMX5</accession>
    <name>V7BMX5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G036600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMX5"/>
    <dbReference type="SMR" id="V7BMX5"/>
    <dbReference type="STRING" id="3885.V7BMX5"/>
    <dbReference type="Gramene" id="ESW18388">
        <property type="protein sequence ID" value="ESW18388"/>
        <property type="gene ID" value="PHAVU_006G036600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSYG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HTENPIQ"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF175">
        <property type="entry name" value="SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="446" mass="49978" checksum="39DCA1039251ADEA" modified="2014-02-19" version="1">MVSIVGSYNVTPNQPTPTEPLWLSDSDQIGFLGHVPNIFIYKAKHTENPIQRMRNSLSKTLVHYYPVAGRLRLTKADRMEVDCNAKGVTLIEAQSTKSFADYGDFSPSDSTEELVPKVDYTQHIEEIPLLLLQVTRFHGGEGLALGVVISHPLTDASGIIRLVNNWAKVARGEELLPNEIPFLDRRGLILLPQHSSPDVKLPEWKPVPRTPQMEQKKRSALLLKLTSSQVEMLKKKANEKASKEGVRPYTSFEVVAAHIWRCAAKARESGENHPTFVRFSVDFRSRLNPPLPQNYFGNALAKGVTPKCYEGDIISNPLGFSAEKIREAAHAVTDEFIRSQLKGSLGQGQQDHIRAFFKGQGHLMNVPYAGNHNILLTSLTTMPVYEADFGWGKPMHYGIAQVFQEDRALIVRSPHGDGVLVTIFFQTALMQPFQKFFYEDLFVSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN21</accession>
    <name>V7BN21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">VQ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G002700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN21"/>
    <dbReference type="STRING" id="3885.V7BN21"/>
    <dbReference type="Gramene" id="ESW17971">
        <property type="protein sequence ID" value="ESW17971"/>
        <property type="gene ID" value="PHAVU_006G002700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4XE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTHHGRF"/>
    <dbReference type="OrthoDB" id="1726347at2759"/>
    <dbReference type="PhylomeDB" id="V7BN21"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008889">
        <property type="entry name" value="VQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039609">
        <property type="entry name" value="VQ_15/22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179:SF29">
        <property type="entry name" value="OS06G0666400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179">
        <property type="entry name" value="VQ MOTIF-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05678">
        <property type="entry name" value="VQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VQ" evidence="2">
        <location>
            <begin position="119"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="179"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="88"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="107"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="241"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="276" mass="30508" checksum="2D94039357C5B5E9" modified="2014-02-19" version="1">MKNHHKYQPQCTTFFPSYSNQTLKSKNQKKRVFLPSSFLLPSLAMTQTMSGPNDWLQFYNQNLTSSIPDFAVTPTTTTTATVTAPSDLPNTSPSASTHLGAEGRVGKPTRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPNAPFAPSPSPGPQALPNLLGFGFPSRPIPSLSPSPLLMSSSPPLGYHHLQQRGQPHQPQQQQHMFQQQNQHYNLYSDGGSQGEHHQHHNNNNMFFQRLSSNPMSPPTSNVVVSNNNRDGVVDLDQGPFFPNTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNM0</accession>
    <name>V7BNM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Tudor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G138400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7BNM0"/>
    <dbReference type="STRING" id="3885.V7BNM0"/>
    <dbReference type="Gramene" id="ESW19594">
        <property type="protein sequence ID" value="ESW19594"/>
        <property type="gene ID" value="PHAVU_006G138400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1525">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NPSEYDW"/>
    <dbReference type="OrthoDB" id="200660at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035825">
        <property type="term" value="P:homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007064">
        <property type="term" value="P:mitotic sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd19953">
        <property type="entry name" value="PDS5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd20404">
        <property type="entry name" value="Tudor_Agenet_AtEML-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000420">
        <property type="entry name" value="Sister chromatid cohesion protein PDS5 isogeny B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039776">
        <property type="entry name" value="Pds5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12663">
        <property type="entry name" value="ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12663:SF67">
        <property type="entry name" value="HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20168">
        <property type="entry name" value="PDS5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63748">
        <property type="entry name" value="Tudor/PWWP/MBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0498">Mitosis</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1124"/>
            <end position="1148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1197"/>
            <end position="1365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1421"/>
            <end position="1663"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="485"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1129"/>
            <end position="1148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1197"/>
            <end position="1209"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1211"/>
            <end position="1227"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="1234"/>
            <end position="1246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1305"/>
            <end position="1336"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1479"/>
            <end position="1492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="1525"/>
            <end position="1547"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1551"/>
            <end position="1567"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1582"/>
            <end position="1600"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1607"/>
            <end position="1617"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="1649"/>
            <end position="1663"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1663" mass="186589" checksum="6C972EF696C3E37B" modified="2014-02-19" version="1">MAQKPHLLLEELGSKLESLPSSYDALIELLQQAASCLTDLDQSPSASTLESMKPFFSAIVKPELLKHQDSDVKLLVAICVCEITRITAPEAPYSDDVLKDIFQLIVGTFSGLSDTSGPSFDRRVAILETLAKYRSCVVMLDLECDDLVNEMFSTFFAVARDDHPESVLSAMQTIMAVLLEESEDIHPDLLSILLSTLGRDKRDLTGAARKLSMNIIQQCMEKLEPSIKQVLLSLISGDSKEINSQVQYHEVLYDLYCCAPQILYEVLPYVTGELMTDKLETRLKAVNLVGDIIALPGSSIAEALQTTFSEFLKKLTDRDFGVRMSVLEHVKSCLLSNPLRAEAPQIFSALSDRLLDSDEKFRKEVVDVICDVACHTLNAVPHETVKLVAERLCDKSLLVKTYTMGRLAEIYRVFCENSSNTVNPSEYDWIPGKIIRCFYDKDFRSDIIESILCESLFPSEFSINDIVKRWVGIFSRFDKVEVKALEKILEQKQRLQEEMRKYLALRQSSQGKDIPEVQKKIVFCFRVMSRSFADPTKAEESFQILDQLEDPNIWKILKDLVDPNTSFHQTRVYRDDFLKILGENHRLYEFLNAFYIKCSYLLFNKEHVKAILSEIITHKSSENDQDIQYCMNILVIIARFCPYLFRGTDEALVNLLKDNSDMIKEGVLNVLAKSGGTIREQLAITSSSVELMLERLCLEGSRRQAKYAVHALVAITKDDGLKSLSVLYKKLVDMLEEKTHIPAVLQSLGCIAQTAMPVFETRESEIEEYIINKILKSDSKEDHSRISWDDRSDLCVLKIYGIKTLVKSYLPVKDAHVRHGIDGLLGILRNMLSYGEISKELQSSSVDKAHLRLASAKAVLRLSGLWDHKIPVDIFHLTLRTTEIGFPQAKKVFLSKVHQYIKDNLLNAKYACAFIFNIFGSKDSKPEEFAEDKRNLNDIIHMHHQARAWQLSGQSDANSLTTYPEYIVAYLVHALANISCPDIDDCKTVEAYDNLYRQLHLILSMLVQRDDDVKSEEAINNEKEIISTITSIFWSIKQSEDVVDASKSKNSHAICDLGLAITNRLVPKEVDLQALSPSVSPPPMLYKACEKESGPVVSKEKSWLADESVLAHFESLELEKVSSQLAEDDTSKDGEKDRKEMSLGKIIKDIKSKGTKGKRVKKKKAVPAETKKAENDIDILNVVRQINIDNLGLSTNFESSNGHENSSSKKLQKDPERATIKKRKGEDLTLVPVPKRKRSSFVHGKSRPSSNTSKAPPRVSGEDSSRVKLLSGAEFNPDTDSKTIQRKKAKGNEPSIQAKVKASKNYHDDSDKSKEHDMKSPDNSKPTDKSKSDKFKSSTGSAKKLKRKSIGGLAKCTTKESESDAEDLMGCRIRVWWPLDKKFYEGTIKSYDSSKRKHVILYDDEDVEVLYLEKERWELIDKGGKPNKKLKPSKTVSSREVSTGKKQRSSSASASKKTKQIVNGKSPNKQVKHGQKGASKIDFHHEHAKESSDLSNPEDTLISKAGINSGGSEAEQAEGSDVIITKRKKISKKAKSVLRGKKPKKGKSSSYKKESDQEKQGYGERLSKGSVPQGDQNDDAESSSKEIDVNESRGALRENDIGEESGSEGNQNDSYGKSSPREVEKSLVESASPDGAKIAEVSDDEPLSKWRRPSGKKISGQKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNT0</accession>
    <name>V7BNT0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G062700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNT0"/>
    <dbReference type="SMR" id="V7BNT0"/>
    <dbReference type="STRING" id="3885.V7BNT0"/>
    <dbReference type="Gramene" id="ESW18700">
        <property type="protein sequence ID" value="ESW18700"/>
        <property type="gene ID" value="PHAVU_006G062700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1293">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KGTDQHV"/>
    <dbReference type="OrthoDB" id="5559898at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034657">
        <property type="term" value="C:GID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043161">
        <property type="term" value="P:proteasome-mediated ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000416">
        <property type="entry name" value="Armadillo repeat-containing protein 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000440">
        <property type="entry name" value="Armadillo repeat-containing protein 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038739">
        <property type="entry name" value="ARMC8/Vid28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000357">
        <property type="entry name" value="HEAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15651">
        <property type="entry name" value="ARMADILLO REPEAT-CONTAINING PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15651:SF7">
        <property type="entry name" value="ARMADILLO REPEAT-CONTAINING PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00514">
        <property type="entry name" value="Arm"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02985">
        <property type="entry name" value="HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50176">
        <property type="entry name" value="ARM_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="97"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="437"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="653" mass="70725" checksum="2B67C2A4E815700E" modified="2014-02-19" version="1">MPTPSASSATGLSSSDPILDRLASSDGAVKFIAIRELKNHIIGNRTKKLSYIKLGAVPAVAAALADSDPNLIVQSAAALGSFACGVDAGVRAVLDAGAFPRLIGLLSAPDEKVLDAAARTLRMIYQSKLAPKYDFFQEENMQFLLSLLKSENENLTGLGAGIVIHSCKTIGEQNILCHTGVLEKLTSLLDGSLSQRDASLESLAAIIRDNPAAVSNFVELRCGRALHCVTELTKDKYPRTRLLACLCLISLKNSSTCYLQDIGIKTKLVYILLELLDDSGPVGDEASFAFSSLIAEKEDLQKLAFEANAINKFNCLLQKHPIQPKRLEGVLLALADLCSKLECCRSNFLSLQVLNLVIDALTHEDASVRTAACICLRSVSRSIKNLSAGRFMNERVVFPLVQLLSDLSTSVQVAALGAICNIVVDFLPHKSTFVQCGGIKELVQLTKSMDSSLRLNAVWALRNMVFLADKICKEGVFVELTASSMASLICDPEPSVQEQALALVRNFVDGCLYSVEHAFAEDGIILDAVGRQLKKSSKIEIGIQGMYILSNIASGNEFHKEAVMHLLFPQDENGSHSFFEQFLQSPDSRLRTAAVWVVVNLTFPASPGAFGRIVNLRSFGIVSRIKKMVNDSCMDVKLRARLALGQIIAFGDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPG0</accession>
    <name>V7BPG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein bL17c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">50S ribosomal protein L17, chloroplastic</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">CL17</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G082300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bL17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPG0"/>
    <dbReference type="SMR" id="V7BPG0"/>
    <dbReference type="STRING" id="3885.V7BPG0"/>
    <dbReference type="Gramene" id="ESW18918">
        <property type="protein sequence ID" value="ESW18918"/>
        <property type="gene ID" value="PHAVU_006G082300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3280">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WKSFESG"/>
    <dbReference type="OrthoDB" id="275000at2759"/>
    <dbReference type="PhylomeDB" id="V7BPG0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1030.10:FF:000001">
        <property type="entry name" value="50S ribosomal protein L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1030.10">
        <property type="entry name" value="Ribosomal protein L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01368">
        <property type="entry name" value="Ribosomal_bL17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000456">
        <property type="entry name" value="Ribosomal_bL17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036373">
        <property type="entry name" value="Ribosomal_bL17_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00059">
        <property type="entry name" value="L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14413:SF16">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN BL17M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14413">
        <property type="entry name" value="RIBOSOMAL PROTEIN L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01196">
        <property type="entry name" value="Ribosomal_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64263">
        <property type="entry name" value="Prokaryotic ribosomal protein L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00072708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00077677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00082728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW18918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="219" mass="24230" checksum="2E376AE26B0C08FE" modified="2014-02-19" version="1">MASVSVMATSSDNRWSMASLRSALPSPSPPSLSSSVRFSVSSSSSSSTMKLRISRTKPKSLLTTFTGLAPLNLLFLSAPSSASEYTGCDHSFTIIDNGGRVSAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQB4</accession>
    <name>V7BQB4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mediator of RNA polymerase II transcription subunit 16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G1876001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQB4"/>
    <dbReference type="STRING" id="3885.V7BQB4"/>
    <dbReference type="Gramene" id="ESW20182">
        <property type="protein sequence ID" value="ESW20182"/>
        <property type="gene ID" value="PHAVU_006G1876001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCCPRAL"/>
    <dbReference type="OrthoDB" id="2020837at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016592">
        <property type="term" value="C:mediator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038836">
        <property type="entry name" value="MED16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35130">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35130:SF1">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="728"/>
            <end position="763"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="849"/>
            <end position="914"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="736"/>
            <end position="763"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="849"/>
            <end position="863"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1151" mass="124649" checksum="36F4A66C86DE2546" modified="2014-02-19" version="1" fragment="single">AVSWCGKLNAIACASETCARIPSSTGNPPFWIPIHIMIPERPTECAVFNVIADSPRDSVQFIEWSPTCCPRALLIANFHGRVTIWTQPSQGPANLVLDTSCWLREHEWRQDIAVVTKWLSGVSLYRWFSSKQSAPANSRSTFEEKFLSQQCQTSARWPNFLCVCSVFSSGTLQLHWSQWPPPNATPPKWFCSSKGPLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGFQVIPRTSTNNSVPPPISSPNWIGFAPLAAYLFSWQDYQLSEEKQGKNQTNQNLGGSIPLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTCGGSVIAVVIAEGQYMSPYDPDEGPSITGWRVQRWESSLQHVVLHPIFGNPTSSMGGQPPMQTVWQTKVDLSIPPTNDFKNHQAPAGGMNTDIQKVAEFGFDKSKRVYFDPFDLPSDVRTLARIVYSAHGGEIGIAFLRGGVHIFSGPNFAPIDNYQIGVGSAIAAPAFSSTSCCSASVWHDTSKDQTILKIIRVLPPAIPSSQVKTNSSYWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSAQHRQQYCPSLDRIKCRLLEGANAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDPWQVSSETLSSIDPEAVAVEPALVPCVQAYVDSVLDLASHFITRLRRYASFCRTLASHAVTAGSGNNRNVVASPTQSSATPATSQGGQNGTTSSSGSTQMQAWVQGAIAKISNTTDGVSNPAPNPPISGPSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRYVGGVQRTTDTNTQKPQSSASAPGKVEETVKPGSTLARPDDGQAGRVNQLVPAPKGGEEPSPGRSRIGTGNAGQGYTFEEVKVLFLVLMDLCRRTAGLQHPLPVSQVGSNNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDLDDLDSTNEAPKLVNLDFSSLKSCDVYDGANGLLPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSPNDRDIWWISRWAHGCPICGGTWVRVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQE2</accession>
    <name>V7BQE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lysine ketoglutarate reductase trans-splicing-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G190100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQE2"/>
    <dbReference type="STRING" id="3885.V7BQE2"/>
    <dbReference type="Gramene" id="ESW20212">
        <property type="protein sequence ID" value="ESW20212"/>
        <property type="gene ID" value="PHAVU_006G190100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW20214">
        <property type="protein sequence ID" value="ESW20214"/>
        <property type="gene ID" value="PHAVU_006G190100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQAA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="9985979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007877">
        <property type="entry name" value="DUF707"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31210">
        <property type="entry name" value="OS06G0731900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31210:SF47">
        <property type="entry name" value="OS07G0564800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05212">
        <property type="entry name" value="DUF707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW20212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="407" mass="47318" checksum="FE6B18CC4BAAC354" modified="2014-02-19" version="1">MTSIKSLRWLMRKKSGLSDGGKSSFKIKQLPFMALLCTVMLFIVYRTTKYQYHQEEIDKKWSFWGQPKVYPSTSGKLKGLPRGIIHADSDLELRPLWSRSSSRSKASVSSNRNLLAVPVGIKQKQNVDVMVQKFLRENFTIILFHYDGTVDGWLNLGWSSQAIHIVAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVEHFSPSRYVEIIKQEGLEISQPALDPNSTEIHHRITIRARTKKFHRRVYERRGSTRCSDSSEGPPCTGFVEGMAPVFSRAAWYCTWHLIQNDLVHGWGVDMKLGYCAQGDRTKNVGVVDSEYVFHKGIQTLGGSGHRMTKVSNLHSKRQSGTGIDVRTEIRRQSTWEFEMFKERWNEAISQDKNWVDPFKSDQRRIRKRRDTKHVTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSI1</accession>
    <name>V7BSI1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein FAR1-RELATED SEQUENCE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G132500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Putative transcription activator involved in regulating light control of development.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the FHY3/FAR1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSI1"/>
    <dbReference type="STRING" id="3885.V7BSI1"/>
    <dbReference type="Gramene" id="ESW19526">
        <property type="protein sequence ID" value="ESW19526"/>
        <property type="gene ID" value="PHAVU_006G132500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS51">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCLSNNY"/>
    <dbReference type="OrthoDB" id="641338at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004330">
        <property type="entry name" value="FAR1_DNA_bnd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031052">
        <property type="entry name" value="FHY3/FAR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006564">
        <property type="entry name" value="Znf_PMZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669:SF228">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03101">
        <property type="entry name" value="FAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00575">
        <property type="entry name" value="ZnF_PMZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="8">
        <location>
            <begin position="589"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="53"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="179"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="16"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="56"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="707" mass="81507" checksum="E8B8B19FA49610B8" modified="2014-02-19" version="1">MTDDTMCSPSDKDLSLSPNLDITIDDSSPNSEQLLDIVDEGNELDNECGQLFDIDGSERENGRDETTVVDSHSGESQGKDCPPPVVGMEFDTYDDAYNYYNTYAKEIGFATRVKSSWTKRNSKEKRGAVLCCNCEGFKTTKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDSRAKRKVEPTLDVEVRTIKLYRMPVVDASGYGSSNSTEGGTSNHINCSKRLKLKRGDLELISNYFCRIQLTNPNFFYVMDLNDDGQLRNVFWIESRSRAAYSYFGDVVAFDSTCLSNNYEIPLVAFVGVNHHGKSVLLGCGLLADETFETYIWLFRAWLTCMTGRPPQTMITNKCKALQSAIAEVFPRAHHRICLSQVMQSILGCFVQFQEYEAFQIALTKVIYDSKTVDEFERAWDDLTQHFGIRNHEKILTLHEEREHWAPVYSKDTFFAGISDYEKGESVVPFFKGHVHQQTSLKEFFEIYELVQQKKHKTEVLDDFESCDLSSLLKTRCYYELQISKLYTNAVFRKFQDEVVMMPSCFSITQTQTSGSVVTYMVKEREGEDPATDARHFEVIYDKGGTEVRCICSCFNFKGYLCRHALYILNYNGVEEIPCQYILSRWRKDFKRLYVPHLSADNVDISNPVQCFDHLYKRAMQVVEEGMISQDHYMVSWQAFKESLNKVRLVADKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSV1</accession>
    <name>V7BSV1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Leucine-rich repeat-containing N-terminal plant-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_005G036600g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the polygalacturonase-inhibiting protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSV1"/>
    <dbReference type="SMR" id="V7BSV1"/>
    <dbReference type="STRING" id="3885.V7BSV1"/>
    <dbReference type="Gramene" id="ESW21044">
        <property type="protein sequence ID" value="ESW21044"/>
        <property type="gene ID" value="PHAVU_005G036600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSYFMAL"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000383">
        <property type="entry name" value="Leucine-rich repeat receptor protein kinase EMS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000400">
        <property type="entry name" value="Nuclear pore complex protein NUP107"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053211">
        <property type="entry name" value="DNA_repair-toleration"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025875">
        <property type="entry name" value="Leu-rich_rpt_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48060">
        <property type="entry name" value="DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48060:SF7">
        <property type="entry name" value="DNA DAMAGE-REPAIR_TOLERATION PROTEIN DRT100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12799">
        <property type="entry name" value="LRR_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0611">Plant defense</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 14" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757051" description="Leucine-rich repeat-containing N-terminal plant-type domain-containing protein" evidence="14">
        <location>
            <begin position="24"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="15">
        <location>
            <begin position="26"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW21044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="39079" checksum="5E31BEDB6B885220" modified="2014-02-19" version="1">MARHSFLLLAAAIIAAAVAVATGCSPSDREALFGFRQALNEPYLGLFNSWTGSNCCVNWYGVSCDAATGRVTDVNLRGESEDPIFEKSGRSGYMTGKLSPAICGIDTLTTFVVADWKDIAGDIPACITGLSSLRILDLIGNKLSGEIPGDIGRLNRLTVLNLADNALTGKIPPSITQLTSLKHLDLSSNLLTGEIPKNFGNLAMLSRAMLNRNQLTGSIPVSISKIYRLADLDLSVNRLTGSVPFELGKMPVLSVLNLDSNSLKGLIPESLLSNGGMGILNLSRNGFEGSIPDVFGSHSYFMALDLSYNNLKGRVPESLASAKYIGHLDLSHNHLCGSIPVGEPFDHLEASSFGFNDCLCGNPLKTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUX8</accession>
    <name>V7BUX8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G203800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the pseudouridine synthase TruB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUX8"/>
    <dbReference type="SMR" id="V7BUX8"/>
    <dbReference type="STRING" id="3885.V7BUX8"/>
    <dbReference type="Gramene" id="ESW20376">
        <property type="protein sequence ID" value="ESW20376"/>
        <property type="gene ID" value="PHAVU_006G203800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2529">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWISCEV"/>
    <dbReference type="OrthoDB" id="10250002at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031429">
        <property type="term" value="C:box H/ACA snoRNP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000495">
        <property type="term" value="P:box H/ACA sno(s)RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990481">
        <property type="term" value="P:mRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031118">
        <property type="term" value="P:rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031120">
        <property type="term" value="P:snRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02572">
        <property type="entry name" value="PseudoU_synth_hDyskerin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd21148">
        <property type="entry name" value="PUA_Cbf5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2350.10:FF:000001">
        <property type="entry name" value="H/ACA ribonucleoprotein complex subunit CBF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.10">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="entry name" value="PUA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012960">
        <property type="entry name" value="Dyskerin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002501">
        <property type="entry name" value="PsdUridine_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004802">
        <property type="entry name" value="tRNA_PsdUridine_synth_B_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032819">
        <property type="entry name" value="TruB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004521">
        <property type="entry name" value="Uncharacterised_CHP00451"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00425">
        <property type="entry name" value="CBF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003280">
        <property type="entry name" value="PRK04270.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00451">
        <property type="entry name" value="unchar_dom_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23127">
        <property type="entry name" value="CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23127:SF0">
        <property type="entry name" value="H_ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08068">
        <property type="entry name" value="DKCLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16198">
        <property type="entry name" value="TruB_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01509">
        <property type="entry name" value="TruB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01136">
        <property type="entry name" value="DKCLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50890">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dyskerin-like" evidence="5">
        <location>
            <begin position="41"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="PUA" evidence="4">
        <location>
            <begin position="290"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="419"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="458"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="491"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="513"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="534"/>
            <end position="556"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW20376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="571" mass="63941" checksum="9B5B5D63282CE741" modified="2014-02-19" version="1">MSQSESKKKKERGSGKVVEEEQAGKDEGLMIKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPIPSGYSPLKRPLAEYLKYGVINLDKPANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVFDNFRDESYLRRAVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLISQGMLDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGMAAAPEPEDEKDGDGEGRKRKKHESTDSPVSVPAKKAKVDVEEVDVKKVADETVEVEVDKKEKKKKKKKDKDNSEVASSDEEKTEKKKKHKDKVEDGSPELEKSEKKKKKKKDKEAAAAEISNGKEDESNADKSEKKKHKKKKNKDAEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BW37</accession>
    <name>V7BW37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G014700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BW37"/>
    <dbReference type="SMR" id="V7BW37"/>
    <dbReference type="Gramene" id="ESW20786">
        <property type="protein sequence ID" value="ESW20786"/>
        <property type="gene ID" value="PHAVU_005G014700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RLNEAWD"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001326">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000073">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000395">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000031">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002415">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF373">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY, DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="104"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="174"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="205"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="306"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="407"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="477"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="7">
        <location>
            <begin position="508"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="8">
        <location>
            <begin position="723"/>
            <end position="814"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="814" mass="91577" checksum="44D66423A873295A" modified="2014-02-19" version="1">MCTQFITLRPAPIPNITNQNTKKRPTSVPLYQRIFIPSHVYRHPSAVLLELCTSLKELHQILPLVIKNGFYDEHFFQTKLISLFCKFSSITEAARVFEPVEQKLDVLYHTMLKGYAKNSALRDALKFFGRMRFDEVSPVVYDFTYLLQLCGDSLDLTRGREVHGMVITNGFQSNLFAMTAVVNLYAKCRQVEDAYKMFERMPQRDLVSWNTVVAGFAQNGLARRAVQLVLQMQEAGQKPDSITLVTVLPALADVKALRIGKSVHGYAFRAGFESKINVWTAMLDMYFKCGSVKNARLVFKGMSSRNVVSWNTMINGFEQNGESEEAFAMFLKMLDEGVEPTNVSMMGALHACANLGDLERGRFVHRLLEEKKLGSDVSVMNSLISMYSKCKRVDIAASLFGNLKQKTIVTWNAMILGYAQNGCINEALNLFCEMQSHDIKPDSFTLVSVVTALADLSVTRQAKWIHGLTIRTLMDKNVFVCTALVDTYAKCGAIQTARNLFDMMEERHVITWNAMIDAYGTHGHGKEALDLFDDMQKGSVKPNEITFLSVIAACSHSGLVEEGLYYFESMKENYGLRPSMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGISVLGAMLGACKIHKNVELGEKVADELFELDPDEGGYHVLLANMYASASMWEKVARVRTAMEKKGIKKTPGCSLVELRNEVHTFYSGSTDHPQSKRIYAYLDTLGDEIKAAGYVPDTNSIHDVEEDVKEQLVSSHSERLAIAFGLLNTSRGTTIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGSCSCRDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY12</accession>
    <name>V7BY12_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G182800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY12"/>
    <dbReference type="STRING" id="3885.V7BY12"/>
    <dbReference type="Gramene" id="ESW22809">
        <property type="protein sequence ID" value="ESW22809"/>
        <property type="gene ID" value="PHAVU_005G182800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7CV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFMAKIT"/>
    <dbReference type="OrthoDB" id="2012160at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027854">
        <property type="entry name" value="STMP1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33528">
        <property type="entry name" value="OS07G0239500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33528:SF17">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15054">
        <property type="entry name" value="DUF4535"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757201" evidence="1">
        <location>
            <begin position="18"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="58" mass="6537" checksum="7168845AA805007B" modified="2014-02-19" version="1">MGIFRSCFSFIAGTVCGVYIAQNYQVPNVTKLADTALFMAKVVEEKYRKPNKRDDDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZG3</accession>
    <name>V7BZG3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G154500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GRAS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZG3"/>
    <dbReference type="SMR" id="V7BZG3"/>
    <dbReference type="STRING" id="3885.V7BZG3"/>
    <dbReference type="Gramene" id="ESW22445">
        <property type="protein sequence ID" value="ESW22445"/>
        <property type="gene ID" value="PHAVU_005G154500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQN4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCYKTLT"/>
    <dbReference type="OrthoDB" id="1913536at2759"/>
    <dbReference type="PhylomeDB" id="V7BZG3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005202">
        <property type="entry name" value="TF_GRAS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31636">
        <property type="entry name" value="OSJNBA0084A10.13 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03514">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50985">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="VHIID" evidence="5">
        <location>
            <begin position="149"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="SAW" evidence="5">
        <location>
            <begin position="356"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="VHIID" evidence="5">
        <location>
            <begin position="180"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="36"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="46"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="441" mass="49996" checksum="BC0AFAEBCB22CED1" modified="2014-02-19" version="1">MHLTPYTTTTTPKKPSPQSNHHHHNNNILHEPPPLDNNNNTTMHRSNQSHTSTSRSSDSTEPNDDGKWAPKLLRECAKAISDRDSTKTHHLLWMLNELASPYGDCDQKLASYFLQALFCRATDSGQRCYKTLSSVAEKSHSFDSARRLILKFQEVSPWTTFGHVASNGAILEALEGEPKLHIIDLSNTLCTQWPTLLEALATRNDETPHLKLTVVALAGSVMKEVGQRMEKFARLMGVPFEFNVISGFRDLTKEGLGVQEDEAIAVNCVGALRRVEVEERENLIRVFKSLGPKVVTVVEEEADFCSWREDLVKCLEECLRFYSLYFEMLEESFPATSNERLMLERECSRSIVRVLACCDDLEDDGGECCERRERGTQWCERLRNAFSPVGFSDDVVDDVKALLKRYQPGWSLVVSQGDDHLSGIYLTWKEEPVVWASAWKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZK6</accession>
    <name>V7BZK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rx N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G0368001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZK6"/>
    <dbReference type="Gramene" id="ESW23319">
        <property type="protein sequence ID" value="ESW23319"/>
        <property type="gene ID" value="PHAVU_004G0368001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SWPQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFTHPHV"/>
    <dbReference type="OrthoDB" id="1743675at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="68" mass="7574" checksum="13E451A12370375B" modified="2014-02-19" version="1" fragment="single">MAAELVGGALLSAFLQVAFDRLASPQLLDFFRGRKLDEKLLDNLNIMLHSINALADELKQFTHPHVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0A9</accession>
    <name>V7C0A9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PGR5-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G144700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0A9"/>
    <dbReference type="STRING" id="3885.V7C0A9"/>
    <dbReference type="Gramene" id="ESW22326">
        <property type="protein sequence ID" value="ESW22326"/>
        <property type="gene ID" value="PHAVU_005G144700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRUP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWHGSKL"/>
    <dbReference type="OrthoDB" id="567232at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016730">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009773">
        <property type="term" value="P:photosynthetic electron transport in photosystem I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039987">
        <property type="entry name" value="PGRL1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31032:SF2">
        <property type="entry name" value="PGR5-LIKE A PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31032">
        <property type="entry name" value="PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="279" mass="30862" checksum="7E2D64C4980DD661" modified="2014-02-19" version="1">MGGACSSNAFSAVQSTISSRFRSHRTVSLFSVRACVDPPRAPSCIYVGPLHTATKETLEALYSQARDAYYSGDPLILDDMFDRIELKLKWYGSKSVVKYPRCSIRRHSTYADSDEDLSMAFALASLWSLFLALGCSACVWPILYTVTTAYQKAFDSGGLSYVSQASGVGFLFVVNSVILTALGLVIGYPVASASVKVLQGLWRVDLAALKGSCPNCGEEVFAFVRTDKGNNSPHRADCHVCECLLEFRTKAEQSDLRSGRQWVYGRIYLVRRSRRQREP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C143</accession>
    <name>V7C143_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_005G167700g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C143"/>
    <dbReference type="SMR" id="V7C143"/>
    <dbReference type="Gramene" id="ESW22616">
        <property type="protein sequence ID" value="ESW22616"/>
        <property type="gene ID" value="PHAVU_005G167700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4701">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNDQTDI"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02877">
        <property type="entry name" value="GH18_hevamine_XipI_class_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045321">
        <property type="entry name" value="Cts1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021820">
        <property type="entry name" value="S-locus_recpt_kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF926">
        <property type="entry name" value="OS07G0535800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11883">
        <property type="entry name" value="DUF3403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4 13" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754895" description="non-specific serine/threonine protein kinase" evidence="13">
        <location>
            <begin position="21"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="385"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="domain" description="GH18" evidence="15">
        <location>
            <begin position="21"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="462"/>
            <end position="748"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW22616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="780" mass="86962" checksum="D4149062942F6ECA" modified="2014-02-19" version="1">MRRSVFPSLLLLLLLHPSEGEDIAIYWGQNPREGNLTETCATGKYSYVNIASLSTFGNGQTPKLAIAANHCDVASSNVCTEIGREIRNCQKQGIKVMLSIGGNSDKYSITSIEDAKNVSDYLWNNFLGGSSSSRPFGDAVLDGIDFDIRAATPQCPFPDATLDSALATGLFDYVWIQFYNNPSCEYTQNNFDNFLKVWNRWSSSLNAGKIFLGLPADQAAVPSGYVSADVLVSKILPAVNESPNYGGVMLWSRYEDKMSGYSSYIQNFHTNQTLRSVCTPQSVPSCRSSEGDFVEGVGNMSTVGTEVYAGSNGTQCCEIICRNNCSCQAYAPINHKNNTGCQIWLKGTEFVRASVDIALPIYVSVALLPDDKSTTRFPTTKVNRWYIWLIIGVAAAFAIPVIFYLWRVLWRNYKAKVERKKMQKKLLHDIGGNSRKSKNKGKTSNGVEIFTFETIVAATENFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSEQGVMEFKNEAKLMAKLQHTHLVKLLGFCIQRDERILVYEYMPNKSLDFYLFDSARKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGLARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILIGKKNNSLYDSDRTLNLIGYVWQLWNEGRTLELIDPDSHELCPQNAVLRCVHIGLLCVQDQATDRPTMADIVSFLSNDTVELPQPKQPAFFINVVVEDSELSYSRQELHSSNDLTLSSTHGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1R6</accession>
    <name>V7C1R6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cullin family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G027900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the cullin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1R6"/>
    <dbReference type="SMR" id="V7C1R6"/>
    <dbReference type="STRING" id="3885.V7C1R6"/>
    <dbReference type="Gramene" id="ESW23215">
        <property type="protein sequence ID" value="ESW23215"/>
        <property type="gene ID" value="PHAVU_004G027900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2166">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFKDMTI"/>
    <dbReference type="OrthoDB" id="27073at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031625">
        <property type="term" value="F:ubiquitin protein ligase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000183">
        <property type="entry name" value="Cullin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1310.10:FF:000001">
        <property type="entry name" value="Cullin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1310.10:FF:000005">
        <property type="entry name" value="Cullin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1310.10:FF:000006">
        <property type="entry name" value="Cullin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1310.10:FF:000002">
        <property type="entry name" value="cullin-3 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.230.130:FF:000007">
        <property type="entry name" value="Cullin-3A like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1310.10">
        <property type="entry name" value="Cullin Repeats"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.130">
        <property type="entry name" value="Cullin, Chain C, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045093">
        <property type="entry name" value="Cullin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059120">
        <property type="entry name" value="Cullin-like_AB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016158">
        <property type="entry name" value="Cullin_homology"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036317">
        <property type="entry name" value="Cullin_homology_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001373">
        <property type="entry name" value="Cullin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019559">
        <property type="entry name" value="Cullin_neddylation_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11932">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00888">
        <property type="entry name" value="Cullin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26557">
        <property type="entry name" value="Cullin_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10557">
        <property type="entry name" value="Cullin_Nedd8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00182">
        <property type="entry name" value="CULLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00884">
        <property type="entry name" value="Cullin_Nedd8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75632">
        <property type="entry name" value="Cullin homology domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50069">
        <property type="entry name" value="CULLIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0832">Ubl conjugation</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Cullin family profile" evidence="7">
        <location>
            <begin position="374"/>
            <end position="602"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="733" mass="85450" checksum="E0126759ECF48ADB" modified="2014-02-19" version="1">MSTQKKRAFQIEAFKHRVVVDPKYAEKTWKVLEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYTGLVTTMTSHLKEISQSIESAQGEIFLDELNRKWADHNKALQMIRDILMYMDRTFVPSNHKTSVHELGLNLWRDVVIHSIKTQARLLDTLLELVLRERNGEVINRGLMRNIIKMLMDLGLPVYQLDFEKHFLDVSSNFYGCESQKFIETCDCGDYLKKAERRLNEELERVSHYLDPRSESKITNVVEKEMIESHMHTLVHMENSGLVSMLVDDKYEDLQRMYNLFRRVPAGLTIVKEVMTSFIRDTGKQLIMDPERLRDPVDFVQRLLDLKDKYDKVITMSFNNDKTFQNALNSSFEYFINLNARSPEFISLFVDDKLRRGLKGVGEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTISDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSHDTMQGFYTGQGTELGDGPTLSVQVLTTGSWPTQPSPPCNLPSEILGVCDRFRTYYLGTHNGRRLSWQTNMGTADLKATFGKGQKHELNVSTYQMCVLMLFNNVEQLTCKEIEQATAIPMSDLRRCLQSLACVKGKNVLRKEPMSKDIAEDDTFFFNDKFTSKFFKVKIGTVVAQRESEPENLETRQRVEEDRKPQIEAAIVRIMKSRRTRDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C222</accession>
    <name>V7C222_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HECT-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G009400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.26"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C222"/>
    <dbReference type="STRING" id="3885.V7C222"/>
    <dbReference type="Gramene" id="ESW22961">
        <property type="protein sequence ID" value="ESW22961"/>
        <property type="gene ID" value="PHAVU_004G009400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0942">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1805006at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000209">
        <property type="term" value="P:protein polyubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044611">
        <property type="entry name" value="E3A/B/C-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45700:SF6">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE UPL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45700">
        <property type="entry name" value="UBIQUITIN-PROTEIN LIGASE E3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="11797" checksum="987B91FAFD6C0036" modified="2014-02-19" version="1">MNKKLSYLSGDAPGWLLSLSVFCPAYKHMLMIVDNEEYYEQEIPLSLKDIRSLIILLRQALWQLLWVNHITSANLVKFVLVSTAIKKQFEAILWQFEAIQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2E2</accession>
    <name>V7C2E2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FBD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G016100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2E2"/>
    <dbReference type="Gramene" id="ESW23071">
        <property type="protein sequence ID" value="ESW23071"/>
        <property type="gene ID" value="PHAVU_004G016100g"/>
    </dbReference>
    <dbReference type="OMA" id="HANEGAD"/>
    <dbReference type="OrthoDB" id="868202at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006566">
        <property type="entry name" value="FBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050232">
        <property type="entry name" value="FBL13/AtMIF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900:SF34">
        <property type="entry name" value="EMB|CAB62440.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900">
        <property type="entry name" value="F-BOX/RNI SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08387">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00579">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FBD" evidence="1">
        <location>
            <begin position="195"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="31903" checksum="B2A3A57FC491608D" modified="2014-02-19" version="1">MADIISCFSCFPDSILCYILSFLPTEQVVVTGVLGYDRNDSDTILQILKLVYIRVENTSFVDLPLLKILHLNYVYFEQDDLPQFLSGCLNLEHLKVKIMDYRTLEEFQTLPKLVRAEIDTCVVPLEIVKNVQVLVTSRIDLKDLVFDLHNLVQLELTFVYCKELVEVLEVLKHCPKLQTLVISTYDDKLFKYEFSCISLHLKTCCVKDYKGCAFEFQFAEYIMLNANYLRTMKFLVSSYEYDDLLRRHDMIRDLSSCSKSSNTCTLSFEKSVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3X8</accession>
    <name>V7C3X8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">Chlorophyll a-b binding protein, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_004G093000g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 18">Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3X8"/>
    <dbReference type="STRING" id="3885.V7C3X8"/>
    <dbReference type="Gramene" id="ESW23990">
        <property type="protein sequence ID" value="ESW23990"/>
        <property type="gene ID" value="PHAVU_004G093000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPU1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1494514at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009522">
        <property type="term" value="C:photosystem I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009523">
        <property type="term" value="C:photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016168">
        <property type="term" value="F:chlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009765">
        <property type="term" value="P:photosynthesis, light harvesting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3460.10:FF:000001">
        <property type="entry name" value="Chlorophyll a-b binding protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3460.10">
        <property type="entry name" value="Chlorophyll a/b binding protein domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001344">
        <property type="entry name" value="Chloro_AB-bd_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022796">
        <property type="entry name" value="Chloroa_b-bind"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21649">
        <property type="entry name" value="CHLOROPHYLL A/B BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00504">
        <property type="entry name" value="Chloroa_b-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103511">
        <property type="entry name" value="Chlorophyll a-b binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 17 18" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="4 18" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="13 18" id="KW-0157">Chromophore</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5 18" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="10 18" id="KW-0603">Photosystem I</keyword>
    <keyword evidence="16 18" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="7 18" id="KW-0934">Plastid</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14 18" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>3</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>chlorophyll a</name>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>chlorophyll b</name>
            <dbReference type="ChEBI" id="CHEBI:61721"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Mg</name>
            <dbReference type="ChEBI" id="CHEBI:25107"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR601344-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU363080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW23990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="264" mass="27939" checksum="66876E5F30C1F27C" modified="2014-02-19" version="1">MAASTMALSSPSLAGQAIKLSPATPDLSGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGQFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5Z1</accession>
    <name>V7C5Z1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G046300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">Can form complexes with MYC2, MYC3 or MYC4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5Z1"/>
    <dbReference type="SMR" id="V7C5Z1"/>
    <dbReference type="STRING" id="3885.V7C5Z1"/>
    <dbReference type="Gramene" id="ESW25559">
        <property type="protein sequence ID" value="ESW25559"/>
        <property type="gene ID" value="PHAVU_003G046300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKCESIQ"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080090">
        <property type="term" value="P:regulation of primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000394">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994:SF5">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="9"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="66"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00062314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="33009" checksum="F6B6FDA9A764C090" modified="2014-02-19" version="1">MGRKACCENLGLKKGPWTPEEDKKLLDYVGKHGHRNWRLVPAKAGLERCGKSCRLRWINYLKPDIKRGNFSTEEDHTIIKLHALLGNKWSIIAAHLPQRTDNEIKNYWKTNIKKRLIGMGLDPITHKTIKQNTFECCGDGQDQSKDTINIRHVAQWERARLEAEARGSMLQVGSGSSNLSGLILSKIPTQPCLSSHSVSTEHKRVHNMYALVLTTNHDFRSSVSTLSIPKLPAVSNIPQITNTESLLTYKADNNVMEGCVSNLQDDDIMVAVEAFRTARSEGIEELFNEFTSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7A7</accession>
    <name>V7C7A7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Smr domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G086100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7A7"/>
    <dbReference type="SMR" id="V7C7A7"/>
    <dbReference type="Gramene" id="ESW26034">
        <property type="protein sequence ID" value="ESW26034"/>
        <property type="gene ID" value="PHAVU_003G086100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RPWQAKK"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042134">
        <property type="term" value="F:rRNA primary transcript binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009658">
        <property type="term" value="P:chloroplast organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045727">
        <property type="term" value="P:positive regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000485">
        <property type="entry name" value="pentatricopeptide repeat-containing protein At4g16390, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000509">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g16390, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000423">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033443">
        <property type="entry name" value="PROP1-like_PPR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002625">
        <property type="entry name" value="Smr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF12">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ATP4 HOMOLOG, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17177">
        <property type="entry name" value="PPR_long"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00463">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50828">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="180"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="215"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="250"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="285"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="320"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="355"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="390"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="426"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="461"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="domain" description="Smr" evidence="5">
        <location>
            <begin position="609"/>
            <end position="693"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="17"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="82"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="704" mass="78605" checksum="A3C7B888CFE5911F" modified="2014-02-19" version="1">MAYNLCSSPSSLFHDLPSISSSPSSSSSSSSSRKFKLRNLSSSSFQPSPSHSLTLPSKTLLHAPQVSLHEPIPEQVPSEGNSSSSSSSYKSSRIWVNPRSPRAKQLERHSYDARYTSLVNVANSLDSCNPSPEDVSLVLKSLGDRVLEQDAVTVINNMSNSLVVPFVLSYFQSRIKPTREAILYNVTLKVFRKGRDLDAMEKIFDEMLQRGVRPDNVTFSTIISCARICLLPHKAVEWFEKMSSFGCEPDEVTYSVMIDAYGRAGNIDMALRLYDRARTESWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIFMEMMNNGLSPNWVTYASLLRAYGRGRYSEDALFVYKEMREKGMEMNTHLYNTLLAMCADLGLADDAFKIFEDMKSSATCLCDSWTFSSLITIYSCSGNVSDAERMLNEMIESGFEPTIFVLTSLVQCYGKAGRTDDVVKTFDQLLDLGISPDDRFCGCLLNVMTQTPKEELFKLNYCVDKANPKLGSVVRYLVEGLEEGDGEFRKEASELFDSIADEVKKPFCNSLIDLCVNLNLLDMACQLLDIGLSREIYTDIQTKSQTQWSLHLKSLSLGASLTALHAWINDLSKVLESGEDLPPVLGINTGHGKHRYSEKGLASVVESHLNELNAPFHEAPDKAGWFLTTEVAAKSWLESREMVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8W0</accession>
    <name>V7C8W0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Reverse transcriptase zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G057100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8W0"/>
    <dbReference type="Gramene" id="ESW25690">
        <property type="protein sequence ID" value="ESW25690"/>
        <property type="gene ID" value="PHAVU_003G057100g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1432962at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="80" mass="9675" checksum="EFD9DF2D10AC6B3D" modified="2014-02-19" version="1">MIVWVAFIWNIWTYRNNIIFRNLKPNGVKVFTLVQIKSWAWITRKYTKAMFSYFDWCLNPITCLKYVLRSVFIVEGVDFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9G5</accession>
    <name>V7C9G5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G150700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9G5"/>
    <dbReference type="SMR" id="V7C9G5"/>
    <dbReference type="STRING" id="3885.V7C9G5"/>
    <dbReference type="Gramene" id="ESW26817">
        <property type="protein sequence ID" value="ESW26817"/>
        <property type="gene ID" value="PHAVU_003G150700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VGCGHLF"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ATL42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539:SF9">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="30"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="103"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW26817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="181" mass="20265" checksum="7FDD3F20DEFD5A22" modified="2014-02-19" version="1">MPLATHHPQFQPQPQPKPNPNLLSLFLKPIIMLLLTSLFFLFIGFAAFLLLNLFLLGGAFHRLRFRPSAVTATASNALLPREINKLPRFRLSRGSHILADFPCVVCLDTFRNGQWCRKLAACGHVFHRRCVDTWLLKVAACPTCRTPVRLNAETPVRDPTLGSAFAQFQTCETDSNALALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9Y3</accession>
    <name>V7C9Y3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">40S ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G094500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9Y3"/>
    <dbReference type="SMR" id="V7C9Y3"/>
    <dbReference type="STRING" id="3885.V7C9Y3"/>
    <dbReference type="Gramene" id="ESW26142">
        <property type="protein sequence ID" value="ESW26142"/>
        <property type="gene ID" value="PHAVU_003G094500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW26143">
        <property type="protein sequence ID" value="ESW26143"/>
        <property type="gene ID" value="PHAVU_003G094500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3320">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGQNKIH"/>
    <dbReference type="OrthoDB" id="1724687at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030686">
        <property type="term" value="C:90S preribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000554">
        <property type="entry name" value="Ribosomal_eS7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047861">
        <property type="entry name" value="Ribosomal_eS7_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11278">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11278:SF29">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN ES7Z"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01251">
        <property type="entry name" value="Ribosomal_S7e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00948">
        <property type="entry name" value="RIBOSOMAL_S7E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW26143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="191" mass="22126" checksum="78BFAD41A47E74A6" modified="2014-02-19" version="1">MYTSRKKIHKDKDAEPTEFEESVGQAFFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPTTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEB5</accession>
    <name>V7CEB5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Homeobox domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G223200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HD-ZIP homeobox family. Class II subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEB5"/>
    <dbReference type="SMR" id="V7CEB5"/>
    <dbReference type="Gramene" id="ESW27688">
        <property type="protein sequence ID" value="ESW27688"/>
        <property type="gene ID" value="PHAVU_003G223200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0483">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLYMHMK"/>
    <dbReference type="OrthoDB" id="6159439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000577">
        <property type="entry name" value="Homeobox-leucine zipper protein 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050762">
        <property type="entry name" value="HD-ZIP_Homeobox_LZ_Class_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006712">
        <property type="entry name" value="HD-ZIP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000047">
        <property type="entry name" value="HTH_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003106">
        <property type="entry name" value="Leu_zip_homeo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45714:SF83">
        <property type="entry name" value="HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45714">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02183">
        <property type="entry name" value="HALZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04618">
        <property type="entry name" value="HD-ZIP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00031">
        <property type="entry name" value="HTHREPRESSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00340">
        <property type="entry name" value="HALZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 8 9" id="KW-0371">Homeobox</keyword>
    <keyword evidence="7 8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="12">
        <location>
            <begin position="130"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="8">
        <location>
            <begin position="132"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="27"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="82"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="189"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="90"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="103"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW27688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="295" mass="33027" checksum="354CB10BB8436452" modified="2014-02-19" version="1">MMVQKEDLGLSLSLNFRHNIPNPQHLTLISSSTHSSSPSASNPFKPSWNDPFASSDRNSDTCRGETRSFLRGIDVNRLPSAVDMEEEAGVSSPNSTVSSVSGKRSEREPNGEEHDMNRACSRGISDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLLPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSSAVDAATRHHPMAQAQTHGRPIPIGPWASAGPIPQRAFDGFHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEI9</accession>
    <name>V7CEI9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Tubulin alpha chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_003G231500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11 13">Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="12">
            <dbReference type="Rhea" id="RHEA:19670"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="13">Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
            <location evidence="2">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the tubulin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEI9"/>
    <dbReference type="SMR" id="V7CEI9"/>
    <dbReference type="STRING" id="3885.V7CEI9"/>
    <dbReference type="Gramene" id="ESW27778">
        <property type="protein sequence ID" value="ESW27778"/>
        <property type="gene ID" value="PHAVU_003G231500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1376">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RECLCIH"/>
    <dbReference type="OrthoDB" id="6049624at2759"/>
    <dbReference type="PhylomeDB" id="V7CEI9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005200">
        <property type="term" value="F:structural constituent of cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007017">
        <property type="term" value="P:microtubule-based process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02186">
        <property type="entry name" value="alpha_tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.600:FF:000005">
        <property type="entry name" value="Tubulin alpha chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.20:FF:000001">
        <property type="entry name" value="Tubulin alpha chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1440:FF:000004">
        <property type="entry name" value="Tubulin alpha chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.600">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="entry name" value="Tubulin/FtsZ, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="entry name" value="Tubulin/FtsZ, GTPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002452">
        <property type="entry name" value="Alpha_tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000217">
        <property type="entry name" value="Tubulin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023123">
        <property type="entry name" value="Tubulin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017975">
        <property type="entry name" value="Tubulin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11588">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03953">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01162">
        <property type="entry name" value="ALPHATUBULIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01161">
        <property type="entry name" value="TUBULIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00865">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="Tubulin C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="Tubulin nucleotide-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00227">
        <property type="entry name" value="TUBULIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="9 13" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 13" id="KW-0493">Microtubule</keyword>
    <keyword evidence="6 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin/FtsZ GTPase" evidence="15">
        <location>
            <begin position="49"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin/FtsZ 2-layer sandwich" evidence="16">
        <location>
            <begin position="248"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="14">
        <location>
            <begin position="418"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00034296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00049117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="SMART" id="SM00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW27778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="450" mass="49564" checksum="3A7359131E5DF241" modified="2014-02-19" version="1">MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVELCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQLSVGEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEAADGEDEDGEDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF44</accession>
    <name>V7CF44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G019300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Potential calcium sensor.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF44"/>
    <dbReference type="SMR" id="V7CF44"/>
    <dbReference type="STRING" id="3885.V7CF44"/>
    <dbReference type="Gramene" id="ESW28802">
        <property type="protein sequence ID" value="ESW28802"/>
        <property type="gene ID" value="PHAVU_002G019300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRTMKVC"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="PhylomeDB" id="V7CF44"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000089">
        <property type="entry name" value="calmodulin-like protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000720">
        <property type="entry name" value="Calmodulin-like protein 30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00036">
        <property type="entry name" value="EF-hand_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00450">
        <property type="entry name" value="RECOVERIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="45"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="81"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="116"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="152"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="188" mass="21144" checksum="E45DB1CED3F64A16" modified="2014-02-19" version="1">MSNLSFLKFNYSFSWKPSSSRKHLAQKNSFISRQTSNNEGQSFQPKEEEMKWVFQKFDTNKDGKISLEEYKAAARALDRGIGEAEAVKAFRVMDSDGDGFIDFREFVEMLNGEGRIKEADIKNAFQVFDLNGDGKISAQELSQVLKRLGESCSLSACKKMVKGVDGNGDGFIDLNEFTRMMMSGKKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF94</accession>
    <name>V7CF94_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphoglycerate mutase-like protein 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G246200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphoglycerate mutase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF94"/>
    <dbReference type="SMR" id="V7CF94"/>
    <dbReference type="STRING" id="3885.V7CF94"/>
    <dbReference type="Gramene" id="ESW27945">
        <property type="protein sequence ID" value="ESW27945"/>
        <property type="gene ID" value="PHAVU_003G246200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0235">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYPNMET"/>
    <dbReference type="OrthoDB" id="354304at2759"/>
    <dbReference type="PhylomeDB" id="V7CF94"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050275">
        <property type="entry name" value="PGM_Phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48100">
        <property type="entry name" value="BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48100:SF4">
        <property type="entry name" value="HISTIDINE PHOSPHATASE FAMILY (BRANCH 1) PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="Phosphoglycerate mutase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="2">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="25"/>
            <end position="32"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR613078-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR613078-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="230" mass="25349" checksum="40FCCFB3BFB3AD65" modified="2014-02-19" version="1">MAVSSTSVSLPSYPDSDYAEIFVVRHGKTVWNSEGRVQGQVDIELNETGRKQAVAVANRLSSEPNISAIYSSDQQRAFETAQKIAVKCGGLKVVKDLDLRERHMGDLQGLIYRDLSKTNPIAYEALMSKDDRELPGGGESFTQVFERCKSALLRIGRKHKGERVVVVTHGACIETLYKWANAKGSYAGKIENASVAVFHLYGEDNWTLKMWGDVSHLNQNSASEGHTTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGD4</accession>
    <name>V7CGD4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glucose-1-phosphate adenylyltransferase/Bifunctional protein GlmU-like C-terminal hexapeptide domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G049200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGD4"/>
    <dbReference type="SMR" id="V7CGD4"/>
    <dbReference type="STRING" id="3885.V7CGD4"/>
    <dbReference type="Gramene" id="ESW29174">
        <property type="protein sequence ID" value="ESW29174"/>
        <property type="gene ID" value="PHAVU_002G049200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV70">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2355at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016410">
        <property type="term" value="F:N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03352">
        <property type="entry name" value="LbH_LpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.10">
        <property type="entry name" value="Hexapeptide repeat proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056818">
        <property type="entry name" value="GlmU/GlgC-like_hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007691">
        <property type="entry name" value="LpxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01853">
        <property type="entry name" value="lipid_A_lpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002060">
        <property type="entry name" value="PRK00892.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43378">
        <property type="entry name" value="UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43378:SF2">
        <property type="entry name" value="UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24894">
        <property type="entry name" value="Hexapep_GlmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="Trimeric LpxA-like enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="1" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glucose-1-phosphate adenylyltransferase/Bifunctional protein GlmU-like C-terminal hexapeptide" evidence="6">
        <location>
            <begin position="71"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF24894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="329" mass="35823" checksum="436B91EEB076D240" modified="2014-02-19" version="1">MTMAGRRLLAFACSSSTPFSQTQSKSKLPLYFLSSSSFLRFFCFSRSEDATFSDKFHKWNNGGGTFHESACIDSTALVEVGAVVHSESVVGPNVRIGSGTIVGPSVTVAHSTKIGYNVALSNCCIGDSCVIHNGVSIGQDGFGFYVDDEGNMIKKPQTLNVIIGNNVEIGSNTCIDRGSWRDTVIGDNSKIDNLVQIGHNVVIGTNCLLCGQVGIAGSATIGDYVTMGGRVAVRDHVSIVSKVRLAAASFVTKDIKEPGDYGGFPAVSIHQWRRQVASRCQTRWKQESCRCCRINAKFWTFLICWNCGEVGTFYSYLRAFRLIQLVEYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHJ8</accession>
    <name>V7CHJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RPW8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G021700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHJ8"/>
    <dbReference type="Gramene" id="ESW28833">
        <property type="protein sequence ID" value="ESW28833"/>
        <property type="gene ID" value="PHAVU_002G021700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSSA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DISDCIN"/>
    <dbReference type="OrthoDB" id="2016095at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008808">
        <property type="entry name" value="Powdery_mildew-R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF28">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05659">
        <property type="entry name" value="RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51153">
        <property type="entry name" value="RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="RPW8" evidence="4">
        <location>
            <begin position="1"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="833" mass="94698" checksum="C916D8810DCF4ED9" modified="2014-02-19" version="1">MADLFSGGAVGAVMGELLKGAIATINKGLAFKPTLESNIETLKSLAPQVEEMKKYNNMLDRPIDEISRLERHMRAGEELVQKCSKFRWWRGLSFPYYQNKLGRENEALQRHLAVNVAAENKRDLMEVVTGMRMILEILLKGFEHHHEYRLVGLCGAPEEPECMGMDAPLSKLRIDLLKDGVSVLVLTGLGGSGKSTLAKKICWDPQVKDKFGGNIFFVTVSKTPNLKTIVETLYEHCGCRVPKFQTDEDAVNGLGVLLRVVGQNPILLVLDDVWPCSEAVIEKFKIQISDYKILVTSRVAFPRFGTSCQLDKLDHVHAVSLFCHFAQPNDKSSYIPDENLVHEIVRGCKGSPLALKVTAGSLCKQPFEVWQNMKEHLQRHSILESNSTNLLSRLQQSLDLLENKFSINEKVCFMDLGLFPEDQRIPFAALIDMWAELYNLNEDGSNAMSIIHDLTTRNLINVIVTRKVAKDTDMYYNNHFVLVHDLLRELAIRQSIEEKFEQKERVMIELNGDNRPEWWVGLNQLGIIGRSFSYILGMLYRQKQLKVAARILSISTDETFNSDWCDMQPDEAEVLILNLHSSQYSLPEFTEKMHKLKVLIVTNYGFHRSELNNFERLGSLTNLKRIRLEKVSIPSLCILKNLRKLSLHMCNTWQAFERYSIQISDAMPNLVEMSIDYCKDLVKLPDGLCNITPLKKLSITNCHKLSVLPQDIAKLENLEVLRLCSCSDLVEMPDSVKGLNKLSCLDISDCLNLTKLPDDIGELKLEKLYLKGCSKLRELPYSVVNFGNLKHKIHVICDEEMASLWENFPTIPNLKIEISIVEVNLNWLPGVHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIP8</accession>
    <name>V7CIP8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G117100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIP8"/>
    <dbReference type="SMR" id="V7CIP8"/>
    <dbReference type="STRING" id="3885.V7CIP8"/>
    <dbReference type="Gramene" id="ESW30009">
        <property type="protein sequence ID" value="ESW30009"/>
        <property type="gene ID" value="PHAVU_002G117100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1290">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAPKQPC"/>
    <dbReference type="OrthoDB" id="2649at2759"/>
    <dbReference type="PhylomeDB" id="V7CIP8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050684">
        <property type="term" value="P:regulation of mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000245">
        <property type="term" value="P:spliceosomal complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd14136">
        <property type="entry name" value="STKc_SRPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000303">
        <property type="entry name" value="Protein kinase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000425">
        <property type="entry name" value="Serine/threonine-protein kinase SRPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051334">
        <property type="entry name" value="SRPK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47634:SF14">
        <property type="entry name" value="SERINE_THREONINE KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="38"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="442" mass="49438" checksum="870337F2B70586CD" modified="2014-02-19" version="1">MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAQFVQAALHEIDFLSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCILIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNPNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGSGDIAKNDRNINGIDVRCKIVDFGSACWADKQFAEEIQTRQYRAPEVILTSGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGGQSKDFFDRHGDLKRIRRLKFCPLDKLLTDRYKFSVKDAQEFSEFLQPLFDFAPEKRPTARKCLEHPWLNCMESPPNETAKEKVDDVGMSNLEIRVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ98</accession>
    <name>V7CJ98_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Homeobox-leucine zipper protein ROC3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G137000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HD-ZIP homeobox family. Class IV subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ98"/>
    <dbReference type="STRING" id="3885.V7CJ98"/>
    <dbReference type="Gramene" id="ESW30247">
        <property type="protein sequence ID" value="ESW30247"/>
        <property type="gene ID" value="PHAVU_002G137000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU3P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAPVMGC"/>
    <dbReference type="OrthoDB" id="6159439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08875">
        <property type="entry name" value="START_ArGLABRA2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000229">
        <property type="entry name" value="Homeobox-leucine zipper protein HDG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042160">
        <property type="entry name" value="HD-Zip_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057993">
        <property type="entry name" value="HD-Zip_IV_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002913">
        <property type="entry name" value="START_lipid-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654:SF11">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25797">
        <property type="entry name" value="PDF2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01852">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00234">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50848">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0371">Homeobox</keyword>
    <keyword evidence="8 9 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="12">
        <location>
            <begin position="81"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="START" evidence="13">
        <location>
            <begin position="275"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="9">
        <location>
            <begin position="83"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="53"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW30247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="791" mass="87881" checksum="A366CBC30532F41A" modified="2014-02-19" version="1">MYGDCQVMSSMGGNVVVNSDTLFSSSIQNSNFNFIPTMPFQPFPSMKEEDGMLRGKEEMESGSGSEQVEDKSGNEQESEQPTKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNIILRAENETLKSENYRLQAALRNVMCPNCGGQCIMGADLGLDEHQVRIENARLREELERVCCLTSRYTGRSLQTMAAGPTLMAPSLDLDMNMYPRHFSDSVAPCTEMIPVPMLPPEASPFSEGGGVLMEEEKSLALELAASSMAELVKMCQTNEPLWIRSSEGEREVLNFEEHARIFPWPQNLKHRSELRTEASRDTSVVIMNSVTLVDAFLDGQKWMELFPTIVSRAKTVQIISSGASGHASGTLQLMSAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIKTFGLNMSTSGGQSWTAISDSPEDTVRITTRKVTEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFTIVPMLSSPNVDTPINANSSEPPSLNSGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALSNGNENGTNFLCTEPTASAPPKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJS1</accession>
    <name>V7CJS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Structural polyprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G078700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJS1"/>
    <dbReference type="STRING" id="3885.V7CJS1"/>
    <dbReference type="Gramene" id="ESW29545">
        <property type="protein sequence ID" value="ESW29545"/>
        <property type="gene ID" value="PHAVU_002G078700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S01C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIPPVNE"/>
    <dbReference type="OrthoDB" id="2019675at2759"/>
    <dbReference type="PhylomeDB" id="V7CJS1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36336">
        <property type="entry name" value="OS09G0560400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36336:SF1">
        <property type="entry name" value="OS09G0560400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757843" description="Structural polyprotein" evidence="3">
        <location>
            <begin position="27"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="218" mass="24207" checksum="9D9AC65B7425B2C6" modified="2014-02-19" version="1">MNFANSQFLLPLFFFFFSISAFPALGQQTDWDREETQHGNGVGRRVLLSFKEKPSGTNITFECSPSGPCVPCLYSEKGDSKYRCSETGYRIPFKCVEIKDSTKDAKKTKSRKGRSSLEIPDGTAESQKVSHVAGQSTHSQSDRRLADDSSSSDNSSQAYITYRSCITPVNEEKLSVLNFEGVVIFLLLISGSIMYLRKRKAASMSGYVAGRGQNNSRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK37</accession>
    <name>V7CK37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mucin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G086800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK37"/>
    <dbReference type="STRING" id="3885.V7CK37"/>
    <dbReference type="Gramene" id="ESW29635">
        <property type="protein sequence ID" value="ESW29635"/>
        <property type="gene ID" value="PHAVU_002G086800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUSM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKNRAPW"/>
    <dbReference type="OrthoDB" id="547043at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052851">
        <property type="entry name" value="GCD1_mitochondrial"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35476">
        <property type="entry name" value="MUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35476:SF2">
        <property type="entry name" value="MUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="283"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="84"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="291"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="320" mass="36794" checksum="2BB102986480DF66" modified="2014-02-19" version="1">MQAFRRITTTTISTAKQFNALPSIISADALFYPSGEVLVTRRWLSSRKSRSGEDEWNEAWETAWLPEDLRPKTRAPWESDVNFPSSSSSPVAAADAVAEADEETKAFVAEMNENWNERRRGSKEKEKEKREENGALYSVENMKKDYRLKKQRMHAGLWMKEIEKLEEAKLADSDVAAGDDIQRLIDSCSDIFDPGNNDLNNAQVQTAEFKNMPDGWETISKNQEGNVWEMSQREEDILLQEFERRIAYSKFQIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKGSVSRVPTLSDPSTQPFKEERNSVGKTYLPLQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKJ7</accession>
    <name>V7CKJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NusB/RsmB/TIM44 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G101000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NusB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKJ7"/>
    <dbReference type="STRING" id="3885.V7CKJ7"/>
    <dbReference type="Gramene" id="ESW29815">
        <property type="protein sequence ID" value="ESW29815"/>
        <property type="gene ID" value="PHAVU_002G101000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS7J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VAPPNWK"/>
    <dbReference type="OrthoDB" id="1897242at2759"/>
    <dbReference type="PhylomeDB" id="V7CKJ7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="entry name" value="NusB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011605">
        <property type="entry name" value="NusB_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11078:SF3">
        <property type="entry name" value="ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11078">
        <property type="entry name" value="N UTILIZATION SUBSTANCE PROTEIN B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="NusB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NusB/RsmB/TIM44" evidence="7">
        <location>
            <begin position="207"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="287" mass="32123" checksum="32C32E3EFD6EA378" modified="2014-02-19" version="1">MEGVLLPVCPSSPSSSATLKPKISIPQRSSFPSSLPTHCSFPQNAAFSHRNSLRSPTFAIAQHEAPVLGKPDNNSVPALPKIDKTGRFCSPRAARELALSIIYAACLEGMDPVRLFEKRMNTRREAGYEFDKKKLLEYNHMSFGGPPVTVESDEEASDLLRHIEEESAIEAEVLTAPPKLVYNTLILRFTRKLLVAVRDAWDNHVLVINKIVPENWKNEPAGKILELCILHLAMSEMAVLETRHQIVINEAVDLGKRFCDGAAPRIINGCLRTFFRELEREESNNRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLS0</accession>
    <name>V7CLS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">MOB kinase activator-like 1A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G131800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
            <location evidence="3">Cytoskeleton</location>
            <location evidence="3">Phragmoplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLS0"/>
    <dbReference type="SMR" id="V7CLS0"/>
    <dbReference type="STRING" id="3885.V7CLS0"/>
    <dbReference type="Gramene" id="ESW30185">
        <property type="protein sequence ID" value="ESW30185"/>
        <property type="gene ID" value="PHAVU_002G131800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0440">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VDNEQMF"/>
    <dbReference type="OrthoDB" id="8170117at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009524">
        <property type="term" value="C:phragmoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.30:FF:000001">
        <property type="entry name" value="MOB kinase activator 1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.30">
        <property type="entry name" value="MOB kinase activator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005301">
        <property type="entry name" value="MOB_kinase_act_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036703">
        <property type="entry name" value="MOB_kinase_act_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22599">
        <property type="entry name" value="MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03637">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01388">
        <property type="entry name" value="Mob1_phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101152">
        <property type="entry name" value="Mob1/phocein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00060413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="215" mass="24721" checksum="8B35C0AC123A43E5" modified="2014-02-19" version="1">MSLFGIGRNQRTFRPKKSTPSGSKGAQLRKHIDATLGSGNLREAVKLPPGEDLNEWLAVNTVDFFNQVNLLYGTLTEFCTPENCRTMSAGPKYEYRWADGVQIKKPIEVSAPKYVEYLMDWIEAQLDDESIFPQKLGSPFPANFKEVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELAPLQELIETIIVPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMW5</accession>
    <name>V7CMW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G136100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMW5"/>
    <dbReference type="SMR" id="V7CMW5"/>
    <dbReference type="Gramene" id="ESW30236">
        <property type="protein sequence ID" value="ESW30236"/>
        <property type="gene ID" value="PHAVU_002G136100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQET">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RLFHQFE"/>
    <dbReference type="OrthoDB" id="66964at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024593">
        <property type="entry name" value="DUF3444"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056988">
        <property type="entry name" value="Zn_ribbon_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44137">
        <property type="entry name" value="BNAC03G44070D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44137:SF24">
        <property type="entry name" value="DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11926">
        <property type="entry name" value="DUF3444"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23551">
        <property type="entry name" value="Zn_ribbon_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="65"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="573" mass="64978" checksum="F84D8CF3067A4B9A" modified="2014-02-19" version="1">MAPPPTDSEPESEALRLKAMAESKFKASKNAKSALKYAKRAQRLCPHLAGVSEAVTSLTVLAAPDWYSALGAEPFANSGVIRKQYKKLALLLHPDKNPNVASEEAFKHVGEAFHFLSDRSLRREYDAELRRKIKAESETFWTACSTCRLLHQFQRKYMGHELVCPSCEKSFKAVETVQSDGDADGEGRVRSRRLKLKEINKKKENIGVKGKVDNEVGDEKEGRLRKRMRSVGEVLERSKPGKRVKNGEEMMTLAEFQNEVRRKLQGKKLKEKEKEKEEHIIEKTSNRRSMRRGLNSEGLEVGEVRPLKKSVRLAIEEKRGGLEKKKGLRFEEHRDSDEGELGNMVVVDSDFYDFDKDRVEKSFKKGQVWAVYDDDDGMPRNYALIDGTLSVNPFEVKLSWLDVQISGDGRIVSREKMGFHIPCGRFKVARKTSVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALHGEGSIDAEEGKRCYDIVVCLTSYNEVNGLSMAYLEKVDGYKTVFRRQEKGSGAIRFLGKDDLWLVSHQIPARKLICDETPELLKDCWELDPASLPSDLLTIAGIDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNW4</accession>
    <name>V7CNW4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF863 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G167700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNW4"/>
    <dbReference type="SMR" id="V7CNW4"/>
    <dbReference type="STRING" id="3885.V7CNW4"/>
    <dbReference type="Gramene" id="ESW30611">
        <property type="protein sequence ID" value="ESW30611"/>
        <property type="gene ID" value="PHAVU_002G167700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQQ0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRNGCGR"/>
    <dbReference type="OrthoDB" id="630817at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008581">
        <property type="entry name" value="DUF863_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33167">
        <property type="entry name" value="TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33167:SF4">
        <property type="entry name" value="TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05904">
        <property type="entry name" value="DUF863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="801"/>
            <end position="823"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="934"/>
            <end position="961"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="994"/>
            <end position="1024"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1053"/>
            <end position="1078"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="945"/>
            <end position="956"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="996"/>
            <end position="1007"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1078" mass="119347" checksum="1677E5B802E11F7A" modified="2014-02-19" version="1">MGTKVQSLPGYYSMRDLNEESSSCGWPLYYGDKTLANGHYHNYLPSAAADACSVHDKDVVKQTMLEHEAIFKNQVFELHRLYRIQRDLMDEVKMNDLHRNKISVETSFSTGPLASHITSEDGKKWQIPGFPFVGSSTCARPSISGVEGIHSPLSYNRVISRQAGLFPSPNGSSSKEVEILGFRPSKVRRKMFDLHLPADEYIDTEENEQPGDEKISGATKYLSDRNYKPEKGGDMNLFYGNGGQEDNTLRPERSLRSVNGLADLNEPVQQEETNDIAYVSPKNRNPCQGATEYSDLSAKQKSRFFGLSKENLPNSHHGTDSWAQNNGYLDNDRNGKMWISSIESGQAKSNLKPIPQVLKQEQSLLSSQTMQDEHSKVQEPTIDCLPNRSMTDLLREKKASGSDIIERNRECSANKLSESVASSHRHGLFAISPSSDLARSWSQSSWDMATSLNQKLISVQTPPSPCLNASVALSRSSQSHQSNGMLGDSWPPLNINSKLNTRFQHEAYGKNGFYTRTSSGTKELSVNISSISYLNQDSDCKKFPEHFNNGSANCCKSSTCNDMKSAKNINLNEMLSNGSSNNLLSQSGLGFMDGEQEQEEQLAVLPWLRAKTASKNEAQNAGRSLNAGGLSVFQVANLSNKDEFGKGSNGKFMHNVTPGLCPNDIEPKRTVVNEGSSSKRKILGVPIFGIPHISSKESSSFTFPSVLVPISSDVELVENNQRKHILDINLPCDASVPEFDEQAVTEVIVCETRSSTTKANSRNQIDLNLSMDEEDEAFLTNIPATSLETKVEIDLEAPAIPETEDNAIPEENKLETPSVSPQGTVEKLQDELMRYAAEAIVVLSSSCSQQVDDVISSPSESPVVDPLSWFVDIVSSCVDDLQKKIDNRRGKDGEDNEECSSDGMDYFESMTLKLTETKEEEYMPEPLVPENFKVEETGTTSLPTRTRKGPARRGRQRRDFQRDILPGLASLSRHEVTEDLQTFGGLMRATGHAWHSGLNRRSSSRNGCGRGRRRSQPQVSPSPPPLVAAIETSTPLIEQLNNIEVGLEDRSLTGWGKTTRRPRRQRFPAGNPPSIRLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP85</accession>
    <name>V7CP85_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G177000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP85"/>
    <dbReference type="STRING" id="3885.V7CP85"/>
    <dbReference type="Gramene" id="ESW30721">
        <property type="protein sequence ID" value="ESW30721"/>
        <property type="gene ID" value="PHAVU_002G177000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QYCI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SRFITEC"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31623">
        <property type="entry name" value="F21J9.9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31623:SF122">
        <property type="entry name" value="HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW30721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="449" mass="50943" checksum="E55E598D66B64747" modified="2014-02-19" version="1">MNKRVRSESNEKMELVSRETIKPSIATPPHLKIYPLCFIDNIVFRNYIPILLFYSANHHSKNHHESKISTLKKSLSQVLSRYYPFAGMLRDQLSIECNDQGVSFLVTSFACNLSSILHNPNHASFHRLFPDQLQWKPMEPTSTIVAIQINCFACGGIVISVCMCHKVADAATLCNFINDWAMFSRQNQDQQEEQEKLLSSLPFPVPGASFLPQENLPVFPETAFVKNDTVCRRFVFEGAKIDSLKAMVSSRDVHNPTRVEVVSALIYNRAVSSLGLTFKTMPFRTAVNLRNRTVPPLPEKSLGNLVWFLFVSNLGEETELQELVVKMKQGLREFRDTFGKKFGGKNKDSRFITECLEQATRVPEGGGCVESLVCCASWCRFPMYEADFGWGKPVWFSTSECPVKNSVVLMDTRDGEGIEALVNMEEHDMAKFERDFHLLQYASLNPLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQV3</accession>
    <name>V7CQV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peroxisome biogenesis protein 3-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G327400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQV3"/>
    <dbReference type="SMR" id="V7CQV3"/>
    <dbReference type="STRING" id="3885.V7CQV3"/>
    <dbReference type="Gramene" id="ESW32499">
        <property type="protein sequence ID" value="ESW32499"/>
        <property type="gene ID" value="PHAVU_002G327400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4444">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTRTVCA"/>
    <dbReference type="OrthoDB" id="45930at2759"/>
    <dbReference type="PhylomeDB" id="V7CQV3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005778">
        <property type="term" value="C:peroxisomal membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030674">
        <property type="term" value="F:protein-macromolecule adaptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045046">
        <property type="term" value="P:protein import into peroxisome membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006966">
        <property type="entry name" value="Peroxin-3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28080">
        <property type="entry name" value="PEROXISOMAL BIOGENESIS FACTOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28080:SF1">
        <property type="entry name" value="PEROXISOMAL BIOGENESIS FACTOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04882">
        <property type="entry name" value="Peroxin-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW32499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="369" mass="42037" checksum="2D6AA04B08E3E72D" modified="2014-02-19" version="1">MLSVRDFWRRHRRKVFFSVGVFGSGYLLYKLYGAHRHGIQELERELAAQRETEELMKAQMQAHFENIQRISDVTLPHAMHDLSCRITEELDLSHLLERLIQGKGQPNSLTQSEKLDLWSRLKILSFTRMALSVWATTMLSLYTKVQVNILGRHLYIDTARSLGISDSLESVDVVDREDHKKFLDSVDFLSQHGMPALISDMEAATKEVLKGKQLSTFFSSTTLHETFMQILNNFMSMGSPNYWIKYMIPEHVKPYSSNSSSDDRMLSDVTEYEQLMMEAQAVLSSAEFGSIVEVSLQAVVDKLVELMGVKFSGGSITAGLPLARVLPQVAQMCPLLLEEPSKNQFIQIIKNIQEVELFFTLLYANMPSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRS8</accession>
    <name>V7CRS8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G289900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPR family. PCMP-E subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRS8"/>
    <dbReference type="SMR" id="V7CRS8"/>
    <dbReference type="Gramene" id="ESW32063">
        <property type="protein sequence ID" value="ESW32063"/>
        <property type="gene ID" value="PHAVU_002G289900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MISASYE"/>
    <dbReference type="OrthoDB" id="1436350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000073">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000205">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015">
        <property type="entry name" value="OS07G0578800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015:SF548">
        <property type="entry name" value="OS08G0340900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="39"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="109"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="140"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00061659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="251" mass="28479" checksum="BD0C2E774DB9F3D2" modified="2014-02-19" version="1">MKTGLMMDIVVGSSLVGMYAKCNALEKAMWLFNDMPQKDVACWNTVISCYYQSGNFEEALQYFSLMRKFEFETDSVTITTAIFSCARLLDLNRGMEIHKELINSGSLLDSFVTSALVEMYGRCDHLEKALEVFEQMPKKTIVAWNSLISGYGLRGDSISCIQLLKRMNSERVKPTLTTLSSSLMVCSRSARLLEGKFVHGYIIRNRIQPDVFINNSLMDLYFKCGRVGLAENIFKLIPKSKVVYWNVMISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRW6</accession>
    <name>V7CRW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GCF C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G030200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GCF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRW6"/>
    <dbReference type="STRING" id="3885.V7CRW6"/>
    <dbReference type="Gramene" id="ESW32937">
        <property type="protein sequence ID" value="ESW32937"/>
        <property type="gene ID" value="PHAVU_001G030200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2136">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKNICLW"/>
    <dbReference type="OrthoDB" id="429427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071008">
        <property type="term" value="C:U2-type post-mRNA release spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000390">
        <property type="term" value="P:spliceosomal complex disassembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012890">
        <property type="entry name" value="GCFC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022783">
        <property type="entry name" value="GCFC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028211">
        <property type="entry name" value="Ntr2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12214">
        <property type="entry name" value="GC-RICH SEQUENCE DNA-BINDING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12214:SF0">
        <property type="entry name" value="LD29489P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07842">
        <property type="entry name" value="GCFC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15458">
        <property type="entry name" value="NTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GCF C-terminal" evidence="5">
        <location>
            <begin position="575"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="527"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="66"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="87"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="114"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="149"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW32937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="882" mass="99100" checksum="49A9AB03D9A8091D" modified="2014-02-19" version="1">MSTAKSRNFRRRGGGDTEGNDEDGDTSTLSSKPPSSAKPKKPQAPKLLSFADDEENENPRPRSAKPQRSSKPSSAHKITTLKDRIASSSPSVPSNVQPQAGTYTKETLRELQKNTRTLVTSSSRSEPKPPGEPVIVLKGLVKPVASEPQGRESDSEGDHKEVEGKLGGLGLHNGKDSFFPDEETIKAIRAKRERLRQARPAAQDYISLDGGSNHGAAEGLSDEEPEFRGRIAMFGEKVEGGKKGVFEEVEERRVDVRFKEEEEDDDEEEKMWEEEQFRKGLGKRMDEGSARVDVPVVQGAQQHKYVVPSAAVPNAGFGTIESMPALDVLSLSQQAESAKKALVENVRRLKESHGRTMSSLSKTDENLSASLLNITALENSLVVADDKYRFMQKLRNYVTNICDFLQHKAFYIEELEEQIKKLHGDRATAIFEKRTTNNDDEIVEVEAAVKAAMSVLNKKGNNMEAAKSAAQEAYTAVRKQKDLPVKLDEFGRDLNLEKRMQMKMRAVARQRKRSQLFDSNKLTSMELDDHKIEGESSTDESDSESQAYESQRDLVLQAADEIFGDASEEYGQLSLVKRRMEEWKRDYSSSYKDAYMSLSLPLVFSPYVRLELLRWDPLHKGIDFQEMKWYKLLFTYGLPEDGKDFVHDDGDADLELVPNLVEKVALPILQYEISHCWDMLSQRETMNAIAATKLIVQHVSRKSEALTDLLVSIRTRLADAVANLKVPTWSPVVLVAVPDAARVAAYRFGVSVRLLRNICLWKDVFSTSVLEKLALDELLFGKVLPHLRIISENVQDAITRTERVIASLSGVWAGPSVIGDKKHKLQPLLTYVLSLGRILERRNVPESDTSYLARRLKKILVDLNEYDHARTMARTFHLKEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRX6</accession>
    <name>V7CRX6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">NPH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G256200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NPH3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRX6"/>
    <dbReference type="STRING" id="3885.V7CRX6"/>
    <dbReference type="Gramene" id="ESW31651">
        <property type="protein sequence ID" value="ESW31651"/>
        <property type="gene ID" value="PHAVU_002G256200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR2D">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRNDSQW"/>
    <dbReference type="OrthoDB" id="624345at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043454">
        <property type="entry name" value="NPH3/RPT2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027356">
        <property type="entry name" value="NPH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32370">
        <property type="entry name" value="OS12G0117600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03000">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51649">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="BTB" evidence="7">
        <location>
            <begin position="51"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="NPH3" evidence="8">
        <location>
            <begin position="209"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="530"/>
            <end position="571"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="624" mass="71129" checksum="BFEC42FBF5AC1155" modified="2014-02-19" version="1">MKSLQVEDSRSHNDGSPKVSDKTIVIPNKLTAIADSFKGEHSWFIAPQIPTDFSVQVQETTYNVHKYPLISKCGYIGRLEIQPFISNSGNALKLENFPGGSETFETVLKFCYGLPVDFSPDNIAALRCASEFLEMTEELEDGNLISKTEAFLTFVVLSSWKDTITVLKSCENLSPWAENLQIVRRCCDSVAWKASKDDTGEDAAPNQESWWFNDVATFRIDHFMRIISAIRAKGTRPEIIGKCIMEYAKKWLPGMDVEIEGLRGYGHEKYNLEFSIFSGKKKESSGHSKDQKTIIETLISIIPHQPDAVSCKFMLQMLKMAMMYSVSPALTTELEKRVSMVLEDAEVSHLLIPRYQNGDQGKTVIMTSSSEECTMLDIDVVQRIVEYFLMHEQQQMQQQQKTRKFNVSRLLDNYLAEIARDPNLSITKFQVFAELLPESSRSYDDGLYRAIDTYLKTHPALSEHDRKRLCKIMNCEKLSLDACLHAAQNERLPLRTVVQVLFSEQVKMRTAMQEKEPAQSGIQSEQEGNQTSATMDIKALKAELENVKSKMVDLQNDYFELQQEYEKLSSKPKNSTGWTLHWRKIKNSLHTKPAGVEIGDRQDIPKSPNNILRILNPRRRLSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRZ8</accession>
    <name>V7CRZ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glutathione transferase</fullName>
            <ecNumber evidence="2">2.5.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G288500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>RX + glutathione = an S-substituted glutathione + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:17792"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="EC" id="2.5.1.18"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily. Theta family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.18" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRZ8"/>
    <dbReference type="SMR" id="V7CRZ8"/>
    <dbReference type="STRING" id="3885.V7CRZ8"/>
    <dbReference type="Gramene" id="ESW32045">
        <property type="protein sequence ID" value="ESW32045"/>
        <property type="gene ID" value="PHAVU_002G288500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0867">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IQQPMSK"/>
    <dbReference type="OrthoDB" id="422574at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009407">
        <property type="term" value="P:toxin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd03183">
        <property type="entry name" value="GST_C_Theta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03050">
        <property type="entry name" value="GST_N_Theta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1050.10:FF:000039">
        <property type="entry name" value="Glutathione S-transferase theta-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040077">
        <property type="entry name" value="GST_C_Theta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040075">
        <property type="entry name" value="GST_N_Theta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043377">
        <property type="entry name" value="GSTT1/2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44750">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE T1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44750:SF3">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13410">
        <property type="entry name" value="GST_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01153">
        <property type="entry name" value="Main.4:_Theta-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00358">
        <property type="entry name" value="Main_(cytGST)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="GST C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0216">Detoxification</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="6">
        <location>
            <begin position="4"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="7">
        <location>
            <begin position="92"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="253" mass="28560" checksum="8443A517DBDA3014" modified="2014-02-19" version="1">MMMEKLKVYADRMSQPSRAVLIFCRLNGIGFVEIKVDISKGHHLSSEFTEVNPLQKVPAIVHGSFNLSESHAILVYLNSAFPGIADHWYPSDIFRRAKINSVMDWHHSNLRNGAVSYVINTVLGPATGRTLNPKTAAEAEKVLFSSLSNLEDIWLYGDGRFLLGGSQPSIADLSMVCELMQLEVLDEKDRSRILSPYKKVLQWIDDTRASTNPHFEEVHNILYRAKKKFEQQCSRIAETQTKPSDKIGGHSKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT54</accession>
    <name>V7CT54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_001G059100g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT54"/>
    <dbReference type="SMR" id="V7CT54"/>
    <dbReference type="STRING" id="3885.V7CT54"/>
    <dbReference type="Gramene" id="ESW33304">
        <property type="protein sequence ID" value="ESW33304"/>
        <property type="gene ID" value="PHAVU_001G059100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUMM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHAQLRV"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000008">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF73">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 18" id="KW-0349">Heme</keyword>
    <keyword evidence="12 18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="8 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 18" id="KW-0964">Secreted</keyword>
    <keyword evidence="18" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149109" description="Peroxidase" evidence="18">
        <location>
            <begin position="24"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="19">
        <location>
            <begin position="24"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="34"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="67"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="122"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="201"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW33304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="35869" checksum="9323548006AD92C2" modified="2014-02-19" version="1">MSSQSLILHAEVFLLLLIAGCHAQLRVDYYRNTCPNVESIVRRAVEMKLQQTPVTAPATLRLIFHDCFVRGCDASVMLASTNHTSEKDNPINLSLAGDGFDTVIKAKAAVDSVPGCQNKVSCADILAMATRDVVALAGGPSYAVELGRLDGRVSTKASVRHHLPHPDFKLEQLNQMFASHGLTLTDLVALSGAHTIGFSHCSQFSKRIYNFKSKKSIDHTLNSAYAEKLQQDCPKNADPRTVVEMDLITPRIFDNQYYKNLQQGKGLLASDQALFTHKRTRDLVNLFASNNTVFETAFVSAMTKLGRIGIKTGNQGEIRRDCSMVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTD8</accession>
    <name>V7CTD8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="27">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_001G066400g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="19">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTD8"/>
    <dbReference type="STRING" id="3885.V7CTD8"/>
    <dbReference type="Gramene" id="ESW33404">
        <property type="protein sequence ID" value="ESW33404"/>
        <property type="gene ID" value="PHAVU_001G066400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQPF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCLANIP"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007166">
        <property type="term" value="P:cell surface receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.25.10:FF:000038">
        <property type="entry name" value="Fibrillin 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000084">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000043">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.10">
        <property type="entry name" value="Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024731">
        <property type="entry name" value="NELL2-like_EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045274">
        <property type="entry name" value="WAK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005:SF470">
        <property type="entry name" value="ASSOCIATED KINASE-LIKE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005">
        <property type="entry name" value="WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12947">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00181">
        <property type="entry name" value="EGF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57196">
        <property type="entry name" value="EGF/Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 19" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="13 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 22" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 21" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="22">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004758098" description="Protein kinase domain-containing protein" evidence="22">
        <location>
            <begin position="28"/>
            <end position="751"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="24">
        <location>
            <begin position="293"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="23">
        <location>
            <begin position="420"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00058961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW33404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="27">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="751" mass="83190" checksum="7FA9A56BE89ECAE8" modified="2014-02-19" version="1">MRLKDTQKQLIRLTVLLLMALAAASQALPGCPDSCGNVSIPYPFGIGHSSIDKKNCFLEEPLELTCTDSALFQGNVQILNISLAGKMDVLTFIARVCKNDLFGGVETYRTESYLRTPAFTISSEDNKFVSVGCDTYGYLNSFHNGTESSTGCLTRCNSLDSVESMQRSGNCTGIGCCQVDIPPGMKNISLQAYSFNNFNSTSDFNQCGFSFVVKNGNYTFSLDHFKSMPFNQSLTVIDWSVGNGTCDASMHRAGYACKSANSYCDDSPYEYGYRCKCNPGFDGNAYLLHGCQDIPECARNQHNCDSEDHCIETSGSFECFCPDGLIGNGTKEGGGCHPKQKADPFIKIVIGACVGLIALFIGVSWLYLMYQKRKVFKLKEKFFQQNGGIILRQQLSTREDSSQSTTIFSAEQLKKATNNFDESLIVGKGGYGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKQGEVVNVSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDETYIAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFNRAEEKRSLTVHFLCSLKEDRLFDVLQVGILDEENKQELMEVAILAARCLRLTGEERPSMKEVAMELEGIKLTEKHPWINTSKNFLEGQYLLHEAQSSHEHGDSSSAQQNTGYDSLRALELIDIGNGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTF4</accession>
    <name>V7CTF4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G332500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTF4"/>
    <dbReference type="STRING" id="3885.V7CTF4"/>
    <dbReference type="Gramene" id="ESW32560">
        <property type="protein sequence ID" value="ESW32560"/>
        <property type="gene ID" value="PHAVU_002G332500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HENYSTH"/>
    <dbReference type="OrthoDB" id="8117402at2759"/>
    <dbReference type="PhylomeDB" id="V7CTF4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:000554">
        <property type="entry name" value="protein indeterminate-domain 12-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055187">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055185">
        <property type="entry name" value="C2CH-4th_BIRD-IDD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055186">
        <property type="entry name" value="C2H2-2nd_BIRD-IDD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031140">
        <property type="entry name" value="IDD1-16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10593:SF221">
        <property type="entry name" value="PROTEIN INDETERMINATE-DOMAIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10593">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE RIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22995">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22992">
        <property type="entry name" value="C2CH-4th_BIRD-IDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22996">
        <property type="entry name" value="C2H2-2nd_BIRD-IDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12874">
        <property type="entry name" value="zf-met"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="11">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="12"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="278"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="12"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW32560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="395" mass="44165" checksum="77F63152D787E8DA" modified="2014-02-19" version="1">MASLVRIDSLVNNFSPSSQNAPPTPTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPLVKKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSSHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNVGCLGPETQPAVCLSQTASSPSSENNFTTGVIIPNPIVTVVEPALFTNNDNKVNKLQPNLELQLSSATPTAELQLSIGSLEISNTREKSLGERVKDEAREQLRIAVAEKAYAEEARKQATRQMELAELEFTNAKRIRQQALEELDKACALKDHAIKQINSTMLQITCLACKHHFQSPTITCAAPPDQTSFVFSYITTDGGRLGKHRVKPINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTU1</accession>
    <name>V7CTU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SPOROCYTELESS-like EAR-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G3114000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTU1"/>
    <dbReference type="STRING" id="3885.V7CTU1"/>
    <dbReference type="Gramene" id="ESW32311">
        <property type="protein sequence ID" value="ESW32311"/>
        <property type="gene ID" value="PHAVU_002G3114000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SRMW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIMHMRV"/>
    <dbReference type="OrthoDB" id="653455at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040356">
        <property type="entry name" value="SPEAR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33388">
        <property type="entry name" value="OS01G0212500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33388:SF18">
        <property type="entry name" value="PROTEIN SPEAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="109" mass="11866" checksum="97FAB0E6FA804D94" modified="2014-02-19" version="1" fragment="single">MDSSYLGEPNFGNERSSVSSSRKGKKNNSDRPKQPQRGLGVAQLEKIRLHSQMACGYHPSLHGPSPSTFTNEDPRVQIAYSSVPSSSFSYSSSPTSSYAASYGFQPDIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVE5</accession>
    <name>V7CVE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">NB-ARC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G062600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVE5"/>
    <dbReference type="SMR" id="V7CVE5"/>
    <dbReference type="STRING" id="3885.V7CVE5"/>
    <dbReference type="Gramene" id="ESW33353">
        <property type="protein sequence ID" value="ESW33353"/>
        <property type="gene ID" value="PHAVU_001G062600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IASEQIC"/>
    <dbReference type="OrthoDB" id="2018467at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF61">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="26"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="164"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="387"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="785" mass="89364" checksum="6BA3637CC554C083" modified="2014-02-19" version="1">MAESFLFSIAESLVAKLASHAFQEASRVEHNHQLREWLTQLKTVFSNAEDLLDEFECQTQRKKVVKAHGSSKDKVSHFFSSSNPLLYRYKMAQQIKDISNRLDKVADDSYKFSLQIIDVHTRVVHGRDMTHSRVNDSDVIGRKHDKEKIIELLMQQNSNDDDTSLGKTTLAKFVFNDSRIQECFPMKMWVCVSDEFDIKQLIIKIINSANDEDAPLHQQNLNMLDLELLQNQLKKKLSGQKFLLVLDNVWNEDRVKWVELMNLIQISVSGSKILVSTRSHSIASMMGSEDSLSLFVKWAFKEGEEQKHPHLVMIGREIVTKCRGVPLAVRTLGSLLFSKFEASEWKYVRDNAIWNLPQKKDDILPALKLSYDLMPSYLRQCFGLLSLYPKDYGLNNYDITALLGALGLIAPQKKNMTLQDVANQYLYELLSISFLQDFVDNGTVYVFKIHDLVHDLAQFVSRKFQHNVSSNIQNIPDNVRHLSFAESSLFGNLVTKKSTVVRTILFPNGAAANSEALLNTCLSKFKCLRVLNLRGATFETLPRSIAKLPESICKLRSLQLLRLDGCMKLEALPKGLRKLISLHHLEFSIKQTVLPVNEIANLGLLEILTIESCHNVEPIFGGVKFPVLKVLCVIDCQKTLVVKACGNLDLELWKGNHDEEQSHKLKLKTALFSALSQLHALPKCLQEAANSLRCLLISNCYNIETLSDWFTTMTNLKTLSIKYCPKLVSLPDDIHRLTELESLRIKGCAELCKKYQPYVGVFWAKISHIIRHFKGVSIFIQEPTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVM9</accession>
    <name>V7CVM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">endo-polygalacturonase</fullName>
            <ecNumber evidence="3">3.2.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G135100g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(1,4-alpha-D-galacturonosyl)n+m + H2O = (1,4-alpha-D-galacturonosyl)n + (1,4-alpha-D-galacturonosyl)m.</text>
            <dbReference type="EC" id="3.2.1.15"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.15" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVM9"/>
    <dbReference type="SMR" id="V7CVM9"/>
    <dbReference type="STRING" id="3885.V7CVM9"/>
    <dbReference type="Gramene" id="ESW34227">
        <property type="protein sequence ID" value="ESW34227"/>
        <property type="gene ID" value="PHAVU_001G135100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRJW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="187139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009901">
        <property type="term" value="P:anther dehiscence"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009830">
        <property type="term" value="P:cell wall modification involved in abscission"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010047">
        <property type="term" value="P:fruit dehiscence"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000028">
        <property type="entry name" value="Polygalacturonase QRT2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31375">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00502">
        <property type="entry name" value="POLYGALACTURONASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8 12" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="7 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756215" description="endo-polygalacturonase" evidence="13">
        <location>
            <begin position="24"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00034074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW34227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="459" mass="50773" checksum="0E5E33CA73981DDB" modified="2014-02-19" version="1">MALLKHLLLSLPIFIISFVFCHATLQEDPLTSIYVHHSPSTDNGGTLFKNFNKQSINLLSLNRLEKRSSLRKVNVNDYGAEGSGDTDDSEAFKKAWDVVCSSGEAILVVPEENYLLKPIRFSGPCKPNIEVQISGTLEASDDPSDYKEDSSHWLVFENIKKLFVYGGGTIDGNGKIWWKNSCKRNKKRPCKDAPTALTFDNCEDLIVENLNIENAQQMHVSFQDSENVKVSGLNVIAPEDSPNTDGIHVTNTQNIQISDSVIGTGDDCISIVHGSKNVEATNITCGPGHGISIGSLGAGKSKEIVSGILVNGAKIFGTKNGVRIKTWQGGSGSASDIQFQNIEMENVTNPIIINQNYCDKKKKPCKKRLLQKSAIQIKNVLYQNITGTSSSDIAVKFDCSEKFPCQEIKLQNIDLKCEDGDDAEAWCNNVELSYLGHVKPRCNSENIFTTFWKYFSWYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYE4</accession>
    <name>V7CYE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G213500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYE4"/>
    <dbReference type="Gramene" id="ESW35177">
        <property type="protein sequence ID" value="ESW35177"/>
        <property type="gene ID" value="PHAVU_001G213500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RHY4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LRIAWII"/>
    <dbReference type="OrthoDB" id="1913803at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37172">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37172:SF3">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="289" mass="32977" checksum="11E1FBE4E0398530" modified="2014-02-19" version="1">MVATSSLQQKTKDLLKGITPKEIFYIFTFTILTLLLPLSFLLLAKFSDAQYYLQTLTWYHSPHHFPYALTLALHINPLILYVLVSLFSMASFIHVLTGKIITLRDPSSPSSTVVQPRLYTAWILLCTFQVCVGLGIEGSIEVGLYDSDESSFGVERSFLSRVVFLVGLHQTTQVWARMVVRPVVDDTVFGVEREVRLVERAVVAASLGGLWWWRLREDVESLVVMVEAKKEQLMDVRVSEFVGWWLYNLTVTIGMVKVIRGLIEMATIFLWRRNATISKVEHCEIDDNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYT2</accession>
    <name>V7CYT2_PHAVU</name>
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        <recommendedName>
            <fullName evidence="2">Putative plant transposon protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G121300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYT2"/>
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        <property type="protein sequence ID" value="ESW34066"/>
        <property type="gene ID" value="PHAVU_001G121300g"/>
    </dbReference>
    <dbReference type="OMA" id="VEHAYMI"/>
    <dbReference type="OrthoDB" id="1436833at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046796">
        <property type="entry name" value="Transposase_32_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20167">
        <property type="entry name" value="Transposase_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative plant transposon protein" evidence="2">
        <location>
            <begin position="21"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="198" mass="22460" checksum="7B1E2FC1D906E6C9" modified="2014-02-19" version="1">MDVNVQDPPRSHGDLEGGEGTQEMRSRVGGRWVPFDRDSISAFLGDPLQLRGDDGCTYHYLRARTYGFNDDEVARDICLVNHSYQISPTGTPWRILRKQMKTLSQVWMVFMLANMVPIGLVSDLNIPRCHLLYFLLKENYFVDIAKIIYHGIYKFVRLEVSHNNQKAKGSLGFPTLITAFCASHGAEVNPSVKKHTSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYT7</accession>
    <name>V7CYT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Hcy-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G153900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="SMR" id="V7CYT7"/>
    <dbReference type="STRING" id="3885.V7CYT7"/>
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        <property type="protein sequence ID" value="ESW34450"/>
        <property type="gene ID" value="PHAVU_001G153900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1579">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSQPEVI"/>
    <dbReference type="OrthoDB" id="261426at2759"/>
    <dbReference type="PhylomeDB" id="V7CYT7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008898">
        <property type="term" value="F:S-adenosylmethionine-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
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    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
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        <property type="project" value="InterPro"/>
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    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033528">
        <property type="term" value="P:S-methylmethionine cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="Homocysteine S-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="entry name" value="Homocysteine-binding-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017226">
        <property type="entry name" value="BHMT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051486">
        <property type="entry name" value="Hcy_S-methyltransferase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF007020">
        <property type="entry name" value="PRK09485.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46015:SF1">
        <property type="entry name" value="HOMOCYSTEINE S-METHYLTRANSFERASE-LIKE ISOFORM 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46015">
        <property type="entry name" value="ZGC:172121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037505">
        <property type="entry name" value="Betaine_HMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="Homocysteine S-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="6">
        <location>
            <begin position="4"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="308"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW34450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="334" mass="36433" checksum="9C57B5E094E39AF7" modified="2014-02-19" version="1">MSSLIADLLRQSGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGYTEEESEAMLRRSVEIAREARELYYKECSSGDGADGKILKQRPILIAASVGSYGAYLADGSEYSGDYGDAITKTTLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAQLLEEENIQIPAWFAFNSKDGVNVVSGDSLAECGSIAESCKNVVAVGINCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDAELKEWVQNTGETDENFISYVTKWRELGASLVGGCCRTTPATIRKIYSVLSSKESAILGKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZD6</accession>
    <name>V7CZD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">Phenylalanine ammonia-lyase</fullName>
            <ecNumber evidence="6 13">4.3.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G1777001g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 13">
            <text>L-phenylalanine = (E)-cinnamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:21384"/>
            <dbReference type="ChEBI" id="CHEBI:15669"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58095"/>
            <dbReference type="EC" id="4.3.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Phenylpropanoid metabolism; trans-cinnamate biosynthesis; trans-cinnamate from L-phenylalanine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the PAL/histidase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.24" evidence="6 13"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZD6"/>
    <dbReference type="STRING" id="3885.V7CZD6"/>
    <dbReference type="Gramene" id="ESW34748">
        <property type="protein sequence ID" value="ESW34748"/>
        <property type="gene ID" value="PHAVU_001G1777001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0222">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="XSESKAL"/>
    <dbReference type="OrthoDB" id="10051290at2759"/>
    <dbReference type="UniPathway" id="UPA00713">
        <property type="reaction ID" value="UER00725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045548">
        <property type="term" value="F:phenylalanine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009800">
        <property type="term" value="P:cinnamic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006559">
        <property type="term" value="P:L-phenylalanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00332">
        <property type="entry name" value="PAL-HAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.275.10:FF:000009">
        <property type="entry name" value="Phenylalanine ammonia-lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.200.10">
        <property type="entry name" value="Fumarase/aspartase (Central domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="entry name" value="Fumarase/aspartase (N-terminal domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001106">
        <property type="entry name" value="Aromatic_Lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022313">
        <property type="entry name" value="Phe/His_NH3-lyase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005922">
        <property type="entry name" value="Phe_NH3-lyase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01226">
        <property type="entry name" value="phe_am_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10362">
        <property type="entry name" value="HISTIDINE AMMONIA-LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00221">
        <property type="entry name" value="Lyase_aromatic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="L-aspartase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00488">
        <property type="entry name" value="PAL_HISTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-0585">Phenylalanine catabolism</keyword>
    <keyword evidence="8 13" id="KW-0587">Phenylpropanoid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW34748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="411" mass="44306" checksum="87E49531288A854B" modified="2014-02-19" version="1" fragment="single">MEATTLTNAHQNCSFCLPSAKTTDPLNWGTAAEALKGSHLDEVKRMVAEYRQPLVRLGGETLTIAQVAAVSGHDQGVRVELSESAREGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLTAKQAFELANINSEFYELQPKEGLALVNGTAVGSGMASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1Q6</accession>
    <name>V7D1Q6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RCC1-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G236500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1Q6"/>
    <dbReference type="SMR" id="V7D1Q6"/>
    <dbReference type="STRING" id="3885.V7D1Q6"/>
    <dbReference type="Gramene" id="ESW35460">
        <property type="protein sequence ID" value="ESW35460"/>
        <property type="gene ID" value="PHAVU_001G236500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1426">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKVFCWG"/>
    <dbReference type="OrthoDB" id="5370059at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058923">
        <property type="entry name" value="RCC1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF382">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25390">
        <property type="entry name" value="WD40_RLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="66"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="RCC1-like" evidence="4">
        <location>
            <begin position="202"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="237"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="317"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="369"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="423"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="141"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="152"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="167"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="195"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF25390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="475" mass="49893" checksum="53FFFD26CFC8FE84" modified="2014-02-19" version="1">MNGEGSEAMQVEKERLVFMWGYLPGALPQRTPLLTPVLVRVPPSVYSWGDVCGGGCGFAMAISELGKLITWGSSDDSGQSYVTSGKHGEIPEPFPLPTEVTIVKAASGWAHCVAVTDCGEVYTWGWRECVPSGKVFGESLTGVNPEKDVPGRQSSFLTEQVSPHSQGSKSTGGTASSTSGEESTKRRRVSSAKQTAETSSSSDDTTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINTSSYGKDMSLSLARGSMSSDGQNFRVLGSYIKVIACGGRHSAVITDAGVVLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAETVPRLLDCPSLENVNVKKISCGARHSALITDKGRVFCWGWNKYGQLGLGDVIDRNIPSEVTIQGCVAKNVACGWWHTLLLAESPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7D304</accession>
    <name>V7D304_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ketoreductase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G249900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D304"/>
    <dbReference type="SMR" id="V7D304"/>
    <dbReference type="STRING" id="3885.V7D304"/>
    <dbReference type="Gramene" id="ESW35616">
        <property type="protein sequence ID" value="ESW35616"/>
        <property type="gene ID" value="PHAVU_001G249900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1209">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEDHCDV"/>
    <dbReference type="OrthoDB" id="2102561at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05374">
        <property type="entry name" value="17beta-HSD-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000261">
        <property type="entry name" value="NADPH-dependent 1-acyldihydroxyacetone phosphate reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057326">
        <property type="entry name" value="KR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44169">
        <property type="entry name" value="NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44169:SF6">
        <property type="entry name" value="NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00822">
        <property type="entry name" value="PKS_KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ketoreductase" evidence="4">
        <location>
            <begin position="9"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="30279" checksum="30E2C04A0801C60B" modified="2014-02-19" version="1">MDGEDAPKPVVIITGCSTGGIGHALACAFAEKKCKVVATSRSRSSMAELEHDHRFLLEELDVQSDESVSRVVDAVVQTYGRIDVLVNNAGIQCVGPLAEVPLSSIQNTFDTNVFGSLRMVQAVVPHMATRKKGKIVNIGSVAALASGPWSGTYTASKAALHALTDTLRMELGHFGIDVVNVLPGAIKSNIGDSAVASYNRMPEWKLFKPFEAAIRDRAYFSQKSKSTPTYEFAKNTVAAILKEKPPAWFTYGHYSTVMAIMYHLPISVRDFILKKAMKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2012-04-18" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>H6WQB3</accession>
    <name>H6WQB3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">allantoinase</fullName>
            <ecNumber evidence="6">3.5.2.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G186800g</name>
    </gene>
    <organism evidence="13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2011-12" db="EMBL/GenBank/DDBJ databases">
            <title>Cloning and expression of allantoinase from Phaseolus vulgaris.</title>
            <authorList>
                <person name="Piedras P."/>
                <person name="Raso M.J."/>
                <person name="Quiles F.A."/>
                <person name="Pineda M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="14" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(S)-allantoin + H2O = allantoate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17029"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15678"/>
            <dbReference type="ChEBI" id="CHEBI:17536"/>
            <dbReference type="EC" id="3.5.2.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Nitrogen metabolism; (S)-allantoin degradation; allantoate from (S)-allantoin: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.5" evidence="6"/>
    <dbReference type="EMBL" id="JQ282796">
        <property type="protein sequence ID" value="AFA36176.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="H6WQB3"/>
    <dbReference type="SMR" id="H6WQB3"/>
    <dbReference type="STRING" id="3885.H6WQB3"/>
    <dbReference type="Gramene" id="ESW20172">
        <property type="protein sequence ID" value="ESW20172"/>
        <property type="gene ID" value="PHAVU_006G186800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFNEPGR"/>
    <dbReference type="OrthoDB" id="10258955at2759"/>
    <dbReference type="UniPathway" id="UPA00395">
        <property type="reaction ID" value="UER00653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004038">
        <property type="term" value="F:allantoinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000256">
        <property type="term" value="P:allantoin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006145">
        <property type="term" value="P:purine nucleobase catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.140:FF:000032">
        <property type="entry name" value="Allantoinase Dal1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017593">
        <property type="entry name" value="Allantoinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056854">
        <property type="entry name" value="ALN_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050138">
        <property type="entry name" value="DHOase/Allantoinase_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03178">
        <property type="entry name" value="allantoinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43668">
        <property type="entry name" value="ALLANTOINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43668:SF2">
        <property type="entry name" value="ALLANTOINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24890">
        <property type="entry name" value="ALN_composite"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="Composite domain of metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="8 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Allantoinase composite" evidence="12">
        <location>
            <begin position="46"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Amidohydrolase-related" evidence="11">
        <location>
            <begin position="101"/>
            <end position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00053421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF24890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="AFA36176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW20172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="512" mass="56703" checksum="E1B34669BC8C8DC4" modified="2012-04-18" version="1">MDQFIWRVLPLLSILVSFLVFFYFQNSHTAQLYPLIKFPRSKCSLLPHHHFWISSKRIVTPQGIISGSVEINEGRIVSVIEGYGKQGQSKQEEIIDYGDAVVMPGLIDVHVHLDEPGRTEWEGFDTGTRAAAAGGVTTVVDMPLNNYPSTVSKETLKLKLDAAEDKIYVDVGFWGGLVPENALNLTILDDLLSAGVLGVKSFMCPSGINDFPMTTIDHIKAGLSVLAKYKRPIVVHAELQQDYGNHLDINDNRDPHDYLTYLNTRPPSWEEAAIRQLVGVSKDTGIGGPLEGAHVHIVHLSDSSASLDLIKEAKSRGDSITVETCPHYLAFTSEEIPNGDTRFKCSPPIRDAHNKDKLWEAVLEGHIDLLTTDHSPTVPELKLLEEGDFLKAWGGISSLQFNLPVTWSYGKKYGLTLEQLSLLWSKRPAALAGIESKGTIEVGNHADIVVWQPEQEFDLDDNYPVFIKHYELSAYMGRRLSGKVLDTFVRGNLVFKDGKHAPAACGVQILAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGW7</accession>
    <name>V7AGW7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G131100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGW7"/>
    <dbReference type="STRING" id="3885.V7AGW7"/>
    <dbReference type="Gramene" id="ESW04857">
        <property type="protein sequence ID" value="ESW04857"/>
        <property type="gene ID" value="PHAVU_011G131100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW04858">
        <property type="protein sequence ID" value="ESW04858"/>
        <property type="gene ID" value="PHAVU_011G131100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="426882at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="CHOLINE MONOOXYGENASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756:SF5">
        <property type="entry name" value="CHOLINE MONOOXYGENASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="200" mass="22455" checksum="ED5ABD4095A00A51" modified="2014-02-19" version="1">MSKDSLTQKKKASVTITQAPTEREEETTSGLVFKRKRKATAPPTEHSHLDGRAPHQDIVLSEGHAPHRDVIVIQEGEAKSSKRKSLWDSNFDVPTYGEHGRTYGFNGALIKATRISGMRNFNINDFGLLPIKAATWGPFVLLNLEKENVSQKKVDSHNVSKEWQDSCSEVLSSSGIDSSLSYVCRREYTIECNWKVFCDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIR1</accession>
    <name>V7AIR1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G120900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIR1"/>
    <dbReference type="STRING" id="3885.V7AIR1"/>
    <dbReference type="Gramene" id="ESW04733">
        <property type="protein sequence ID" value="ESW04733"/>
        <property type="gene ID" value="PHAVU_011G120900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAV9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1686935at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="10994" checksum="4E21729665B5AB53" modified="2014-02-19" version="1">MCKCRSHGTFPLFGLQSSHLNICYSHQDLHRRPRRPTHRVLVLAPTASSSYPKGNFGGNQLLDSSISRSPLYPSQMNDLHVSIAAGVHQSFLWLPPAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJV3</accession>
    <name>V7AJV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G000200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJV3"/>
    <dbReference type="SMR" id="V7AJV3"/>
    <dbReference type="STRING" id="3885.V7AJV3"/>
    <dbReference type="Gramene" id="ESW05877">
        <property type="protein sequence ID" value="ESW05877"/>
        <property type="gene ID" value="PHAVU_010G000200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEAQWME"/>
    <dbReference type="OrthoDB" id="691673at2759"/>
    <dbReference type="PhylomeDB" id="V7AJV3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd12203">
        <property type="entry name" value="GT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000032">
        <property type="entry name" value="Zinc finger and SCAN domain-containing 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654">
        <property type="entry name" value="FI21293P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654:SF85">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="35"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="132"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="145"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW05877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="271" mass="32237" checksum="C78DDD7E60CBF402" modified="2014-02-19" version="1">MEGHHLHRHHGQQQQRLQPQNTSANVDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKGTQLSSDEEEDGNEESAEAGGGRKKKKAKIASGGGGGSSSLNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK69</accession>
    <name>V7AK69_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G101000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK69"/>
    <dbReference type="STRING" id="3885.V7AK69"/>
    <dbReference type="Gramene" id="ESW04511">
        <property type="protein sequence ID" value="ESW04511"/>
        <property type="gene ID" value="PHAVU_011G101000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1Z8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKSHGFH"/>
    <dbReference type="OrthoDB" id="1435900at2759"/>
    <dbReference type="PhylomeDB" id="V7AK69"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264:SF25">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="151" mass="16969" checksum="2C649E41D9D93B34" modified="2014-02-19" version="1">MVHQVIVPPQPVHSRRRRGVGEVAGGGAAECAAVCCCFPCVVIHLAVLAVYKVPKRLVVKAARKRRRRLMRNKNNGNVVVGNKADDIVVLHPHRASSVEGWDYDVGTTRLDEFLKQIPENETDEEEQGLEKEMWARFAGTGFWRSESQRQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKN7</accession>
    <name>V7AKN7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G114500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKN7"/>
    <dbReference type="Gramene" id="ESW04661">
        <property type="protein sequence ID" value="ESW04661"/>
        <property type="gene ID" value="PHAVU_011G114500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SEXM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1591000at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="70" mass="7963" checksum="96184FCF2686A217" modified="2014-02-19" version="1" fragment="single">TTSPISPTLSTQHSTTQFFSLLKEFFLVMAGFEQQVKDRAKELKVLLKKGVKIVGDSCKKGWNKVKHIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKV6</accession>
    <name>V7AKV6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G0291001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKV6"/>
    <dbReference type="Gramene" id="ESW06212">
        <property type="protein sequence ID" value="ESW06212"/>
        <property type="gene ID" value="PHAVU_010G0291001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1534087at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF560">
        <property type="entry name" value="RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="3">
        <location>
            <begin position="45"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="837" mass="95337" checksum="04C028406C1F2A28" modified="2014-02-19" version="1" fragment="single">SDAELVDEIVKTVLNLPVLSATKFPVGLQSHMEDLIRTIKYKSTEVCKIAICGQGGSGKTTLAKAIYHQIHDTFTEKSFIEDIGQVSRIRGDLRVLEQLLSDVLKSKVEIDSFEMGRTMIRERLSGKRVLIVLDDVPEFNRELLWEYRHWFGGGSVIIITTIPENLPRIYEVDSVFQVKLMNANESLELLSWHAFREAKPKQEYHVLAERVVSYCGGLPLALEVIGSYLYERTKEEWNSVLLRLDNIPQHDLQRKLKISFDRLRNQMEKDLFLDVCCSFVGKSRSYVTKILNGCGIDADSGIRVLIKHSLIQINKDNKLIMHPLLREMGREIIRQISGKEPEKNSKLWFDKDARYSLSENTLFSSKGTKIIQRLPTGRDFFGSYPLHVSDPSRLLKLGRDYHLKKLRWISLRGFSSEYLPNDFYLHDAIAIDVKHSLLRFLWKEPQVLAWLKILNLSHSKYLRETPHFSGLPSLEQLILKDCPRLRKVHRSIGRLCNLILLNLKDCTSLSNLPREIYKLKCLKTLILSGCLKIDLMEKDIVRMKSLITLMAENTVMKQLPFTIVSPKIIGYISLRGSEGLSHNLFPSIIRSRMSPTMNPLSYIHPFMDMEDNSWDDIAPFLRSLANLRTVLVECDAEFHLSEQVKTTVVEYGGNNTESAISKNHLKSFLTGVGRYKEFFNTVSDNIPKVFASSESCDVSLPGDNDPYWLAHMGDGHSVSLTVPQDRVVKGMAFCVDYLSTSKIIEPKLTTVLIVNYTNCTCQIHNHGTVISSNDEDWPGIMSNLGSGDKVEIFVSFGNGLVVKNTTAYLICDESNDLEKEPVPKKISLLKFIKKTLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALK6</accession>
    <name>V7ALK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Stress up-regulated Nod 19 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G022300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALK6"/>
    <dbReference type="STRING" id="3885.V7ALK6"/>
    <dbReference type="Gramene" id="ESW06130">
        <property type="protein sequence ID" value="ESW06130"/>
        <property type="gene ID" value="PHAVU_010G022300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRR9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1339673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011692">
        <property type="entry name" value="Stress_up-reg_Nod19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33390">
        <property type="entry name" value="STRESS UP-REGULATED NOD 19 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33390:SF4">
        <property type="entry name" value="STRESS UP-REGULATED NOD 19-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07712">
        <property type="entry name" value="SURNod19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755720" description="Stress up-regulated Nod 19 protein" evidence="1">
        <location>
            <begin position="25"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="413" mass="46704" checksum="69989A90E4F06CBB" modified="2014-02-19" version="1">MKILSKVAIILLSMMMLLPITTHSIVVESNESYIKSATFLSEEFEVGPGKIAVKTLLDIDFPKGHIGVKSFDVEVVDEDGKSVPLYEAYLHHWFAVKYIENITLSHYIKQSHDLRSGIEFERNDGMCQGFLLPHYWGLGGESRGTSSNLPDPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGAHDRKGCSECRCKLLNLPKNFYNVTMGINGQLLSRNYKGGLFCCQDNLQCKLRNDFHGPPRKLSLRYKIRWVDWDEHQVPLRFYILDSTDRVRSNGSTLIHDCQAEYTIPRNHNSDSPHVKKANIPMTKGGYLIYGTAHMHTGVVNTTLYGQDRRVLCTSNPKYGSGKEAGNENGYLVGMSVCYPTPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNKNLTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMD9</accession>
    <name>V7AMD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tf2-1-like SH3-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G064600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMD9"/>
    <dbReference type="Gramene" id="ESW06639">
        <property type="protein sequence ID" value="ESW06639"/>
        <property type="gene ID" value="PHAVU_010G064600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="786789at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056924">
        <property type="entry name" value="SH3_Tf2-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24626">
        <property type="entry name" value="SH3_Tf2-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tf2-1-like SH3-like" evidence="1">
        <location>
            <begin position="79"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF24626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="123" mass="13864" checksum="2580B1883CE24CCD" modified="2014-02-19" version="1">MDMFYRNSDAAIEKRTKEKLRQTNIKEACDQNLKASVVNILLDLDMIVAIGNVVKLVTRKRIGEEIKDHNLRVVIRLQAPKYYGPLGIMGTVGQVAYKLLFPPGLCLYPVFHVSLSENAVGNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMF3</accession>
    <name>V7AMF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Ferritin</fullName>
            <ecNumber evidence="14">1.16.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G065600g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.</text>
    </comment>
    <comment type="function">
        <text evidence="14">Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>4 Fe(2+) + O2 + 4 H(+) = 4 Fe(3+) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11148"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.16.3.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="11">Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the ferritin family.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="14"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMF3"/>
    <dbReference type="SMR" id="V7AMF3"/>
    <dbReference type="STRING" id="3885.V7AMF3"/>
    <dbReference type="Gramene" id="ESW06654">
        <property type="protein sequence ID" value="ESW06654"/>
        <property type="gene ID" value="PHAVU_010G065600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2332">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RDEWRNS"/>
    <dbReference type="OrthoDB" id="186462at2759"/>
    <dbReference type="PhylomeDB" id="V7AMF3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008198">
        <property type="term" value="F:ferrous iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004322">
        <property type="term" value="F:ferroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:intracellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01056">
        <property type="entry name" value="Euk_Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1260.10:FF:000006">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001519">
        <property type="entry name" value="Ferritin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009040">
        <property type="entry name" value="Ferritin-like_diiron"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014034">
        <property type="entry name" value="Ferritin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11431">
        <property type="entry name" value="FERRITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11431:SF101">
        <property type="entry name" value="FERRITIN-2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="Ferritin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00540">
        <property type="entry name" value="FERRITIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00204">
        <property type="entry name" value="FERRITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50905">
        <property type="entry name" value="FERRITIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="9 13 14" id="KW-0408">Iron</keyword>
    <keyword evidence="3 14" id="KW-0409">Iron storage</keyword>
    <keyword evidence="6 13 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0934">Plastid</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Ferritin-like diiron" evidence="15">
        <location>
            <begin position="88"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00026060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR601519-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU361145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW06654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="260" mass="29138" checksum="AD0F3755DC7096AB" modified="2014-02-19" version="1">MALSCSKVLGFSLSNVVGCDDVKKKLTLCSFSSLSLSIKSGGSRNMRVRAAASEAPATFTGVVFEPFQELKKDYLAVPIAQNVSLARQNFSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNLRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQMADFIESEFLYEQVESIKKIAEYVSQLRLVGKGHGVWHFDQRLLHDGDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANR1</accession>
    <name>V7ANR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">L-gulonolactone oxidase</fullName>
            <ecNumber evidence="4">1.1.3.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_010G118400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-gulono-1,4-lactone + O2 = L-ascorbate + H2O2 + H(+)</text>
            <dbReference type="Rhea" id="RHEA:32363"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:17587"/>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
            <dbReference type="EC" id="1.1.3.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; L-ascorbate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.3.8" evidence="4"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANR1"/>
    <dbReference type="STRING" id="3885.V7ANR1"/>
    <dbReference type="Gramene" id="ESW07302">
        <property type="protein sequence ID" value="ESW07302"/>
        <property type="gene ID" value="PHAVU_010G118400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4730">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCSQDIH"/>
    <dbReference type="OrthoDB" id="610608at2759"/>
    <dbReference type="UniPathway" id="UPA00132"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003885">
        <property type="term" value="F:D-arabinono-1,4-lactone oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050105">
        <property type="term" value="F:L-gulonolactone oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019853">
        <property type="term" value="P:L-ascorbic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.2520:FF:000003">
        <property type="entry name" value="L-gulonolactone oxidase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.465.10:FF:000033">
        <property type="entry name" value="L-gulonolactone oxidase 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007173">
        <property type="entry name" value="ALO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050432">
        <property type="entry name" value="FAD-linked_Oxidoreductases_BP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055154">
        <property type="entry name" value="GULLO2-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010030">
        <property type="entry name" value="GULO_Plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01677">
        <property type="entry name" value="pln_FAD_oxido"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878">
        <property type="entry name" value="GULONOLACTONE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878:SF67">
        <property type="entry name" value="L-GULONOLACTONE OXIDASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04030">
        <property type="entry name" value="ALO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22906">
        <property type="entry name" value="GULLO2-like_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0060">Ascorbate biosynthesis</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753456" description="L-gulonolactone oxidase" evidence="11">
        <location>
            <begin position="23"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="12">
        <location>
            <begin position="51"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW07302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="580" mass="64018" checksum="4E62B5739DBC1ED3" modified="2014-02-19" version="1">MMFQKAFPSTLVFLFFCVAVFSTPPEDPIKCSSGNTTCTITNSYGMFPDRSICHASKVLYPTTEQELVSMVASAARSKSKMKVATRFSHSIPKLVCPEGQNGVLISTKYLNKIVKVDVEARTMTVESGVTMKDLISEAAKAGLALPYAPYWWGLTIGGLMGSGAHGSTLWGKGSSVHDYVVNLRIVRPASPQEGYAKVESLNEQHEDLNAAKVSLGVLGVISQITLKLEGSFKRSITYVAKNDSDLGEEVGDFGYEHEFGDITWYPSQQRAVYRVDDRVPINASGNGLYDFIPFRPTSSLALALLRTTEDIQESAGDADGKCINAKTTTNTLITSAYGLTNNGIIFTGYPVIGFQNRLQASGTCLDSLKDGKITACAWDSRVKGEFFHQTTFSIGLSVVKDFIEDVQKLVRLEPKGLCGIELYNGILMRYVKASKAYLGKQEDALDIDITYYRSKDPMTPRLYEDILEEIEQLGIFKYGGIPHWGKNRNLAFEGAIKKYKNAEKFLKVKEKYDSEGLFSSTWTDQILGLKDGLIIVKDGCALEGLCICSQDSHCNPSKGYYCRPGKVYKEARVCTHLRSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANZ1</accession>
    <name>V7ANZ1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G117300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANZ1"/>
    <dbReference type="Gramene" id="ESW07289">
        <property type="protein sequence ID" value="ESW07289"/>
        <property type="gene ID" value="PHAVU_010G117300g"/>
    </dbReference>
    <dbReference type="OMA" id="LCHVFAD"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="65" mass="7092" checksum="A8FC822DB81376F1" modified="2014-02-19" version="1">MFSSIRSVCLCHVFADLATFETQLDILLFFNSSLTLSLGFPCLCSVSDLYHLAGPGVFDEEEPSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP02</accession>
    <name>V7AP02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">tRNA(His) guanylyltransferase</fullName>
            <ecNumber evidence="5">2.7.7.79</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_010G125700g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>a 5'-end ribonucleotide-tRNA(His) + GTP + ATP + H2O = a 5'-end phospho-guanosine-ribonucleotide-tRNA(His) + AMP + 2 diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:54564"/>
            <dbReference type="Rhea" id="RHEA-COMP:14193"/>
            <dbReference type="Rhea" id="RHEA-COMP:14917"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:138282"/>
            <dbReference type="ChEBI" id="CHEBI:141847"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.7.79"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
            <location evidence="3">Nucleoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the tRNA(His) guanylyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.79" evidence="5"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP02"/>
    <dbReference type="SMR" id="V7AP02"/>
    <dbReference type="STRING" id="3885.V7AP02"/>
    <dbReference type="Gramene" id="ESW07387">
        <property type="protein sequence ID" value="ESW07387"/>
        <property type="gene ID" value="PHAVU_010G125700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ILVWINA"/>
    <dbReference type="OrthoDB" id="62560at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005654">
        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008193">
        <property type="term" value="F:tRNA guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.3000:FF:000002">
        <property type="entry name" value="tRNA(His) guanylyltransferase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3000">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025845">
        <property type="entry name" value="Thg1_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024956">
        <property type="entry name" value="tRNAHis_GuaTrfase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007537">
        <property type="entry name" value="tRNAHis_GuaTrfase_Thg1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038469">
        <property type="entry name" value="tRNAHis_GuaTrfase_Thg1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12729">
        <property type="entry name" value="TRNA(HIS) GUANYLYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12729:SF6">
        <property type="entry name" value="TRNA(HIS) GUANYLYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04446">
        <property type="entry name" value="Thg1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14413">
        <property type="entry name" value="Thg1C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="tRNAHis guanylyltransferase catalytic" evidence="15">
        <location>
            <begin position="6"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Thg1 C-terminal" evidence="16">
        <location>
            <begin position="130"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="tRNAHis guanylyltransferase catalytic" evidence="15">
        <location>
            <begin position="264"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="Thg1 C-terminal" evidence="16">
        <location>
            <begin position="397"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF04446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF14413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW07387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="503" mass="58783" checksum="CAC0C56D0D339996" modified="2014-02-19" version="1">MANSKYEYVKCFEVEEEVMFPNIILVWINACSLHKPYDLNTLKLMNSCAVETLEEYADVVFAYGFSDEYTFVLKKTSKFYERRASKVLSIITSFFSSVFLRKWGEFFPHKELQSPPSFHGRVIPCASTEALQEYLLWRQNICHLSNQHEQCLWRLVERGMNEKEAWDFIKGFDKSDLNNLLFDEFSVNYNKVEPIFRQGSCVLKTVVEDIVKYTDNGAPIKRNRRKIITVHSKKIAGKRFWNDHTVLLKELGGFIEEINNVTPEYVRSFEFDSKLMPSTWIVVRIDGCHFHRFSEVHEFVKPNDDRALNLMNLCAVSVLEKFCEDIVFAYGVSDEYSFIVKKSSNLYQRRANKIVSAIVSLFTSTYVMRWNEFFPQSELKYPPSFDGRAVCYPSTEILRDYLSWRQVDCHINNQYNSCFWKLVASGKSKREAQNNLKGGQLQKKVEELAIDYSKLPAMFRLGSSVYRDHDNGNSFESKGEVIVEHIDIIGPTFWLEHLNILHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7APZ1</accession>
    <name>V7APZ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mannan endo-1,4-beta-mannosidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G065900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APZ1"/>
    <dbReference type="SMR" id="V7APZ1"/>
    <dbReference type="STRING" id="3885.V7APZ1"/>
    <dbReference type="Gramene" id="ESW06658">
        <property type="protein sequence ID" value="ESW06658"/>
        <property type="gene ID" value="PHAVU_010G065900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS4Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERNNVEW"/>
    <dbReference type="OrthoDB" id="1431854at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045053">
        <property type="entry name" value="MAN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31451">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31451:SF60">
        <property type="entry name" value="MANNAN ENDO-1,4-BETA-MANNOSIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755830" description="Mannan endo-1,4-beta-mannosidase" evidence="1">
        <location>
            <begin position="26"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="145" mass="16800" checksum="471661B459E30C28" modified="2014-02-19" version="1">MKLGLFLFSLVLYLILEPGIFKVEADDHDDEFVKVRGVQLVLNERPYYANGYNAYWLMYMASDPSQRNKVSSTFQVAANHGLRIGRTWAFSNGGDRLLQYSPGSYNEDMFLERNNVEWAKTEGQSLHNEDDFFTNPIVQGFYKNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQD4</accession>
    <name>V7AQD4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_010G156900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQD4"/>
    <dbReference type="STRING" id="3885.V7AQD4"/>
    <dbReference type="Gramene" id="ESW07759">
        <property type="protein sequence ID" value="ESW07759"/>
        <property type="gene ID" value="PHAVU_010G156900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1121">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MIHSNEM"/>
    <dbReference type="OrthoDB" id="2610923at2759"/>
    <dbReference type="PhylomeDB" id="V7AQD4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
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        <property type="entry name" value="hAT-like_transposase_RNase-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008906">
        <property type="entry name" value="HATC_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052035">
        <property type="entry name" value="ZnF_BED_domain_contain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481:SF10">
        <property type="entry name" value="ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481">
        <property type="entry name" value="ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05699">
        <property type="entry name" value="Dimer_Tnp_hAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14372">
        <property type="entry name" value="hAT-like_RNase-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00614">
        <property type="entry name" value="ZnF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="12">
        <location>
            <begin position="24"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="85"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="85"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW07759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="658" mass="75482" checksum="30D2B68783E46C6A" modified="2014-02-19" version="1">MELDAHVNNDVIPYSGTQPNKRMRKKSMVWDYFTVEALGAGCTRAYCNQCKKSFSYITDSKQAGTSHLKRHISLGICQVLREKNQQSSYPKTDGNQYTANPPKKRPRENSRFTGNGISFDEERCNQDVAKMVILHDYPLHIVKQQGFIDFVRILQPQFNPSCLNSVERDCVAIYLRKKQNLLNVINVIPGQVNLTLELCTSNQAMGYVFVRGHFIDNDWNLHRPILNVVTVPFPGSEDSLNQTLVTCLSDWHLEGRLFTLALDKSFSSENVIENLRDLLSVKNPTILNGQLLNQNCYARVLSRLAADALWAMRETISKVRDSVKHVNSSEPHKEKFIDLKQQLQVPSVVNLSIDDPCKWDTTYLMLVAACELKEIFICLDTTDPDYRMTLTMDDWKQVETLCTYLKYLYDAAKILTQQPYPTSNLFFAEVSKVQVELTQAAFIQDPFIRSLIFPLHENFDQYWRESCIILAIAVAMDPRHKMKLVEFTFAKTFGENAAAWIKIVEDGLRDLFIEYSTQMFLTATNDDDGDDIMIKETYQEGSIDCSLFVDGDELSDYEFYISDFTGNPQFKSELEEYLEEPLLSRAEEFDILSWWRVNGLKYPTLSRIASDILSLPVSTLSADSVFDTQIRKIDSYRSSLSSLTLEALICAKDWFQSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQX2</accession>
    <name>V7AQX2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Short-chain dehydrogenase/reductase</fullName>
            <ecNumber evidence="5">1.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G095000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQX2"/>
    <dbReference type="SMR" id="V7AQX2"/>
    <dbReference type="STRING" id="3885.V7AQX2"/>
    <dbReference type="Gramene" id="ESW07013">
        <property type="protein sequence ID" value="ESW07013"/>
        <property type="gene ID" value="PHAVU_010G095000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PQTCEMA"/>
    <dbReference type="OrthoDB" id="1933717at2759"/>
    <dbReference type="PhylomeDB" id="V7AQX2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05324">
        <property type="entry name" value="carb_red_PTCR-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000312">
        <property type="entry name" value="(+)-neomenthol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045313">
        <property type="entry name" value="CBR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490">
        <property type="entry name" value="(+)-NEOMENTHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490:SF67">
        <property type="entry name" value="NAD(P)-BINDING ROSSMANN-FOLD PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="31804" checksum="E0E61A667BB9D17A" modified="2014-02-19" version="1">MVVADAKERYAVVTGANKGIGLETVKGLASNGIKVVLTARDVKRGYQAVEELKKEFGFSGLVVFHQLDVTDPASVASLVEFVKTQFGRLDILVNNAGINGFNTDGMVPSKINWKELPQTCEMAKNCLRTNYYGAKETTEAFLPLLQLSNLPMIVNVSSEAGLLKYISNGWARRVLDDTENLSEELIDEVLKEYMKDLKEGSLENKGWPTYLSAYMVSKAAMNSYTRLLAYRHQKLCINCVCPGFVKTDINKNTGILSVENGAASVVRLALLPNGSPSGHFFTRQEVSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASW3</accession>
    <name>V7ASW3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G043700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASW3"/>
    <dbReference type="STRING" id="3885.V7ASW3"/>
    <dbReference type="Gramene" id="ESW08415">
        <property type="protein sequence ID" value="ESW08415"/>
        <property type="gene ID" value="PHAVU_009G043700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3I6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTPRYDH"/>
    <dbReference type="OrthoDB" id="1736050at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044246">
        <property type="entry name" value="ZFP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287:SF9">
        <property type="entry name" value="ZINC FINGER PROTEIN 4-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="69"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="28489" checksum="2FBCE22DA04EBB93" modified="2014-02-19" version="1">MKYCEKKSLVPHQNQGSNSNTRVLVDFMKMSKDDDIIQEQSHKKVIDSSISHSKCAVKKNTKVEKTKTFSCNYCNKEFSTSQALGGHQNAHKQERVVAKLRQGFDVKGLAQFPYYPYYSGFYNSHSLHGRSFNDALGIRSDSMIHKLPKTSRYEHSLFKRDHEKLIFDGFRNMKNDYPIIKSGATLSLKPKDDNDRINIEIQPLFTNGVVTSSSQVRKMTTLATTKIGDHYVPKETSDEPACNLDLSLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT54</accession>
    <name>V7AT54_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G051400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT54"/>
    <dbReference type="SMR" id="V7AT54"/>
    <dbReference type="STRING" id="3885.V7AT54"/>
    <dbReference type="Gramene" id="ESW08505">
        <property type="protein sequence ID" value="ESW08505"/>
        <property type="gene ID" value="PHAVU_009G051400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SHSV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GITKCVV"/>
    <dbReference type="OrthoDB" id="1920951at2759"/>
    <dbReference type="PhylomeDB" id="V7AT54"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33868">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33868:SF19">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="428"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="238"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="288"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="267"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="296"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="456" mass="50979" checksum="08E1DA853B37F694" modified="2014-02-19" version="1">MASAEGKAPYTANCFTQDFCIPLNTSGHPSPVSKKLVSDWVPCDSTNDHIHANSVCMPHDLNSDKLPEMKWWLHVKSDLGDESNYTCQHLNSYESEFGAFYAELLNGNVKRGADQLVKDFDTFSDLESANLSVEHPRHVSPRCMKNNNTRMPKFEASLNTDLHFTPKNKDQGELCFSDSRFMDSEISNFLVSEQVKMTSSDLESHLMGAEESGPWWRTAGKDELASLVARKSLEHIENCDLPHPQTNHVSQRPPYPKGVDHDKILPSSLNQSSDADGYTTGISTSDCSFQESNKHSSFSQSTDSSSSNKGCHINSENSSMSELLKALCYSQTRAREAEKAAQQAYSEKEHILSLFFRQASQLFAYKQWLNMLQLENLCLQLRNKNQSLLDLFPASLPWTPCRAMLLKKSRDKAGKRKNSNRRCGITKCVVAFAVGVGLAGAGLLLGWTMGWMFPPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU93</accession>
    <name>V7AU93_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G158800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU93"/>
    <dbReference type="STRING" id="3885.V7AU93"/>
    <dbReference type="Gramene" id="ESW07786">
        <property type="protein sequence ID" value="ESW07786"/>
        <property type="gene ID" value="PHAVU_010G158800g"/>
    </dbReference>
    <dbReference type="OMA" id="QDHIVEN"/>
    <dbReference type="OrthoDB" id="1724644at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35099:SF10">
        <property type="entry name" value="BZIP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35099">
        <property type="entry name" value="OS02G0182700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="71"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="165"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="115"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="171"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="221" mass="24721" checksum="2DBA914D8644BDDC" modified="2014-02-19" version="1">MSKLHDQWVSMAIADDTLVAHQLLLLRNHQHSSVNPWACRQRRTTRFPVSAARASPTTPLTWTAATSLDGFEGSTRHTAPMQSSEHKPVDNKSATFAEKSKSSSSKKKRTLSHLRRVEQEKKDEVKNIRDKELWLRRSLEMGQSVEQNMEAKYSASNIAPQDHIVEKQSPDSEAAPVSEAAAAATAPSNERKSGGQQPRIFLPDLNEAPVEFFTEFIGFNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7AV92</accession>
    <name>V7AV92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G052500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SINA (Seven in absentia) family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AV92"/>
    <dbReference type="SMR" id="V7AV92"/>
    <dbReference type="STRING" id="3885.V7AV92"/>
    <dbReference type="Gramene" id="ESW08518">
        <property type="protein sequence ID" value="ESW08518"/>
        <property type="gene ID" value="PHAVU_009G052500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3002">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEIHTNH"/>
    <dbReference type="OrthoDB" id="941555at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16571">
        <property type="entry name" value="RING-HC_SIAHs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03829">
        <property type="entry name" value="Sina"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000041">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000483">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.210.10:FF:000004">
        <property type="entry name" value="E3 ubiquitin-protein ligase SINAT5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.210.10">
        <property type="entry name" value="Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018121">
        <property type="entry name" value="7-in-absentia-prot_TRAF-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052088">
        <property type="entry name" value="E3_ubiquitin-ligase_SINA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049548">
        <property type="entry name" value="Sina-like_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008974">
        <property type="entry name" value="TRAF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013010">
        <property type="entry name" value="Znf_SIAH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10315">
        <property type="entry name" value="E3 UBIQUITIN PROTEIN LIGASE SIAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10315:SF80">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE SINAT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21362">
        <property type="entry name" value="Sina_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03145">
        <property type="entry name" value="Sina_TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21361">
        <property type="entry name" value="Sina_ZnF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51081">
        <property type="entry name" value="ZF_SIAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="12">
        <location>
            <begin position="62"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="SIAH-type" evidence="13">
        <location>
            <begin position="115"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="36"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW08518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="36692" checksum="F52A677E61D130A6" modified="2014-02-19" version="1">MDLESVECVSSSDGMEEDEIHTNHHHSEFSSTKPRNGGTNNVNSVGSTALAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYALGCSEIFPYYSKLKHETVCNYRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNSDAGVCMPNLCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVW8</accession>
    <name>V7AVW8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G040300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVW8"/>
    <dbReference type="STRING" id="3885.V7AVW8"/>
    <dbReference type="Gramene" id="ESW08371">
        <property type="protein sequence ID" value="ESW08371"/>
        <property type="gene ID" value="PHAVU_009G040300g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="349at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009579">
        <property type="term" value="C:thylakoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1130.10">
        <property type="entry name" value="Photosystem I PsaA/PsaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001280">
        <property type="entry name" value="PSI_PsaA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036408">
        <property type="entry name" value="PSI_PsaA/B_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00223">
        <property type="entry name" value="PsaA_PsaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81558">
        <property type="entry name" value="Photosystem I subunits PsaA/PsaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="67" mass="7586" checksum="34B498DE7D2620AA" modified="2014-02-19" version="1" fragment="single">TLSLFFFCGTSAYDRVKCFNYETWLSDPTHIKLNAQVVWPIVGQDILNGDIGESSLLNKRDSYGPNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW34</accession>
    <name>V7AW34_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G1337001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW34"/>
    <dbReference type="STRING" id="3885.V7AW34"/>
    <dbReference type="Gramene" id="ESW09510">
        <property type="protein sequence ID" value="ESW09510"/>
        <property type="gene ID" value="PHAVU_009G1337001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNFASVP"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000356">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050560">
        <property type="entry name" value="MYB_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614:SF221">
        <property type="entry name" value="MYB DOMAIN PROTEIN 110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614">
        <property type="entry name" value="MYB PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="4">
        <location>
            <begin position="12"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="3">
        <location>
            <begin position="12"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW09510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="281" mass="32170" checksum="F5F7DF2EAD01502C" modified="2014-02-19" version="1" fragment="single">KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNDSNTFLEKRTPQSHQDLLFSTRFGLENGRFFDFRSLDNNKDNNNNNNRIVADTTPSSSLASWNFASVPTTTNGSAVVDRKGGRDYFNGSSCSSSVYLSECSRSSDRSFLRIYPNPAFSLPNYKRVVPTSPFSFLGSDNDGRIKRDLLMSFCDNNSSTFTKLKASTEKDHQQQTTEDETIIEPKEVPFIDFLGVGVSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWE5</accession>
    <name>V7AWE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Trehalose 6-phosphate phosphatase</fullName>
            <ecNumber evidence="8">3.1.3.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G054400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23420"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16551"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58429"/>
            <dbReference type="EC" id="3.1.3.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Glycan biosynthesis; trehalose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the trehalose phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.12" evidence="8"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWE5"/>
    <dbReference type="SMR" id="V7AWE5"/>
    <dbReference type="STRING" id="3885.V7AWE5"/>
    <dbReference type="Gramene" id="ESW08546">
        <property type="protein sequence ID" value="ESW08546"/>
        <property type="gene ID" value="PHAVU_009G054400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1050">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNKGLAA"/>
    <dbReference type="OrthoDB" id="411251at2759"/>
    <dbReference type="UniPathway" id="UPA00299"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004805">
        <property type="term" value="F:trehalose-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01627">
        <property type="entry name" value="HAD_TPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000175">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044651">
        <property type="entry name" value="OTSB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00685">
        <property type="entry name" value="T6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768:SF24">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="41945" checksum="BA2FE87C49E859DD" modified="2014-02-19" version="1">MNYIFLLLVTLKIFKRKLTQLQEIMGFQTSHTTKWMSQPIFKAKEDPIDVHENSLIQRTALNLIDHSETNTNYILSGYDSWVTRHPSALKSFERLMKAAIGKRIIIFLDYDGTLSPIVNDPERAFMSDEMRAAVCEVATYFPTAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVTSSAGEHIDIAINKSGTEVPFQPAKKYLPAIREILRILKIEVKEIKGAMIEDNGFCISVHFRQVQDEDYDLLEMKVKSVLENHPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCNDILPVYIGDDRTDEDAFKVIQSREQGYPIIVSSIPRETKALYSLRDPSEVLIFLSRLAKWRKTAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX22</accession>
    <name>V7AX22_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G188200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX22"/>
    <dbReference type="Gramene" id="ESW10187">
        <property type="protein sequence ID" value="ESW10187"/>
        <property type="gene ID" value="PHAVU_009G188200g"/>
    </dbReference>
    <dbReference type="OMA" id="EMEFAQP"/>
    <dbReference type="OrthoDB" id="1931098at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47075">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47075:SF9">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="89"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="129" mass="14259" checksum="D623892575C1CA09" modified="2014-02-19" version="1">MEKNEMVEENCVLKTQIEKLEGEIKARVAQRGPNLMNVASEMEFAQPEKMRKFPGESLQLSTTESTVQQGHAVLVVPLSNHHGKGALSAHNIAENTSKPTSTISKPHARYPTPMDSWPLQLLAEQPTSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7B005</accession>
    <name>V7B005_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flowering-promoting factor 1-like protein 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G247200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FPF1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B005"/>
    <dbReference type="STRING" id="3885.V7B005"/>
    <dbReference type="Gramene" id="ESW10895">
        <property type="protein sequence ID" value="ESW10895"/>
        <property type="gene ID" value="PHAVU_009G247200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S12G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DENPYNQ"/>
    <dbReference type="OrthoDB" id="612242at2759"/>
    <dbReference type="PhylomeDB" id="V7B005"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009909">
        <property type="term" value="P:regulation of flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039274">
        <property type="entry name" value="FPF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33433">
        <property type="entry name" value="FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="100" mass="11907" checksum="700614C8570B287E" modified="2014-02-19" version="1">MSGVWVFNKGVVRLVESPNSERKVLVHSTSNEIITSYTVLEHKLSSLGWERYYDDPDLLQFHKRSTVHLISLPRDFNRFKSMHMYDIVVKNKNYFEVRDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1J9</accession>
    <name>V7B1J9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G050400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1J9"/>
    <dbReference type="STRING" id="3885.V7B1J9"/>
    <dbReference type="Gramene" id="ESW11679">
        <property type="protein sequence ID" value="ESW11679"/>
        <property type="gene ID" value="PHAVU_008G050400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPSMHIY"/>
    <dbReference type="OrthoDB" id="1696354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044240">
        <property type="entry name" value="STR4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47377">
        <property type="entry name" value="RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47377:SF3">
        <property type="entry name" value="RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="258"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="260"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="324"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="336" mass="37520" checksum="AF8CD223D20D475A" modified="2014-02-19" version="1">MDSLSLLLSPYPLSRKPHKLKTFKSFSNFSTHNPEHSTIQPFQPHSLQIPSSNALAKPFFSFTLFNLFTPFPCLADVAVDDGKINIESVVVSIDGFFNRYPFFVAGCAFIWLVAIPLAEEYFKKCKFVSAIDAFRRLRDDPSSKLLDIRDEKSVRFMRSPNLKFIEKEVVHVEFTDGGNEDEFVKKVLGRFKDASNTALCVLDSFDDNSMKVAELLFKNGFKEAYAIKGGVRGEQGWMAIQDSLLPPSVHIRKRVKSSKELNTNGNGRIQQNDSKNKSSLSQEISPVENQKVDNGNVKSSAESIPEVKTGAVVSSSPYPNYPDLKPPSSPTPSKPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B259</accession>
    <name>V7B259_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G046400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B259"/>
    <dbReference type="SMR" id="V7B259"/>
    <dbReference type="STRING" id="3885.V7B259"/>
    <dbReference type="Gramene" id="ESW11630">
        <property type="protein sequence ID" value="ESW11630"/>
        <property type="gene ID" value="PHAVU_008G046400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SNVR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENRENQP"/>
    <dbReference type="OrthoDB" id="552345at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF274">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="77"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="151"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="160"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23171" checksum="ABDC7DBC34BF6720" modified="2014-02-19" version="1">MSSTTTDSDFAFLESVRQYLLGHDSINLMPATTHQVASHDPLSNPKCNGDLENVIFRSEDATAAVARHVHAPQTWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTFDTEKKAALAYDKAAFKMRGQKAKLNFPHLIDSDNCDTVSEPVMETASERELSQSFQPSSPSSLCSDDSSESQGTKRRKKNLTDLLNKLAKNRSQAKVSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B335</accession>
    <name>V7B335_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pentatricopeptide repeat-containing protein-mitochondrial domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G101200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B335"/>
    <dbReference type="SMR" id="V7B335"/>
    <dbReference type="Gramene" id="ESW12302">
        <property type="protein sequence ID" value="ESW12302"/>
        <property type="gene ID" value="PHAVU_008G101200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLMFKNC"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7B335"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057027">
        <property type="entry name" value="TPR_mt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF28">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23276">
        <property type="entry name" value="TPR_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="191"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="226"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="261"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="Pentatricopeptide repeat-containing protein-mitochondrial" evidence="4">
        <location>
            <begin position="281"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="296"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="400"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="435"/>
            <end position="469"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW12302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="58868" checksum="135C40755785EE1D" modified="2014-02-19" version="1">MFQSTLSRISPRRHHPFSTAVAAAIAANSVPASGLPPSSFKIRPPVHPWPRRLTPNNLSSLISRQHDPDLSLQIFHHAQSLHPSISHAPQSLHALFLKLSRARRFSLLESLLTRLPNPPPEPSLVILIRSYGLAGKPLSAVRLFLKFQSLRVQPSIKSLNALLNALVQNKRYRLAHSLFKSSAEKFRVVPNVVSCNILLKALCKSNEVDVAVRVLDQMGLMGLVPNVVSFTTVLGGYVFRGDMESAMRVFGEILDRGWVPDATTYTVLMSGFCRMGNLVEAIRVMDLMEENRVQPSEVTYGVMIEAYCKGRKSGEAMNLLEDMISKGFMPNSVLCCRVVDVLCEEGSVERAWEMCRGVVRKGIRVGGAVVSTIVHWLCKEGKVVEAREVLDELEKGEVASLLTYNTLIVGMCERGELCEAARLWDEMVEKGRAPNAFTYNVLIKGFCKVGDVKEGIRVLEEMVENGCLPNKSTYSILVDGISVSGGKKEEIEKVVLLAMTTGVDGGLWGIFLKLVGNLDGNAAMLDRILTENVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B498</accession>
    <name>V7B498_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Embryo defective 2752 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G136200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B498"/>
    <dbReference type="STRING" id="3885.V7B498"/>
    <dbReference type="Gramene" id="ESW12717">
        <property type="protein sequence ID" value="ESW12717"/>
        <property type="gene ID" value="PHAVU_008G136200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3142">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEEHHGK"/>
    <dbReference type="OrthoDB" id="2016662at2759"/>
    <dbReference type="PhylomeDB" id="V7B498"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037759">
        <property type="entry name" value="At4g29660-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37898">
        <property type="entry name" value="OS05G0540200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37898:SF1">
        <property type="entry name" value="OS05G0540200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="96" mass="11581" checksum="E6A85043CE8AF4AD" modified="2014-02-19" version="1">MASYLWRKYADYLYTKWEKTFLWDMVEPYRRPKSFTPLVTIYIAAFYSGVIGAAITEQLHKEKYWEEHHGKAVPLMRPKFYWGPWRIMGGDVPKLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4P7</accession>
    <name>V7B4P7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RINT1-like protein MAG2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G122500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4P7"/>
    <dbReference type="SMR" id="V7B4P7"/>
    <dbReference type="STRING" id="3885.V7B4P7"/>
    <dbReference type="Gramene" id="ESW12550">
        <property type="protein sequence ID" value="ESW12550"/>
        <property type="gene ID" value="PHAVU_008G122500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2218">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FRTGWVE"/>
    <dbReference type="OrthoDB" id="2189254at2759"/>
    <dbReference type="PhylomeDB" id="V7B4P7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070939">
        <property type="term" value="C:Dsl1/NZR complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060628">
        <property type="term" value="P:regulation of ER to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006890">
        <property type="term" value="P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.670">
        <property type="entry name" value="Dsl1p vesicle tethering complex, Tip20p subunit, domain D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042044">
        <property type="entry name" value="EXOC6PINT-1/Sec15/Tip20_C_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007528">
        <property type="entry name" value="RINT1_Tip20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13520">
        <property type="entry name" value="RAD50-INTERACTING PROTEIN 1 RINT-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13520:SF1">
        <property type="entry name" value="RINT1-LIKE PROTEIN MAG2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04437">
        <property type="entry name" value="RINT1_TIP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51386">
        <property type="entry name" value="RINT1_TIP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="798" mass="90326" checksum="58D8D43293A2CEF0" modified="2014-02-19" version="1">MESLQTLPPSSHLSPAALSFLDHRFRTECALADAPSFVSELQTQCAELDRALDELTRRLGAGLAAYASFSGEIHGLFGHVTDRLTALSSTVVPDEGRGEGDGKGFKEELATLAKEVARLETVRVYAETALKLDTLVGDIEDAVSYTMNKSMRKQSASQNSQEMHMLAIKTLKTTEGILTSITKAHPQWKHLVSAVDHRVDRALAILRPQAISEHRALLTSLGWPPPLSSFTSSNSDARTVNQVSNPLLSMQADLKLRYSENFFALCNLQELQRKRKARQLEGHDREVALRQPLWVIEELVNPLSLASQRHFSKWIDKPEFIFTLVYKITRDFVDSMDELLQPLVDEAMLFGYSCREEWISAMVTSLTTYMAKEIFPSYISQLDEESATGTQSSARISWLHLIDLMIAFDKRIKSLIENSGVLLSFDDDDIMQKISSLSIFCDRPDWLNLWAEIELEDALDKLKPDIQNENYWIKKVEGAVISSCTDDYKSPLVSNSFLRHLASVIDRCRSLPRVSLRSKFLRLAGLPIIRNFFDSILIRCQEAEGLTALTDDDAVLKVTISVNAAHYFESVLKEWSEDVFFLEMGMDGDDEAGMESNANIYREGLPESSRRVIFDDEIKKLEEFRTEWVEKISLVILRGFDSHSRDYVKNKKQWQRGEEGWTVSKALVEALNYLQSKTSVVEVGLNGRDFVGVWRNLAAGIDRLIFNGILMSNVKFHRSGIDRFGSDLDVLFGVFGSWCLRPEGFFPKTSEGQKLLKLDENRVQECKAGGKKWLKENGFRHLSVTEAEKILKNRVFTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B560</accession>
    <name>V7B560_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CASP-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G155100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3 8">Homodimer and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Cell membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the Casparian strip membrane proteins (CASP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B560"/>
    <dbReference type="STRING" id="3885.V7B560"/>
    <dbReference type="Gramene" id="ESW12949">
        <property type="protein sequence ID" value="ESW12949"/>
        <property type="gene ID" value="PHAVU_008G155100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW75">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFTFALD"/>
    <dbReference type="OrthoDB" id="672180at2759"/>
    <dbReference type="PhylomeDB" id="V7B560"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006702">
        <property type="entry name" value="CASP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573:SF38">
        <property type="entry name" value="CASP-LIKE PROTEIN 4A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573">
        <property type="entry name" value="CASP-LIKE PROTEIN 4A4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04535">
        <property type="entry name" value="CASP_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="209"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="243"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="284"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="Casparian strip membrane protein" evidence="10">
        <location>
            <begin position="166"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="39"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="64"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW12949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="34820" checksum="2A5238DC61E0121A" modified="2014-02-19" version="1">MKKENSEEKATEPTEKDSGDTQEDQEPERNKNEDNQFYSVSEPSPSITLSSPSLRTRKSPSPPLHSLSESPISDVHSSPQPQKPPPDSSSDSSISDGHFSIAEQRPSPLVLTTHRFQVESAVVTKVDLGAEDGFVKDVEQATGATGNRRLRPDVSGLLKSKKIGTLSKLLLGLRIFALVFCLASFSVLAADKNRGWALDSFYLYKEFRYSLSVNVIGFLHSGLQICDLWRYLNTGKHVVDHQLRGYFTFALDQILTYLLMSASSSAATRTYDWESNWGEDKFPYMANASVALSLVAFVAFALASLVSGSILVRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5U8</accession>
    <name>V7B5U8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">monodehydroascorbate reductase (NADH)</fullName>
            <ecNumber evidence="8">1.6.5.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G155600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FAD-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.4" evidence="8"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5U8"/>
    <dbReference type="SMR" id="V7B5U8"/>
    <dbReference type="STRING" id="3885.V7B5U8"/>
    <dbReference type="Gramene" id="ESW12955">
        <property type="protein sequence ID" value="ESW12955"/>
        <property type="gene ID" value="PHAVU_008G155600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1336">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EEHCMAR"/>
    <dbReference type="OrthoDB" id="432169at2759"/>
    <dbReference type="PhylomeDB" id="V7B5U8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016656">
        <property type="term" value="F:monodehydroascorbate reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050446">
        <property type="entry name" value="FAD-oxidoreductase/Apoptosis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048618">
        <property type="entry name" value="MDHAR3-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43557">
        <property type="entry name" value="APOPTOSIS-INDUCING FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43557:SF2">
        <property type="entry name" value="RIESKE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21791">
        <property type="entry name" value="MDHAR3-like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00411">
        <property type="entry name" value="PNDRDTASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="FAD/NAD-linked reductases, dimerisation (C-terminal) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="449"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="10">
        <location>
            <begin position="7"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="Monodehydroascorbate reductase 3-like C-terminal" evidence="11">
        <location>
            <begin position="340"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF21791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW12955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="478" mass="52064" checksum="98B7918247B5DCF4" modified="2014-02-19" version="1">MGRAFVYVILGGGVAAGYAALEFVKKGVSYGELCIISDEPVAPYERPALSKGFLLPEAAARLPSFHTCVGANEERLTPKWYKEHGIELVLGTGVKSADVKRKTLLTTTGETISYKFLIVATGARALKLEEFGVSGSDAENVCYLRDIADANRLVNVIQSCPEGNAVVIGGGYIGMECAASLVINKINVTMVFPEEHCMARLFTTKIANYYEEYYKSRGVNFVKGTVMSSFDFDSNGKVTAVNLRDGSTLSVEMVVVGIGIRPNTGLFEGQLTLEKGGIKVNGMLQSSNSSVYAIGDVAAFPVKAFGETRRLEHVDSARKSAKHVVAAIMEPDKTGEFDYLPFFYSRIFTLSWQFYGDNVGEVIYYGDMSGSAFGAYWVSKGHLVGAFLEGGNREEYEAIAKVTRLRPAIEDLTELERQGLGYAVTVSQKPVASPAVEVRASDLLLEKPLYAWHATAGVIIAASIAAFAYFYGKKRRRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7Y5</accession>
    <name>V7B7Y5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G2448001g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7Y5"/>
    <dbReference type="Gramene" id="ESW14002">
        <property type="protein sequence ID" value="ESW14002"/>
        <property type="gene ID" value="PHAVU_008G2448001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS0B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VREANMA"/>
    <dbReference type="OrthoDB" id="1433401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF62">
        <property type="entry name" value="OS05G0423500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="5">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="162"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="164"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW14002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="185" mass="20438" checksum="692194966BD1E4C9" modified="2014-02-19" version="1" fragment="single">ASNILLDSRYTAKVADFGLSRLAPVPDIEGNVPAHLSTVVKGTPGYLDPEYFLTRNLTHKSDVYSLGVVFLKLLTGRPPIFHGENIIRQVNMAYQYGGISLVVDKRIESYPFEYAVRFFTLALKCCKDLPNERPKMTEVARELEYICSMLLEPDSKGVEYVTNDSSGDVSGSDLVSGSVPTIKPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC65</accession>
    <name>V7BC65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Tudor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G0481001g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC65"/>
    <dbReference type="Gramene" id="ESW15145">
        <property type="protein sequence ID" value="ESW15145"/>
        <property type="gene ID" value="PHAVU_007G0481001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFEPGRN"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000107">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002999">
        <property type="entry name" value="Tudor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047:SF51">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50304">
        <property type="entry name" value="TUDOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Tudor" evidence="5">
        <location>
            <begin position="172"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="388" mass="43516" checksum="A98DCFB64800AB9B" modified="2014-02-19" version="1" fragment="single">TAAAVIDLPFPSSVPEIPVGVESTDKLPSTSLFHAFATSTSLIKPHFELALQLLPPVSFMVSDIFLWWTLDSASKFGFHRFVFDGMSNYSHALIQEAFRIGLLSGPLHPEELVPLTRFPGIRVSKNDFDPAFQDKDPHSLFNVFLNKVHTAIFYELEPVFVDYMNAEIPLRSWCVGPLCLACPEKKTPEKSVWVQWLDHRLEEKRSVLYVAFGSQAEVSSEQLVEIAKGLEQSTVNFMWVLKGDEQELPSGFEERVKGRGMLVREWVDQREILMHESVEGFVSHCGWKSVLESVCAGVPILAWPLCAEQFENARMVEEEIKVGLRVETSDGSVRGFVKGEALRKTVRAVMEGEEGKEVRRKVMKLGEMAHKALEEGGSSQSSLDFPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCW2</accession>
    <name>V7BCW2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_007G071400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCW2"/>
    <dbReference type="SMR" id="V7BCW2"/>
    <dbReference type="STRING" id="3885.V7BCW2"/>
    <dbReference type="Gramene" id="ESW15420">
        <property type="protein sequence ID" value="ESW15420"/>
        <property type="gene ID" value="PHAVU_007G071400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DKWERYA"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="PhylomeDB" id="V7BCW2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050665">
        <property type="entry name" value="Cytochrome_P450_Monooxygen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24282:SF149">
        <property type="entry name" value="CYTOCHROME P450 FAMILY 72 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24282">
        <property type="entry name" value="CYTOCHROME P450 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 11 12" id="KW-0349">Heme</keyword>
    <keyword evidence="8 11 12" id="KW-0408">Iron</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 12" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="7 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="11">
        <location>
            <position position="465"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW15420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="520" mass="59132" checksum="0C604546BB343A7D" modified="2014-02-19" version="1">MEFVGLCGVLVAFYVLLCLFFFFILTFSWWVFPNQKLKMLKKCGLGGPTPSFPLGNIEEMKKNSIIQSSVVSSNLSHDIHSSVFPYFSSWQKSYGKVFVYWLGTEPFLYIAEAEFLKKMSTVVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRQRHIVAPAFNPINLKGMANMMVESTNQMIDRWVTQINSFNPEIDVESEIVATAGEIIARTSFGMKDDNARDAIVKLRALQMTLFKSNRYVGVPFGKYFNVKKTLEANKLGKELDELLLSIIEARKNSPTKNSQQDLLGLLLKANNQVDGRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHQDWQDQLRDEIREVVGGGDKLDITLLSGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPHYKHSPSIMLSLRPTHGLPLIVQPLQKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD12</accession>
    <name>V7BD12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G094400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD12"/>
    <dbReference type="SMR" id="V7BD12"/>
    <dbReference type="STRING" id="3885.V7BD12"/>
    <dbReference type="Gramene" id="ESW15694">
        <property type="protein sequence ID" value="ESW15694"/>
        <property type="gene ID" value="PHAVU_007G094400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1455">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGDMLEW"/>
    <dbReference type="OrthoDB" id="2498029at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000132">
        <property type="entry name" value="caffeoylshikimate esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051044">
        <property type="entry name" value="MAG_DAG_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11614">
        <property type="entry name" value="PHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="1">
        <location>
            <begin position="58"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="36022" checksum="D740E4BB908162B6" modified="2014-02-19" version="1">MVHPIAEANEESPFGTLTPDDFYARHSVNHASEFITNPRGLKLFTQWWLPLPPTTIVGTLAVVHGFTGESSWLIQLTAVHFAKAGFATCAIDHQGHGFSDGLIAHIPDINPVVDDCISFFESFRSRFDPSLPSFLYSESLGGAIALLITLRRGKKPWNGVILNGAMCGISAKFKPPWPLEHFLSIAAAVIPTWRVVPTRGSIPDVSFKVEWKRKLALASPRRTVARPRAATAQELMRICRELQERYEEVEVPLLVAHGGDDVVCDPACVEELYARAASKDKTLKIYPGMWHQMIGEPEENVELVFGDMLEWLSSRAQRATVHGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEY1</accession>
    <name>V7BEY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_007G151700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEY1"/>
    <dbReference type="STRING" id="3885.V7BEY1"/>
    <dbReference type="Gramene" id="ESW16377">
        <property type="protein sequence ID" value="ESW16377"/>
        <property type="gene ID" value="PHAVU_007G151700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRVFRCK"/>
    <dbReference type="OrthoDB" id="6077919at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR26374">
        <property type="entry name" value="ZINC FINGER PROTEIN ZAT5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR26374:SF456">
        <property type="entry name" value="ZINC FINGER PROTEIN ZAT5-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="11">
        <location>
            <begin position="102"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="11">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="116"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW16377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="264" mass="29040" checksum="EFB1058723DE8D96" modified="2014-02-19" version="1">MQTQEELQEVSKDQTMIKGKRNKRERAPSPPRFAKPTSTSTSTNNSIDSATTSTTTNTPIESIEEEDMVNCLILLAQGTHHVAAATPDQNINYKRSTNPRVFRCKTCNKCFPSFQSLGGHRTSHRKPKENSTSVEEAPTFVRDSDPTTSTTLSLKTPNRVNSLTSTSTVAVRVHRCSTCYAEFSSGQALGGHMRRHRNLVNASSMTSMSGDGGGSQEYQGAKKPLNLDLNLPAAPEEDQGESKFSFQQRENVIVFSNSLVNCNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BF04</accession>
    <name>V7BF04_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G156700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BF04"/>
    <dbReference type="Gramene" id="ESW16439">
        <property type="protein sequence ID" value="ESW16439"/>
        <property type="gene ID" value="PHAVU_007G156700g"/>
    </dbReference>
    <dbReference type="OMA" id="WCIMVIL"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34463">
        <property type="entry name" value="GLYCINE-RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34463:SF11">
        <property type="entry name" value="GLYCINE-RICH PROTEIN LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756644" evidence="2">
        <location>
            <begin position="19"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="98" mass="9136" checksum="53CC0A25C915E849" modified="2014-02-19" version="1">MAKWCILLLLALAVVASARTIPSDATFGDQKNFLGYGFSGVGNNGLPFGGIGSGFDGGMGGPAGGLGGFGGPGGPGGPGGLGGLGVPGIGEGPSFSLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH43</accession>
    <name>V7BH43_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G189500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH43"/>
    <dbReference type="SMR" id="V7BH43"/>
    <dbReference type="STRING" id="3885.V7BH43"/>
    <dbReference type="Gramene" id="ESW16845">
        <property type="protein sequence ID" value="ESW16845"/>
        <property type="gene ID" value="PHAVU_007G189500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4111">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WISGTTF"/>
    <dbReference type="OrthoDB" id="10016939at2759"/>
    <dbReference type="PhylomeDB" id="V7BH43"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd22884">
        <property type="entry name" value="TOM22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017411">
        <property type="entry name" value="Tom22_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46867">
        <property type="entry name" value="MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46867:SF4">
        <property type="entry name" value="MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038151">
        <property type="entry name" value="TOM9-2_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="56"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="98" mass="10329" checksum="2D24CCCAB658B8CA" modified="2014-02-19" version="1">MASQGRRGGVSLPDRPSNSSSVLAKISRSSIVVRGKEAAGDAAFVAKKLLRSTGKAAWIAGTTFLVLVVPLIVEMDREQQLNDLELQQASLLGTPAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJS6</accession>
    <name>V7BJS6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HAT C-terminal dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G0250001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJS6"/>
    <dbReference type="STRING" id="3885.V7BJS6"/>
    <dbReference type="eggNOG" id="ENOG502SWIQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1432818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="136" mass="15612" checksum="32FF556F54EF0719" modified="2014-02-19" version="1" fragment="single">LSLTCSSSGCERNWSAFERVHTKKRNRLYQMTMNDVVFVMTNSRLTKKKDVRKTKEYTVDDLSSDDEWTVEENETLHGLDEEILLEVGASKGATIEVPPIDDDNDLEVPPIDDNENEDFLEDEDDYPMMNANDFVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK17</accession>
    <name>V7BK17_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G235500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK17"/>
    <dbReference type="Gramene" id="ESW17390">
        <property type="protein sequence ID" value="ESW17390"/>
        <property type="gene ID" value="PHAVU_007G235500g"/>
    </dbReference>
    <dbReference type="OMA" id="MILCISE"/>
    <dbReference type="OrthoDB" id="1414876at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006527">
        <property type="entry name" value="F-box-assoc_dom_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017451">
        <property type="entry name" value="F-box-assoc_interact_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050796">
        <property type="entry name" value="SCF_F-box_component"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01640">
        <property type="entry name" value="F_box_assoc_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672">
        <property type="entry name" value="BNACNNG10540D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672:SF13">
        <property type="entry name" value="F-BOX PROTEIN CPR30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07734">
        <property type="entry name" value="FBA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="11"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="312" mass="36077" checksum="38B2D798923D622F" modified="2014-02-19" version="1">MSSSSQCCAVFPEELMIEILSRVSVKDLMRYRCISKWMNHLVLDLYFKIHHPLIILIVLGVCNGLVCLQDSHYVDDCEDFWVRFWNPSTRLMSEDSPCVRFPSDDSFIFGFGFGYDDWSDTYQVVFLDNKSEKMEVSVHSLGDSCWRNVLSCDALETLSLYGVYVCGTINWLALPKSESGFDYGWRDVTMNEIKILSYDVKNEKCNYLSMPDFHCEVPHDEPVIQVFKGCLCLSHRQGTQLFVCTMREFGVAKSWTPLLNINYEDLDIHVLHGMPTIPMILCISENDDVLLLGSYNSAEFFLYNKKDNRIDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK20</accession>
    <name>V7BK20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HR-like lesion-inducer</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G194800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK20"/>
    <dbReference type="Gramene" id="ESW16916">
        <property type="protein sequence ID" value="ESW16916"/>
        <property type="gene ID" value="PHAVU_007G194800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXPQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REFNEFG"/>
    <dbReference type="OrthoDB" id="529675at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008637">
        <property type="entry name" value="HR_lesion"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31474">
        <property type="entry name" value="HR-LIKE LESION-INDUCER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31474:SF9">
        <property type="entry name" value="HR-LIKE LESION-INDUCING PROTEIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05514">
        <property type="entry name" value="HR_lesion"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756817" description="HR-like lesion-inducer" evidence="2">
        <location>
            <begin position="23"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="156" mass="17432" checksum="87483A3A03CA2602" modified="2014-02-19" version="1">MAFASFLGRVLFASVFILSAYQEFNEFGADGGPAAKALRPKFDAFTHRVHSQVGFQLPQIDTKLLIAGAIALKGLGGVIFIFGSSFGALLLLLHQLIATPIHYDFYNYESEDKEFTQLFIKFTQNMALFGALLFFIGMKNSIPKRQHKKTPKTKTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKM3</accession>
    <name>V7BKM3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G251300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKM3"/>
    <dbReference type="SMR" id="V7BKM3"/>
    <dbReference type="STRING" id="3885.V7BKM3"/>
    <dbReference type="Gramene" id="ESW17583">
        <property type="protein sequence ID" value="ESW17583"/>
        <property type="gene ID" value="PHAVU_007G251300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEKHADI"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050404">
        <property type="term" value="F:zeatin O-beta-D-xylosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009690">
        <property type="term" value="P:cytokinin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000060">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000238">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058980">
        <property type="entry name" value="Glyco_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48044">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48044:SF27">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26168">
        <property type="entry name" value="Glyco_transf_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycosyltransferase N-terminal" evidence="6">
        <location>
            <begin position="13"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF26168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="467" mass="52819" checksum="C8A2E5E203A46A78" modified="2014-02-19" version="1">MGFNGDNVLHQTQVVVVLVPFPAQGHLNQLMHLSHLISPHNIPVHYVSTVTHIRQATLRHHKSTSTIHFHAFQVPPFVSPPPNPHNAETDFPSHLIPSFEASSHLREPVGKLLQSLSSQAKRVVVIHDSLMGPVVQDAANMPNVERYTFQSTSAFFTFVYFWEQMGKPSLQGFRVPEFPSLEESLPAEFIEYISENFEFNKFNDGHIYNTSRAFEGPYLELLENMKGTKKVWALGPFNPLAFEKKDSVGFRHSCMEWLDKQEASSVIYISFGTTTALRDEQIQEIATGLEQSKQKFIWVLRDADKGDIFDGSETKRYELPKGFEKRVDGMGLVVRDWAPQLEILSHSATGGFMSHCGWNSCLESITMGVPMATWPMHSDQPRNAVLVTEILKVGLVVKDWEQRNSLVSASVIENGVRRLMESKEGDEMRKRSMRLKNGIHRSMDEGGISPKEMDSFIAHITTESLIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKP4</accession>
    <name>V7BKP4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">1-acylglycerol-3-phosphate O-acyltransferase</fullName>
            <ecNumber evidence="5">2.3.1.51</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G255300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 1-acyl-sn-glycero-3-phosphate + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphate + CoA</text>
            <dbReference type="Rhea" id="RHEA:19709"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57970"/>
            <dbReference type="ChEBI" id="CHEBI:58342"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="EC" id="2.3.1.51"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Phospholipid metabolism; CDP-diacylglycerol biosynthesis; CDP-diacylglycerol from sn-glycerol 3-phosphate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.51" evidence="5"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKP4"/>
    <dbReference type="STRING" id="3885.V7BKP4"/>
    <dbReference type="Gramene" id="ESW17625">
        <property type="protein sequence ID" value="ESW17625"/>
        <property type="gene ID" value="PHAVU_007G255300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1505">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAGWMIC"/>
    <dbReference type="OrthoDB" id="189226at2759"/>
    <dbReference type="PhylomeDB" id="V7BKP4"/>
    <dbReference type="UniPathway" id="UPA00557">
        <property type="reaction ID" value="UER00613"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003841">
        <property type="term" value="F:1-acylglycerol-3-phosphate O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016024">
        <property type="term" value="P:CDP-diacylglycerol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07990">
        <property type="entry name" value="LPLAT_LCLAT1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032098">
        <property type="entry name" value="Acyltransf_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983">
        <property type="entry name" value="1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10983:SF24">
        <property type="entry name" value="1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 3, ISOFORM E-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16076">
        <property type="entry name" value="Acyltransf_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69593">
        <property type="entry name" value="Glycerol-3-phosphate (1)-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="Phospholipid/glycerol acyltransferase" evidence="10">
        <location>
            <begin position="83"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="358"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="370"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW17625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="383" mass="43148" checksum="EEF73FC59F4B0482" modified="2014-02-19" version="1">MTAAVVVPLGLLFFSSGLIVNLIQALCYVFVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDSETFRSMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSVVHVHIKRHLMKDLPEENEAVAQWCRDIFVAKDALFDKHIAEDTFSDQELQDTGRPIKSLVVVLSWACVVVTGALKFLQWSSLLSSWKGVAFSAIGLGVVTLLMHILIQFSQAERSTPSKVAPAKSRNREELEARDNKQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLQ2</accession>
    <name>V7BLQ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G246000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLQ2"/>
    <dbReference type="STRING" id="3885.V7BLQ2"/>
    <dbReference type="Gramene" id="ESW17521">
        <property type="protein sequence ID" value="ESW17521"/>
        <property type="gene ID" value="PHAVU_007G246000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1015">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="3340520at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010775">
        <property type="entry name" value="DUF1365"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33973">
        <property type="entry name" value="OS07G0153300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33973:SF4">
        <property type="entry name" value="OS07G0153300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW17521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="150" mass="17262" checksum="9213C4E32C452E18" modified="2014-02-19" version="1">MHGSWNIKASDPGENLTISISVHHPKHGNYFTATLKAKKLRSSPELDHAIFFWLMPHKVAVWIYWHLTKEAKDYAKEDIVENFLVDDSSSDENSDYNVLAGEKIGFANDLLQRKDGNGYFLKGWWNDLLHGKIYKEIDHSGKMVLLLNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLV5</accession>
    <name>V7BLV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">beta-glucosidase</fullName>
            <ecNumber evidence="3">3.2.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G250300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.</text>
            <dbReference type="EC" id="3.2.1.21"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 3 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.21" evidence="3"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLV5"/>
    <dbReference type="SMR" id="V7BLV5"/>
    <dbReference type="STRING" id="3885.V7BLV5"/>
    <dbReference type="Gramene" id="ESW17571">
        <property type="protein sequence ID" value="ESW17571"/>
        <property type="gene ID" value="PHAVU_007G250300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ55">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGNAMVM"/>
    <dbReference type="OrthoDB" id="47059at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009251">
        <property type="term" value="P:glucan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.300:FF:000003">
        <property type="entry name" value="Beta-D-glucan exohydrolase isoenzyme ExoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1700:FF:000002">
        <property type="entry name" value="Glycosyl hydrolase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1700">
        <property type="entry name" value="Glycoside hydrolase family 3 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="entry name" value="Glycoside hydrolase, family 3, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051915">
        <property type="entry name" value="Cellulose_Degrad_GH3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002772">
        <property type="entry name" value="Glyco_hydro_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036881">
        <property type="entry name" value="Glyco_hydro_3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30620:SF16">
        <property type="entry name" value="LYSOSOMAL BETA GLUCOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30620">
        <property type="entry name" value="PERIPLASMIC BETA-GLUCOSIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01915">
        <property type="entry name" value="Glyco_hydro_3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00133">
        <property type="entry name" value="GLHYDRLASE3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52279">
        <property type="entry name" value="Beta-D-glucan exohydrolase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754675" description="beta-glucosidase" evidence="7">
        <location>
            <begin position="24"/>
            <end position="627"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 3 N-terminal" evidence="8">
        <location>
            <begin position="48"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 3 C-terminal" evidence="9">
        <location>
            <begin position="412"/>
            <end position="621"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="627" mass="68993" checksum="476FD523D7505C78" modified="2014-02-19" version="1">MGRYSLPFVGVLLLFCLVSSSEAEYLKYKDPKVQLNVRISDLMKRMSLEEKIGQMTQIEREVATPDVLKKYFIGSVLSGGGSVPAPKASAETWQKMVTEMQKAALSTRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGVTRDPVLIKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVRNMTEIIPGLQGDIPANSVKGVPFVAGKNKVAACAKHYVGDGGTNKGINENNTLISYNGLLGIHMPAYYNSIIKGVSTVMISYSSWNGVKMHANRKLITDYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVQAGVSAGIDMIMVPFNYTEFIDELTRQVKNNIIPMSRIDDAVARILRVKFVMGLFENPLPDSSLVNQLGKQEHRELAREAVRKSLVLLKNGKSYKKPLLPLPKKSAKILVAGTHADNLGYQCGGWTITWQGLDAKNLTSGTTILSAVKQTVDPATEVVFNENPDVNFLKSNKFSYAIVVVGEHTYAETFGDSLNLTIPEPGPSTITNVCGAIRCVVVVISGRPVVIQPYLPKIDALVAAWLPGTEGQGVADVLFGDYEFTGKLARTWFKRVDQLPMNVGDKHYDPLFPFGFGLTTNPTKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP82</accession>
    <name>V7BP82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotransferase-like plant mobile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G036900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP82"/>
    <dbReference type="Gramene" id="ESW18391">
        <property type="protein sequence ID" value="ESW18391"/>
        <property type="gene ID" value="PHAVU_006G036900g"/>
    </dbReference>
    <dbReference type="OMA" id="DEDVECH"/>
    <dbReference type="OrthoDB" id="1417722at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="209" mass="23925" checksum="68710FE5CA58CABC" modified="2014-02-19" version="1" fragment="single">VFRHNCRSKRLAVVNMVITLEQKSIIQSTPFGWLLFVREDIKLSRGLLSKLCSSWVERKQCFSIQYQFVSFSLVDVCLGVGLRVGGRKIDLRKSSIISHIRSFFEEGHVTVEMIYSVILKLGNDISSEDFCKLYVLLGLSEFILPTRLGLVHDGLFNLVDDLDKLDMYNWGSLVYEILVDSLCSTSKWITRGNMSYIHVDGCVYLLQVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPE9</accession>
    <name>V7BPE9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G042500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPE9"/>
    <dbReference type="SMR" id="V7BPE9"/>
    <dbReference type="STRING" id="3885.V7BPE9"/>
    <dbReference type="Gramene" id="ESW18456">
        <property type="protein sequence ID" value="ESW18456"/>
        <property type="gene ID" value="PHAVU_006G042500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW18457">
        <property type="protein sequence ID" value="ESW18457"/>
        <property type="gene ID" value="PHAVU_006G042500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVM9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWEERYQ"/>
    <dbReference type="OrthoDB" id="1925139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070176">
        <property type="term" value="C:DRM complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018737">
        <property type="entry name" value="DREAM_LIN52"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34555">
        <property type="entry name" value="INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34555:SF1">
        <property type="entry name" value="INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10044">
        <property type="entry name" value="LIN52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="283" mass="31068" checksum="BDA7E702F295C5AB" modified="2014-02-19" version="1">MDLPNRDKQQTVAVKKTALRDLQNDNKSMVPTSVGSPSFLKDKDPATDSNRVSGTKRPSSEYPVNQNLQQSPGNNAANGHLVYVRRKSETELGKGTAFENPSINAYCSHSKQLCCEEENAQPKSQIKEPKVSCFPAFAPFPMASSMNSSGKPSVPISLGKSSMKLAPVESDYVTASSGPATTTGNPKGLNNLHWEERYQQLQMVLKKLDQSDQEEYIHMLRSLSSVELSKLAVELEKRSIQLSLEEAKELQRVAALNVLGKSVKNFKAPVDHDECSDKLKASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPQ2</accession>
    <name>V7BPQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Heparan-alpha-glucosaminide N-acetyltransferase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G089300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7BPQ2"/>
    <dbReference type="STRING" id="3885.V7BPQ2"/>
    <dbReference type="Gramene" id="ESW19008">
        <property type="protein sequence ID" value="ESW19008"/>
        <property type="gene ID" value="PHAVU_006G089300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4683">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WHGFTFY"/>
    <dbReference type="OrthoDB" id="2149840at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31061:SF25">
        <property type="entry name" value="HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN (DUF1624)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31061">
        <property type="entry name" value="LD22376P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="345"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="390"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="436"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="464" mass="52484" checksum="A14396498B755DDD" modified="2014-02-19" version="1">MAEIKGEHGLNVSEELPVSDKKLPKSKRVASLDIFRGLTVALMILVDDAGGQWPMIGHAPWNGCNLADFVMPFFLFIVGMAIPLALKRIPNRLLAVKKVLVRTLKLLFWGLLLQGGFSHAPDNLTYGVDMKYIRWCGILQRIALAYLVVALVEIFSRSAQASDPEPTQLSIFKLYYWHWLVLACILAVYLALLYGMYVPDWQFTVHNPDSIYNGTTLTVTCGVRGKLDPPCNVVGYIDREVLGMNHMYKRPAWRRSEACTEKSPYEGPFKRSAPSWCYSPFEPEGILSSISAILSAIIGLHFGHVLVHLQDHSSRLKHWLLLGLALLASGLILHFTHAIPLNKQLYTLSYVCVTSGAAALVFSAFYIMVDIWGLTFLFLPLKWIGMNAMLVYVMAAEGIFAGFINGWYYDDPHNTLTYWIQKHVFINVWHSKRVGILLYVIFAEILFWAIVAGILHRFGIYWKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ60</accession>
    <name>V7BQ60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cupin type-2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G099800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ60"/>
    <dbReference type="SMR" id="V7BQ60"/>
    <dbReference type="STRING" id="3885.V7BQ60"/>
    <dbReference type="Gramene" id="ESW19143">
        <property type="protein sequence ID" value="ESW19143"/>
        <property type="gene ID" value="PHAVU_006G099800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS8W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWDMFFD"/>
    <dbReference type="OrthoDB" id="2106730at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1400.10">
        <property type="entry name" value="Sugar-phosphate isomerase, RpiB/LacA/LacB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012100">
        <property type="entry name" value="DRT102"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003500">
        <property type="entry name" value="RpiB_LacA_LacB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036569">
        <property type="entry name" value="RpiB_LacA_LacB_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30345:SF0">
        <property type="entry name" value="DNA DAMAGE-REPAIR_TOLERATION PROTEIN DRT102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30345">
        <property type="entry name" value="RIBOSE-5-PHOSPHATE ISOMERASE B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02502">
        <property type="entry name" value="LacAB_rpiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011609">
        <property type="entry name" value="DRT102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89623">
        <property type="entry name" value="Ribose/Galactose isomerase RpiB/AlsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin type-2" evidence="1">
        <location>
            <begin position="203"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="32950" checksum="860ADF07DDDA89E7" modified="2014-02-19" version="1">MAAEPTRPVKIIAAADDFGAPLKDALVAHLRSLTIEVEDLGTTSYYSAGAEVGRRVSQSSAVRGLVACGTGAGVSIFANKFPGVYAATCLIPSDAVNARSINNSNVLAVSGKYTSPEAAIEILDAWLNTPFKSACPANDGEPWPREIHTFLEQSLVEMPEIGKEGAFDTCAVCCLVKNRELNPIELIPGGSMKIVRETPTSAFVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKEERYDLTVGDYLFTPPGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLHTAQNAIDKDLALTNSTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRH9</accession>
    <name>V7BRH9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GST N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G001500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRH9"/>
    <dbReference type="SMR" id="V7BRH9"/>
    <dbReference type="STRING" id="3885.V7BRH9"/>
    <dbReference type="Gramene" id="ESW20612">
        <property type="protein sequence ID" value="ESW20612"/>
        <property type="gene ID" value="PHAVU_005G001500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPRA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YENNAYA"/>
    <dbReference type="OrthoDB" id="422574at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03041">
        <property type="entry name" value="GST_N_2GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011767">
        <property type="entry name" value="GLR_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45288">
        <property type="entry name" value="THIOREDOXIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45288:SF2">
        <property type="entry name" value="THIOREDOXIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00195">
        <property type="entry name" value="GLUTAREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="112"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="233"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="35065" checksum="196BEF836A148454" modified="2014-02-19" version="1">MSLGSVLPLFISTPSTTAKSLQWGNRNWASQRLRIVAKSKSDASPSSSTPTSLLSFLCPLLTLFSGKDPSQPRNLPFELATSSLASLSRFAWGNKSIAETSLCKEITSEHPFSLQLFEFEACPFCRRVREALTELDLSVEVYPCPKGSVRHREVVSITGGKEQFPFLIDKKKGISMYESGDIVKYLFEQYGEGRSPSSGLLESTIFTGWMPTILRAGRGMTRWVYSRPDPPPGKLELFSYENNPKARIVREALCELELPYILQNVGEGSHRMNLLLDASGSKEVPFFIDHSTGFQSGDCTTILSYLFETYSTVIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRV5</accession>
    <name>V7BRV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trigger factor ribosome-binding bacterial domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G006800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRV5"/>
    <dbReference type="SMR" id="V7BRV5"/>
    <dbReference type="STRING" id="3885.V7BRV5"/>
    <dbReference type="Gramene" id="ESW20689">
        <property type="protein sequence ID" value="ESW20689"/>
        <property type="gene ID" value="PHAVU_005G006800g"/>
    </dbReference>
    <dbReference type="OMA" id="FFFESII"/>
    <dbReference type="OrthoDB" id="1881930at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044183">
        <property type="term" value="F:protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051083">
        <property type="term" value="P:'de novo' cotranslational protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043335">
        <property type="term" value="P:protein unfolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1050">
        <property type="entry name" value="Trigger factor ribosome-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005215">
        <property type="entry name" value="Trig_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008881">
        <property type="entry name" value="Trigger_fac_ribosome-bd_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036611">
        <property type="entry name" value="Trigger_fac_ribosome-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30560:SF5">
        <property type="entry name" value="OS09G0515400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30560">
        <property type="entry name" value="TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05697">
        <property type="entry name" value="Trigger_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102735">
        <property type="entry name" value="Trigger factor ribosome-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trigger factor ribosome-binding bacterial" evidence="1">
        <location>
            <begin position="7"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="78" mass="8981" checksum="4EF71A6B9843E3FE" modified="2014-02-19" version="1">MFCVQQIPKDILLEVLGPSKVFKEVIKKIINSTVAEYVEKESLIVSKDLRVEQSFEDLETTFVEGEKFSFDVVLELKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSF5</accession>
    <name>V7BSF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G130500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSF5"/>
    <dbReference type="SMR" id="V7BSF5"/>
    <dbReference type="Gramene" id="ESW19501">
        <property type="protein sequence ID" value="ESW19501"/>
        <property type="gene ID" value="PHAVU_006G130500g"/>
    </dbReference>
    <dbReference type="OMA" id="CKPTTNP"/>
    <dbReference type="OrthoDB" id="770764at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd15800">
        <property type="entry name" value="PMEI-like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052421">
        <property type="entry name" value="PCW_Enzyme_Inhibitor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36710:SF18">
        <property type="entry name" value="PECTINESTERASE INHIBITOR 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36710">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754857" description="Pectinesterase inhibitor domain-containing protein" evidence="5">
        <location>
            <begin position="25"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="6">
        <location>
            <begin position="27"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="181"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="205" mass="22561" checksum="7242AAEBE6286BFB" modified="2014-02-19" version="1">MAFTLINTLCLFVSFSGLLFHTHAIRTPQARVWALCKPTTNPVVCFKTILPHVITAKKFNAYTALEIEIIITRELVVNTTNLITTLLANPSNSKSLNDSLEICSDQYDNMLDSIKDAMSQVALRNAGEARFKFSAVLSYLSACTDEFDNSPIVKEGKELYDIGGNCLDIMKAIEDRESRLRRRGATVGSPPAVPSPCQNEIGPCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT92</accession>
    <name>V7BT92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G051500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT92"/>
    <dbReference type="SMR" id="V7BT92"/>
    <dbReference type="STRING" id="3885.V7BT92"/>
    <dbReference type="Gramene" id="ESW21212">
        <property type="protein sequence ID" value="ESW21212"/>
        <property type="gene ID" value="PHAVU_005G051500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENFANNR"/>
    <dbReference type="OrthoDB" id="7763451at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd12459">
        <property type="entry name" value="RRM1_CID8_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12460">
        <property type="entry name" value="RRM2_CID8_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000665">
        <property type="entry name" value="Polyadenylate-binding protein-interacting protein 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000530">
        <property type="entry name" value="Polyadenylate-binding protein-interacting protein 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034823">
        <property type="entry name" value="CID8-like_RRM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034825">
        <property type="entry name" value="CID8-like_RRM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009818">
        <property type="entry name" value="PAM2_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32343:SF22">
        <property type="entry name" value="LD29830P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32343">
        <property type="entry name" value="SERINE/ARGININE-RICH SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07145">
        <property type="entry name" value="PAM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="7">
        <location>
            <begin position="111"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="7">
        <location>
            <begin position="208"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="297" mass="33218" checksum="7C16C59209096815" modified="2014-02-19" version="1">MAAVAEIPADANRMDSKPKAESEFSVQKLVDMFTKLNPLAKEFFPSSYPPNHDHLLQGFNQLSPTHFLVNSKPSANENFANNRRRRNSFNQVRRRVGGRSLKAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGEVTRLRLLGDHVHSTRIAFVEFVMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVTRPASIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV66</accession>
    <name>V7BV66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G0282001g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV66"/>
    <dbReference type="Gramene" id="ESW20945">
        <property type="protein sequence ID" value="ESW20945"/>
        <property type="gene ID" value="PHAVU_005G0282001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1399010at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15710">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE PRAJA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15710:SF77">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL21B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="50"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW20945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="104" mass="12052" checksum="C1094C24337AD445" modified="2014-02-19" version="1" fragment="single">VETEEEVETEEETEEEIEHYAATIPASAEAIDFLKTFSISPFLKMEIEKCSICLENVGFRENEENVKLSSLSCEHVLHHLCIVKWLQTSHTCPLCRYPMLIRHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWS9</accession>
    <name>V7BWS9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G0758000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast envelope</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWS9"/>
    <dbReference type="STRING" id="3885.V7BWS9"/>
    <dbReference type="Gramene" id="ESW21498">
        <property type="protein sequence ID" value="ESW21498"/>
        <property type="gene ID" value="PHAVU_005G0758000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2718">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTWISKD"/>
    <dbReference type="OrthoDB" id="203097at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009941">
        <property type="term" value="C:chloroplast envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004710">
        <property type="entry name" value="Bilac:Na_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361:SF28">
        <property type="entry name" value="P3 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361">
        <property type="entry name" value="SODIUM-BILE ACID COTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="200" mass="21816" checksum="4C224A15CC2CDEB8" modified="2014-02-19" version="1" fragment="single">VQLQALLNLCTSRICSFRVDPLKCCNSSNGYGGNEGRGLQEWIEQVGEALSTAFPSWVTIGCILGFFRPSYFSWVSPKLNIFGLTIIMLSMGMTLTLDDLRGALSMPKEVLSGFILQYSVMPISGFLVSKILNIPSHYAAGLILVGCFPGGMNFNLMNYMLFLGNVALSVIMTAASSICALGDFRVNKHFCSTLASLRDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWU4</accession>
    <name>V7BWU4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G077000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWU4"/>
    <dbReference type="Gramene" id="ESW21513">
        <property type="protein sequence ID" value="ESW21513"/>
        <property type="gene ID" value="PHAVU_005G077000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW21513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="121" mass="14028" checksum="B13F03B1DFDCC9AF" modified="2014-02-19" version="1">MFILHLNHSHGIEFIFFKVLAFVRTDKGNNSPHRADCHVCKCLLGFHTKAEQSDLMGLWAYLPCSKIPTREGAVNFLPIRGLYDCEYELASKEWIKPNFVQFFLVQNSFVRTEKPTCNTFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXU1</accession>
    <name>V7BXU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pollen allergen Ole e 1 family</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G066800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Ole e I family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXU1"/>
    <dbReference type="SMR" id="V7BXU1"/>
    <dbReference type="Gramene" id="ESW21391">
        <property type="protein sequence ID" value="ESW21391"/>
        <property type="gene ID" value="PHAVU_005G066800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2YZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DMETHNE"/>
    <dbReference type="OrthoDB" id="1392797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006041">
        <property type="entry name" value="Pollen_Ole_e1_allergen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614:SF20">
        <property type="entry name" value="POLLEN PROTEIN OLE E I-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614">
        <property type="entry name" value="PROTEIN DOWNSTREAM OF FLC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01190">
        <property type="entry name" value="Pollen_Ole_e_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754816" description="Pollen allergen Ole e 1 family" evidence="3">
        <location>
            <begin position="23"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="162" mass="17811" checksum="FED83DD3D5AD1125" modified="2014-02-19" version="1">MARSFAVVALFVSAVCFSSALARKSPEKFFVEGKIYCDPCQFAFESRLSFALSGVNVTLKCIKEENDIVSYQKNSTTDANGMYSIPVHGDHEEEICVVVADPPNEGQCKEAMPNKSDRIILTKNMGAASMTRYVNPLGFMTQTTDSQCFAVVQELGLDKLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXZ5</accession>
    <name>V7BXZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methionyl-tRNA formyltransferase, mitochondrial</fullName>
            <ecNumber evidence="2">2.1.2.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G001300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Fmt family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.9" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXZ5"/>
    <dbReference type="SMR" id="V7BXZ5"/>
    <dbReference type="STRING" id="3885.V7BXZ5"/>
    <dbReference type="Gramene" id="ESW22867">
        <property type="protein sequence ID" value="ESW22867"/>
        <property type="gene ID" value="PHAVU_004G001300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GITTMLM"/>
    <dbReference type="OrthoDB" id="10268103at2759"/>
    <dbReference type="PhylomeDB" id="V7BXZ5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004479">
        <property type="term" value="F:methionyl-tRNA formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd08646">
        <property type="entry name" value="FMT_core_Met-tRNA-FMT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08704">
        <property type="entry name" value="Met_tRNA_FMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.170:FF:000010">
        <property type="entry name" value="Methionyl-tRNA formyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00182">
        <property type="entry name" value="Formyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005794">
        <property type="entry name" value="Fmt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005793">
        <property type="entry name" value="Formyl_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011034">
        <property type="entry name" value="Formyl_transferase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044135">
        <property type="entry name" value="Met-tRNA-FMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041711">
        <property type="entry name" value="Met-tRNA-FMT_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11138">
        <property type="entry name" value="METHIONYL-TRNA FORMYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11138:SF5">
        <property type="entry name" value="METHIONYL-TRNA FORMYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02911">
        <property type="entry name" value="Formyl_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50486">
        <property type="entry name" value="FMT C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="Formyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl transferase N-terminal" evidence="6">
        <location>
            <begin position="58"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="Formyl transferase C-terminal" evidence="7">
        <location>
            <begin position="257"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="373" mass="40357" checksum="BD4DAD026EA8C1CA" modified="2014-02-19" version="1">MQMYSYRWCGSVPSTPTTATTMIRRLCCLQSVSSASTTTTTNKKPLVFLGAPQVSSIVLDTLLDASASPHSSFEVAAIVTQPAARRDRGKKLALSPLATHALDRGFSPDLIFTPHKAGDDAFLSNLKALQPHLCITAAYGNILPTKFLDIPQFGTVNIHPSLLPLYRGAAPVQRALLDGVRETGVSLAFTVRALDAGPIIATETIQVDDQIKAPDLLDLLFRKGSDLLIRELPSILDGSARLKAQPQDDSKVTLAPKINPDESWLSFDKEASVVHNKVRAFSGWPGTRARVVVVEKNGQQKTLDIKIITTRLSSHESVLFNEADDVAFVEGALVFPCGRGTTLEVLEVQLPGKKAVNAAAFWNGLRGQKLKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYB6</accession>
    <name>V7BYB6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G123800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYB6"/>
    <dbReference type="SMR" id="V7BYB6"/>
    <dbReference type="STRING" id="3885.V7BYB6"/>
    <dbReference type="Gramene" id="ESW22063">
        <property type="protein sequence ID" value="ESW22063"/>
        <property type="gene ID" value="PHAVU_005G123800g"/>
    </dbReference>
    <dbReference type="OMA" id="PEDWGQE"/>
    <dbReference type="OrthoDB" id="672067at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009785">
        <property type="term" value="P:blue light signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22645">
        <property type="entry name" value="BIC1_CID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040374">
        <property type="entry name" value="BIC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34207">
        <property type="entry name" value="PROTEIN BIC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34207:SF17">
        <property type="entry name" value="PROTEIN BIC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="14618" checksum="DC041BEA6A1153AE" modified="2014-02-19" version="1">MEGNSACCSTKLIISPSSTSSSLAPNEMLKNNTQECKPSDAGDNDDKVKDQEGHSENIGRVGVEETGREKLKRLREEVMMEKISIPEDWGQEQKLKDWIDYTVFDAFLAPHSLIVSARDALCMQSKVTKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1U5</accession>
    <name>V7C1U5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G104000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1U5"/>
    <dbReference type="SMR" id="V7C1U5"/>
    <dbReference type="Gramene" id="ESW24114">
        <property type="protein sequence ID" value="ESW24114"/>
        <property type="gene ID" value="PHAVU_004G104000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="68056at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="8619" checksum="922216CD4ACE08C3" modified="2014-02-19" version="1">MDKMKREHWKLAQAWERICDISKAEFEKVYQCLGVRLEAMVGLLISHILFIKSVFLSVFFLFFYSSWVLKLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2F6</accession>
    <name>V7C2F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glucose-6-phosphate dehydrogenase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G0570001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2F6"/>
    <dbReference type="STRING" id="3885.V7C2F6"/>
    <dbReference type="Gramene" id="ESW23553">
        <property type="protein sequence ID" value="ESW23553"/>
        <property type="gene ID" value="PHAVU_004G0570001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0563">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFRINIE"/>
    <dbReference type="OrthoDB" id="60984at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004345">
        <property type="term" value="F:glucose-6-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009051">
        <property type="term" value="P:pentose-phosphate shunt, oxidative branch"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.360.10">
        <property type="entry name" value="Dihydrodipicolinate Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001282">
        <property type="entry name" value="G6P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022675">
        <property type="entry name" value="G6P_DH_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429:SF16">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02781">
        <property type="entry name" value="G6PD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55347">
        <property type="entry name" value="Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glucose-6-phosphate dehydrogenase C-terminal" evidence="3">
        <location>
            <begin position="1"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="27519" checksum="93D38ED627DC8475" modified="2014-02-19" version="1" fragment="single">VFCLVAMEKPVSLKPEHIRDEKVKVLESVLPIKDDEVVLGQYEGYRDDDTVPDHSNTPTFASVILRVHNERWEGVPFILKAGKALNARKADIRVQFKDVPGDIFKCQKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMETIQSELDLSYRQRYQGATIPEAYERLILDTIRGDQQHFVRRDELKASWEIFTPLLHRIDKGEFKSIPYKPGTRGPAEADKVLLEKAGYVQTHGYIWIPPTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2J1</accession>
    <name>V7C2J1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Hydroxymethylglutaryl-CoA synthase</fullName>
            <shortName evidence="5">HMG-CoA synthase</shortName>
            <ecNumber evidence="5">2.3.3.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">3-hydroxy-3-methylglutaryl coenzyme A synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G123000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the condensation of acetyl-CoA with acetoacetyl-CoA to form HMG-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>acetoacetyl-CoA + acetyl-CoA + H2O = (3S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10188"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43074"/>
            <dbReference type="ChEBI" id="CHEBI:57286"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Metabolic intermediate biosynthesis; (R)-mevalonate biosynthesis; (R)-mevalonate from acetyl-CoA: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the thiolase-like superfamily. HMG-CoA synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.10" evidence="5"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2J1"/>
    <dbReference type="SMR" id="V7C2J1"/>
    <dbReference type="STRING" id="3885.V7C2J1"/>
    <dbReference type="Gramene" id="ESW24349">
        <property type="protein sequence ID" value="ESW24349"/>
        <property type="gene ID" value="PHAVU_004G123000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1393">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNKHNSL"/>
    <dbReference type="OrthoDB" id="1269963at2759"/>
    <dbReference type="UniPathway" id="UPA00058">
        <property type="reaction ID" value="UER00102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004421">
        <property type="term" value="F:hydroxymethylglutaryl-CoA synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006084">
        <property type="term" value="P:acetyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010142">
        <property type="term" value="P:farnesyl diphosphate biosynthetic process, mevalonate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016126">
        <property type="term" value="P:sterol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00827">
        <property type="entry name" value="init_cond_enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000008">
        <property type="entry name" value="3-hydroxy-3-methylglutaryl coenzyme A synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000590">
        <property type="entry name" value="HMG_CoA_synt_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013746">
        <property type="entry name" value="HMG_CoA_synt_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013528">
        <property type="entry name" value="HMG_CoA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010122">
        <property type="entry name" value="HMG_CoA_synthase_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01833">
        <property type="entry name" value="HMG-CoA-S_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43323">
        <property type="entry name" value="3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43323:SF21">
        <property type="entry name" value="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08540">
        <property type="entry name" value="HMG_CoA_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01154">
        <property type="entry name" value="HMG_CoA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01226">
        <property type="entry name" value="HMG_COA_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0753">Steroid metabolism</keyword>
    <keyword evidence="5" id="KW-0756">Sterol biosynthesis</keyword>
    <keyword evidence="5" id="KW-1207">Sterol metabolism</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hydroxymethylglutaryl-coenzyme A synthase N-terminal" evidence="6">
        <location>
            <begin position="6"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Hydroxymethylglutaryl-coenzyme A synthase C-terminal" evidence="7">
        <location>
            <begin position="179"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="3">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="3">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="213"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR610122-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR610122-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW24349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="458" mass="50696" checksum="17EBEA5AA98BD8F4" modified="2014-02-19" version="1">MASSHPTNVGILAMDIYFPPSCVTQEALEGHDGVSKGKYTIGLGQDCMAFCSEVEDVISMSLTVVASLLEKFNVDPKQIGRLEVGSETVIDKSKSIKTFLMQVFEASGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYRIFCEKFEKLEGRPFSISDSDYFVFHSPYNKLVQKSFGRLYFNDFMRNLSFVDEAARETLAPYASLSSDESYQSRDLEKANQQAAKHVYDAKVQPSTLIPKQVGNMYTASLYAAFASLLHNKNTSLVGKRVVMFSYGSGLTATMFSVHLQEGQHPFNLSNIVTVMNVSDKLKQRLEIPPEKFVETLKIMEHRYGGKDFVTSKDCSYLPPGTFYLTNVDSMYRRYYAKKDKVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C392</accession>
    <name>V7C392_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G145400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C392"/>
    <dbReference type="SMR" id="V7C392"/>
    <dbReference type="STRING" id="3885.V7C392"/>
    <dbReference type="Gramene" id="ESW24614">
        <property type="protein sequence ID" value="ESW24614"/>
        <property type="gene ID" value="PHAVU_004G145400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVFSIME"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:003613">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g23020"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001727">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF17">
        <property type="entry name" value="OS12G0638900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="120"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="156"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="225"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="260"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="295"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="331"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="611"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="680"/>
            <end position="714"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="715"/>
            <end position="749"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="750"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="785"/>
            <end position="819"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW24614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="852" mass="97776" checksum="614725BBE49DB2B5" modified="2014-02-19" version="1">MKKCFQQQRLQPLPSCQILAFSGTLQFQLSFSCFKAKKRVWVPEAKLNYKPQLRVSKRAPKQSRDHPKLFSPDADVEFSSELSTAQCNAILKRLEESAEDDAETLSFFEKMREGGKLERNAGAYNVILRVVSRRGDWEGAEKLISEMKASFGSELSFNVFNTLIYACCKRNLVKLGTKWFRMMLDYGVAPNVATVGMLMGLYRKGWNLEEAEFAFSQMRGFGIVCESAYSSMITIYTRLRLYEKALCVIEFMRRDEVVPNLENWLVMLNAYSQQGKLEDAERVLEAMQEAGFCANIIAYNTMITGYGKAGKMDSAQRLFMRIRQSSQLDPDETTYRSMIEGWGRADNYVYATRYYKELKQLRFKPNSSNLFTLIKLEAKYGDDEAVFEILDDMVECGCHCSSIIGTLLQVYESAGKVHKVPHLLKGVFYQHVLVNQSSCSTLVMAYVKHRLVDDALKVLNDKEWRDSRYEDNLYHLLICSGKEAGFLEDAVKIYTQMPKCDDIPNMHIACTMIDIYSVMGLFKDAEELYLKLKSSGVALDMIAFSIVVRMYVKAGSLKDACVVLEALHERSDIVPDKFLLCDMLRIYQRCNMVDKLTDLYYKISKNREDFDQELYNCVINCCAQALPVDELSRLFDEMIQREFVPSTITFNVMLDVFGKAKLFKKVRRLYNMAKKEGLVDVITYNTIVAAYGKNKDFDNMSLTVQKMEFDGFSVSLEAYNSMLDAYGKNGQMETFRSVLQRMKDSNCASDHYTYNTMINIYGEQGWINEVATVLTELKECGLRPDLCSYNTLIKAYGIAGMVEEAVGLIKEMRKNGIEPDKTTYTNLITALRRNDNFLEAVKWSLWMKQMEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4I9</accession>
    <name>V7C4I9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G117100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7C4I9"/>
    <dbReference type="STRING" id="3885.V7C4I9"/>
    <dbReference type="Gramene" id="ESW24283">
        <property type="protein sequence ID" value="ESW24283"/>
        <property type="gene ID" value="PHAVU_004G117100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU29">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDQFTPV"/>
    <dbReference type="OrthoDB" id="1931597at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012418">
        <property type="entry name" value="CAP160"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057059">
        <property type="entry name" value="LTI65/LTI78_PGEED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056605">
        <property type="entry name" value="LTI65_LTI78_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057058">
        <property type="entry name" value="LTI65_LTI78_NYQTKV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037491">
        <property type="entry name" value="LTI78/LTI65"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33836">
        <property type="entry name" value="LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33836:SF1">
        <property type="entry name" value="LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07918">
        <property type="entry name" value="CAP160"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23403">
        <property type="entry name" value="LTI65_LTI78_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23402">
        <property type="entry name" value="LTI65_LTI78_NYQTKV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23399">
        <property type="entry name" value="LTI65_PGEED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LTI65/LTI78 N-terminal" evidence="4">
        <location>
            <begin position="35"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="LTI65/LTI78 NYQTKV repeat" evidence="3">
        <location>
            <begin position="163"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="LTI65/LTI78 PGEED repeat" evidence="2">
        <location>
            <begin position="1142"/>
            <end position="1172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="228"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="296"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="511"/>
            <end position="750"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="774"/>
            <end position="800"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="830"/>
            <end position="852"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1079"/>
            <end position="1100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1262"/>
            <end position="1299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="244"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="298"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="339"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="380"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="462"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="511"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="546"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="589"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="630"/>
            <end position="643"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="652"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="673"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="691"/>
            <end position="706"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="717"/>
            <end position="729"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="730"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="776"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="830"/>
            <end position="847"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1084"/>
            <end position="1094"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1262"/>
            <end position="1279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1290"/>
            <end position="1299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW24283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1299" mass="141378" checksum="4B65197DCCB00884" modified="2014-02-19" version="1">MDPRAVQTQGHNSGQHHHNPQNVGSRVAHGDEHNQHEKKTVMKKVKEKAKKIKDTITKHGHHDHEPGHEYRYEDQHIPDDHDLDEEDDEDVYPEVHGAPIYDSAGVRGVGTSGVNLGGIAVKGGEPHHEPRVMVVSPTTGVNQSRASDPTRTFVAVEKAVHAKVNLERPIHLEEDPHAPRSAHQAYAPANYETKVKDPSGLGGAEIDVTPVEKSFSMLTILYEPNQEPNLFPTVPETHHHPSAGSHSQFTPELSTATMPELSGEVKTQYPKRHDQFAPELSTPTKTHYPEAKIHDQYLPQQSSATKNQYPSSRSHDQFTAVSSTGPNIQSTKFHEQHFPQHSSATKTQQPSSGSHDQFTPVSSTGPNIQHPSTKFHDQHLPQQSSATKPQYPSSGTHDQFTPVSSTGPNIQYPSTFHDQHLPQQSSATKPQFPSSGTHDQFTPVSSTGPNIQHPSTFHDQHLPQQFSSTKPQFPSSGTHDQFTPVSSTGPNIQHPSTKIHDQHLPQQFSATKSQYPSSGNHDQFTPVSSTGPNIQHPLTKIHDQHLPQQSSATKTQYPSSGTHDLFTPVSSTEPNFQHPSTKIHGQHLPHQSTATKTQSPPSRSTDRFASELSTEPTLRPPYTKIHDQHLPQQSNETRHQYPSTGRHVQFTPELSTEPKVQSHYTKTHDEYPSSVNQDQYHSTTNHDRHLPQQSSPSATNTQYPSSRSHDHFLPEFSTETRTPQAYNTTHMEESQYGSREKPSNESSYTDKISSATASIADTAITAKNNVASKLGYGDRNESEATRAKKQEENISNEEPSTVSLATAVMADKAVAAKNTVASKLGYGADTETTQTKHQQQNTSSEKPSTISSATSTIADKAVAAKNTVASKLGYGPEATHQEEEKPSTISSATSAIADKAASAKNTVASKLGYGAETTHQEEKPSTISSATSAIADKAASAKNTVASKLGYGPETTHREEEKPSVISSATSAIADTAVSAKNTVASKLGYDTETTQAKHHEEKPSTISAATSAISDKAASAKNAVASKLGYGANTETTQTKNYQENPSNQQQSTISSATSAVADKAISAKNTVASKLGFGDTTTAHEERRREHAAAPTEYGKSVAQSLTENLGPYGNVGGVGSGVKSNVAGEEYASVGVEQDKGVSMKDYLADKLRPTPEDSALSEVISETLHRKEPVKFTEEGNKGGKKVISDAVHEREDEAERRVDQQIPLWKVTESEEVKRRLGSEDIETERRYQEMYVKTPGTGVVDKLKGMVGSWITNPMENQSSQDSSTTNYGTEVEHLNQGGGERRLQDSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5I7</accession>
    <name>V7C5I7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA-3-methyladenine glycosylase I</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G037100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5I7"/>
    <dbReference type="SMR" id="V7C5I7"/>
    <dbReference type="Gramene" id="ESW25452">
        <property type="protein sequence ID" value="ESW25452"/>
        <property type="gene ID" value="PHAVU_003G037100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRZX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSFSCYI"/>
    <dbReference type="OrthoDB" id="3941538at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.30">
        <property type="entry name" value="Hypothetical protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005019">
        <property type="entry name" value="Adenine_glyco"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31116:SF19">
        <property type="entry name" value="DNA-3-METHYLADENINE GLYCOSYLASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31116">
        <property type="entry name" value="OS04G0501200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03352">
        <property type="entry name" value="Adenine_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="DNA-glycosylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="85"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="283"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR605019-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW25452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="300" mass="34557" checksum="48FF131240C018CF" modified="2014-02-19" version="1">MEKRTISQESRKLSQIFFPKQLNKVYPIRLQRSSSTSSISSLSSSLSQNSDDSSLTDSLNLVDDNFQFALNLISPSGRRRGPAVTTTTPHQQQSSHTAEPGELRRCNWITKNCDNAYIEFHDECWGVPTYDDKTLFELLTLSGLLIDYNWTEILKRKKILRQVFAGFDPTTVAKMEEKEIMEITSNKEIMLPDCRVRCIVDNARCIMKIVRECGSFSCYIWGYVNHKPVINKFKFPRDVPLRTSKADTISKDLIKRGFQFLGPVIVYSFMQAAGLTIDHLVDCHRHNECVRLAQRPWRHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6A5</accession>
    <name>V7C6A5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Methyltransferase type 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G171000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6A5"/>
    <dbReference type="Gramene" id="ESW24908">
        <property type="protein sequence ID" value="ESW24908"/>
        <property type="gene ID" value="PHAVU_004G171000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS7X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCTSWKS"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43036">
        <property type="entry name" value="OSJNBB0011N17.9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43036:SF1">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransferase type 11" evidence="1">
        <location>
            <begin position="172"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="304" mass="33854" checksum="41A01B37A9B3BA84" modified="2014-02-19" version="1">MANVVGLRLPLPVLGSVCVSHSSSTFATTLSTPPLNNLNWKVKGPRRMVLGLGVSFFSQFLTMGTNSFIASARIKGGPSVDELLKDVDWPEQFPFKEEDFQRFDETPDSLFYEAPRFVTHIDDPAIAALTKYYSKVFPPSNTPGVSILDTCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYAVQDLNVNPKLPFEDNSFDIITNVVSVDYLTKPLDVFKEMCRILKPGGQAIMSFSNRCFWTKAISIWTSTGDADHVMIVASYFHYAGGFEPPQAVDISPNPGRSDPMYIVYSRKLSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C969</accession>
    <name>V7C969_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G142000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be involved in the transport of sterols.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the OSBP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C969"/>
    <dbReference type="SMR" id="V7C969"/>
    <dbReference type="STRING" id="3885.V7C969"/>
    <dbReference type="Gramene" id="ESW26717">
        <property type="protein sequence ID" value="ESW26717"/>
        <property type="gene ID" value="PHAVU_003G142000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2210">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEPLFFK"/>
    <dbReference type="OrthoDB" id="14833at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032934">
        <property type="term" value="F:sterol binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.3490:FF:000007">
        <property type="entry name" value="Oxysterol-binding protein-related protein 4B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.120:FF:000011">
        <property type="entry name" value="Oxysterol-binding protein-related protein 4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037239">
        <property type="entry name" value="OSBP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000648">
        <property type="entry name" value="Oxysterol-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018494">
        <property type="entry name" value="Oxysterol-bd_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10972:SF170">
        <property type="entry name" value="OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10972">
        <property type="entry name" value="OXYSTEROL-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01237">
        <property type="entry name" value="Oxysterol_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144000">
        <property type="entry name" value="Oxysterol-binding protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01013">
        <property type="entry name" value="OSBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="4" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="378" mass="42830" checksum="80BD4E9377EA9F4D" modified="2014-02-19" version="1">METKIVLSRPLSLERQSDQETNYKAPNILRRILSLFKNVRPGSDVSCFKLPPEFNMPKSELQCYAECVYSTALDILSNLNGGKTPLDRLISVVAWTISAVRPLWFGVAPYNPTLGETHHVSKGNLNVLLEQVSHHPPVSALHATDSKENIEIIWCNSTVPKFTGTSVEAHVHGKRELKLHNHGETYEMNSPNLLIRIFPVPGNDWFGNVTIRCIETGLVAELSYISQSFFGFGTNRRLIKGKIFDSLSKKILCKIEGHWDSTVTVKNTDNAEVRVIYDAKEVISGLQAPVVKDLERVWPTETVLVWNKLSEAILSKDWEKAKEAKKSIEERQRELHRERESKGENWVPKHFLVSCSKEKGWNCSPIEKWVPNAPIISL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBA0</accession>
    <name>V7CBA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Iron-sulfur cluster assembly protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G201000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion matrix</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the NifU family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBA0"/>
    <dbReference type="SMR" id="V7CBA0"/>
    <dbReference type="STRING" id="3885.V7CBA0"/>
    <dbReference type="Gramene" id="ESW27429">
        <property type="protein sequence ID" value="ESW27429"/>
        <property type="gene ID" value="PHAVU_003G201000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3361">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YMTERVR"/>
    <dbReference type="OrthoDB" id="1925777at2759"/>
    <dbReference type="PhylomeDB" id="V7CBA0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06664">
        <property type="entry name" value="IscU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1010.10:FF:000016">
        <property type="entry name" value="Iron-sulfur cluster assembly protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011339">
        <property type="entry name" value="ISCU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002871">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01999">
        <property type="entry name" value="iscU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10093">
        <property type="entry name" value="IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01592">
        <property type="entry name" value="NifU_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82649">
        <property type="entry name" value="SufE/NifU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="NIF system FeS cluster assembly NifU N-terminal" evidence="3">
        <location>
            <begin position="24"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="17628" checksum="4BBDDFA60CA1A95B" modified="2014-02-19" version="1">MLRISANRVLGTTSLGVRVPARLYHERVVDHYDNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAMATASGKAATEEMPATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC50</accession>
    <name>V7CC50_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA-directed RNA polymerase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G153900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC50"/>
    <dbReference type="STRING" id="3885.V7CC50"/>
    <dbReference type="Gramene" id="ESW26855">
        <property type="protein sequence ID" value="ESW26855"/>
        <property type="gene ID" value="PHAVU_003G153900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1038">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SMEYHHA"/>
    <dbReference type="OrthoDB" id="276422at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034245">
        <property type="term" value="C:mitochondrial DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006390">
        <property type="term" value="P:mitochondrial transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1320.10:FF:000001">
        <property type="entry name" value="DNA-directed RNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1320.10">
        <property type="entry name" value="DNA-directed RNA polymerase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002092">
        <property type="entry name" value="DNA-dir_Rpol_phage-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037159">
        <property type="entry name" value="RNA_POL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029262">
        <property type="entry name" value="RPOL_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10102:SF1">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10102">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14700">
        <property type="entry name" value="RPOL_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01311">
        <property type="entry name" value="RPOL_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA-directed RNA polymerase N-terminal" evidence="3">
        <location>
            <begin position="115"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="115"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="249"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW26855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="45553" checksum="1C861920366E5FC7" modified="2014-02-19" version="1">MGFATFFPTPLLHRGTPPTKSQSLHHFLFFPIPISSFLPSSLIPVTIKPSRTHVLFDSFHHNFVQDLENCHEPVNGVHQTEPPDPPQRVFIQEPWILNDLLRNDIEEEKHNGLRRRQIQMETEALEKTVEEYRELEREMREKNLTPNLPHVKALFLGWFGPLKEAIEAEQKSKRTKKHRVAFAPHIDSLPAAKMAVIVMHKVMGLVSMEYHHAGCVLLVDAAVQIGMAVEHEVRIHNFLEKTRTHKSKKTEAAREDSTHNDTQKLRKHVNGLIKRRRLKQVQMLLKEEECGPWGIDIQAKLGSRLIDLLIQTAFVHSPVNQSADTPPDIRPAFRHTFKVISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWKGYGTWNGSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCA1</accession>
    <name>V7CCA1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G163100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCA1"/>
    <dbReference type="STRING" id="3885.V7CCA1"/>
    <dbReference type="Gramene" id="ESW26978">
        <property type="protein sequence ID" value="ESW26978"/>
        <property type="gene ID" value="PHAVU_003G163100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4791">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFKDRRR"/>
    <dbReference type="OrthoDB" id="5395350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1000.10:FF:000021">
        <property type="entry name" value="Zinc finger CCCH domain-containing protein 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041686">
        <property type="entry name" value="Znf-CCCH_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15725:SF0">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15725">
        <property type="entry name" value="ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15663">
        <property type="entry name" value="zf-CCCH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="6"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="37"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="83"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="6"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="37"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="83"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="118"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="359"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="473"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="122"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="381"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="476"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="515" mass="58832" checksum="0755F1DC4C9D805B" modified="2014-02-19" version="1">MDEDSLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWVSGECLNPTCAFRHPPLDGHTGVPAPPEPTQNSLPANKTMVPCYFFFNGFCNKGDKCSFLHGSDDSIFTGKPVKNDNGSTDVHNLENKSSGNGTGVASVPTHQSLTAPKHLSDFKLQPKEDHQLQLTKNVKQQGDSLVISASEYKEAAVSGSDSPFPDDGFVHNMSHLRTEQGSEEQVNSQIEPEERWESSPHSPGFDVLVHDELENIGYEEDSEYLPVLDRNEQELNEQYLGHEFKDPIEYDTMCPEADILYPQETYDGYRCFDRDLAHANGRTVRTYSRDIFLDSIFSRKRIRMSAEVAAYDSNLDLRDHLRRRRENNGPPRRQESSSLMIRNQERHQRPGIEQRPSGRLTSQLGYSAIDSIGEVETLSIANKHGLFRRSQQHRPRKHYREKPVRRPFLSSKISRKPVSKQRGFIQESTTFSAPKSLAEIKEEKKKAEEGLHWKSTSTDFQDPKPLSEILKDKRTLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCL2</accession>
    <name>V7CCL2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Precursor of CEP9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G245100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
            <location evidence="1">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the C-terminally encoded plant signaling peptide (CEP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCL2"/>
    <dbReference type="Gramene" id="ESW27932">
        <property type="protein sequence ID" value="ESW27932"/>
        <property type="gene ID" value="PHAVU_003G245100g"/>
    </dbReference>
    <dbReference type="OMA" id="ESPHYEK"/>
    <dbReference type="OrthoDB" id="1300036at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005179">
        <property type="term" value="F:hormone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006995">
        <property type="term" value="P:cellular response to nitrogen starvation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902025">
        <property type="term" value="P:nitrate import"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901371">
        <property type="term" value="P:regulation of leaf morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000280">
        <property type="term" value="P:regulation of root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048364">
        <property type="term" value="P:root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033250">
        <property type="entry name" value="CEP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33348">
        <property type="entry name" value="PRECURSOR OF CEP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33348:SF44">
        <property type="entry name" value="PRECURSOR OF CEP6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0052">Apoplast</keyword>
    <keyword evidence="5" id="KW-0372">Hormone</keyword>
    <keyword evidence="7" id="KW-0379">Hydroxylation</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="99"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="104"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="141"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="170"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="179" mass="19691" checksum="DC5AADB16F3E8867" modified="2014-02-19" version="1">MHYHLILTKTINQIHVTTSFSLTYYTYILFASLVTMAKFQTLQKYFFIFLALVLCHGSLLAHGRKMNIKALNQHYLQNTNTNTNTVANDPQVHLPPLKTNVESPHYEKSSKLEDSGEGSINAFRPTTPGGSPGVGHGIITSEDHNNMKSSVAEDSKSEGPGHSPGVGHPNYQNKIGQGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDU4</accession>
    <name>V7CDU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PABS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G203700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDU4"/>
    <dbReference type="SMR" id="V7CDU4"/>
    <dbReference type="STRING" id="3885.V7CDU4"/>
    <dbReference type="Gramene" id="ESW27460">
        <property type="protein sequence ID" value="ESW27460"/>
        <property type="gene ID" value="PHAVU_003G203700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR3C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHQVFPG"/>
    <dbReference type="OrthoDB" id="2016285at2759"/>
    <dbReference type="PhylomeDB" id="V7CDU4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010487">
        <property type="term" value="F:thermospermine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006596">
        <property type="term" value="P:polyamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000299">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43317">
        <property type="entry name" value="THERMOSPERMINE SYNTHASE ACAULIS5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43317:SF1">
        <property type="entry name" value="THERMOSPERMINE SYNTHASE ACAULIS5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="329" mass="36888" checksum="9627DF050293831C" modified="2014-02-19" version="1">MRTVLSCPQTQPQRFLRNSIPPPTHPLRLHLTPTRISLSLKLPSSSLLVKCQKQPQQQQKTQDEGIPAEEVKILVKFKSRHNYIRVLEVSRKADHPFRGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPHAVLHGWELDPAVIQVAREYFGLGKLERENQQRLFIYIGNALNATVPNGFSGIVVDLFSKGCLIPELQEPATWEKLRGQLRKGGRIMVNVGGSCVEPESRLRDGKVVMEETLRAMKKVFGKKLFVLNLGNRKDDSSLALTGDLPPPEEWKKRLPGPLKCYTQMWMPYSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDV5</accession>
    <name>V7CDV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="5">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_003G204500g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the leguminous lectin family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the leguminous lectin family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDV5"/>
    <dbReference type="SMR" id="V7CDV5"/>
    <dbReference type="Gramene" id="ESW27470">
        <property type="protein sequence ID" value="ESW27470"/>
        <property type="gene ID" value="PHAVU_003G204500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR0Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLYQHGQ"/>
    <dbReference type="OrthoDB" id="547665at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002229">
        <property type="term" value="P:defense response to oomycetes"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd06899">
        <property type="entry name" value="lectin_legume_LecRK_Arcelin_ConA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000423">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase S.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000108">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase S.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000086">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase S.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050528">
        <property type="entry name" value="L-type_Lectin-RKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019825">
        <property type="entry name" value="Lectin_legB_Mn/Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001220">
        <property type="entry name" value="Legume_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27007">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00139">
        <property type="entry name" value="Lectin_legB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00307">
        <property type="entry name" value="LECTIN_LEGUME_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 21" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0430">Lectin</keyword>
    <keyword evidence="16 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 21" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 22" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="305"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="23">
        <location>
            <begin position="365"/>
            <end position="642"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="393"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW27470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="670" mass="73708" checksum="515C3160634A8E15" modified="2014-02-19" version="1">MSPSKIPVAGEFSFSGMWLVILLLHLALFATPSLCLDFLFNSFTGITNLTLVKDARVDASVIRMTNDSNQYSYGRAFYPTKVPITKPSSNSSSSSITSFSTSFVFSVLPEITTSPGFGLAFVLCNTTDPPGAIASQYFGLFTNATSPTLFPLVAVEFDTGQNPEFNDINDNHIGIDLNNIESTIATPAGYYNSTGGFVPVRMRTGQNIRAWINFDGHNLLFNVTVAPIGVSRPLKPTLSHYVPTIGNYVSAEMYVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFEPEPSSSSLSGGAIAGIVVGCVVFVVICGCGFYLWWRIQKGKDEEDDEIEDWELEYWPHRFSYEELSSATGEFGKEQLLGSGGFGRVYKGTLPNKTQMAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWVFDRPEKLLGWEQRRRILVDVAEGLTYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVVEEEVVLIDWVRELYAKGCAREAADARIGGEYDEGEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGENTPEAPGKVLSDLVSGGDDFDEAAPLQTSSTRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE73</accession>
    <name>V7CE73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Phospholipid-transporting ATPase</fullName>
            <ecNumber evidence="16">7.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_003G179500g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Involved in transport of phospholipids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 16">
            <text>ATP + H2O + phospholipidSide 1 = ADP + phosphate + phospholipidSide 2.</text>
            <dbReference type="EC" id="7.6.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 16">Membrane</location>
            <topology evidence="1 16">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.1" evidence="16"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE73"/>
    <dbReference type="SMR" id="V7CE73"/>
    <dbReference type="STRING" id="3885.V7CE73"/>
    <dbReference type="Gramene" id="ESW27166">
        <property type="protein sequence ID" value="ESW27166"/>
        <property type="gene ID" value="PHAVU_003G179500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0206">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YCEDAIR"/>
    <dbReference type="OrthoDB" id="377733at2759"/>
    <dbReference type="PhylomeDB" id="V7CE73"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140326">
        <property type="term" value="F:ATPase-coupled intramembrane lipid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045332">
        <property type="term" value="P:phospholipid translocation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901703">
        <property type="term" value="P:protein localization involved in auxin polar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02073">
        <property type="entry name" value="P-type_ATPase_APLT_Dnf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.70.150.10:FF:000023">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1110.10:FF:000042">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000014">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006539">
        <property type="entry name" value="P-type_ATPase_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032631">
        <property type="entry name" value="P-type_ATPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01652">
        <property type="entry name" value="ATPase-Plipid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF70">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16209">
        <property type="entry name" value="PhoLip_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 14 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 15 16" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 14 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 16" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="107"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="302"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="357"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="925"/>
            <end position="945"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="957"/>
            <end position="974"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="1004"/>
            <end position="1026"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="1046"/>
            <end position="1065"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="1072"/>
            <end position="1091"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="1111"/>
            <end position="1131"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase N-terminal" evidence="18">
        <location>
            <begin position="40"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="19">
        <location>
            <begin position="890"/>
            <end position="1140"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="1188"/>
            <end position="1218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="1197"/>
            <end position="1212"/>
        </location>
    </feature>
    <feature type="active site" description="4-aspartylphosphate intermediate" evidence="13">
        <location>
            <position position="426"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="426"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="426"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
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        <location>
            <position position="427"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
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        <location>
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        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
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        <location>
            <position position="544"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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        <location>
            <position position="591"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
    </feature>
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        <location>
            <position position="614"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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        <location>
            <position position="648"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
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        <location>
            <position position="729"/>
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        <ligand>
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        </ligand>
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        <location>
            <position position="730"/>
        </location>
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            <name>ATP</name>
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        </ligand>
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        <location>
            <position position="731"/>
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            <position position="838"/>
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            <position position="844"/>
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        </ligand>
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        <location>
            <position position="864"/>
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        </ligand>
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            <position position="867"/>
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        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008109"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022692"/>
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            <dbReference type="ARBA" id="ARBA00022723"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022741"/>
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    </evidence>
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    </evidence>
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    </evidence>
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    </evidence>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00023136"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00034036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00054150"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR606539-1"/>
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    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU362033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF16209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW27166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1218" mass="137878" checksum="E9D3D5DCFB01A166" modified="2014-02-19" version="1">MAGGRRRRHHFGRIHAFTCGKASMKEEHSLIGGPGFSRIVYCNDPERATSSLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMVKEFIEDFRRKQQDIEMNNRKVKVHGGSGDFAYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSSFQNFRSVITCEDPNANLYTFVGSMELDDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFLLILISFIGSIFFGVITNDDIENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVNMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRHESDSVQELKEVKNIAKVGESKSSIKGFNFMDERIMNGSWIKEPNANVIQNFLRLLAVCHTAIPEIDEGTGKVSYEAESPDEAAFVIAARELGFEFYERTHTAISLRELDPITGLKTERSYKILNVLEFSSARKRMSVIVRDKEGKLLLLSKGADSVMFERIAKNGRDFEENTRQHISEYADSGLRTLILAYRELNEEEYYQFNKEFTEAKNLVSADQEQIVDGIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFSCSLLRQGMKQIIISSDTPENKALEKMEDKSAADVAIKSSVIRQLREASALLSSSDENYEALALIIDGKSLTYALEDGVSDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWKRIIGWVVNGVVTSAIIFFFCIHAMEQQAFRKGGEVVELEVLGATMYTCVVWVVNCQMALSITYFTYVQHIFIWGSIIFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPYFWIITLLILIASLLPYFVYASIQMRFFPMYHQMIQWIRKDGQTSDPEYCNMVRQRSIRHTTVGFTARLEASKRFNASRRVESSSRPETASTILESSNHSEGQFEDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF76</accession>
    <name>V7CF76_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">DREB1F protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">DREB1F</name>
        <name evidence="11" type="ORF">PHAVU_003G212800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <reference evidence="10" key="3">
        <citation type="submission" date="2016-04" db="EMBL/GenBank/DDBJ databases">
            <title>Genome-wide investigation, phylogeny and expression profiling of novel genes from the DREB subfamily in common bean (Phaseolus vulgaris L.).</title>
            <authorList>
                <person name="Konzen E.R."/>
                <person name="Tsai S.M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
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        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="ANC70170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW27561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7CF76"/>
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        <property type="protein sequence ID" value="ESW27561"/>
        <property type="gene ID" value="PHAVU_003G212800g"/>
    </dbReference>
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        <property type="component" value="Chromosome 3"/>
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        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AP2/ERF domain"/>
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    </dbReference>
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        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045277">
        <property type="entry name" value="DRE1A-I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839:SF26">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="9">
        <location>
            <begin position="107"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="64"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ANC70170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="32295" checksum="C8F6EBAF582B6099" modified="2014-02-19" version="1">MSTKSVVADNKNISISYFLLSTVSENGFFNFTAQPNQSIANVNPQMNLLKQSSDESNNGCYVCSSPETSSSNPPNAVHSDEELHALASARPKKRAGRRIFKETRHPVYRGVRQRNNNKWVCEMRVPNDKSTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLPLPASTNAKEIRRVAGEAVVAIAAEDSCVEQLENENVNAVADCEVSSSGLSIDEDGSSSKALRVFCDLDEITIPDASGFEEMHAWLQSMADKPLRSPTFVTYVRDWISVEDDAEVSLWSFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFK2</accession>
    <name>V7CFK2_PHAVU</name>
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        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G255900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFK2"/>
    <dbReference type="SMR" id="V7CFK2"/>
    <dbReference type="Gramene" id="ESW28065">
        <property type="protein sequence ID" value="ESW28065"/>
        <property type="gene ID" value="PHAVU_003G255900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQVK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHANDRC"/>
    <dbReference type="OrthoDB" id="1872732at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
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        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="Methyltransferase, alpha-helical capping domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MeTrfase_7"/>
    </dbReference>
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        <property type="entry name" value="MeTrfase_capping"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31009">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Methyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="368" mass="41616" checksum="A738FD7A3A409796" modified="2014-02-19" version="1">MEVSQVLCMNGGVGDASYANNSLVQQKVISLTKPIREEAITSLYCSKLPKSLAIADLGCSSGPNTLYVVSELIETVEKLCRQLNHKSPEYKVFLNDLPGNDFNNIFKSIDSFKEKLQNEMEGGPCYFSGVPGSFYGRVFPSRSLHFVHSSYSLQWLSKVPEGVDNNKENIYLGRTSPSSVVRAYYDQFQRDFSLFLKCRAEELVEGGRMALTFLGRRHEDPCSKDGCYIWELMASALNDMVSQGMIKEEQVDSFNIPQYTPSPSEVKLEVLKEGSFSINRLEVSEVNWNALDDWNALEFESERFESVGDGGYNVAQCMRAVAEPMLVSHFGEDIIEEVFTRYQQILADRMAKEKTKFFNVTILLTRKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFL4</accession>
    <name>V7CFL4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Late embryogenesis abundant protein D-29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G031100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFL4"/>
    <dbReference type="STRING" id="3885.V7CFL4"/>
    <dbReference type="eggNOG" id="KOG4744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVGTCRP"/>
    <dbReference type="OrthoDB" id="20872at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.20">
        <property type="entry name" value="Apolipoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372">
        <property type="entry name" value="DAUER UP-REGULATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372:SF11">
        <property type="entry name" value="RE19971P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="346"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="354"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="384" mass="42456" checksum="84EAC31CCECC2781" modified="2014-02-19" version="1" fragment="single">LHPYTCVLCIYIYQHPPYPPLYSHITRYIFTDKENKTVFVDERKIERKKMGSRKLLLLLMVFFAGCVGTCRPWDDDAVEEKAEEAKKFAKGVAHDAGQSTRAFSSWVQDKFSKTFGGEEDKERHLAQHMKYNAEEAGTMKSAASGASNYASERSTDAMEAVPGAMAEGKENMYEADDGDDAKVIKLPTSFEDAKDTVGETVGQAGEKVEDIYDDAKEKFNTASDKASSMAHNAIYNMDESIGDGKDIAANAYDEGKEKMNMASEKFVDAGDKVSDVYDEARNKVKRAVGCGRKMGVDALDEAREGMNMVGDKVNDAKDNTGVTNEYGRDKVAETFDQATREVEERYASANTMTEEAKAKYEAAKERASDAAGDVGEKMRNTPNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFT9</accession>
    <name>V7CFT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ammonium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G267400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cell membrane</location>
            <topology evidence="1 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFT9"/>
    <dbReference type="SMR" id="V7CFT9"/>
    <dbReference type="STRING" id="3885.V7CFT9"/>
    <dbReference type="Gramene" id="ESW28203">
        <property type="protein sequence ID" value="ESW28203"/>
        <property type="gene ID" value="PHAVU_003G267400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0682">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVFYQFA"/>
    <dbReference type="OrthoDB" id="534912at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3430.10:FF:000005">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="entry name" value="Ammonium transporter AmtB like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002229">
        <property type="entry name" value="RhesusRHD"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00836">
        <property type="entry name" value="amt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029:SF24">
        <property type="entry name" value="AMMONIUM TRANSPORTER 2 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029">
        <property type="entry name" value="AMMONIUM TRANSPORTER MEP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00342">
        <property type="entry name" value="RHESUSRHD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111352">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="148"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="181"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="336"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="394"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium transporter AmtB-like" evidence="11">
        <location>
            <begin position="30"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="52697" checksum="A1557F41932EDFBF" modified="2014-02-19" version="1">MSSTSHGFPLPSSLLPSDASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFACVLICWVSWAHGMAFGAGLLPFVGKPSHALGGKFLLGKSRTGFFPMADFVFYQFAFAAITVVLLAGSLLGRMNFYAWMLFVPLWLTFSYTVGAFSIWDNYGFLQGKIIDYAGGFVIHLSSGIAGFTAAYWVGPRISYDRQNFPPNNIIHMLGGAGFLWMGWTGFNGGATFQVGEIASLAIFNTHLCTATSLLVWLTLDMIVYTKSSVTGAVQGMMTGLVCITPGAGLVDSWAAVLMGALSGSVPWYTMMVLHKKSAFFQSVDDTLGVFHTHAVAGLLGGVLSGVFAKPKLLRIMYSDDEQYGPGLVYSFCKGESVGEGFRQILYQLVGAGFIIVWNVVVTSLVCVLVSRIVDLRMQEEDLEVGDDAVHGEEAYALWGDGEKMRFPLRLHISPTIPSFCRRKFSIPLPKNQEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFX5</accession>
    <name>V7CFX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Glutamate receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G270900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="19" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Glutamate-gated receptor that probably acts as non-selective cation channel.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFX5"/>
    <dbReference type="SMR" id="V7CFX5"/>
    <dbReference type="STRING" id="3885.V7CFX5"/>
    <dbReference type="Gramene" id="ESW28247">
        <property type="protein sequence ID" value="ESW28247"/>
        <property type="gene ID" value="PHAVU_003G270900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28248">
        <property type="protein sequence ID" value="ESW28248"/>
        <property type="gene ID" value="PHAVU_003G270900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1052">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LVWLMKI"/>
    <dbReference type="OrthoDB" id="5984008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated monoatomic ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901701">
        <property type="term" value="P:cellular response to oxygen-containing compound"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009611">
        <property type="term" value="P:response to wounding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd13686">
        <property type="entry name" value="GluR_Plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd19990">
        <property type="entry name" value="PBP1_GABAb_receptor_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.70:FF:000037">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.190.10:FF:000054">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.190.10:FF:000175">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2300:FF:000081">
        <property type="entry name" value="Glutamate receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.10">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001828">
        <property type="entry name" value="ANF_lig-bd_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044440">
        <property type="entry name" value="GABAb_receptor_plant_PBP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019594">
        <property type="entry name" value="Glu/Gly-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015683">
        <property type="entry name" value="Ionotropic_Glu_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017103">
        <property type="entry name" value="Iontropic_Glu_rcpt_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18966">
        <property type="entry name" value="IONOTROPIC GLUTAMATE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01094">
        <property type="entry name" value="ANF_receptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00060">
        <property type="entry name" value="Lig_chan"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10613">
        <property type="entry name" value="Lig_chan-Glu_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037090">
        <property type="entry name" value="Iontro_Glu-like_rcpt_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01176">
        <property type="entry name" value="GABABRECEPTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="Periplasmic binding protein-like I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53850">
        <property type="entry name" value="Periplasmic binding protein-like II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12 13" id="KW-0407">Ion channel</keyword>
    <keyword evidence="7 13" id="KW-0406">Ion transport</keyword>
    <keyword evidence="11 13" id="KW-1071">Ligand-gated ion channel</keyword>
    <keyword evidence="8 13 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 13" id="KW-0675">Receptor</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 16" id="KW-0732">Signal</keyword>
    <keyword evidence="4 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 13" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="16">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732405" description="Glutamate receptor" evidence="16">
        <location>
            <begin position="22"/>
            <end position="939"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="594"/>
            <end position="613"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="655"/>
            <end position="679"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="835"/>
            <end position="855"/>
        </location>
    </feature>
    <feature type="domain" description="Ionotropic glutamate receptor C-terminal" evidence="17">
        <location>
            <begin position="474"/>
            <end position="815"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="14">
        <location>
            <begin position="764"/>
            <end position="818"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRNR" id="PIRNR037090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR037090-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="939" mass="104390" checksum="6E76A89138B9A224" modified="2014-02-19" version="1">MIRVELVVLMVLFEGLFSAGAVSDNSTIPALVNIGVLYSFNTSVGKMVKTAVEAAVEDVNSDPSILGQTTLKLSMQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYEMTAIADLVNYFEWREVIAVYGDDDHGRNGMGALGDKLAERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDIHSPLSSDATDDMQGVITLRMYVPDSKLKRWFVSRWTNLTTAGNSSNGTLGLSTYGIFAYDTVFALAHALDAFFKRGNQITFSHDPKLSQIRGDNMHLDAVKIFNEGNLLRKHIYEVNMTGVSGLFKYASDGNLVNPAYEIINVIGTGTRRVGYWSNYTGLSIVSPEELYSKPPNRSSASQKLLPVFWPGETTQKPRGWVFPNSGRMLRIGVPKRVSYRDFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVSYGDGDNNPSNTELVRLITADVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKMDSNAWAFLKPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGTPRQQLVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIDSLINSKEPIGYLQGSFTRTYLIEEIGIDESRLVPLKTQEETSKALNNGPQKGGVAAYVDERAYIELFLSSRCEFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLKLRSFWGLYLVCGLACILALLIYLVQTMRQYSKHGREELESSGHGSGSSRLRTFLSFVDEKEEIVKSRVKRKKIEGMSYRSTSEVGSSIISNKDYSQASSNRIDSATEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGI3</accession>
    <name>V7CGI3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pre-rRNA-processing protein TSR2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G288900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TSR2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGI3"/>
    <dbReference type="STRING" id="3885.V7CGI3"/>
    <dbReference type="Gramene" id="ESW28468">
        <property type="protein sequence ID" value="ESW28468"/>
        <property type="gene ID" value="PHAVU_003G288900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="263560at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019398">
        <property type="entry name" value="Pre-rRNA_process_TSR2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21250">
        <property type="entry name" value="PRE-RRNA-PROCESSING PROTEIN TSR2 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10273">
        <property type="entry name" value="WGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="152"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="166"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="196"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="231" mass="26079" checksum="0D4B815BFD1DFD94" modified="2014-02-19" version="1">MEGARRLQGQSIGLFNEGIGLLLFRWSALRTAVENEWGGRESRVKADQLVTDVLSWFTQSKGISIRATKHNSILWIRNSVLIFVFYCSGLCVLDPLYIDDLEDILDQGMLSLNVEVEDGSVEEVAEKLMVMHEEFLDENFSSFENLRKANLEQAARPPHTPQIVNGDEDDTDEDDDDETMSVDDNSSNKNREIPRTDSNSNSVNEPRPNVSSEADDGWVVVSNKRNKGRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGU8</accession>
    <name>V7CGU8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G001600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
            <location evidence="1">Centromere</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGU8"/>
    <dbReference type="SMR" id="V7CGU8"/>
    <dbReference type="STRING" id="3885.V7CGU8"/>
    <dbReference type="Gramene" id="ESW28583">
        <property type="protein sequence ID" value="ESW28583"/>
        <property type="gene ID" value="PHAVU_002G001600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FNHNEAI"/>
    <dbReference type="OrthoDB" id="5792673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000775">
        <property type="term" value="C:chromosome, centromeric region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042054">
        <property type="term" value="F:histone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.280.10">
        <property type="entry name" value="SRA-YDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025794">
        <property type="entry name" value="H3-K9-MeTrfase_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051357">
        <property type="entry name" value="H3K9_HMTase_SUVAR3-9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007728">
        <property type="entry name" value="Pre-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036987">
        <property type="entry name" value="SRA-YDG_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003105">
        <property type="entry name" value="SRA_YDG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660:SF46">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05033">
        <property type="entry name" value="Pre-SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02182">
        <property type="entry name" value="SAD_SRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00468">
        <property type="entry name" value="PreSET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00466">
        <property type="entry name" value="SRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50867">
        <property type="entry name" value="PRE_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51575">
        <property type="entry name" value="SAM_MT43_SUVAR39_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51015">
        <property type="entry name" value="YDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0137">Centromere</keyword>
    <keyword evidence="6" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="2" id="KW-0158">Chromosome</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YDG" evidence="14">
        <location>
            <begin position="710"/>
            <end position="853"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-SET" evidence="12">
        <location>
            <begin position="922"/>
            <end position="982"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="11">
        <location>
            <begin position="985"/>
            <end position="1128"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="13">
        <location>
            <begin position="1142"/>
            <end position="1158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="456"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="537"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="457"/>
            <end position="470"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW28583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1158" mass="127916" checksum="012862A3D48EBC65" modified="2014-02-19" version="1">MTTPENNGHCKEERYDSLMEDGHTFLLRPVYKRRKVSAIRDFPDGCGPSASRIEEVSNINIADCGSVNGTIVEVKNGEHLAGVKTCENDGWHSEPNNLLYTETLGVTVDSGLNKDNPMVSSYHVDGSTAEDRLEIGTLSQTADRGYTAEDKPGMMTISQTSDCGLNQESPVDSSHRVDGHIAEGEAAKVTLGLNQENPVVSSHQVDGSTPEDNPAKVKLGQTKDCSLNLENSEVSSHQVNGSIAEDELTKVTIVERTTDCGLNKENLVVSCRQVDSPTAEDKPAKVPSLDPETLNTEFARTSNTGKCDSSYELKSSSPAGEIAVPGDSKHLLSNANISAPSACMVEPITRRYLPQRKVSAVRDFPPLCGRNAPRVGKDKHVCLEGTSSLDNKTDGQRNLAVDDNSLKKVTATDVKEGKSNIQDEYNCNRKVVDIDQPDSERNAAERLKKLQACELSSEMKKSPENERERYATPPATSNHHQIKLNSKAVVKENNRVETKPLSISRSNHKLKGNFNRLQVSSQRKVILGLMADSECPWRSDKGSSKSKLVVGNSKGKRKKGDSFALPDRSKTDIKITGALNDSEKKPLKKKKGNAASEGMGELVLWEKDNYLEQPNECDNTLQIVLRSNEFDVNITPSSHSNFTGDENDPNVTRKKVRETLRLFQVICRKLLQEVESKLNERANSKRVDLVASRILKENGKYVNIGKQILGCVPGVEVGDEFQYRVELNIVGLHRPIQGGIDYVRHNGMILATSIVASGAYADELDNSDVLTYTGQGGNVMNNDKNPEDQKLERGNLALMNSSVEKNPVRVIRGSESMDGKCRTYVYDGLYIVESGWDEHGPHGKKIFKFRLRREAGQPELPFREVKKSKKFKTREGICVADISFGKERIPICAVNTIDDEKPPPFNYITSMIYSKFNLVLAEGCDCINGCSDSEKCSCVVKNGGEIPFNHNEAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTNTRGWGVRSLSSIPSGSFICEYIGELLEEKEAELRAGNDEYLFDIGNNYSNSALWDGLSTLMPDAQTSSCDVVKDGGFTIDAAEFGNVGRFINHSCSPNIIAQNVLSDHHDTRMPHIMFFAADNIPPLQELTYDYNYEIDQVFDSDGNIKRKYCYCGSAECTGRMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHC7</accession>
    <name>V7CHC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">LisH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G014600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHC7"/>
    <dbReference type="SMR" id="V7CHC7"/>
    <dbReference type="STRING" id="3885.V7CHC7"/>
    <dbReference type="Gramene" id="ESW28748">
        <property type="protein sequence ID" value="ESW28748"/>
        <property type="gene ID" value="PHAVU_002G014600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0273">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QINIVSW"/>
    <dbReference type="OrthoDB" id="1367865at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000118">
        <property type="term" value="C:histone deacetylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003714">
        <property type="term" value="F:transcription corepressor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.960.30:FF:000001">
        <property type="entry name" value="F-box-like/WD repeat-containing protein TBL1XR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000218">
        <property type="entry name" value="WD40 repeat-containing protein HOS15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.960.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045183">
        <property type="entry name" value="Ebi-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006594">
        <property type="entry name" value="LisH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22846:SF2">
        <property type="entry name" value="F-BOX-LIKE_WD REPEAT-CONTAINING PROTEIN EBI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22846">
        <property type="entry name" value="WD40 REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08513">
        <property type="entry name" value="LisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00667">
        <property type="entry name" value="LisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50896">
        <property type="entry name" value="LISH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="198"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="257"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="298"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="381"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="423"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="474"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="100"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="101"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="111"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW28748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="550" mass="61571" checksum="6FADD6DC26A565EF" modified="2014-02-19" version="1">MSTITSVELNYIVFRYLHESGFIHTAFAFGNEAGINKISIDGTLVPIGALIRLVQKGLQYLEMEANLSNCDINLDEDFSFLQPLELITKDVHELGKMVNERRKKLHKDRNKKSEKEHEGGRGWVKGKERHERAKECEKDRDQAENLKELEQKRGNQTSKELVTDQEQNKAFGGPERMDISTVLTPQPCEIRRSDVMVLEGHTSEVCACAWSPTGSLLASGSGDSTARIWSIPEGRCKSASLSDPPNVFVLKHVRGKTNEKSNDVTTLDWNGEGTLLATGSYDGQARIWTTNGELSSILSKHKGPIFSLKWNKKGDYLLTGSCDQSAIVWDVKAVKWKQQFEFHSGWTLDVDWRNNVSFATSSTDTKIHVCKIGENLPIKTFVGHQSEVNCIKWDPTGSLLASCSDDMTAKVWSMKHDKYLHDFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELGKLVYNLNGHGDRVYSVAFSPNGEYLASGSPDKSMLIWSLKEGKIVKTYSGDGGIFEVCWNKEGNKIAACFANNTVCVLDFRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHD0</accession>
    <name>V7CHD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G084700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHD0"/>
    <dbReference type="SMR" id="V7CHD0"/>
    <dbReference type="STRING" id="3885.V7CHD0"/>
    <dbReference type="Gramene" id="ESW29612">
        <property type="protein sequence ID" value="ESW29612"/>
        <property type="gene ID" value="PHAVU_002G084700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYTECND"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000404">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000427">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF488">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="90"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="191"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="292"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="507"/>
            <end position="600"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW29612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="600" mass="67158" checksum="1885D098FAAF835C" modified="2014-02-19" version="1">MAVSILQCISHSPTKLNTEVELEPSTSLLSLIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCNPTTASMDYAHQMFDQIPQPDIVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFSSLFKACARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYTACNDMDAARRVFDKIDEPCVVAYNAIISSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGKWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMIVGYATHGHGYQALSMLEEMKKEKVQPDEISFLGILYACSHNGLIDEGYDHFHSMTHEYGIVPSIKHYGCMVDLLGRAGRLEEAYKFIDELPTKPTPILWRTLLSSCSSHGNVEMAKQVIQRIFELDDSHGGDYVILSNLCARNGSWDDVNYVRKRMADKGALKVPGVSSIEVNNVVHEFFSGDGVHSTSTVLHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJI1</accession>
    <name>V7CJI1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl reductase (ER) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G144600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJI1"/>
    <dbReference type="SMR" id="V7CJI1"/>
    <dbReference type="STRING" id="3885.V7CJI1"/>
    <dbReference type="Gramene" id="ESW30337">
        <property type="protein sequence ID" value="ESW30337"/>
        <property type="gene ID" value="PHAVU_002G144600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0023">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYCPKMI"/>
    <dbReference type="OrthoDB" id="1879366at2759"/>
    <dbReference type="PhylomeDB" id="V7CJI1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009809">
        <property type="term" value="P:lignin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd05283">
        <property type="entry name" value="CAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000022">
        <property type="entry name" value="Cinnamyl alcohol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000100">
        <property type="entry name" value="Putative cinnamyl alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047109">
        <property type="entry name" value="CAD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42683">
        <property type="entry name" value="ALDEHYDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Enoyl reductase (ER)" evidence="7">
        <location>
            <begin position="25"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW30337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="38307" checksum="407CEB59793D0319" modified="2014-02-19" version="1">MSNVLAGCENEEVVTYGWAARDDSGILSPFHFTRRANGDNDITLDILYSGICHTDLHMVKDDFGMSIYPMVPGHEIVGKVTKVGSKVTKFSVGDIAGVGGSVGSCGSCSDCSEGFYVYCPKMILTYSARYHDGTVTQGGYSDNLVVDHNFAVLIPKSMPLASTAPLLCAGITVYSPLKYHGLTKPGLHLGVVGLGGLGHVAVKFAKAFDMHVTVISTSPSKKKEALERLGADAFLVSRDQQQLQDAVGTMDAILDTVSANHSIQSLIGLLKTSGKLILVGGPANPLEVLAMPLLLGRKMIAGSAGGGREEIQEMINFAAKHHITADVEVISMDYVNTALERLEKNDVKYRFVIDVANTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJL9</accession>
    <name>V7CJL9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G074400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJL9"/>
    <dbReference type="STRING" id="3885.V7CJL9"/>
    <dbReference type="Gramene" id="ESW29490">
        <property type="protein sequence ID" value="ESW29490"/>
        <property type="gene ID" value="PHAVU_002G074400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXVQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LYWPIPA"/>
    <dbReference type="OrthoDB" id="747498at2759"/>
    <dbReference type="PhylomeDB" id="V7CJL9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025322">
        <property type="entry name" value="PADRE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33413:SF4">
        <property type="entry name" value="D-RIBOSE-BINDING PERIPLASMIC PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33413">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14009">
        <property type="entry name" value="PADRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="105"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="118"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="172" mass="19178" checksum="763890E71E00A55A" modified="2014-02-19" version="1">MGNCQAVDAAVLVIQHPCGKIERLYWPVTASEVMRTNPGHYVSLIIPLPVPPQDQNQDQKTVRFTRVKLLRPNETLNLGHAYRLITTQEVMKVLKAKKHAKTRKPQAETVEKAHTIQPEKQSSASEPHTGGESTHQGTRAERHRPRANSANPAVVRSKSWRPSLQSISESAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKG0</accession>
    <name>V7CKG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Son of sevenless</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G168800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKG0"/>
    <dbReference type="STRING" id="3885.V7CKG0"/>
    <dbReference type="Gramene" id="ESW30624">
        <property type="protein sequence ID" value="ESW30624"/>
        <property type="gene ID" value="PHAVU_002G168800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRVB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFSCRSF"/>
    <dbReference type="OrthoDB" id="1926790at2759"/>
    <dbReference type="PhylomeDB" id="V7CKG0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33133:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33133">
        <property type="entry name" value="OS08G0107100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="173"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="211"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="265"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="304"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="357" mass="39345" checksum="8332CDA262B2E55D" modified="2014-02-19" version="1">MEISSGGCSPRIRSEYPRKEGSEGTPVKRFELSDRDRNYEMQSMNALDILRETVRILRFNSWGFVAIAVMLICPVSAVLLSNVIVDMTIVKNLSIRLMLVAQASGLPLRPIIKQSCQRFAETVVSSAMCFPLYSTLLLLSKAGIVYSVDCTYSRKKFDASKFCVIVSKIWRKILFTYLWGCALVVGCITLFCVFLVAFCSALAVLRFSPDIVVYCAMMVGLVFSVVFANAIIICNISIVISVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGMAFVEGLFEHRVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSSLEISDCEGNSILETMTISAESIGIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKL2</accession>
    <name>V7CKL2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Carbonic anhydrase</fullName>
            <ecNumber evidence="2 7">4.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Carbonate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G071200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Reversible hydration of carbon dioxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 7">
            <text>hydrogencarbonate + H(+) = CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:10748"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="EC" id="4.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the beta-class carbonic anhydrase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.1" evidence="2 7"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKL2"/>
    <dbReference type="SMR" id="V7CKL2"/>
    <dbReference type="STRING" id="3885.V7CKL2"/>
    <dbReference type="Gramene" id="ESW29451">
        <property type="protein sequence ID" value="ESW29451"/>
        <property type="gene ID" value="PHAVU_002G071200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1578">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10248475at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015976">
        <property type="term" value="P:carbon utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00884">
        <property type="entry name" value="beta_CA_cladeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1050.10:FF:000002">
        <property type="entry name" value="Carbonic anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1050.10">
        <property type="entry name" value="Carbonic anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045066">
        <property type="entry name" value="Beta_CA_cladeB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001765">
        <property type="entry name" value="Carbonic_anhydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015892">
        <property type="entry name" value="Carbonic_anhydrase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036874">
        <property type="entry name" value="Carbonic_anhydrase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002:SF78">
        <property type="entry name" value="BETA CARBONIC ANHYDRASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002">
        <property type="entry name" value="CARBONIC ANHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00484">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00947">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53056">
        <property type="entry name" value="beta-carbonic anhydrase, cab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00704">
        <property type="entry name" value="PROK_CO2_ANHYDRASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00705">
        <property type="entry name" value="PROK_CO2_ANHYDRASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR601765-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="30319" checksum="8F5D5555952E4E70" modified="2014-02-19" version="1">MAGALKKCMMLCCTSKIVSKEEMAGESYEEAIASLTKLLSEKAELGEVATAKIKDLTAELDAAGSKPFNPEERIRTGFISFKNEKFAKNPDLYGELAQGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICTPARSKVKAETSDLSFAEQCTNCEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGNFELWDLNFKLLPSVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMK4</accession>
    <name>V7CMK4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G233000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMK4"/>
    <dbReference type="SMR" id="V7CMK4"/>
    <dbReference type="Gramene" id="ESW31369">
        <property type="protein sequence ID" value="ESW31369"/>
        <property type="gene ID" value="PHAVU_002G233000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0055">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GYFRLAM"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010329">
        <property type="term" value="F:auxin efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010328">
        <property type="term" value="F:auxin influx transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd18577">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18578">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03249">
        <property type="entry name" value="ABC_MTABC3_MDL1_MDL2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1560.10:FF:000009">
        <property type="entry name" value="ABC transporter B family member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000066">
        <property type="entry name" value="ABC transporter B family member 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24222">
        <property type="entry name" value="ABC TRANSPORTER B FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24222:SF50">
        <property type="entry name" value="ABC TRANSPORTER B FAMILY MEMBER 9-LIKE ISOFORM X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="189"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="283"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="683"/>
            <end position="707"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="727"/>
            <end position="750"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="801"/>
            <end position="822"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="828"/>
            <end position="847"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="14">
        <location>
            <begin position="46"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="13">
        <location>
            <begin position="347"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="14">
        <location>
            <begin position="687"/>
            <end position="913"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="13">
        <location>
            <begin position="954"/>
            <end position="1191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="587"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="587"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="608"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="623"/>
            <end position="635"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW31369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1197" mass="130010" checksum="930D2BFEBA369470" modified="2014-02-19" version="1">MSHNTEVPTSSMSTQHHEKEEKANQKVPFYKLFTFADPLDVALMTIGTICAMANGWSQPIMTLILGKLINTFGSTDPSNTIKEVSKVSLLFVYLAIAIGVVSFLQVACWMVTGERQAPRIRSLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDSMGEKVGKFIQLASTFIGGFVIAFVRGWQLAVILLSCIPCVVVTGGILSMLMTKMSSRGQAAYSEAGTVAEQTVGSIRTVAYKTMVLQGMASGFGLGVLMLIIFCTYALAMWYGSKLVIEKGYNGGTVITVIVALMTGGISLGQTSPCLNAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVMEDIRGDIELRDVYFSYPARKNVQIFSGFSLYVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGINLKNFQVRWIREQIGLVSQEPILFAASIKENIIYGKEGATDEEIKSAITLANAKTFIDKLPQGLETMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALEQAMSKRTTVVVAHRLTTIRNADTIAVVHQGKIVEEGTHDELIKDVDGAYSQLIRLQEGAKEAKGSNNSEAEKSSNKVNLDSNIARSSTQREVSLNRGSSSRHSQSHSFALSHRSWVHESVEVEKYGDVEKSKVDTKKPNKVSLRRLAYLNKPEVPVLVVGSVAAIIHGLVFPLFGFLFSSAITMFFEPPEKQRKDSRFWALLYVGLGLVTLVVIPIQNYFFGVAGGKLVERIRSLTFEKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNLSTIISGLVISFTANWILAFIILAVSPLVLIQGFLQMKFLKGFSADAKVKYEEASQVANEAVGSIRTIASFCAESKVMDMYRKKCLEPEKQGVRLGLTSALAPDTNKAKDCAASIFNILDSTPTIDSSNTQGRTLEAIAGDIELQHVCFNYPTRPHIQIFKDLCLSILAGKTVALVGESGSGKSTVISLLERFYNPHTGRILLDGVDIKEFRLSWLRQQMGLVGQEPILFNDSIRANIAYGKEGVATEEEISAAAKASNAHQFICALPEGYDTSVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESEKVVQEALDRVSVNRTTVVVAHRLTTIRGADMIAVMKNGAVAEKGRHDELMMINDGVYASLVALHMSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS81</accession>
    <name>V7CS81_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Mediator of RNA polymerase II transcription subunit 28</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G266700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Mediator complex subunit 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS81"/>
    <dbReference type="SMR" id="V7CS81"/>
    <dbReference type="STRING" id="3885.V7CS81"/>
    <dbReference type="Gramene" id="ESW31776">
        <property type="protein sequence ID" value="ESW31776"/>
        <property type="gene ID" value="PHAVU_002G266700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ9Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EDMISWV"/>
    <dbReference type="OrthoDB" id="1885414at2759"/>
    <dbReference type="PhylomeDB" id="V7CS81"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016592">
        <property type="term" value="C:mediator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034456">
        <property type="entry name" value="MED28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021640">
        <property type="entry name" value="Mediator_Med28"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39117">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39117:SF1">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11594">
        <property type="entry name" value="Med28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="92"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="141" mass="16357" checksum="8787C14DFE1567E8" modified="2014-02-19" version="1">MGDRQVIEQQHIGDPQLPSSPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRYARDFMEAAKKLQLYFISLQREDKPTKVEMLRKEIALMEEELNIKDELIKKQENLIQEWKKGLKDQLDKHKTELNKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSE9</accession>
    <name>V7CSE9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G308500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSE9"/>
    <dbReference type="STRING" id="3885.V7CSE9"/>
    <dbReference type="Gramene" id="ESW32278">
        <property type="protein sequence ID" value="ESW32278"/>
        <property type="gene ID" value="PHAVU_002G308500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0409">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFYADVQ"/>
    <dbReference type="OrthoDB" id="435038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="entry name" value="N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="HIBADH-like_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43060">
        <property type="entry name" value="3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43060:SF15">
        <property type="entry name" value="3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="6-phosphogluconate dehydrogenase NADP-binding" evidence="4">
        <location>
            <begin position="40"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="3-hydroxyisobutyrate dehydrogenase-like NAD-binding" evidence="5">
        <location>
            <begin position="202"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW32278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="335" mass="35060" checksum="801DE72A0D1A34D3" modified="2014-02-19" version="1">MPLPSLQLNLRFLHHRIHHHHSFTVRHFMAAAPVSPSNTRVGWIGTGVMGHSMCAHLIRAGYTLTVFNRTASKAQPLVDLGAHFASSPHAVAARSDVVFSIVGYPSDVRSVLLHPTSGALAALRPGGVLVDMTTSEPSLAAEIAAAAAAKGCHSVDAPVSGGDRGAKNGTLAIFAGGEESTVKNLEPLFSVLGKVNYMGGSGKGQFAKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYLEAISSGAAGSKSLELYGKRILKRDFEAGFFVNHFVKDLGICLKECENMGIALPGLALAQQLYLSLKAHGEGLLGTQALILVLERLNNASLPPSNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTA2</accession>
    <name>V7CTA2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G327000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTA2"/>
    <dbReference type="SMR" id="V7CTA2"/>
    <dbReference type="STRING" id="3885.V7CTA2"/>
    <dbReference type="Gramene" id="ESW32495">
        <property type="protein sequence ID" value="ESW32495"/>
        <property type="gene ID" value="PHAVU_002G327000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSU6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWCRCRQ"/>
    <dbReference type="OrthoDB" id="44190at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35690">
        <property type="entry name" value="OS01G0363500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35690:SF1">
        <property type="entry name" value="OS01G0363500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW32495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="260" mass="29299" checksum="08DD6E991CE4312E" modified="2014-02-19" version="1">MATNSMHMLYVSSFSLCFPNSSSFQLSKLSPQFKPLNSTPLSGRKHCKVVRFPRERTRTRATLDDVETDQLSSTPLVENEKAKKDVDESVKVLKDAAKTRKVAAEDVLSALSIIEKAKLDPSGFFETLGGNKSPGRTWMLVFTAEKKLSGGRYFPLTAVQRFDATAKRIENGVYLGPIGQLTFEGRLSWKKRILAFVFENIRVKLGPFQPLEISLGKKEDREPDTKDPFFIWFYVDEEIAVARGRSGGTAFWCRCSRVNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUH5</accession>
    <name>V7CUH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Purple acid phosphatase</fullName>
            <ecNumber evidence="10">3.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G332100g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>a phosphate monoester + H2O = an alcohol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15017"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:67140"/>
            <dbReference type="EC" id="3.1.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
        <text evidence="11">Binds 2 iron ions per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.2" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUH5"/>
    <dbReference type="SMR" id="V7CUH5"/>
    <dbReference type="STRING" id="3885.V7CUH5"/>
    <dbReference type="Gramene" id="ESW32556">
        <property type="protein sequence ID" value="ESW32556"/>
        <property type="gene ID" value="PHAVU_002G332100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2679">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LESRWVC"/>
    <dbReference type="OrthoDB" id="411211at2759"/>
    <dbReference type="PhylomeDB" id="V7CUH5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030643">
        <property type="term" value="P:intracellular phosphate ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042542">
        <property type="term" value="P:response to hydrogen peroxide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd07378">
        <property type="entry name" value="MPP_ACP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.21.10:FF:000027">
        <property type="entry name" value="Purple acid phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024927">
        <property type="entry name" value="Acid_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051558">
        <property type="entry name" value="Metallophosphoesterase_PAP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10161">
        <property type="entry name" value="TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10161:SF14">
        <property type="entry name" value="TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000898">
        <property type="entry name" value="Acid_Ptase_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 11" id="KW-0408">Iron</keyword>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 12" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756180" description="Purple acid phosphatase" evidence="12">
        <location>
            <begin position="17"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="13">
        <location>
            <begin position="38"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000898-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW32556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="37013" checksum="1BA9FFFCB2D8FD0A" modified="2014-02-19" version="1">MSISFLLTLFITSSLSSLSAYAQLLRFSHSSKHDASLSFLVLGDWGRRGAFNQSQVAFQMGKVGERLDIDFVVSTGDNFYDNGLISEHDNAFAESFTKIYTAESLQKQWYSVLGNHDYRGDAEAQLSPVLREMDSRWLCLRSFIVDSELVDIFFVDTTPFVEKYFTEPQKHKYDWGGIGPQKPYITNLLKDLELALKESRAQWKIVVGHHTIRSVGHHGDTQELVEKLLPILQANNIDFYMNGHDHCLEHISDTESPIQFLTSGAGSKAWSGDLQQMNRRGLNFFYDGQGFMSVQLTQTHATIEFYDVFGNVLHTLASSKQPHSFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUS9</accession>
    <name>V7CUS9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADP-dependent glyceraldehyde-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="6">1.2.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glyceraldehyde-3-phosphate dehydrogenase [NADP(+)]</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Triosephosphate dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G045700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>D-glyceraldehyde 3-phosphate + NADP(+) + H2O = (2R)-3-phosphoglycerate + NADPH + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:14669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="1.2.1.9"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.9" evidence="6"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUS9"/>
    <dbReference type="SMR" id="V7CUS9"/>
    <dbReference type="STRING" id="3885.V7CUS9"/>
    <dbReference type="Gramene" id="ESW33133">
        <property type="protein sequence ID" value="ESW33133"/>
        <property type="gene ID" value="PHAVU_001G045700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2450">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFIGTHK"/>
    <dbReference type="OrthoDB" id="310895at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008886">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008911">
        <property type="term" value="F:lactaldehyde dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd07082">
        <property type="entry name" value="ALDH_F11_NP-GAPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.309.10:FF:000016">
        <property type="entry name" value="NADP-dependent glyceraldehyde-3-phosphate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.605.10:FF:000013">
        <property type="entry name" value="NADP-dependent glyceraldehyde-3-phosphate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="entry name" value="Aldehyde Dehydrogenase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051020">
        <property type="entry name" value="ALDH-related_metabolic_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42991">
        <property type="entry name" value="ALDEHYDE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42991:SF11">
        <property type="entry name" value="NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldehyde dehydrogenase" evidence="14">
        <location>
            <begin position="24"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00040853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00042470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00042646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00043052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW33133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="53045" checksum="52B8C3668CDE90BA" modified="2014-02-19" version="1">MAGTGTFGEIIDGDVFKYYAQGHWNKSSSGKSVPIINPSTRKTQFKVQACTQEEVNRVMESAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLISYCAEEGVRILGEGKLLVSDSFPGNDRTKCCLSSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKDLISCVTGKGSEIGDFLTMHSGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLAAANMVKGGFSYSGQRCTAVKVVLVIESVANTLVKKINDKVAKLTVGPPEKDSDITPVVTESSANFIEGLVKDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIKSVDEGINHCNASNFGLQGCVFTRDINKAMLISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKTTVINLPAASYTMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW49</accession>
    <name>V7CW49_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G144400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW49"/>
    <dbReference type="SMR" id="V7CW49"/>
    <dbReference type="STRING" id="3885.V7CW49"/>
    <dbReference type="Gramene" id="ESW34344">
        <property type="protein sequence ID" value="ESW34344"/>
        <property type="gene ID" value="PHAVU_001G144400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RERW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHDSVKC"/>
    <dbReference type="OrthoDB" id="276388at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37217">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37217:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW34344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="260" mass="28612" checksum="076804EA5D810368" modified="2014-02-19" version="1">MNSVSLTSFLSIPSPPCNFHSLLQSKHQPFMHTLSSTLLTLSPISLTPKPVLRRATDSNIDAPISLPEGASFVSIPELDEKDWSVLDCDEDRSVERILSAGKVQEGSRVLVSAGSEHFVDSLAGLNSSLFVVHDSLLVLACIKEKYDKVKCWQGEIIYVPEKWAPFDAVFLYFLPALPFKLEQILGSLAGKCAPGGRVIISHPKGREVLEQQRQQYPDLVVSDLPDKTYLQSAAAAHSFDVAEFVDEPGLYLAVLIFSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWQ1</accession>
    <name>V7CWQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G098700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWQ1"/>
    <dbReference type="SMR" id="V7CWQ1"/>
    <dbReference type="STRING" id="3885.V7CWQ1"/>
    <dbReference type="Gramene" id="ESW33788">
        <property type="protein sequence ID" value="ESW33788"/>
        <property type="gene ID" value="PHAVU_001G098700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0SB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVSYQVC"/>
    <dbReference type="OrthoDB" id="1068731at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04051">
        <property type="entry name" value="C2_SRC2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044750">
        <property type="entry name" value="C2_SRC2/BAP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246">
        <property type="entry name" value="INGRESSION PROTEIN FIC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246:SF169">
        <property type="entry name" value="PROTEIN SRC2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="288" mass="32228" checksum="6AAC42F335C5FFDD" modified="2014-02-19" version="1">MEPEPRCMEVKLISCKDLRAFNFFQKLTVYATVFIDSEDPKREMTEERRQRQRTLTHRESDDDGSNPDWNHNVRFDLGWLSHSPRHSDYDDLFLCFEFRHDGLILGDKVVGECRVPFTGLIRDATAGTARFVSYEVRSAEGKPNGIFNFSYKLTGIGIGIGIGNGSGSGTHSSQILQGRISGYPVLAPEDCACAPNRVQYPTCEINNTCCYPTVALPVGSPVYPAAAPPPPAMLPPYGEYHFNYPHPPPPPPVAYPYPPPPPPAVHAYPHFGPEAHPWLQGPYCERRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXA3</accession>
    <name>V7CXA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G182900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXA3"/>
    <dbReference type="SMR" id="V7CXA3"/>
    <dbReference type="Gramene" id="ESW34806">
        <property type="protein sequence ID" value="ESW34806"/>
        <property type="gene ID" value="PHAVU_001G182900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34807">
        <property type="protein sequence ID" value="ESW34807"/>
        <property type="gene ID" value="PHAVU_001G182900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RISFYGV"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000047">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000071">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047:SF21">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW34807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="54984" checksum="A6CD74012288077E" modified="2014-02-19" version="1">MASQESQLHFVLFPLMAPGHMLPMTDLATILAQNNMIVTVVTTVHNASRFSETFARASDSGLNLRLVQLQFPSHHAGFPEGCENFDMLPSMGMGLNFFLAANTILHEPAEKVFEQLTPKPNCIISDVSLAYTAHIATKFNVPRISFYGVSCFCLWWQQKLATSKVFEKVATDSEYFSIPDIPDKVEITKAQTPRPMHENWSEFVEKMAAAEAITYGVVVNSFEELEQVYARDFKKARNDKVWFVGPVSLRNRNHLDKAQRGNNNNTSSDAHSCMKWLDLQNPNSVIYVCLGSLCNLSPLQLIELGMALEASQIPFIWVIRERSQTEELMKWIKEWGFEERTKGVGLMLLGWSPQVLILSHPAIGGFITHCGWNSTLEAISFGVPMLTWPLFGDQFFNERFVVNVIRIGVSVGVESPVLWGDEEKTGVLVKKEDVVRAIEKLMDEGSESEGRRKRARELAEMAKTAVEGGSSHFNVTQLIKDIMQQSTKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXX9</accession>
    <name>V7CXX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G095600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Potential calcium sensor that binds calcium in vitro.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXX9"/>
    <dbReference type="SMR" id="V7CXX9"/>
    <dbReference type="STRING" id="3885.V7CXX9"/>
    <dbReference type="Gramene" id="ESW33746">
        <property type="protein sequence ID" value="ESW33746"/>
        <property type="gene ID" value="PHAVU_001G095600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEVMIAR"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000237">
        <property type="entry name" value="Calcium-binding protein CML38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="2"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="38"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="74"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="110"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00057710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW33746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="140" mass="15774" checksum="B68964DC2BEFD4D2" modified="2014-02-19" version="1">MDKLRQYERVFKQFDENGDGKISAWELQQCVEAMGEELSAADAAATVTAMDADGDGMVGFDDFVRFVEGGKEEEKENDLKEAFKMYEMEESGCITPRSLKMMLSRLGESTSIDECEVMIARFDLDGDGVLTFDEFKVMML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="72" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYD6</accession>
    <name>V7CYD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15 17">DNA replication licensing factor MCM7</fullName>
            <ecNumber evidence="3 17">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">MCM7</name>
        <name evidence="19" type="ORF">PHAVU_001G212600g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="17">Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.</text>
    </comment>
    <comment type="function">
        <text evidence="13">Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 17">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="14">Component of the minichromosome maintenance (MCM) complex, a heterotetramer composed of MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 17">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the MCM family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3 17"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYD6"/>
    <dbReference type="SMR" id="V7CYD6"/>
    <dbReference type="STRING" id="3885.V7CYD6"/>
    <dbReference type="Gramene" id="ESW35167">
        <property type="protein sequence ID" value="ESW35167"/>
        <property type="gene ID" value="PHAVU_001G212600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0482">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AQHVTYV"/>
    <dbReference type="OrthoDB" id="3207464at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042555">
        <property type="term" value="C:MCM complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000347">
        <property type="term" value="C:THO complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017116">
        <property type="term" value="F:single-stranded DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006271">
        <property type="term" value="P:DNA strand elongation involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000727">
        <property type="term" value="P:double-strand break repair via break-induced replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd17758">
        <property type="entry name" value="MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.28.10:FF:000004">
        <property type="entry name" value="DNA replication licensing factor MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1640.10:FF:000013">
        <property type="entry name" value="DNA replication licensing factor MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000835">
        <property type="entry name" value="DNA replication licensing factor MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1640.10">
        <property type="entry name" value="mini-chromosome maintenance (MCM) complex, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008050">
        <property type="entry name" value="MCM7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018525">
        <property type="entry name" value="MCM_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027925">
        <property type="entry name" value="MCM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF26">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14551">
        <property type="entry name" value="MCM_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01663">
        <property type="entry name" value="MCMPROTEIN7"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00847">
        <property type="entry name" value="MCM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 17" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 17" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9 16" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 17" id="KW-0347">Helicase</keyword>
    <keyword evidence="6 17" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10 17" id="KW-0539">Nucleus</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="18">
        <location>
            <begin position="328"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00053280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00066054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00073503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU365012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW35167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="720" mass="80979" checksum="F00D77841A980488" modified="2014-02-19" version="1">MATKDLDFKADTALAKEFLSNFADANGEAKYLNILQDVANHKTKAVQIDLEDLINYKDLDEEFLRRVTENTRRYIGIFSNAVDELMPESTEAFTDDDHDILMTQRSDEAGEGVDGFDPLQKMPPEIKRYYELYIKASSKGRPFTIREVKASNIGQLVRISGIVTRCSDVKPLMKVAVYTCEDCGFEIYQEVTARVFMPLFECPSKRCDTNRRKGNVILQLRASKFLRFQEAKIQELADHVPKGHIPRTMTVHLRGELTRKVAPGDVVEFSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKRKYEEYELRGDEEEQIARLAEDGDIYNKLSRSLAPEIFGHDDIKKALLLLLVGAPHRTLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPHALLSRFDLLWLILDRADMDNDLEMARHVVYVHQNKECPALGFTPLEPSVLRAYISAARRLSPSVPRELEEYIATAYSSIRQEEARSNAPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAISDIYSILRDEAARGNRVDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZC7</accession>
    <name>V7CZC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_001G137300g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZC7"/>
    <dbReference type="SMR" id="V7CZC7"/>
    <dbReference type="Gramene" id="ESW34251">
        <property type="protein sequence ID" value="ESW34251"/>
        <property type="gene ID" value="PHAVU_001G137300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPLCRVP"/>
    <dbReference type="OrthoDB" id="2015831at2759"/>
    <dbReference type="PhylomeDB" id="V7CZC7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:001528">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000516">
        <property type="entry name" value="Leucine-rich repeat family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000388">
        <property type="entry name" value="Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000534">
        <property type="entry name" value="Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050994">
        <property type="entry name" value="At_inactive_RLKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48010:SF55">
        <property type="entry name" value="OS01G0607900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48010">
        <property type="entry name" value="OS05G0588300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0675">Receptor</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 14" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756296" description="Protein kinase domain-containing protein" evidence="14">
        <location>
            <begin position="26"/>
            <end position="884"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="532"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="593"/>
            <end position="864"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW34251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="884" mass="95772" checksum="63B370E5BD3DDE0F" modified="2014-02-19" version="1">MATTTFCTYLFLLSVSISIFNLCSSSSEGDILLSFKASIEDSKKALSTWSNTSSNHHCNWTGITCSATPLLSVTSINLQSLNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSDCSSLETLNLSTNLIWGTIPSQISQFASLRVLDLGRNHIEGKIPESLGSLKNLQVLNMGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPKDIGELGNLKQLLLQSSSFQGKIPDSLVGLVSLTHLDLSENNLTGGVPQALPSSLKNLVSLDVSTNKLLGPFPSGICKGEGLINLGLHSNAFNGSIPNSIEECKSLERFQVQNNAFSGDFPISLWSLPKIKLIRVENNRFSGQIPESISGAVQLEHVQLDNNSFAGKIPQGLGFVKSLYRFSASLNLLDGEIPPNFCDSPVMSIVNLSHNSLSGKIPALKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLDGNPGLCGPGLPNSCSDDMPRRHIGSLTTLACALISLAFVVGTAIVVGGFILYRGYCKGNQVGVWRSVFFYPLRITEHDLLVGMNEKNSMGNGGFFGRVYVVSLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISRQNFELQWVVRLRIAIGVAQGLAYLHKDYLPHLLHRNVKSSNILLDANFEPKLTDFALDRVVGEASFQSILNSEAASSCYIAPENGYSKKATEQLDIYSFGVVLLELVSGRQAEQTESIDSVDIVKWVRRKVNIANGVHQVLDPKISNTCHQEMIGALDIALRCTSVVPEKRPSMVEVVRSLQSLESRTCNANMLEPNEEPSVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2012-04-18" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>H6WP29</accession>
    <name>H6WP29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">allantoinase</fullName>
            <ecNumber evidence="6">3.5.2.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_006G186700g</name>
    </gene>
    <organism evidence="14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2011-12" db="EMBL/GenBank/DDBJ databases">
            <title>Developmental effect on ureide levels are mediated by tissue-specific regulation of allantoinase in Phaseolus vulgaris L.</title>
            <authorList>
                <person name="Alamillo J.M."/>
                <person name="Galvez-Valdivieso G."/>
                <person name="Diaz-Leal J.L."/>
                <person name="Coleto I."/>
                <person name="Robles M."/>
                <person name="Pineda M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(S)-allantoin + H2O = allantoate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17029"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15678"/>
            <dbReference type="ChEBI" id="CHEBI:17536"/>
            <dbReference type="EC" id="3.5.2.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Nitrogen metabolism; (S)-allantoin degradation; allantoate from (S)-allantoin: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.5" evidence="6"/>
    <dbReference type="EMBL" id="JQ277455">
        <property type="protein sequence ID" value="AEZ56935.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="H6WP29"/>
    <dbReference type="SMR" id="H6WP29"/>
    <dbReference type="STRING" id="3885.H6WP29"/>
    <dbReference type="Gramene" id="ESW20171">
        <property type="protein sequence ID" value="ESW20171"/>
        <property type="gene ID" value="PHAVU_006G186700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SRLHVCH"/>
    <dbReference type="OrthoDB" id="10258955at2759"/>
    <dbReference type="UniPathway" id="UPA00395">
        <property type="reaction ID" value="UER00653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004038">
        <property type="term" value="F:allantoinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000256">
        <property type="term" value="P:allantoin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006145">
        <property type="term" value="P:purine nucleobase catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.140:FF:000032">
        <property type="entry name" value="Allantoinase Dal1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017593">
        <property type="entry name" value="Allantoinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056854">
        <property type="entry name" value="ALN_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050138">
        <property type="entry name" value="DHOase/Allantoinase_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03178">
        <property type="entry name" value="allantoinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43668">
        <property type="entry name" value="ALLANTOINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43668:SF2">
        <property type="entry name" value="ALLANTOINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24890">
        <property type="entry name" value="ALN_composite"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="Composite domain of metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="Metallo-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="8 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="Allantoinase composite" evidence="13">
        <location>
            <begin position="46"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Amidohydrolase-related" evidence="12">
        <location>
            <begin position="101"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00053421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF24890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="AEZ56935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW20171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="508" mass="56240" checksum="2B29E967438BDD72" modified="2012-04-18" version="1">MERFVWRVLPFLTFLVSFIVFFYLQDSYRAQLHPQVKLTENKCSLLHHRHFWITSKRIVTPQGIISGSVEIKEGNIISVIEGYGKQGNSKHEEVIDYGDAVVMPGLIDVHVHLDEPGRTAWEGFDTGTRAAAAGGVTTVVDMPLNNHPTTVSKETLKLKLEAAENRIYVDVGFWGGLIPENALNTSILEGLLSAGVLGLKSFMCPSGISDFPMTTIHHIKEGLSVLAKYRRPLYVHSEIQQHLELTDKGGPRTYLTYLHTRPPSWEEAAIKELVGVTKDTRIGGPLEGAHVHIAHLSDSSASLDLIKEAKSRGDSISVETCPHYLAFSSEEIPNGDTRFKCSPPIRDAYNKGKLWKAVLEGHIDLLSSDHSPTLPQLKLLEEGDFLKAWGGISSLQFDLPVTWSYGKKHGLTLEHLSLLWSKKPATFAGIESKGSIAVGNHADIVVWKPEVEFELNEHYPVFLKHPSLSAYMGRRLSGEVLETFVRGNLVFKKGKHAPAACGVPILAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2003-06-01" modified="2026-01-28" version="91" xmlns="https://uniprot.org/uniprot">
    <accession>Q84L99</accession>
    <name>Q84L99_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative organic cation transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G142000g</name>
    </gene>
    <organism evidence="8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2003" name="Plant Mol. Biol." volume="51" first="341" last="349">
            <title>Characterization of the expression of Phaseolus vulgaris OCT1, a dehydration-regulated gene that encodes a new type of phloem transporter.</title>
            <authorList>
                <person name="Torres G.A."/>
                <person name="Lelandais-Briere C."/>
                <person name="Besin E."/>
                <person name="Jubier M.F."/>
                <person name="Roche O."/>
                <person name="Mazubert C."/>
                <person name="Corre-Menguy F."/>
                <person name="Hartmann C."/>
            </authorList>
            <dbReference type="PubMed" id="12602865"/>
            <dbReference type="DOI" id="10.1023/A:1022014229899"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="8">Roots</tissue>
        </source>
    </reference>
    <reference evidence="9" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="AF402773">
        <property type="protein sequence ID" value="AAO83155.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="Q84L99"/>
    <dbReference type="SMR" id="Q84L99"/>
    <dbReference type="STRING" id="3885.Q84L99"/>
    <dbReference type="Gramene" id="ESW24574">
        <property type="protein sequence ID" value="ESW24574"/>
        <property type="gene ID" value="PHAVU_004G142000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0255">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DAYFNCF"/>
    <dbReference type="OrthoDB" id="3936150at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24064">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 22 MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="332"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="364"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="393"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="433"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="464"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="493"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="7">
        <location>
            <begin position="44"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="302"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="302"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AAO83155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW24574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="547" mass="60239" checksum="4CAB5CC1D3EC012F" modified="2003-06-01" version="1">MMEEEQKLVKGGTNLEGSEAKLELTVDEVVEEYVGSLGFSQLVHVLLVSLAWIFDAQSTLVTIFSDAQPSAWRCKSGFCNNSSSSSSTGSVCELVPGTWEWVGGHTSSIIAEWNLICDRRFLAAVPASVYFLGSLIGSGVYGHLSDTWLGRKRSVQLSCILTSITAFATSLSPNIWTYAFFRFTNGFARSGIGICCLVLTTESVGRKWRGQVGQYGFFFFTIGFLTLPLVAYPTRTHWRSLYKLLSLLPLAYSVLILPLVSESPRWLLIRGRTKEALQVLDRFARLNGKQKLPTNLTLTNPSGSSNVAPCTTSEGGERTPNNKENLWTTKWAAIRMVTVMLAGFGVGFVYYGVQLNVENLNFNLYVSVALNALMEIPAVVIGTFLLGFTNRRLLLSVSSYIAAVSSILCTFFSHRGKTSKVHSNHGGSWAQLIIEAIGFMGASTTFDILYIYCVELFPTNVRNFAVSMLRQAIMLGASVAPLLVVLGRLSPSLSFFVFGAFSISSGVLSLWLPETRNAPLYETLKQQEEEEKHNWVSHNDCALELGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHZ4</accession>
    <name>V7AHZ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">PARP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G162300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHZ4"/>
    <dbReference type="SMR" id="V7AHZ4"/>
    <dbReference type="STRING" id="3885.V7AHZ4"/>
    <dbReference type="Gramene" id="ESW05222">
        <property type="protein sequence ID" value="ESW05222"/>
        <property type="gene ID" value="PHAVU_011G162300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1037">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2134">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PKTGMWN"/>
    <dbReference type="OrthoDB" id="19045at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046404">
        <property type="term" value="F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046403">
        <property type="term" value="F:polynucleotide 3'-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01625">
        <property type="entry name" value="HAD_PNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd22249">
        <property type="entry name" value="UDM1_RNF168_RNF169-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000198">
        <property type="entry name" value="Bifunctional polynucleotide phosphatase/kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1740.10:FF:000006">
        <property type="entry name" value="Poly [ADP-ribose] polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1740.10">
        <property type="entry name" value="Zinc finger, PARP-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006549">
        <property type="entry name" value="HAD-SF_hydro_IIIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013954">
        <property type="entry name" value="PNK3P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006551">
        <property type="entry name" value="Polynucleotide_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001510">
        <property type="entry name" value="Znf_PARP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036957">
        <property type="entry name" value="Znf_PARP_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01664">
        <property type="entry name" value="DNA-3'-Pase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01662">
        <property type="entry name" value="HAD-SF-IIIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12083">
        <property type="entry name" value="BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12083:SF9">
        <property type="entry name" value="BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08645">
        <property type="entry name" value="PNK3P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00645">
        <property type="entry name" value="zf-PARP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01336">
        <property type="entry name" value="zf-PARP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50064">
        <property type="entry name" value="ZF_PARP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PARP-type" evidence="8">
        <location>
            <begin position="48"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="377" mass="42388" checksum="268A3B7D4B2FD773" modified="2014-02-19" version="1">MLRFPNFFFAVNVGRPNLPPLLLTVSAVASPLRNRNPPPLQMAPRDWMMAEYAKSNRSSCRACSKAIEAKTLRLALVSKGSGPFDAVKWHHLNCFPLSSHSPPSPQAIKGFSSLESSDQEALKKLFSENGKSEEKVHKATEDIENELQETEEHDSKRTKLWTPDVKAVVSIKFSVSDVNSKYKDATLLPKWKAFQTVIFLERDDGLRDSSKIAAFDFDGCLAKTDVKRVGANEWTLMHPSIPDKLQSLYNDGYKLVIFTNESNIERWKNKRQVAVDSKVGRLNNFIEKVKVPVQVFIACGVGLKSGAVKTNDDAFRKPKPGMWHLMEQHFNSGIVIDMDQSFYVGDAAGRRSDHSDADIKFAEAIGLKFYLPEEYFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIB3</accession>
    <name>V7AIB3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Erythronate-4-phosphate dehydrogenase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G045400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIB3"/>
    <dbReference type="STRING" id="3885.V7AIB3"/>
    <dbReference type="Gramene" id="ESW03828">
        <property type="protein sequence ID" value="ESW03828"/>
        <property type="gene ID" value="PHAVU_011G045400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW03831">
        <property type="protein sequence ID" value="ESW03831"/>
        <property type="gene ID" value="PHAVU_011G045400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ72">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SYQPSIK"/>
    <dbReference type="OrthoDB" id="2016101at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004617">
        <property type="term" value="F:phosphoglycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42938:SF7">
        <property type="entry name" value="ERYTHRONATE-4-PHOSPHATE DEHYDROGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42938">
        <property type="entry name" value="FORMATE DEHYDROGENASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="273"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="308" mass="33827" checksum="7DAC9F1433ACB4C5" modified="2014-02-19" version="1">MENSSKANGNGSTENGYSIARHSYQPSLKGSLPWLDIKVFYVRVCKCELDDSTPGFLTLNHVPLNPDTLLEVNGVRTSIYSDGMSTLLKRDRVDRKSEEVTFVSTDSVRMSGSVKFDVFDGDVLLLSGVLELCNTNAIVRESSYNGQRWSMNCESYIIPGTSFFKGKQLLLSDSSLPSIEVYIAGSFLGTPIILTKSLQLSQKKHAKKGVLDVIPEHEGSENGKHPSSALTLEAPDYLCDKYEDEDYSSLYSRTTYADGEDGELSWFNAGVRVGVGIGLSVCLGIGIGVGLLVKTYQGTTSHFRRRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJE0</accession>
    <name>V7AJE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">isoleucine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Isoleucyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_011G075600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>tRNA(Ile) + L-isoleucine + ATP = L-isoleucyl-tRNA(Ile) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:9666"/>
            <dbReference type="Rhea" id="RHEA-COMP:9695"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78528"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.5"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJE0"/>
    <dbReference type="STRING" id="3885.V7AJE0"/>
    <dbReference type="Gramene" id="ESW04206">
        <property type="protein sequence ID" value="ESW04206"/>
        <property type="gene ID" value="PHAVU_011G075600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0434">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EICETEA"/>
    <dbReference type="OrthoDB" id="1706657at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA deacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006428">
        <property type="term" value="P:isoleucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048608">
        <property type="term" value="P:reproductive structure development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000023">
        <property type="entry name" value="Isoleucyl-tRNA synthetase,cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="entry name" value="Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002301">
        <property type="entry name" value="Ile-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023586">
        <property type="entry name" value="Ile-tRNA-ligase_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780:SF1">
        <property type="entry name" value="ISOLEUCINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780">
        <property type="entry name" value="SOLEUCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00984">
        <property type="entry name" value="TRNASYNTHILE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="ValRS/IleRS/LeuRS editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="12">
        <location>
            <begin position="18"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="272"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW04206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="400" mass="45484" checksum="D394B78C2A7585B8" modified="2014-02-19" version="1">MDDVCEGKDFTFSKQEEKILELWSQIDAFNTQLALTKDKPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDVLKLGIDKYNEECRSIVTRYVSEWESVITRTGRWIDFKNDYKTMDLKFMESVWWVFSQLYAKNLVYKGFKVMPYSTGCKTPLSNFEAGQNYKDVSDPEVFMTFPVVGDQHGASFVAWTTTPWTLPSNLALCINANFTYVKVRNKYSGKVYIVAQSRLSAINNPKEKPKEAVVNSSNDVSKNKNAKTKGASGGKTENVLDSFEVLEKFSGASLVGTKYEPLFDYFKELSDTAFRVVADNYVTDDSGTGVVHCAPAFGEDDFRVCIDNKILSKVCSFKNMKLYEDCFLFSLIKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJY9</accession>
    <name>V7AJY9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G093800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJY9"/>
    <dbReference type="STRING" id="3885.V7AJY9"/>
    <dbReference type="Gramene" id="ESW04426">
        <property type="protein sequence ID" value="ESW04426"/>
        <property type="gene ID" value="PHAVU_011G093800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUB6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACPMIES"/>
    <dbReference type="OrthoDB" id="1891924at2759"/>
    <dbReference type="PhylomeDB" id="V7AJY9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="CDD" id="cd09917">
        <property type="entry name" value="F-box_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31639">
        <property type="entry name" value="F-BOX PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31639:SF139">
        <property type="entry name" value="F-BOX_LRR PLANT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="4"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="419" mass="47844" checksum="DF6DFEDEF2817568" modified="2014-02-19" version="1">MDQLPVEVIGNILSHLRAARDVVIASATCRKWRLACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTILQTSGLQALSILMEDVDEFLASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSHVSISALDLNLLVYACPKIEALELVNPEIAMSESQVTVELSSSTLKSVYVEAISLDKFILEADGLETLHLKDCALEFFELIGKGNLKHFKIDDVSVIHLDIGETVEDLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEEEVVDLETIATCFPYLSHLSLSYDVRDGVLHYGLQGSSYLENVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVSEAKSHEECQMLASFTTSMVEMMRRYIHVDPHFKYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKQ0</accession>
    <name>V7AKQ0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G1162001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKQ0"/>
    <dbReference type="Gramene" id="ESW04681">
        <property type="protein sequence ID" value="ESW04681"/>
        <property type="gene ID" value="PHAVU_011G1162001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="12558" checksum="BF40B70BBE823260" modified="2014-02-19" version="1" fragment="single">VSQETRRKLSSRRTKDESVCKDDKHIVFSTTSSSPPHRPLCKVFVRSSTQPLCSRTFVVVVGASTFRVVWRWCRLRHPPLTVVGWRCRLGHLVFTVVGWRSPLGHLVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALM3</accession>
    <name>V7ALM3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mitochondrial 28S ribosomal protein S34</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G206600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALM3"/>
    <dbReference type="STRING" id="3885.V7ALM3"/>
    <dbReference type="Gramene" id="ESW05753">
        <property type="protein sequence ID" value="ESW05753"/>
        <property type="gene ID" value="PHAVU_011G206600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1C1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="16434at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032053">
        <property type="entry name" value="Ribosomal_mS34"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35316">
        <property type="entry name" value="28S RIBOSOMAL S34 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35316:SF1">
        <property type="entry name" value="28S RIBOSOMAL S34 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16053">
        <property type="entry name" value="MRP-S34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="47"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="162"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="19137" checksum="9FB2E0EC41DB9430" modified="2014-02-19" version="1">MRNLFYVGQLGDFKRKTMASAIGSRVESVRNSLLLRSSLNFMRPFCSSSSSTSSAVSSAQKPKKSKRKKKNLFEVAQFLPNWGIGYHMAKCHWNEVSYEITKLNLYKDGRHGKAWGLAYKNGLPIADAPKKISGVHKRCWKYLPNVVKASESSTNSTSPTDIDLKVETEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALR0</accession>
    <name>V7ALR0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G055900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALR0"/>
    <dbReference type="STRING" id="3885.V7ALR0"/>
    <dbReference type="Gramene" id="ESW06536">
        <property type="protein sequence ID" value="ESW06536"/>
        <property type="gene ID" value="PHAVU_010G055900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06537">
        <property type="protein sequence ID" value="ESW06537"/>
        <property type="gene ID" value="PHAVU_010G055900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06538">
        <property type="protein sequence ID" value="ESW06538"/>
        <property type="gene ID" value="PHAVU_010G055900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXUK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSFWISE"/>
    <dbReference type="OrthoDB" id="20282at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd22860">
        <property type="entry name" value="PDRG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030482">
        <property type="entry name" value="PDRG1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21162">
        <property type="entry name" value="P53 AND DNA DAMAGE-REGULATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21162:SF0">
        <property type="entry name" value="P53 AND DNA DAMAGE-REGULATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="166" mass="18743" checksum="D21EE05F893AC3ED" modified="2014-02-19" version="1">MDENMKQFQKELTELEVEAEHLLLARHQLVENDRLRNGNREALTALRKRARTTVSSVPSPFESMMRGVAGTSSRPLVQEVCNTCGNHNSSEPTWMMFPGTDLFARIPFHAAHTILEKDQTQLDFESKKLQSIMKEKAYFLSESGVLADKISPGVLKSLVTLNDKPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM14</accession>
    <name>V7AM14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dirigent protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G063900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Secreted</location>
            <location evidence="4">Extracellular space</location>
            <location evidence="4">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the plant dirigent protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM14"/>
    <dbReference type="SMR" id="V7AM14"/>
    <dbReference type="STRING" id="3885.V7AM14"/>
    <dbReference type="Gramene" id="ESW06632">
        <property type="protein sequence ID" value="ESW06632"/>
        <property type="gene ID" value="PHAVU_010G063900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXST">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QASTHTF"/>
    <dbReference type="OrthoDB" id="1864232at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009699">
        <property type="term" value="P:phenylpropanoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.480.10">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044859">
        <property type="entry name" value="Allene_oxi_cyc_Dirigent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004265">
        <property type="entry name" value="Dirigent"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21495">
        <property type="entry name" value="NUCLEOPORIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03018">
        <property type="entry name" value="Dirigent"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0964">Secreted</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008194047" description="Dirigent protein" evidence="4">
        <location>
            <begin position="22"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="20628" checksum="475F69F6ED2ACCE2" modified="2014-02-19" version="1">MATQLLLTLFLLSFTLTTIKAEDTGFVGTVDPKSLGLNKKQTLSHFRFYWHDIISGSNATAVQIIEPLPKYNTTTSFGSVTVTDNALTLGPELSSKVVGRSEGIYALTSQSQVTLLMVMNFALSEGKYNGSAITIVGRNVAYEEAKELPVIGGSGVFKFATGYAKAKTYYFDPKTGDATTEYNIYVFHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7APA3</accession>
    <name>V7APA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein TIFY</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Jasmonate ZIM domain-containing protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G127400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Repressor of jasmonate responses.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="2">The jas domain is required for interaction with COI1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TIFY/JAZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APA3"/>
    <dbReference type="STRING" id="3885.V7APA3"/>
    <dbReference type="Gramene" id="ESW07409">
        <property type="protein sequence ID" value="ESW07409"/>
        <property type="gene ID" value="PHAVU_010G127400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S6PU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNSCKSP"/>
    <dbReference type="OrthoDB" id="1937734at2759"/>
    <dbReference type="PhylomeDB" id="V7APA3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031347">
        <property type="term" value="P:regulation of defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000022">
        <property type="term" value="P:regulation of jasmonic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009611">
        <property type="term" value="P:response to wounding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018467">
        <property type="entry name" value="CCT_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040390">
        <property type="entry name" value="TIFY/JAZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010399">
        <property type="entry name" value="Tify_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33077:SF52">
        <property type="entry name" value="PROTEIN TIFY 11D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33077">
        <property type="entry name" value="PROTEIN TIFY 4A-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09425">
        <property type="entry name" value="Jas_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06200">
        <property type="entry name" value="tify"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00979">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51320">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1184">Jasmonic acid signaling pathway</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tify" evidence="4">
        <location>
            <begin position="99"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="136"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="200"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="207"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="234" mass="25207" checksum="1EB1B59FAA7342F5" modified="2014-02-19" version="1">MSSFSNTVSEARRSGKAPEKSSFSQTCSLLSQFLKEKRASGDSTLGMVGKMEPKASTKDLFGSLQNSDGALKLSASAMDFLPQLVENPCIKKSNLSSSSVPESPQMTIFYAGKMLVFDAFPPEKATEVMELATKLASDTSGAEETPPSGPVTTKELAEAKVPQTNTSETPKLGSQGVGSDMRYPRRASLLKFLEKRKERVIARGPYQMNNQKAEGSSSGGEPEDQCSKQFDLNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7APS1</accession>
    <name>V7APS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Pyruvate dehydrogenase E1 component subunit alpha</fullName>
            <ecNumber evidence="8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G119600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>N(6)-[(R)-lipoyl]-L-lysyl-[protein] + pyruvate + H(+) = N(6)-[(R)-S(8)-acetyldihydrolipoyl]-L-lysyl-[protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Tetramer of 2 alpha and 2 beta subunits.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="8"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APS1"/>
    <dbReference type="SMR" id="V7APS1"/>
    <dbReference type="STRING" id="3885.V7APS1"/>
    <dbReference type="Gramene" id="ESW07315">
        <property type="protein sequence ID" value="ESW07315"/>
        <property type="gene ID" value="PHAVU_010G119600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0225">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ETYRWRE"/>
    <dbReference type="OrthoDB" id="10256198at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:pyruvate decarboxylation to acetyl-CoA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02000">
        <property type="entry name" value="TPP_E1_PDC_ADC_BCADC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.970:FF:000013">
        <property type="entry name" value="Pyruvate dehydrogenase E1 component subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050642">
        <property type="entry name" value="PDH_E1_Alpha_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017597">
        <property type="entry name" value="Pyrv_DH_E1_asu_subgrp-y"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03182">
        <property type="entry name" value="PDH_E1_alph_y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516:SF60">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Dehydrogenase E1 component" evidence="11">
        <location>
            <begin position="90"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="359"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="47293" checksum="1BAE7F30F4F28954" modified="2014-02-19" version="1">MSFTATKFAPSPLPLSSTTPRSNDKPLSFSFDHSKANPSSSSFLGSTRKLLRFRAPAKPRSSSPVAAVLLQQTSNLLITKEEGLELYEDMILGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDYVVSTYRDHVHALSKGVSSRAVMSELFGKATGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLNQADADQVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECETYRFRGHSLADPDELRDPAEKEYYAARDPITALKQYLAENNLASEQELKAIEKKIDEILDDAVEFADNSPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQI1</accession>
    <name>V7AQI1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G083200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQI1"/>
    <dbReference type="SMR" id="V7AQI1"/>
    <dbReference type="STRING" id="3885.V7AQI1"/>
    <dbReference type="Gramene" id="ESW06868">
        <property type="protein sequence ID" value="ESW06868"/>
        <property type="gene ID" value="PHAVU_010G083200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TPEVEPC"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16469">
        <property type="entry name" value="RING-H2_RNF24-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045191">
        <property type="entry name" value="MBR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF165"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22937:SF222">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="114"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="18583" checksum="3FF6B8B8C50FCDC2" modified="2014-02-19" version="1">MHRGHSNFHARRGNMHNHPARGHSNFHAPRGNMHNLPPRAFRQEVASFRDHHSDIQLDIDDMSYEELLILGERIGSVERGLSEEIIASQMLTKTYLLPNNLEGSTSEELEIDLCIICQDEYKNEEEIGILQCGHEYHADCVRRWLQEKNVCPLCKSKALAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQI6</accession>
    <name>V7AQI6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PWWP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G142200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQI6"/>
    <dbReference type="STRING" id="3885.V7AQI6"/>
    <dbReference type="Gramene" id="ESW07585">
        <property type="protein sequence ID" value="ESW07585"/>
        <property type="gene ID" value="PHAVU_010G142200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUJY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TMEESHT"/>
    <dbReference type="OrthoDB" id="607790at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd05162">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044679">
        <property type="entry name" value="PWWP2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000313">
        <property type="entry name" value="PWWP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33697">
        <property type="entry name" value="T17B22.17 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33697:SF1">
        <property type="entry name" value="TUDOR_PWWP_MBT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00855">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63748">
        <property type="entry name" value="Tudor/PWWP/MBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50812">
        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PWWP" evidence="2">
        <location>
            <begin position="16"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="133"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="328"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="460"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="344"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="485"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="780" mass="83989" checksum="2A6D06BB25628636" modified="2014-02-19" version="1">MGSSGKSNVNGIDASVGGLVWVRRRNGSWWPGRILGLHELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDAILHALELESAHLDKESLSLCSGLDKPGSEHGGSAGELPLMSNSEDVTGDLSDSDDNSNSAPELSQSVISFEVPNHNGSLKLHSVQGRRRRTPNDSEDDGSEGVKRMRGLEDLGIGVVSKKKVQGTGATEIGLHISASLNNSTTGNCLANGTSVNGGKGYSSTLKRKRSQVANVHELLKRKNRRRPLTKVLKSTAMVSVPVICDHLPISNSSPLCGVTDGRSSGLDSNDSKKTFPMSTRNSDSTEAGCCENGTSLIVHDHGSGDDGSQINHGVKENEASGQAGLVGKDSPDKLFDVPFVGVLGEVKHTPDLSPILVSCSPDKPQVSALGQQSCNLSPCEAVSLRDEIKNEPGCTSSATGHNIVGHRQDKGSSKWQSKGKRNSRHTSKNIKHVSRKYVDTGHQSSASLPVIGSSDGTYQGAGSKVDWNGMGAPYTSYNCNSQVKCKPVAEGQLEGFRDLNKHIKGTTTEAKALPDGSLIPQRLLPYRHSRFTVNSRYQMADFPGRNYCSEASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLEEGHCDKMLSGSGCDMEAGDVFCMAKPNLVPRRIHSKSSKRLKSSKMKKTGLMNKKIRKLSSLTGHRQSEEERKPVVDKLKGPVIACIPLKVVFSRINEAVSGQARSTHRAVPTSSTNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARI9</accession>
    <name>V7ARI9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">VQ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G032600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARI9"/>
    <dbReference type="STRING" id="3885.V7ARI9"/>
    <dbReference type="Gramene" id="ESW08267">
        <property type="protein sequence ID" value="ESW08267"/>
        <property type="gene ID" value="PHAVU_009G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV2B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MDKSCHP"/>
    <dbReference type="OrthoDB" id="1934230at2759"/>
    <dbReference type="PhylomeDB" id="V7ARI9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008889">
        <property type="entry name" value="VQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039612">
        <property type="entry name" value="VQ_5/9/14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33783">
        <property type="entry name" value="PROTEIN HAIKU1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33783:SF4">
        <property type="entry name" value="VQ MOTIF-CONTAINING PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05678">
        <property type="entry name" value="VQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VQ" evidence="2">
        <location>
            <begin position="87"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="222"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="11"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="38"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="117"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="229"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="310" mass="34242" checksum="F6E18F82D6239C42" modified="2014-02-19" version="1">MDKSCHPSADSTNTSINTTSGSNSNSNSRDQYLRHLNKLSQKISKPIIKKPTFDHPQPQPQSQAQPQNPNQNQNQNPQAQPQQNLQHQPPVYNINKNEFRDVVQRLTGSPAHDRISTPPPIQQPKPPSSRLQRIRPPPLPQITNRPPPLLNPTTLPRPQLPNVSSNAVSFNNFPVFARHPAPLSPLPPFPTVHAAAESPISAYMRDLQNLVGSNPKHFSGFSPLPPQFHPQQEQQQQQQQQSQHQAMVPLQASFQMPSSPVPFGCLNSQLASYPLLSPGLLFSPTSGQLAFPPLPLSPTVPVPSPRWKGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AST5</accession>
    <name>V7AST5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">beta-aspartyl-peptidase</fullName>
            <ecNumber evidence="3">3.4.19.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G067800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Cleavage of a beta-linked Asp residue from the N-terminus of a polypeptide.</text>
            <dbReference type="EC" id="3.4.19.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.5" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AST5"/>
    <dbReference type="SMR" id="V7AST5"/>
    <dbReference type="STRING" id="3885.V7AST5"/>
    <dbReference type="Gramene" id="ESW08707">
        <property type="protein sequence ID" value="ESW08707"/>
        <property type="gene ID" value="PHAVU_009G067800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1592">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CERTEWE"/>
    <dbReference type="OrthoDB" id="2262349at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004067">
        <property type="term" value="F:asparaginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008798">
        <property type="term" value="F:beta-aspartyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04701">
        <property type="entry name" value="Asparaginase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.30:FF:000001">
        <property type="entry name" value="Isoaspartyl peptidase/L-asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.30">
        <property type="entry name" value="(Glycosyl)asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000246">
        <property type="entry name" value="Peptidase_T2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10188:SF13">
        <property type="entry name" value="ISOASPARTYL PEPTIDASE_L-ASPARAGINASE 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10188">
        <property type="entry name" value="L-ASPARAGINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01112">
        <property type="entry name" value="Asparaginase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="224"/>
            <end position="227"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="246"/>
            <end position="249"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="9">
        <location>
            <begin position="195"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR600246-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR600246-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR600246-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="34372" checksum="886781E78D7BC5E4" modified="2014-02-19" version="1">MGGWAIAVHGGAGVDPNLPPQRQEQAKQLLTRCLNLGISSLRSNASALDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGSNRRCGAVSGLTTVKNPVSLARLVMEKSPHSYLAFNGAEEFARQQGVDVVENEYFVTPENVGMLKLAKEANTILFDYRIPTVGYDSCGAGAESPLQMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKMSGRIGDSPLIGAGTYACGVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLQLQEAVDFVINHRLDEGKAGLIAVSNTGEVAYGFNCNAMFRGCATEDGFMEVGIWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AV14</accession>
    <name>V7AV14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G045900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AV14"/>
    <dbReference type="SMR" id="V7AV14"/>
    <dbReference type="STRING" id="3885.V7AV14"/>
    <dbReference type="Gramene" id="ESW08438">
        <property type="protein sequence ID" value="ESW08438"/>
        <property type="gene ID" value="PHAVU_009G045900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQP9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEYYVTE"/>
    <dbReference type="OrthoDB" id="743588at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010197">
        <property type="term" value="P:polar nucleus fusion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048868">
        <property type="term" value="P:pollen tube development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31741">
        <property type="entry name" value="OS02G0726500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31741:SF6">
        <property type="entry name" value="PROTEIN EMBRYO SAC DEVELOPMENT ARREST 30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="11" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="388"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="615"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="403"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="14">
        <location>
            <begin position="624"/>
            <end position="639"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="14">
        <location>
            <begin position="654"/>
            <end position="663"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW08438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="663" mass="75200" checksum="A4547184174B8501" modified="2014-02-19" version="1">MAFVTKIKWVVLSVVTLSVASIIIHLSLAKLWSVNLVQYKALPILPEDFGFVLGRQVIKNKKLWGSIKSLETLQPNANARSNYSVPKEHSNGFIYAKVFGGFAKIRSSISDLVAISRLLNATLVIPEIQESTHSKGISAKFKSFSYIYNEEQFIAYLKNDVVIAKSLPESLLERRKRNEIPTFKPTSSSSLNFYTKEILPKLKKSKVIGLVIANGGALQSILPTSMAEIQRLRCRVAFHALQFRPEIQMLGRRMVHKLRALGQPFLAFHPGLLRETLAYNGCAELFQDVHTELIQHQRSQMIKEGILKEELNVNSHSRREKGLCPLMPEEVGILLRVMGYPSKTVIYLAGSETFGGQRVLIPLRSMFMNTLDRTSLCSEKELSDLVGPETPLPLNRFQPPPVKSEKELNEAWKKAGPQPRPLPPPPDRPIYQHEKEGWYAWITETPTEPDPSPMDLRMKAHRLLWDALDYIVSLEADAFFPGFNNDGSRWSDFSSLVMGHRLYETASFRTYRPDRKVVAKLFNMTRENLYHPKHNWTILVQEHLNKSLTEEGLIRQFLLSKPAIFLSHPLPECSCRIDSTKATNPVRGEDGQVLYGGEDVCPKWMQHANEAVSLEKEGVKSDDEGLADYESNDFVDESESDKNGSKSNQTPLWDQDEEMDPND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AY65</accession>
    <name>V7AY65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G222800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AY65"/>
    <dbReference type="STRING" id="3885.V7AY65"/>
    <dbReference type="Gramene" id="ESW10597">
        <property type="protein sequence ID" value="ESW10597"/>
        <property type="gene ID" value="PHAVU_009G222800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4VR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIICCNL"/>
    <dbReference type="OrthoDB" id="1500710at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055290">
        <property type="entry name" value="At3g26010-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056592">
        <property type="entry name" value="Beta-prop_At3g26010-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011043">
        <property type="entry name" value="Gal_Oxase/kelch_b-propeller"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35546:SF130">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35546">
        <property type="entry name" value="F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24750">
        <property type="entry name" value="b-prop_At3g26010-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50965">
        <property type="entry name" value="Galactose oxidase, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="13"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="435" mass="48885" checksum="A809CA4022721C2F" modified="2014-02-19" version="1">MAATKSNTTINNLLDDSLTDIFCKLPCKSLFSCKSVSKHWLTLISHPNFHSLYLTHQHTLFKKIQSQGEDPDQPSFILKPYNALVIAPNIPSLQLGPLENQLSLTSLDPELKPANIVPQLRSVSKFVFASSNGLLVYGNPLPRYKCIYHIRNPLTKDSLKLPSALTLCDHAGVLVGFMCDPYYNLQKTNPNVSIVSPSQRRFRVVRIPAFSDTRFAFDVEVFSSETGKWKRFPLSCPQGFACGFFLSSSSVEHEGKLYFMGGGRVLVYDPYDDERVASVIELPRGFGEAYRGCLGVSCGRLQLSEFPISPSSNFEAYSGRVWELQCCGKGEERRWELMHEFCLPEIIGPFFQQLKGLEVENVKGCSRILAFHPYVKDSVFLKFGDNIICCNLLTCRFRVCKYGGLSLLFYPVIPIVLPWWPTPIPSPPSLLDPSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYF2</accession>
    <name>V7AYF2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tubulin--tyrosine ligase-like protein 12 SET-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G227300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYF2"/>
    <dbReference type="SMR" id="V7AYF2"/>
    <dbReference type="STRING" id="3885.V7AYF2"/>
    <dbReference type="Gramene" id="ESW10652">
        <property type="protein sequence ID" value="ESW10652"/>
        <property type="gene ID" value="PHAVU_009G227300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2155">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKGDECT"/>
    <dbReference type="OrthoDB" id="202825at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.20">
        <property type="entry name" value="ATP-grasp fold, B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057954">
        <property type="entry name" value="SET_TTL12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004344">
        <property type="entry name" value="TTL/TTLL_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027749">
        <property type="entry name" value="TTLL12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46088">
        <property type="entry name" value="TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46088:SF1">
        <property type="entry name" value="TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25556">
        <property type="entry name" value="SET_TTL"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03133">
        <property type="entry name" value="TTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51221">
        <property type="entry name" value="TTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tubulin--tyrosine ligase-like protein 12 SET-like" evidence="1">
        <location>
            <begin position="77"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin--tyrosine ligase-like protein 12 SET-like" evidence="1">
        <location>
            <begin position="383"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="866" mass="98312" checksum="4B50F77030472424" modified="2014-02-19" version="1">MVAMASTANRRIETYEEFAKVHALLLAASGLPECLHRRLFDKLSGESFDGGSHFQIQPCEGGRQRRLVLTSTSMETDSDVFLVDHAWTFRLSDAYKQLREVPGLAERMGSLMCVDVDVDDDEDEGNCKLGVEETLESEVGEAKEKGDGTLRWLELEGLNIDDAMLVSLALPTRFPDLVALSLLGNKLNSAEVVVQEVIKFKHLKGIWLNSNPLLKNCDGKLEGVILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPVNADQAHTSLHTVSSLDLSNRNIHNLKNKAFTPICLPSLTYLNIQGNPLDQNSVSDLLDLLRRFTCLRSLEVDIPGPLGRRAIDILESLPNISELNGINASKILETGKHVIGSMLLPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVQKGDECTRNFLLGIGEDKQRSARLTAWFHTPENYFINAYEKHHQKLLSTSLISPTFQYSETGSIHQHCGRPLRVYTDIPHVEEYLTHPEFAITNEPKGADIIWTGMQVDEEMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRRKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNLYSLARSSLFEYETHFTVMNYRGAINHKNASEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGVDFFNNVFRCLFLNETSQVSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYR4</accession>
    <name>V7AYR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase-like plant mobile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G210500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYR4"/>
    <dbReference type="STRING" id="3885.V7AYR4"/>
    <dbReference type="Gramene" id="ESW10450">
        <property type="protein sequence ID" value="ESW10450"/>
        <property type="gene ID" value="PHAVU_009G210500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW7G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WLPYMED"/>
    <dbReference type="OrthoDB" id="1939467at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010073">
        <property type="term" value="P:meristem maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019557">
        <property type="entry name" value="AminoTfrase-like_pln_mobile"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044824">
        <property type="entry name" value="MAIN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033">
        <property type="entry name" value="PROTEIN MAIN-LIKE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033:SF8">
        <property type="entry name" value="PROTEIN MAINTENANCE OF MERISTEMS-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10536">
        <property type="entry name" value="PMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotransferase-like plant mobile" evidence="1">
        <location>
            <begin position="51"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="409" mass="47090" checksum="532B620DDEE8D5A0" modified="2014-02-19" version="1" fragment="single">MSLLRLQDKHVTKDVWEGNERLLRPRRHAIWILKHEDILDQRVKQLIDHSGFGHLLKFKNIDFNHVLLTTLVERWRSETHTFHFPLGETTVTLEDVELILGLPVDGQAVTRITNGDLVSLCEQFLRFTPPATAVKGNVISLSWLNNNFQELPHHATDDVIAQHAQAHILTLIGSLLMPDSSGSKVHLMYLLLLADLNNARNYSWGSAVLASLYRALDHEIDFNQDNIGGCTLLLQCWAWERLTCISPQLQPLTDEEVQQGVGFPLGKRTHTGGTIVPQIRAMFDGIKAKEVFLWTPYRVDYVRRLITIEVSPIARAVVPLICFATVEFHQVDRVMRQFGFRQSIPHDPFNLDQLHKEDMRGRTDRYWPQYHGNQFNGNGHLHDKSTYMQWYINHTIRYISPIESSSDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ41</accession>
    <name>V7AZ41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Flavin-containing monooxygenase</fullName>
            <ecNumber evidence="10">1.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G133300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>indole-3-pyruvate + NADPH + O2 + H(+) = (indol-3-yl)acetate + CO2 + NADP(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34331"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17640"/>
            <dbReference type="ChEBI" id="CHEBI:30854"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.14.13.168"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Plant hormone metabolism; auxin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FMO family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ41"/>
    <dbReference type="SMR" id="V7AZ41"/>
    <dbReference type="STRING" id="3885.V7AZ41"/>
    <dbReference type="Gramene" id="ESW09506">
        <property type="protein sequence ID" value="ESW09506"/>
        <property type="gene ID" value="PHAVU_009G133300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1399">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHFNICP"/>
    <dbReference type="OrthoDB" id="66881at2759"/>
    <dbReference type="PhylomeDB" id="V7AZ41"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103075">
        <property type="term" value="F:indole-3-pyruvate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004499">
        <property type="term" value="F:N,N-dimethylaniline monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009851">
        <property type="term" value="P:auxin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050982">
        <property type="entry name" value="Auxin_biosynth/cation_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020946">
        <property type="entry name" value="Flavin_mOase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539">
        <property type="entry name" value="FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539:SF9">
        <property type="entry name" value="INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00743">
        <property type="entry name" value="FMO-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00469">
        <property type="entry name" value="PNDRDTASEII"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0073">Auxin biosynthesis</keyword>
    <keyword evidence="5 10" id="KW-0274">FAD</keyword>
    <keyword evidence="4 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW09506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="399" mass="44916" checksum="16335A5130DD2064" modified="2014-02-19" version="1">MEIEVPVVIVGAGPAGLATSACLNKLSIPNLVLERDDCHASLWRKRTYDRLKLHLGKDFCSLPHMPFPSDFPTFVPRIHFLRYLDNYVSRFKISIRYNRSVESAYLDDINGKWRIVVKDTASKEDAVEVYVAEFLVVACGENNEGYVPRVEGLEGFEGEYLHCSKYFNGRDMYGKNVLVVGCGNSGMEIAYDLSNWGANTSIVIRGPVHFFTKEMVFLGMTLLKYLKMENVDKLMMLMSKMKYGDMSKYGLVRPKDGPFLLKKKGGTTPTIDVGCVPLIKRGEIKVFSTISRINEGKMVEFEDGKDGEFDIIIFATGYNSTVLNWLKDYEGLFNGNGMPKPGFPNHWKGENGLYCAGFSRRGLDGIAFDARRIADDIRMTTSARDLPETNFAGLKLLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZC5</accession>
    <name>V7AZC5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">L-gulonolactone oxidase</fullName>
            <ecNumber evidence="4">1.1.3.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_009G257600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-gulono-1,4-lactone + O2 = L-ascorbate + H2O2 + H(+)</text>
            <dbReference type="Rhea" id="RHEA:32363"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:17587"/>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
            <dbReference type="EC" id="1.1.3.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; L-ascorbate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.3.8" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZC5"/>
    <dbReference type="STRING" id="3885.V7AZC5"/>
    <dbReference type="Gramene" id="ESW11007">
        <property type="protein sequence ID" value="ESW11007"/>
        <property type="gene ID" value="PHAVU_009G257600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4730">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NNYIAFR"/>
    <dbReference type="OrthoDB" id="610608at2759"/>
    <dbReference type="UniPathway" id="UPA00132"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003885">
        <property type="term" value="F:D-arabinono-1,4-lactone oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050105">
        <property type="term" value="F:L-gulonolactone oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019853">
        <property type="term" value="P:L-ascorbic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.465.10:FF:000033">
        <property type="entry name" value="L-gulonolactone oxidase 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007173">
        <property type="entry name" value="ALO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050432">
        <property type="entry name" value="FAD-linked_Oxidoreductases_BP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010031">
        <property type="entry name" value="FAD_lactone_oxidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055154">
        <property type="entry name" value="GULLO2-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010030">
        <property type="entry name" value="GULO_Plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01677">
        <property type="entry name" value="pln_FAD_oxido"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878">
        <property type="entry name" value="GULONOLACTONE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878:SF67">
        <property type="entry name" value="L-GULONOLACTONE OXIDASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04030">
        <property type="entry name" value="ALO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22906">
        <property type="entry name" value="GULLO2-like_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000136">
        <property type="entry name" value="LGO_GLO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0060">Ascorbate biosynthesis</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754271" description="L-gulonolactone oxidase" evidence="11">
        <location>
            <begin position="17"/>
            <end position="573"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="12">
        <location>
            <begin position="44"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW11007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="573" mass="63937" checksum="BF171110870697B3" modified="2014-02-19" version="1">MFFLLLFFLGFHVAVSTPEDPIKCSSQNTNCTITNSYATFPDRSICEAEEVFYPTQEEDVLRVVAAATRNGKKMKVATRFSHSVPKWVCPEGNNGWLISTKDLNRVLEIDAEKRTVRVQSGVTLKQLVEEAATAGLGLQYTPYWLGLTVGGILGTGAHGSSLWGKGSAVHEQVVEFRIVTPASPQHGYAQVHTLSHEQDQHFNAAKLSLGLLGVISEITLKLEPLFKRSITYLTENDANLEGQIITFGQQHEFADIIWYPHQHKAVYRVDDRVPINTSGNGVYDFIPFRSTPAIELELLRTTEELEELTGNAVGKCFLAKRTTNALMATAYGLTNNGLIFTGFPVVGFHNQIQASGSCLGSDMNTKTRLCPWDSRIKGEFFHQTAFSIGLSVVKNFIEDVKKLVELEAKAFCGIEIYNGILMRYVKASSAYLGKQEDSIDFDITYYRSKDPMAPRLHEDIIEEVEQIGIFKYGGLPHWGKNRNVAFEGVMNKYKNADKFLKVKDEYDPQRLFSSEWTDQVFGLKEGLMISKDGCALEGLCLCSHHNHCAPTKGYFCRPGKVYKEAKICALSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B053</accession>
    <name>V7B053_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Clp R domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G192500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B053"/>
    <dbReference type="STRING" id="3885.V7B053"/>
    <dbReference type="Gramene" id="ESW10243">
        <property type="protein sequence ID" value="ESW10243"/>
        <property type="gene ID" value="PHAVU_009G192500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1051">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="47330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd19499">
        <property type="entry name" value="RecA-like_ClpB_Hsp104-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000120">
        <property type="entry name" value="ATP-dependent chaperone ClpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000025">
        <property type="entry name" value="ATP-dependent Clp protease subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000010">
        <property type="entry name" value="Chaperone clpB 1, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="entry name" value="Clp, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050130">
        <property type="entry name" value="ClpA_ClpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638">
        <property type="entry name" value="ATP-DEPENDENT CLP PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638:SF18">
        <property type="entry name" value="HEAT SHOCK PROTEIN 104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="Double Clp-N motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Clp R" evidence="9">
        <location>
            <begin position="3"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="396"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW10243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="903" mass="100685" checksum="51E27A6FAD9B7746" modified="2014-02-19" version="1">MNPEKFTHKTNEALVSAHETAVSNGHAQFTPLHLASSLLSDRVGIFFQVLSNVGGEESARAAESVFSQTLKKLPSQTPPPDEVPASTNLMKAMRRAQTLQKTRGDTHLAVDQLILGLLGDSQIAELLKEAGVEASNVKSEVEKLRRKDRKKVVSATGDTTFKALLTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLVQRIVKGDVPSNLADVRLFALDMGALVAGATYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKVGGCMDAANLFKPMLARGQLRCIGATTLDEYRKYVEKDAAFERRFQQVYVAEPSVVDTVSILRGLKEKYEGHHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANEIDNLERKRMQLEVELHALEKEKDKVSKARLVEVRKELDDLRDKLQPLMMKYRKEKNRIDEIRRLKQKREELNFGLLEAERRYDLARAADLRYGAIQEVESAIQELEGNTEGNVMLTETVGPEHIAEVVSRWTGIPVTRLGQNDKERLIGLGDRLHNRVVGQDQAVNCVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDNENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYNVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLTGLSGKSSMQVARDKVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVASRLAERGIAMAVTEAALDYILSESYDPVYGARPIRRWLERKVVTELSRMLVKEEIDENSTVYIDAGPEGSELIYRVENNGGMVNAVTGQKSDILIQIPNGSLPRSDAAQAVKKLKIEQMDEDEDGEMEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0A3</accession>
    <name>V7B0A3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ethanolamine kinase</fullName>
            <ecNumber evidence="3">2.7.1.82</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G197300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from ethanolamine: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the choline/ethanolamine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.82" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0A3"/>
    <dbReference type="SMR" id="V7B0A3"/>
    <dbReference type="STRING" id="3885.V7B0A3"/>
    <dbReference type="Gramene" id="ESW10298">
        <property type="protein sequence ID" value="ESW10298"/>
        <property type="gene ID" value="PHAVU_009G197300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4720">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EAPYYKI"/>
    <dbReference type="OrthoDB" id="10267235at2759"/>
    <dbReference type="PhylomeDB" id="V7B0A3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004305">
        <property type="term" value="F:ethanolamine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006646">
        <property type="term" value="P:phosphatidylethanolamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05157">
        <property type="entry name" value="ETNK_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603">
        <property type="entry name" value="CHOLINE/ETHANOALAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603:SF66">
        <property type="entry name" value="ETHANOLAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01633">
        <property type="entry name" value="Choline_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00037883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="377" mass="43939" checksum="2B3EF504F13CC5FC" modified="2014-02-19" version="1">MGAEVKIWNPVEVAEQASHDYVSQIHPSQLTIDPSLELTQMTPLVINMCRDMFKAWANLADSCFAVEKISGGITNLLLKVSVKQENCIEEIITIRLYGPNTEFIIDRQRELQATKFITAAGFGAKWLGIFGNGMVQSFINAQTLSPSDMREPKLVAKIAKQLQRFHYVEIPGSKEPQLWNDVWKFFEKASGLEYDDSEKQKTYETISFKELHDEIVELKELCDLLKSPVIFAHNDLLSGNIMINCEEDKLYFIDYEYASYNYRGYDIGNHFAEYAGFDCDFHLYPNINEQYHFLRHYLQPERPYEVSEKDLEALYVEANTFSLASHIFWALWGLIQAKMSPIEFDYLGYFFLRYKEYKRQKEKYFLLAQTYLSGCKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0D0</accession>
    <name>V7B0D0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RecQ mediated genome instability protein 1 OB-fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G200000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0D0"/>
    <dbReference type="SMR" id="V7B0D0"/>
    <dbReference type="STRING" id="3885.V7B0D0"/>
    <dbReference type="Gramene" id="ESW10327">
        <property type="protein sequence ID" value="ESW10327"/>
        <property type="gene ID" value="PHAVU_009G200000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10328">
        <property type="protein sequence ID" value="ESW10328"/>
        <property type="gene ID" value="PHAVU_009G200000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3683">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRMSMFS"/>
    <dbReference type="OrthoDB" id="434939at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.770">
        <property type="entry name" value="RecQ-mediated genome instability protein Rmi1, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042470">
        <property type="entry name" value="RMI1_N_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013894">
        <property type="entry name" value="RMI1_OB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13681">
        <property type="entry name" value="SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13681:SF24">
        <property type="entry name" value="TUDOR DOMAIN-CONTAINING PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08585">
        <property type="entry name" value="RMI1_N_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01161">
        <property type="entry name" value="DUF1767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecQ mediated genome instability protein 1 OB-fold" evidence="4">
        <location>
            <begin position="105"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="246"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="311"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="353"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="444"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="287"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="311"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="460"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08585"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW10328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="477" mass="53206" checksum="16AFC46B54E363E6" modified="2014-02-19" version="1">MYGPDSDNIGVKVLRSVAGRVEVEHTWRMEENWRGCNSGMVLETLTQRGWCLEDTDQLKAIIHIQSALADEHSQFLRCVESELLNSDLRSIGAKSLPQPSLLRNASSLHGPKVLQITSVRDISQSSVDEFLRNSGSRRVLRLGLTDGHSEITAVEYSHVPSIPDNVVPGTKIRLENKVVVRSGIVCLNPKVLTVLGGVVQSLYDEWEMNKKYSGFSRSSLKKLENRDTGGPPQFVKLQVGSYSGITDYNSSRSHKPIADVGEAEKRQTGIADYNSSRNRKPIAMLGTTETRPTDIQQGPNQKADILDANQESNLPQQRAQDKASSSGTRPKEVVESVPVQNQAAAQKLLQKLNQPSQNDRRGRGWKHRGKGKEDDPVVFTLEEYENRKAQTKLTNIEKDRYISHDEDFARHLQNQLNLEDSRVGLGLGTYEAKAQDIRISMFTYERDSDSSHQMAQGGRGRGRGRGRGRGRGRGRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1T6</accession>
    <name>V7B1T6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G241200g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">Interacts with MAGO1 and Y14B.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1T6"/>
    <dbReference type="SMR" id="V7B1T6"/>
    <dbReference type="STRING" id="3885.V7B1T6"/>
    <dbReference type="Gramene" id="ESW10828">
        <property type="protein sequence ID" value="ESW10828"/>
        <property type="gene ID" value="PHAVU_009G241200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0328">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRFHDFK"/>
    <dbReference type="OrthoDB" id="10265785at2759"/>
    <dbReference type="PhylomeDB" id="V7B1T6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18045">
        <property type="entry name" value="DEADc_EIF4AIII_DDX48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000031">
        <property type="entry name" value="Eukaryotic initiation factor 4A-III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000498">
        <property type="entry name" value="Eukaryotic initiation factor 4A-III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="14">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="12">
        <location>
            <begin position="64"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="13">
        <location>
            <begin position="245"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="11">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00064930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW10828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="406" mass="45960" checksum="2D92EEC52D1ABE48" modified="2014-02-19" version="1">MATTSVVPANRRRAVNAADDMDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKVILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2E2</accession>
    <name>V7B2E2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G082300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM14 family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW12072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2E2"/>
    <dbReference type="SMR" id="V7B2E2"/>
    <dbReference type="STRING" id="3885.V7B2E2"/>
    <dbReference type="Gramene" id="ESW12072">
        <property type="protein sequence ID" value="ESW12072"/>
        <property type="gene ID" value="PHAVU_008G082300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ5P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMQGISK"/>
    <dbReference type="OrthoDB" id="768548at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009706">
        <property type="term" value="C:chloroplast inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015245">
        <property type="term" value="F:fatty acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1740">
        <property type="entry name" value="Transmembrane protein 14-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005349">
        <property type="entry name" value="TMEM14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044890">
        <property type="entry name" value="TMEM14_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12668:SF43">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 14 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12668">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 14, 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03647">
        <property type="entry name" value="Tmemb_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="310" mass="33764" checksum="BCA7F9DEB6172565" modified="2014-02-19" version="1">MDSVSVLNPKLAHCNFSLPFNKSPRTFNFHPLLKPRALNAAPPNALAASFLTIHRRKPSTVAFTASHQDSEHGEIEVEKERDVIAGSEESQKAWKQALETFKEQAERLQGVSQDAYKLYSEKASVILKETTEQLTVLADKTKHELSTAAKEITDEGKEYLSSAAESSPEVKDIVETFTTPSDDIQKLSGLRDFYVGLPYGLLLSLGGFLYFMVTGSVSAIRFGVILGGALLALSILSLKSYKKGRASPLALKGQAAIASILFLREISAIGKGSSYFTALISGAVAAFYIYRIVLERNQQNGSNLETEPGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3R8</accession>
    <name>V7B3R8_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G091700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3R8"/>
    <dbReference type="STRING" id="3885.V7B3R8"/>
    <dbReference type="Gramene" id="ESW12185">
        <property type="protein sequence ID" value="ESW12185"/>
        <property type="gene ID" value="PHAVU_008G091700g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="66" mass="7938" checksum="51B135FBEC9FF8BE" modified="2014-02-19" version="1">MKFLVEETQNSREVQPLGLFTIFLDDLWWDDGKFRKLHIPCPYVFTSCKHAHNDFAMYNIIVYILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3U9</accession>
    <name>V7B3U9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G0952002g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell envelope</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3U9"/>
    <dbReference type="STRING" id="3885.V7B3U9"/>
    <dbReference type="Gramene" id="ESW12225">
        <property type="protein sequence ID" value="ESW12225"/>
        <property type="gene ID" value="PHAVU_008G0952002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWHTYNT"/>
    <dbReference type="OrthoDB" id="1436052at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
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        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051848">
        <property type="entry name" value="PGIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48059:SF30">
        <property type="entry name" value="OS06G0587000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48059">
        <property type="entry name" value="POLYGALACTURONASE INHIBITOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="175" mass="19167" checksum="1949CE45AA06230D" modified="2014-02-19" version="1" fragment="single">IFPEKIFQVTTLSDIDLSYNDYLNGSLPGLPLNGSLQKLIVSHTRLSGALPTSIGSITCAHFEGLRKLVQIDLQDNLLDGNIPSSLFALPSVQRIDLSNNHFSGQLDEFSNISSSMLESLDLRSNNLEGPIPASIFNLTSLIVLQLSFNKLNGTIKLDVIQRLPKLNKLALSHNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3Y3</accession>
    <name>V7B3Y3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G042400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3Y3"/>
    <dbReference type="STRING" id="3885.V7B3Y3"/>
    <dbReference type="Gramene" id="ESW11583">
        <property type="protein sequence ID" value="ESW11583"/>
        <property type="gene ID" value="PHAVU_008G042400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV7U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VQMITVA"/>
    <dbReference type="OrthoDB" id="1862401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051504">
        <property type="entry name" value="Plant_metabolite_acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31625">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="473" mass="52831" checksum="7C9A9ADBC6D928DB" modified="2014-02-19" version="1">MKIHEQCTVAPPPSATKTSLTLTFFDLFWLRIHPLELTFFYSLASQQSNPSFFFANVVPKLKTSLSHTLQHFLPLAGNVVWPSDSPKPFVQFTPGDAVSVVVAESDAEFDQEIDYSPRETAPTRPFIPHLHSSESLASVMSIQITLFPNKGFSIGMNIHHAVLDGKSAAMFIKAWAFLCQTQTNDETQIPSLVPELLPSFDRTLVKEPAHLRPFFTENLTGFLSNTYPQDNSDGRCLKILDFPPKDAVRATFVLTGGDLEKIKRRVLSKWEVVEESNSTVSSKLPNLSSFVVTCAYVAVCIAKAIHGVEREKDKFAFGFAADWRFRSEPRIPDNYFGNCVWNNLVDADPLDFLEEEGVVLVAKRIHRKVKMLGQETVLLEGFSQFVDLMKQGVQIIGVTMSNRFGVYDTNFGFGKPSKVEITSLDRNSSQTFGLVESKDGGVEVGMVMNKHAMDLFATLFRQGLCHDDHESSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4N0</accession>
    <name>V7B4N0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G028500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4N0"/>
    <dbReference type="SMR" id="V7B4N0"/>
    <dbReference type="STRING" id="3885.V7B4N0"/>
    <dbReference type="Gramene" id="ESW11421">
        <property type="protein sequence ID" value="ESW11421"/>
        <property type="gene ID" value="PHAVU_008G028500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSEFCYP"/>
    <dbReference type="OrthoDB" id="1658195at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000920">
        <property type="entry name" value="Receptor-like protein kinase ANXUR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000742">
        <property type="entry name" value="Receptor-like protein kinase ANXUR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003">
        <property type="entry name" value="OS07G0166700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003:SF303">
        <property type="entry name" value="TYROSINE KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="2">
        <location>
            <begin position="47"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="347" mass="39582" checksum="407DC72DF82A7918" modified="2014-02-19" version="1">MFLNCLGMCCSKPTTNTTSSQRQFPTLIEELCHQFSLTDLRKATNNFDQKRVIGSGIFSEVYKGCLQHDGASDYPVAIKRFHYQGWEAFNKEIELLCQLRHPRCVSLIGFCNHQNEKILVYEYMSNGSLDKHLHDGELSWKKRLEICIGVARGLHYLHTGAKRSIFHCILGPSTILLDDHMEPKLAGFGVSVQGSRFMSKQKQINVDHILGTWGYPATDYIMDGTITAKWDVFTFGFLLLKVVSRGMFYLISLTEKECLENPVEERIDPIIKGKIAPDCWQLFVDMMVTCLKYEPDERPTIGEVEVQLEHALSMQEQADITNSNSEYTLLSKTIISLGVKQFDTKEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5Y0</accession>
    <name>V7B5Y0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Rx N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G066900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5Y0"/>
    <dbReference type="STRING" id="3885.V7B5Y0"/>
    <dbReference type="Gramene" id="ESW11881">
        <property type="protein sequence ID" value="ESW11881"/>
        <property type="gene ID" value="PHAVU_008G066900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1934998at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098542">
        <property type="term" value="P:defense response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23155">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23155:SF1076">
        <property type="entry name" value="LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="3">
        <location>
            <begin position="103"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="4">
        <location>
            <begin position="224"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="493" mass="58032" checksum="32CDAF551F79E483" modified="2014-02-19" version="1">MHTKMNLYKLLDTLAEVYDHLRKLDRRKLDEDMDDICKRIRDSAHKLLPMDGFVDSSKEENHNGGQKFHSSQQLQQPLQKKWTWTDYHRLDSLPKDIMKTLLIFPENAVIRKRNLINLWIGEGVVEGTENKIAEKLGEDLIDELLCSKVILRYGNGKGPSINKFGILPDFRRQMELFVTRKDVHHDGYIFRVSPFRNTRLNWLKLEQKEVTLASYLNYRPQWVKKFMNLEVLQLGRWQDSPLHHIEVGSEEFLKELRYLTQLKYLSLRGISRIFQLPSSIVKLEKLLILDLKACHNLETLPNDISLMKSLTHLILSQCFLLEVLKGFVINTPEKTSCRIPHLVYLKKLRKLSIHIGREAMIRDREFTTLEMFLALERLKISWSNSDLRYANILIGLPPNLMKLHLECFPGKSLRGCLYGERHLGKCMELNITGGKLESMEVDFKSYNLDILRLKYLKKLNVDINYLKLLFPMLKYAEIKQISNHSYTEHEWPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B809</accession>
    <name>V7B809_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G159200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B809"/>
    <dbReference type="STRING" id="3885.V7B809"/>
    <dbReference type="Gramene" id="ESW12998">
        <property type="protein sequence ID" value="ESW12998"/>
        <property type="gene ID" value="PHAVU_008G159200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUZ8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CETENYV"/>
    <dbReference type="OrthoDB" id="643388at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000009">
        <property type="entry name" value="NAC domain-containing protein 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044799">
        <property type="entry name" value="SOG1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31079:SF2">
        <property type="entry name" value="NAC DOMAIN CONTAINING PROTEIN 44-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31079">
        <property type="entry name" value="NAC DOMAIN-CONTAINING PROTEIN 73"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="6">
        <location>
            <begin position="55"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="219"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="244"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="394" mass="44354" checksum="E49ECB15FB7F8ED0" modified="2014-02-19" version="1">MARSWLIDFGGFAKKVKSNSLSSADQIKDCGAYRECPNCHYRIGNSDVSGEWPGFPLGVKFDPSDVELLEHLSGKCGVGNTQPDMFINEFITTLEGDQGICYTHPENLQGAKKDGSYFHFFHRTINAYATGQRKRRKIHHQQGVTEEHWRWHKTGKTKAIIENGICKGFKKIMVLHVRSKSGFKPYKSNWVMHQYHLGTEEDEKEGEYVVSKIFYQQQKKTEKNEDNPMVEDPDNIVSRTGPRTPKPNPPNPPRAGNSADCDDYIDETVPLPSAQDTKAILGESLAPISDNHDLDSSAWLAGESQAVEHIEYDGLDDILLCKEILDSSALLNDSGLDSSNLYDLAFYDNQMARNDNESCGISVLDTLELDTPDFDLSNFNFCSQDSILQWMGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B869</accession>
    <name>V7B869_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exocyst subunit Exo70 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G252400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Component of the exocyst complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the EXO70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B869"/>
    <dbReference type="STRING" id="3885.V7B869"/>
    <dbReference type="Gramene" id="ESW14092">
        <property type="protein sequence ID" value="ESW14092"/>
        <property type="gene ID" value="PHAVU_008G252400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2344">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TERFMEC"/>
    <dbReference type="OrthoDB" id="1922221at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000145">
        <property type="term" value="C:exocyst"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005546">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.170">
        <property type="entry name" value="Exocyst complex component Exo70"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004140">
        <property type="entry name" value="Exo70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046364">
        <property type="entry name" value="Exo70_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542">
        <property type="entry name" value="EXOCYST COMPLEX PROTEIN EXO70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542:SF180">
        <property type="entry name" value="EXOCYST SUBUNIT EXO70 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03081">
        <property type="entry name" value="Exo70_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0268">Exocytosis</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="14"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Exocyst complex subunit Exo70 C-terminal" evidence="5">
        <location>
            <begin position="421"/>
            <end position="639"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU365026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW14092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="647" mass="74319" checksum="747DC1D60479256B" modified="2014-02-19" version="1">MLIKIQSRLLQPKVWRFVCFVSSIVGLVCYALSSSFNHLCGDWTWWKIFLYIGFSLFISLSTLFAKPWEFNNSHCLEAHTAFFILLITSVYSFFFDKEVTEKPDSYSLVSSAAFAIMSLGLSRLSHSGFEVDLLYFFSGFLTVQLMKINLWLVIVGGSFSYSLIILRSTLDASARSDYVGFHVHDHVVIEIGSHSQGTSRNFYLKQIDSSQTITNGVGNSLIMPQEVGVPQGDEDSGFRVTQGKNDSSKSITERFMECIEVLKKENETLMDTIWKHVDGYLKTDVVNKIAVVELHIENNLVVDALSVGIINDLHETVLLMLAEGFEGDCCRAYYDCRREFLKDMEDIDKMEKIQSWLRKVLDVVDSVLLPNENTLCDRVFKGASSTEDFVFTEVCSELNISLLRIANHLAAFLKSEKFTYYEGGELHPNISELMRKIRYVCANRDSRSRQGLEKSTMVDKEGKLSPYVNVAREIVTALIDRILEVESKNYHNPSLGYVFVMNNLRVIELQAELYGLVLTFGHGWLRKNTTKFQKNLELYMRSSWNKIVEFLKLDMSESESSVAVGLLKDRLNSFNKHFDEICNVECSWFVFDEELRKNIIKSIENMLLPAYGNFIGKLQKFVGKHSYDYIKYEMFDIQDRVRNLFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8A0</accession>
    <name>V7B8A0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G166600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8A0"/>
    <dbReference type="STRING" id="3885.V7B8A0"/>
    <dbReference type="Gramene" id="ESW13083">
        <property type="protein sequence ID" value="ESW13083"/>
        <property type="gene ID" value="PHAVU_008G166600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS83">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNYNMSN"/>
    <dbReference type="OrthoDB" id="1892656at2759"/>
    <dbReference type="PhylomeDB" id="V7B8A0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11299">
        <property type="entry name" value="O-FucT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024709">
        <property type="entry name" value="FucosylTrfase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31288:SF8">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31288">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009360">
        <property type="entry name" value="UCP009360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW13083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="582" mass="65552" checksum="0669F3940C795F3E" modified="2014-02-19" version="1">MKSKAGGSGLTSEATGGGGGSSSSPSPPPSPRRQSGVTRCRRRVRPAKDSSESRRLVAVIMARRSLRYFFLLPVVYISGLLMCVGPFSALIGHTPLPGSRYRSHEIFHNLLHHIETDNSSVIELASVWKYKRKLREQKPCPNLTALHREHFVSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQFEFHNVWKDPSEFGDVYDEDHFISTLDGYVKVVKELPEALMERHNYNMSNITNIKVQAWSPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYKALRFSFSISALANKLVYRMIEKSSRTDGKYIAVHLRFEEDMVAFSCCVYDGGEAEKLEMDSVREKGWKGKFKRKDRIILPDLNRVEGKCPLTPLEVGMMLRGMGFDSNTSIYIASGKIYHAERYLAPLMKMFPYLYTKESLATSDELAPFMGYSSQLAALDYTVCLSSEVFVTTQGGNFPHFLMGHRRFLYGGHAKTIIPDKRKLVVLLDDLSISWRAFKDQMEDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLANQIDNNNDVLYNYNGTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8R4</accession>
    <name>V7B8R4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">B-like cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G180000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Interacts with the CDC2 protein kinase to form a serine/threonine kinase holoenzyme complex also known as maturation promoting factor (MPF). The cyclin subunit imparts substrate specificity to the complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclin family. Cyclin D subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8R4"/>
    <dbReference type="SMR" id="V7B8R4"/>
    <dbReference type="STRING" id="3885.V7B8R4"/>
    <dbReference type="Gramene" id="ESW13243">
        <property type="protein sequence ID" value="ESW13243"/>
        <property type="gene ID" value="PHAVU_008G180000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0656">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPLCMCL"/>
    <dbReference type="OrthoDB" id="5590282at2759"/>
    <dbReference type="PhylomeDB" id="V7B8R4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd20543">
        <property type="entry name" value="CYCLIN_AtCycD-like_rpt1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd20544">
        <property type="entry name" value="CYCLIN_AtCycD-like_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000034">
        <property type="entry name" value="D2/4-type cyclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000040">
        <property type="entry name" value="D6-type cyclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048258">
        <property type="entry name" value="Cyclins_cyclin-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00292">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 7" id="KW-0195">Cyclin</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin-like" evidence="9">
        <location>
            <begin position="101"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin C-terminal" evidence="10">
        <location>
            <begin position="198"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="330"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="340"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW13243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="355" mass="39732" checksum="1EF9EE07AA6514FE" modified="2014-02-19" version="1">MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWEHPIYDRNHSQIENLDVQYVSFPLPSDECLRLMMETELHHLPNGDYVSRLRSGDLDIGARKEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPKQRAWTMKLLAVGCVSLAAKMEETDVPTSLDLQVGESKYIFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDQAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGEGQTVHTEKASSDLIQPVGKERVLKCVKMIQELSSDSGSAKDAIPSVSVPSVPESPIRVLNNACFSYKSDDPNAAPCANSSHNDSPDAKRRKLDKTFGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B979</accession>
    <name>V7B979_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G280500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the EMC8/EMC9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B979"/>
    <dbReference type="SMR" id="V7B979"/>
    <dbReference type="STRING" id="3885.V7B979"/>
    <dbReference type="Gramene" id="ESW14432">
        <property type="protein sequence ID" value="ESW14432"/>
        <property type="gene ID" value="PHAVU_008G280500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3289">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHCAING"/>
    <dbReference type="OrthoDB" id="194468at2759"/>
    <dbReference type="PhylomeDB" id="V7B979"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072546">
        <property type="term" value="C:EMC complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08060">
        <property type="entry name" value="MPN_UPF0172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005366">
        <property type="entry name" value="EMC8/9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12941">
        <property type="entry name" value="ER MEMBRANE PROTEIN COMPLEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12941:SF10">
        <property type="entry name" value="ER MEMBRANE PROTEIN COMPLEX SUBUNIT 8_9 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03665">
        <property type="entry name" value="UPF0172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MPN" evidence="2">
        <location>
            <begin position="8"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW14432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="204" mass="22910" checksum="3845102347D1098B" modified="2014-02-19" version="1">MGSNGLRYEIAQNAYIKLVLHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLILIEEYFSAKGLNIVGYFHANERSDDSELGSVAKNIGDHICRYFPQAAVLLLDNKKLDALKKSKERSAIMQLYVRDTNKNWKLVPSDANNRFSLREPSANVVLLDYIATEKWNGIVDFDDHLDDISKDWLNPGLFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9W1</accession>
    <name>V7B9W1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G180800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9W1"/>
    <dbReference type="SMR" id="V7B9W1"/>
    <dbReference type="STRING" id="3885.V7B9W1"/>
    <dbReference type="Gramene" id="ESW13251">
        <property type="protein sequence ID" value="ESW13251"/>
        <property type="gene ID" value="PHAVU_008G180800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXWD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SNYCANH"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="PhylomeDB" id="V7B9W1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF122">
        <property type="entry name" value="OS02G0760500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="108"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="179" mass="19110" checksum="F67BB3B9D590E225" modified="2014-02-19" version="1">MLGGGNLSRVLVSVDGSEESMKALRWALNNLKLRSPTPNSTDAPSFIVFHVQSPPSIATGLSPGAIPFGGPSDIEVPAFTAAIEAHQERITRAVLDHALGICSEFNLSSQVRTHVVVGDPKEKICEAVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHASCPVIIIKENDSVNKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAN9</accession>
    <name>V7BAN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_007G0313001g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAN9"/>
    <dbReference type="Gramene" id="ESW14947">
        <property type="protein sequence ID" value="ESW14947"/>
        <property type="gene ID" value="PHAVU_007G0313001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICPERES"/>
    <dbReference type="OrthoDB" id="544400at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="81"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW14947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="198" mass="22374" checksum="0B5B28B9AE8306FC" modified="2014-02-19" version="1" fragment="single">ITTGITNKNKTTMVKIASTVGVVGIVVLVVLVWWFRTKIFPSSLLFWRENRTNNVIQEFLKEQGPLPITRYNYSEIKKMTNSFKNKLGQGGFGSVYKGKLHDGSVVAVKILVEAKGNGQEFINEVASISRTSHVNIVRLLEFCFHGSKRALIYEFMLNGSLNKFIYEQKNLLQVSHQLDCKILYNIAIGIARGLEYLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB76</accession>
    <name>V7BB76_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ACT domain-containing protein ACR</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Protein ACT DOMAIN REPEATS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G0220000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds amino acids.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB76"/>
    <dbReference type="STRING" id="3885.V7BB76"/>
    <dbReference type="Gramene" id="ESW14845">
        <property type="protein sequence ID" value="ESW14845"/>
        <property type="gene ID" value="PHAVU_007G0220000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVJY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DADYIPM"/>
    <dbReference type="OrthoDB" id="496180at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040217">
        <property type="entry name" value="ACR1-12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096:SF60">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24931">
        <property type="entry name" value="ACT_ACR9_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="141"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW14845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="218" mass="23997" checksum="7DF9521FA5AB2145" modified="2014-02-19" version="1" fragment="single">KSSDNPDSVPMPIVLIDQDSDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFITQSNTGRKVEDPDMLERIRLTIINNLLKFHPESSELLAMGEVFGIKSPKKKSNEDIKTHIQVKEDGPKRSLLCIETADKPGLLVEIIRVIADVNIDVESAEIDTEGLVAKDKFHVSYGGAALNSSMSQVLVNCLRYYLRTPDTDIDSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD76</accession>
    <name>V7BD76_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G280400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD76"/>
    <dbReference type="STRING" id="3885.V7BD76"/>
    <dbReference type="Gramene" id="ESW14431">
        <property type="protein sequence ID" value="ESW14431"/>
        <property type="gene ID" value="PHAVU_008G280400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2262">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVWHTGL"/>
    <dbReference type="OrthoDB" id="9986677at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035673">
        <property type="term" value="F:oligopeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004648">
        <property type="entry name" value="Oligpept_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004813">
        <property type="entry name" value="OPT"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00727">
        <property type="entry name" value="ISP4_OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00728">
        <property type="entry name" value="OPT_sfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22601">
        <property type="entry name" value="ISP4 LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03169">
        <property type="entry name" value="OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0571">Peptide transport</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="123"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="156"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="254"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="285"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="360"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="426"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="453"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="538"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="610"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="659"/>
            <end position="677"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="689"/>
            <end position="709"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="746" mass="83162" checksum="F8B4C68B89C6654F" modified="2014-02-19" version="1">MDELQDNKHHSKLVISEESDEVDDSPIEQVRLTVPITDDPTQPVLTFRTWTLGLASCIVLAFINQFFGYRTTPLSISSVSAQIISLPLGKLMARTLPTKVFTLPFTNWSFSMNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRNIHPVAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFLLVFVSSFAYYIIPGYLFPGLATISWVCLVWKKSILAQQIGSGITGLGIGSFGLDWNTVAGFLGTPLAVPGFAIINILVGFVLFMYVLIPISYWNNVYDAKKFPIISSKTFDSTGAKYNVTRILNAANFDINMDNYNNYSKLYLSITFAFDYGLSFATLTATISHVALFHGKTIVQMWKKTTSALREKGFGDVHTRLMKKNYEQVPEWWFVSILVLMVVVALITCEGFGKQLQLPWWGVLLSLVIALVFTLPIGVIQATTNMQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIVQLVGTIVASGVYFGTAWWLLTTVPNICDQTKLPDNSPWQCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLIGAVLPVPVWILARKYPNQKWIELINMPLIIAGAGGIPPARTVNYTTWGMVGIFFNFFVYYKFKAWWARHTYILSAALDAGLAFMGVVLYFALQSYDNLGPAWWGADADHCPLAKCPTAPGVIAPGCPTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDH3</accession>
    <name>V7BDH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">PRA1 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G109100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the PRA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDH3"/>
    <dbReference type="Gramene" id="ESW15867">
        <property type="protein sequence ID" value="ESW15867"/>
        <property type="gene ID" value="PHAVU_007G109100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3142">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WYFLYFS"/>
    <dbReference type="OrthoDB" id="63113at2759"/>
    <dbReference type="PhylomeDB" id="V7BDH3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004895">
        <property type="entry name" value="Prenylated_rab_accept_PRA1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19317:SF81">
        <property type="entry name" value="PRA1 FAMILY PROTEIN D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19317">
        <property type="entry name" value="PRENYLATED RAB ACCEPTOR 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03208">
        <property type="entry name" value="PRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="104"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="169" mass="18638" checksum="0E85CF94B0CBC327" modified="2014-02-19" version="1">MLPSAEMLANIKEATQTVASTRRPWRLFLDLSALTFPSSISETTTRLAHNVTYFLFNYALLLLLIFLLLLFPNALPLLLFLLLSAAWYFLYFSRDDLHLAIVPLALLTLVALFATGAWLNLLLALLIGALVVFLHGVLRSTDDLIGDDQESPYGPMLGDTPASGAYVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDR7</accession>
    <name>V7BDR7_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G119300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDR7"/>
    <dbReference type="STRING" id="3885.V7BDR7"/>
    <dbReference type="Gramene" id="ESW15979">
        <property type="protein sequence ID" value="ESW15979"/>
        <property type="gene ID" value="PHAVU_007G119300g"/>
    </dbReference>
    <dbReference type="OMA" id="ESEIWEQ"/>
    <dbReference type="OrthoDB" id="1933309at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37198">
        <property type="entry name" value="NUCLEOLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37198:SF1">
        <property type="entry name" value="NUCLEOLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW15979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="108" mass="12322" checksum="DC8CB0459F34EA5E" modified="2014-02-19" version="1">MIPSKNTAKRKKTLFYSTTVQNSQKNIVPFGQVVLEDENLWKQINVIRKIVGYEGRKEASCADELKALYIFTGVEPPTSLHENSIHPLEIKEKLQFLMCILGIKSNET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFK1</accession>
    <name>V7BFK1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G147600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>indigoferoid/millettioid clade</taxon>
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        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7BFK1"/>
    <dbReference type="STRING" id="3885.V7BFK1"/>
    <dbReference type="Gramene" id="ESW16330">
        <property type="protein sequence ID" value="ESW16330"/>
        <property type="gene ID" value="PHAVU_007G147600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="PhylomeDB" id="V7BFK1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="Transcription factor RAX3"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
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    </dbReference>
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        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
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        <property type="entry name" value="MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48000">
        <property type="entry name" value="OS09G0431300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="9"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="9"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="63"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="63"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="129"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW16330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="312" mass="34025" checksum="B7CE52CC232A51FD" modified="2014-02-19" version="1">MGRAPCCDKANVKKGPWSPEEDEKLRGFIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNLKHGEFSEDEDRIICTLFGSIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMVGTMNPSALKKPHQVTLSSMLQNSTPSSSSSSSSFSLKNNHNSNYQQPYVPFTGSEAISYASLLSGNSSSTPACSSFERLYQVNCGFMLGGETSCSSSSDGSCKKNQMSDVKEGEVGYVGVGGFGDQIGGLSYLSSGVEDTQKLVSSNAGRASGWTGEESPLDYGLEEIKQLMSTGSCNNFMFDDSKTGEMVMYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG02</accession>
    <name>V7BG02_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">SLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G072000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG02"/>
    <dbReference type="STRING" id="3885.V7BG02"/>
    <dbReference type="Gramene" id="ESW15426">
        <property type="protein sequence ID" value="ESW15426"/>
        <property type="gene ID" value="PHAVU_007G072000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ5K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KIPNCHR"/>
    <dbReference type="OrthoDB" id="2020668at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33740">
        <property type="entry name" value="GPI-ANCHORED ADHESIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33740:SF3">
        <property type="entry name" value="GPI-ANCHORED ADHESIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="317"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="751"/>
            <end position="782"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="317"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="925" mass="102537" checksum="42314ABEA33AF146" modified="2014-02-19" version="1">MASMITAPNSLQIRLAFTHTNSTKINPILFHTRLSHVDHRRRIRLLCVANHGNGSGSAPIRVGSDDRCVSEFKKNESYGGVVGVGVSGIFLLSGIAFVAFLVSRPTDARQVKPLPTHQEVLLSSDDCNDKTEHANADNTVEQGNINVEGQIHISRYCSSPESDKIPNCHRIVNDSDIESELVHDIHNMDNNADAIICISVQEELQHGSVDDESVVSKEGTVAFNDPESESPIDSLDSYKFKDFDSSTSVESENSITELKENPSFVEPRNISNFDAEPLPVISEQQDEIIGSSVNRSSAIFNTSSFVADNESVLVNINGSTQSNKTTSDPEVFPEEDDPSVSTKANLDLNNMLQVLDRSSLEEQNFSENDLFTKSFVSSTNTSVDGQVRNDNNEVNKGRSESSISGAFYSAPGIPAPSVVSASVQVLPGKVLVPAVVDQGQGQALAALQALKVIEPDVQPSDLCTRREYARWLVSATSALSRKTNSKVYPAMYIDNVTELAFDDITPEDPDFSSIQGLAEAGLIESRLSRCHRQLFTDEHYVPFYFSPESPLSRQDLVSWKMVLEKRQFPEADGKMLYRLSGFIDANKIHSDALPALVADVSAGERGITALTFGYTRLFQPHKPVTKAQAAVALATGDAFDIVNEELPRIEAESMADKAVAFHRALVAQVEKDINASFEQKLSIEREKINVVERMAKEATCELERLRAEREEDIISLIKERAAFESERVVFSRLRHEANDHLQNLMSDKVEIAYEKKRISKLRELAENEKKEFKRLLYELEVERKALSMARAWAEDEAKVVSAYAVGLERARDRWGRNGSKVVGDDFLKYSTGVTLHNHEEQFSVQDIIDRGDNLLDKLKKMAADMGGRARDMIDKIILIISQFVSRLEEWASKTGKQAENVIAKAGKSAHEMQKGGAEFGFTIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG11</accession>
    <name>V7BG11_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G186200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG11"/>
    <dbReference type="STRING" id="3885.V7BG11"/>
    <dbReference type="Gramene" id="ESW16809">
        <property type="protein sequence ID" value="ESW16809"/>
        <property type="gene ID" value="PHAVU_007G186200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRIY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLYWDFS"/>
    <dbReference type="OrthoDB" id="1913958at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008586">
        <property type="entry name" value="DUF868_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31972:SF6">
        <property type="entry name" value="DUF868 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31972">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05910">
        <property type="entry name" value="DUF868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="287"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="299"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="36706" checksum="0DEAFC62804EEBF0" modified="2014-02-19" version="1">MIPACFSQPNTPPSSSTTQVPQNLVTCIYQTQICNSPTYLTLTWFRTLLSHSLTIYAPHTFSITITLNPSTFSFFRTRPGSKSIYLTRPHKRSQKIKLHWDFSAALFSTRNSAEPESCFYLAICCNGRVEFFLGDLFLILPLQLSTHQTSDQTLMSRREHVFGSTSYVSRGEFMGSKREIEIELCSGEVLRVKMDGQVCVVVKRLAWKFRGNEKIFIDGVEVEFYWDVLSWVVDSENGNGYGVFVFQVGDGGAVWPEMVGPEKKLMKKRLMGPTMASSIATLSPSSSGVLQWTEESSDGGRSSCSSSTRSCGSSNGGFSLLLYAWRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG97</accession>
    <name>V7BG97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G190100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MYB-CC family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG97"/>
    <dbReference type="STRING" id="3885.V7BG97"/>
    <dbReference type="Gramene" id="ESW16852">
        <property type="protein sequence ID" value="ESW16852"/>
        <property type="gene ID" value="PHAVU_007G190100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16853">
        <property type="protein sequence ID" value="ESW16853"/>
        <property type="gene ID" value="PHAVU_007G190100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QXMH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SDWPEWA"/>
    <dbReference type="OrthoDB" id="551907at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025756">
        <property type="entry name" value="Myb_CC_LHEQLE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046955">
        <property type="entry name" value="PHR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31499:SF80">
        <property type="entry name" value="HTH MYB-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31499">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR PHL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14379">
        <property type="entry name" value="Myb_CC_LHEQLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="254"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="394"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="422"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="394"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="471" mass="51968" checksum="AD960EFB1A4B93FC" modified="2014-02-19" version="1">MEAHPTFSIERSKQLNNMGMSGALSSSLSVLPIPSEDMYLRLPESQLDIVEQDLVTRPFTHSSYLNSNGVVGHIFSSSPGYSTDLHHSSLSPDEKHSTNAHFISQSSTNISQFPLSYSSNTGPPNSATPSHFSKGNSASWHTGSLPNFLDFPAHDSIDDNRVESSACPIMASEEYGKQNDWQEWAERLISDDDTLTSNWDDLLTDNIQDIEPKVPFQVAKPLSQFPGHQCQGQQQLPASFVDNCIGLSCSANSTPAKSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVTEKKGSSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGTETLKASSSTIETQSGVSSNATRDFPVKSVLEASQGPDQANGSTPVEEGSLEKVGNPDSPKTQHAIASGDSAQAPKRQRTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGG0</accession>
    <name>V7BGG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">WAT1-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G194500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW16912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGG0"/>
    <dbReference type="SMR" id="V7BGG0"/>
    <dbReference type="Gramene" id="ESW16912">
        <property type="protein sequence ID" value="ESW16912"/>
        <property type="gene ID" value="PHAVU_007G194500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRZQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QLWCNKK"/>
    <dbReference type="OrthoDB" id="1728340at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030184">
        <property type="entry name" value="WAT1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31218">
        <property type="entry name" value="WAT1-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="184"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="243"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="280"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="7">
        <location>
            <begin position="19"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="7">
        <location>
            <begin position="186"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW16912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="370" mass="41438" checksum="889EAC9B1EFB2EA7" modified="2014-02-19" version="1">MSNNERAFGVMCVKFKPHLLMCVIQLLLSFLYFLVEASLNKGMNPHVFVTYRHVVGGIVVLPFAYVRERKLWPKLTMTMFIELFFLSLFGTSLTLNMFFASLKYTTPSFDASMTNTISSLTFIIAVALRLEVVDVKKPRGVAKVFGTVLSLFGAFIMTLYKGHTIQSLRGAPFHVRGNFVHNNWIKGSLLAGASCISWSLWFILQAIIAKKYQAQLSLTAWINCMGAAQSAVFAVLVQHKPRAWFITSTVELCCILYAGAICGGLIIFIQFWTAEQKGPVFVSMFNPLGTILVAILAYFLFGEQLHTGSLLGVVIVIIGLYLLLWGKDSDQDYNSQQSLATHVEQRECRTQVKIAMEKEVPQRNVSQDTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH77</accession>
    <name>V7BH77_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G139200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH77"/>
    <dbReference type="SMR" id="V7BH77"/>
    <dbReference type="STRING" id="3885.V7BH77"/>
    <dbReference type="Gramene" id="ESW16228">
        <property type="protein sequence ID" value="ESW16228"/>
        <property type="gene ID" value="PHAVU_007G139200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYAZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RECDLIH"/>
    <dbReference type="OrthoDB" id="1926156at2759"/>
    <dbReference type="PhylomeDB" id="V7BH77"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012862">
        <property type="entry name" value="DUF1635"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33431:SF2">
        <property type="entry name" value="CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33431">
        <property type="entry name" value="ENABLED-LIKE PROTEIN (DUF1635)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07795">
        <property type="entry name" value="DUF1635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="91"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="139"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="30239" checksum="8154808BD9B47575" modified="2014-02-19" version="1">MEYERSPLSWEFHYQEEGLEDLKHSLLYTTLELEATIASAKEEITRRECDLIHVNDLLSRVTKERDEAQAKCQKLMLEKLELQQQLQQKQQLEQHQHQNQQQLGQTHQRDTTSQSEEELQEGFSEKHSMPAASSDCEESSMPSSGGSSTPHPTPLQVVLELAEKKPLPEKGKLLKAVVEAGPLLQTLLLAGPLPQWQHPPPQLNSIEIPPVAISPQDSSKSTFHFNKKRDLVLSAVTDCPVSKSRKVITQHLPTPTTASHNSLSHPSFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKL9</accession>
    <name>V7BKL9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G252500g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKL9"/>
    <dbReference type="SMR" id="V7BKL9"/>
    <dbReference type="STRING" id="3885.V7BKL9"/>
    <dbReference type="Gramene" id="ESW17595">
        <property type="protein sequence ID" value="ESW17595"/>
        <property type="gene ID" value="PHAVU_007G252500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTPYSNC"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 13" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754655" description="Protein kinase domain-containing protein" evidence="13">
        <location>
            <begin position="27"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="315"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="343"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="621" mass="70049" checksum="F8BF8C3A5532B2F2" modified="2014-02-19" version="1">MKNQEPFQALFFLSTLVLLFISSAKGKCPPSFLCGNLGTMYFPYTDTKHPHCGLLVIHGCVDRDPDAVKTIKNKGEWFYITRDSSTQTLLFRDDDLRTLLLTRRCGVFSKNYTSLDTSSPFLSLQFTTVTLFTCNRTLNITPPSSAFSKSTICPNEDIFYGTSKVDESFSYGSEDIPDSYFELCSKIRLPIRDAELVPNSNGSLFDYVSADIPVRTEVSNPCSSCYRLRGGQCQLDSQGKFFCIQEKTSRKVKIVVAATSAAGALGILMVLACILRRYYCHKKNPTYIMIENFLKQHGHLSAKRYSYLEVKKMTNSFKNKLGQGGFGTVYKGRLQNGSFVAVKVLSKLKGDGEEFINEVASISMTSHVNIVSLLGFCLEGSKRFLIYEYMPNGSLEKFIYEEKDPSRLKLTLHCTTMYSIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTIGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNCRVDFPSEDYFPHWIYNHLESNEDLQFRCTKNQNDEEMVRKMIIVSLWCIQTDPSNRPAMSKVVKMMEGSIRSLQIPPKSFLFSSSVPQSQSSDSSGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMF3</accession>
    <name>V7BMF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">START domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G266400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMF3"/>
    <dbReference type="SMR" id="V7BMF3"/>
    <dbReference type="STRING" id="3885.V7BMF3"/>
    <dbReference type="Gramene" id="ESW17766">
        <property type="protein sequence ID" value="ESW17766"/>
        <property type="gene ID" value="PHAVU_007G266400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV1V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANNVMPM"/>
    <dbReference type="OrthoDB" id="17317at2759"/>
    <dbReference type="PhylomeDB" id="V7BMF3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34560">
        <property type="entry name" value="POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34560:SF8">
        <property type="entry name" value="START-LIKE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="491"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="494"/>
            <end position="515"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="617" mass="69772" checksum="F5D355DD990B08E5" modified="2014-02-19" version="1">MEKKRKIVQYRERLDRTLASPDLTNDDLLKKLVRSQLLPSLKPEVEGYKDQLVETKTAEVSHFLHMLRSVSSDDSGRSNTSHTDWKLKQDGEEFRVMYREGSEGSPFHTMLVEGFVDGPVDVCLCISWETHLYKKWWPQSTVPTFKILSTECLQKVGIGEQLSLVRMKVSWPLSMREAVVHYYLFEYFQDDLIVVLTNSVSDSKNVTNTLYGFNNEVIPEAKDVVRIDLVGGFVLQKVTSERSYFRTIANMDVKLDFVPPSLINFISRQLIGNGFRLYQKAVSSITHGKGEFSKALGDPLYVRIREALCNTSVSKARNGEQLRQVATALPVEDLVESRHEEEKDASKEDISNQYANNVMPMTTYTEELGRSKTFGEIVEVDTEEIVQIEENNKEVKDISIKEVNTSVIRGKRSVYISSEVEHALQTLDKVISMVREQRFHTRASSGVAGEETPFIKNDGRVDSYSLKLTQISSKTDAQVEVAKGDISEGALQEGSATNSSIQNSRYTGTNPNMKEVNSNKVVPTSSEQNLPTAVLSSQAVTYPLENEAIQHQTTISNKLLNTVSVEDVPSDHAEKSSRQKKLNTIVTQDMNSEVPKKVRRQKKVWYLFSALTKRRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BML1</accession>
    <name>V7BML1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_006G102700g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BML1"/>
    <dbReference type="SMR" id="V7BML1"/>
    <dbReference type="STRING" id="3885.V7BML1"/>
    <dbReference type="Gramene" id="ESW19177">
        <property type="protein sequence ID" value="ESW19177"/>
        <property type="gene ID" value="PHAVU_006G102700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YMGGKPP"/>
    <dbReference type="OrthoDB" id="1903759at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000003">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000007">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000058">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000039">
        <property type="entry name" value="receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590">
        <property type="entry name" value="OS03G0124300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590:SF5">
        <property type="entry name" value="OS04G0586500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 17" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0278">Fertilization</keyword>
    <keyword evidence="13" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 17" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 19" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755127" description="non-specific serine/threonine protein kinase" evidence="19">
        <location>
            <begin position="27"/>
            <end position="862"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="516"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="18">
        <location>
            <begin position="462"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="18">
        <location>
            <begin position="476"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="544"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW19177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="862" mass="95810" checksum="68701494EBB92AF0" modified="2014-02-19" version="1">MSFRSKGPLFLVCVLVLLNDIHGAWNEEPGSLILGCGLDGGAEDGDTRKWSPDKKFLGTEGGSITSKASYQDPSLTSEIPYMSARIFTSESTYTFPVKPDKRYWLRLHFYPSLYGSFDPSDAYFSVAANGVTLLTNFSASVTCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKYKGAFAFVNGIQLIQMPDLFDSATLIGYDGQTIDLTTSNLQTMFRLNVGGQFISPVQDSGLTRMWYDDTPYLYGSASGVTNKAEKNVTFDYQGMAEYIAPLDVYSTSRSMGGDKNINMGYNLTWSFRVDTNFMYLVRLHFCEYYYSKINEIVFKIFVNNQTAQEQADVIGWSGGIGVPTYKDYVIYVEDGKTNDLLWLALHPDPDTKPEFYDAILNGVEIFKLNETDLSAPNPLLSDMLLKEHREEEAGVFTHKYIHHSVIGGAAGGAAGFAFMAVLCVAVYNKKKKEPGSESQTGWLPVYSNSNSTKSSKSGKSSANLSAMSQGLCRYFSLQEIKQATKSFDESNVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMSLGTMREHLYKGNKSISTLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMNNDGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPHLPKDQVSLAEWALICKKKGTLEDMIDPCLKGKINQESLKKFVDSAEKCLSDHGADRPSMNDLLWNLEFALNLQENINGPGGSTHSAPTKESELEDISLGENDVARHYKNLGLGSDVDISNDSTENQHEIFSQLVNPQGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPY3</accession>
    <name>V7BPY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G0961002g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPY3"/>
    <dbReference type="Gramene" id="ESW19093">
        <property type="protein sequence ID" value="ESW19093"/>
        <property type="gene ID" value="PHAVU_006G0961002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1327">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1721645at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005544">
        <property type="term" value="F:calcium-dependent phospholipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071277">
        <property type="term" value="P:cellular response to calcium ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd04048">
        <property type="entry name" value="C2A_Copine"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045052">
        <property type="entry name" value="Copine"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857">
        <property type="entry name" value="COPINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10857:SF120">
        <property type="entry name" value="PROTEIN BONZAI 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="82" mass="9460" checksum="10F985001FD650DD" modified="2014-02-19" version="1" fragment="single">LSLSASNLLDRDIASKSDPMVVVFEKKRDGQLEELGRTEVILNCLNPEWIQEISVAFHFEIVQLLEFHVYDIDTKYHSVPTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRA9</accession>
    <name>V7BRA9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G0974001g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRA9"/>
    <dbReference type="STRING" id="3885.V7BRA9"/>
    <dbReference type="Gramene" id="ESW19111">
        <property type="protein sequence ID" value="ESW19111"/>
        <property type="gene ID" value="PHAVU_006G0974001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2020">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IAKRSWG"/>
    <dbReference type="OrthoDB" id="2215036at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042565">
        <property type="term" value="C:RNA nuclear export complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005049">
        <property type="term" value="F:nuclear export signal receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006611">
        <property type="term" value="P:protein export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006405">
        <property type="term" value="P:RNA export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000375">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013598">
        <property type="entry name" value="Exportin-1/Importin-b-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045478">
        <property type="entry name" value="Exportin-5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045065">
        <property type="entry name" value="XPO1/5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223">
        <property type="entry name" value="EXPORTIN 1/5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11223:SF3">
        <property type="entry name" value="EXPORTIN-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19273">
        <property type="entry name" value="Exportin-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08389">
        <property type="entry name" value="Xpo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exportin-1/Importin-beta-like" evidence="1">
        <location>
            <begin position="70"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Exportin-5 C-terminal" evidence="2">
        <location>
            <begin position="277"/>
            <end position="1132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW19111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1167" mass="129818" checksum="10689613BD17CB12" modified="2014-02-19" version="1" fragment="single">IKTGDVRALANTSFLLVKKNWSSEIRLHAYKMLQHLVRLRWEELSPAEHKNFANLSLDLMSEIADPCENWALKSQTAALVAEVVRREDIGLWQEMLPSLISLSNKGPIEAELVAMMLRWLPEDITVHNEDLEGDRRRLLLRGLTQSLSEILPLLYNLLERHFTAAMNEAGRNQMDIAKQHAAAVTATLNAVNAYAEWAPLSDLVEHGIIHGCGVLLSAPDFRLHASEFFKLVSSRRRPTETSVSKFDQAMSNIFQTLMNVSREFLYRSVSSPGSIDEGEYEFAEYICESMVSLGSYNLQSIAGDSTLLPLYLEQMLGFFQHFKFAIHFQSMHFWLVLMRDLMSKPKNSIHSAADSSAVGSTGSGEVENAKKKSLSFVGDDYCGAILDTSFPRMLKREKILHETTTTLGVLELWSEDFECKGTFSLYRSRLLELIRFVSSYKPVIAATKVSEKIDTVIKGFLVSPAPTQDLAVMESMQLAIEGVVNAVFDGSNDFTKTNADVQFSLCRTFEGILQLLISLKWTEPALVEVLVHYLDAMGPFLKHFPDAVGSVINKLFELLTSLPTIIKDTSMHSARHARLQICTSFIRISKAADKSILPHMKGIADTMACLQREGCLLQSEHNLLGEAFLVMASSSGIQQQQEVLKWLLEPLSHQWTQSEWQEKYLSGPQGLVQLCSEAPVMWSIFHTLTFFERALKRSGLKKANWNSENSSTPNSTPINPMASHISWMVTPLLKLLRCIHSLWSPSVSQALPGEVRAAMVMADVERSSLLGEGNSKLPKGSLTVTDGSKVDINKEGYAEPNGSNIRNWFKGIRDSGYNVLGLSTTIGDSFFKYLDVHSVSVALMENIQSMEFRHIRQLVHSTLIPLVKNCPLDMWEVWLEKILQPLFIHAQQALSCSWSSLLQDGRAKVPDALSILSGSDLKVEVMEETILRDLTREICSLLSVIASPPLNNGIPSLEQSGHVSRLDTLKSLDTVASCSMVGFLLKHEGLALPTLRLCLEAFTWTDGESVTKISSYCSVLVVLAIVTNHAELIEYVCKDLFTSIIQGLTLESNAITSADLVAICREIFVYLCDRHPAPRQVLMSLPNITPHDLVAFEESLKKTSSPKEQKQHMKSLLQLATGNKLKALAAQKSVNIITNVSMRQRSSANAPESKVDDGDVVGLAAIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRB3</accession>
    <name>V7BRB3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G215200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRB3"/>
    <dbReference type="SMR" id="V7BRB3"/>
    <dbReference type="STRING" id="3885.V7BRB3"/>
    <dbReference type="Gramene" id="ESW20509">
        <property type="protein sequence ID" value="ESW20509"/>
        <property type="gene ID" value="PHAVU_006G215200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2171">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANACGCV"/>
    <dbReference type="OrthoDB" id="7862313at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006606">
        <property type="term" value="P:protein import into nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021133">
        <property type="entry name" value="HEAT_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058584">
        <property type="entry name" value="IMB1_TNPO1-like_TPR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040122">
        <property type="entry name" value="Importin_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057672">
        <property type="entry name" value="TPR_IPO4/5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10527">
        <property type="entry name" value="IMPORTIN BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25574">
        <property type="entry name" value="TPR_IMB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25780">
        <property type="entry name" value="TPR_IPO5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00913">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50077">
        <property type="entry name" value="HEAT_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50166">
        <property type="entry name" value="IMPORTIN_B_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="9">
        <location>
            <begin position="23"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="repeat" description="HEAT" evidence="8">
        <location>
            <begin position="379"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="repeat" description="HEAT" evidence="8">
        <location>
            <begin position="420"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW20509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1048" mass="115323" checksum="E2405582D48DE9FB" modified="2014-02-19" version="1">MAQSLELLLIQFLMPDNDARRQAEDQIKRLAKDPQVVPALVQHMRTAKTPNVRQLAAVLLRKKITGHWAKLSPQLKQLVKQSLIDTITMEHSPPVRKASANVVSIVAKYAVPSGEWPDLLPFLFQCSQSGQEDHREVALILFSSLTETIGNAFRPYFADLQALLLKCLQDETSNRVRVAALKAVGSFLEFTHDGDEVIKFREFIPSILNVSRQCIASGEEDVAILAFEIFDELIESPAPLLGDSVKSIVQFSLEVCSSQNLESNTRHQAIQIISWLAKYKSSTLKKHKLIIPILQVLCPLLAESTNENEDDDLAPDRAAAEVIDTMALNIPKHVYQPVFEFASVSCQNANPKFREASVTALGVISEGCLEPMKSKLEPILHIVLGALRDPEQMVRGAASFALGQFAEHLQPEIVSHYESVLPCILNALEDASDEVKEKSYYALAAFCENMGEDILPFLDPLMGRLLTALQNSSRILQETCMSAIGSIASAAEQAFIPYAERVLELMKSFMVLTNDEDLRSRARATELVGIVAMSVGRVGMEPILPPYIEAAISGFGLEYSELREYTHGFFSNVAEILEDSFAQYLPHVVPLAFSSCNLDDGSAVDIDECDDEVANGFGGVSSDDEAHDEPRVRNISIRTGVLDEKAAATQALGLFAQHTKTSYAPYLEETLRILVKHSSYFHEDVRLQAIISLKHALTAAHTIFQSQHEGASKAKELLDTVMSIYIKSMVEDDDKEVVAQACTSVADIIRDYGFATFEPYLAQLVDATSLLLWEQSACQQIESDSEIDDVDSAHDEVLMDAVSDILPAFAKSMGAQFAPILAQLFEPLMKFAKSSRPPQDRTMVVACLAEVAQNMGSPIASYVDRVMPLALKELASSEATNRRNAAFCVGELCKNGHEPALKYYDNILRGLHPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVLPVFMRVLPLKEDREESMAVYSCISTLVLSSNPQILSLVPELVNLFAQVVVSPVETPEVKAVVGRAFSHLISLYGQQMQPLLSNLPPAHANALSSFAQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT82</accession>
    <name>V7BT82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">PGG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G046400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT82"/>
    <dbReference type="STRING" id="3885.V7BT82"/>
    <dbReference type="Gramene" id="ESW21154">
        <property type="protein sequence ID" value="ESW21154"/>
        <property type="gene ID" value="PHAVU_005G046400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIMILCV"/>
    <dbReference type="OrthoDB" id="598775at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026961">
        <property type="entry name" value="PGG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24186:SF46">
        <property type="entry name" value="PROTEIN ACCELERATED CELL DEATH 6-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24186">
        <property type="entry name" value="PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13857">
        <property type="entry name" value="Ank_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13962">
        <property type="entry name" value="PGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="233"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="272"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="302"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="8">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="PGG" evidence="10">
        <location>
            <begin position="186"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW21154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="358" mass="40388" checksum="54F7E3F569B81036" modified="2014-02-19" version="1">MERDEDGFFPLHLASAFGHIEVLKILLENYPNPREIVDNKGRNIVHIAAIMGEFNVVRYVLQDANDEVKDMINDKDYDGNTPLHLAASHSRPKIVQALTWDTRVDLHCLNNNNQTALDAFEQFKQENNPPFPQASIHKILCFTYFCIIRLTWCQLKSVGVQNAKRGSHSIEIPCPRKPEAKKTDFYKNRIDTLMVVSALITTLAFAASFTLPAGNNSSNPRQQGMAVMLNHMLFKPFIFCITTSMYGGISVTIILIWAQLGDTTLALLALKVAVPLLGVTLTTLSVAFLAGVHLVISDLSWLATTIMILCVIFVLLPLLLYTFHWFPLESSNIIMRNISFYPFQFITWLLEKDSTEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTB1</accession>
    <name>V7BTB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G157900g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="3"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTB1"/>
    <dbReference type="SMR" id="V7BTB1"/>
    <dbReference type="Gramene" id="ESW19816">
        <property type="protein sequence ID" value="ESW19816"/>
        <property type="gene ID" value="PHAVU_006G157900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNFRLEY"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000007">
        <property type="entry name" value="Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000222">
        <property type="entry name" value="PP2C_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01032">
        <property type="entry name" value="PPM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 11" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="13">
        <location>
            <begin position="55"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="222"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW19816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="427" mass="46410" checksum="E6DD2E8D0902B775" modified="2014-02-19" version="1">MGCVHGKCCTRYPSPSVGGSRDFRELGPYSAQRKHILTQSSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCFRTQFQGNPSVHFFGVYDGHGEFGTQCSNFVKDRLVENLSSDTALLEDPVKAYTSAFLTTNEDLHKNEIDDSLSGTTAITVLVIGNTLYVANVGDSRAVLAVKDGNRIVAEDLSTDQTPFRRDEYERVKLSGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMVPGAAFTRSVGDMLAETIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSGLGSGEVNVSTVTRTKSKRVKGASELSATTGLDVYRSVRNGFSDLQSCPQHVVSTRSPAIVVPSPACQTSIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUZ9</accession>
    <name>V7BUZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G205500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUZ9"/>
    <dbReference type="SMR" id="V7BUZ9"/>
    <dbReference type="Gramene" id="ESW20396">
        <property type="protein sequence ID" value="ESW20396"/>
        <property type="gene ID" value="PHAVU_006G205500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNDFMLE"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000027">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000055">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058980">
        <property type="entry name" value="Glyco_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1188">
        <property type="entry name" value="FAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26168">
        <property type="entry name" value="Glyco_transf_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycosyltransferase N-terminal" evidence="5">
        <location>
            <begin position="12"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF26168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW20396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="490" mass="54950" checksum="616CE9B304D5FD0F" modified="2014-02-19" version="1">MNCTAETKPHAVLVPFPLQGHINPLFKLAKLLHLRGFHITFVHTDYNHKRYLKSRGPNALQGLPDFRFETIPDGLPPLDDDADGDVSQHIPSLCDSFRKNFLQPFRDLLARLNHSATAGLIPPVTCIVSDCFMSFPIQAAEELAVPIILLSPVSAGAFLCFMHFRTLVDTGTVPLKDESYLTNGYLDTTLVECIPGLQNFRMRDLPSFVKTADPNDFMLEYFIEVAGRVPTVSAIVFNTFDELERDAMNALSSMLPSLYTIGPFPSFLDQSPSNHLASLGSNLWNEDPKCLEWLESQEPRSVVYVNFGSITVMSAEQLLEFAWGLANSKKPFVWIIRPDLVIGGSVILSSEFVNETRDRSLIAGWCPQEQVLNHSSIGGFLTHCGWNSITESVCAGIPMLCWPFFADQQTNCRYVCNEWEIGIEIDNNVKREEVEKLVNELMVGEKGKKMREKTTELKKKAEEFTRPGGHSYINLDTVIKEVLLKQTSLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWQ6</accession>
    <name>V7BWQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Myb/SANT-like DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G148400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWQ6"/>
    <dbReference type="SMR" id="V7BWQ6"/>
    <dbReference type="STRING" id="3885.V7BWQ6"/>
    <dbReference type="Gramene" id="ESW22374">
        <property type="protein sequence ID" value="ESW22374"/>
        <property type="gene ID" value="PHAVU_005G148400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVU9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTQLGHP"/>
    <dbReference type="OrthoDB" id="784295at2759"/>
    <dbReference type="PhylomeDB" id="V7BWQ6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46327">
        <property type="entry name" value="F16F4.11 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46327:SF9">
        <property type="entry name" value="MYB_SANT-LIKE DNA-BINDING DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb/SANT-like DNA-binding" evidence="3">
        <location>
            <begin position="114"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="75"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="260"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="426"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="354"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="83"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="271"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="437"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="448" mass="50794" checksum="47BE36222C2B2482" modified="2014-02-19" version="1">MNGSGLGGGFLSGPSGGILDLESSFHRHQQTQLGHPSITGQQQLNIMSGLESDHPIGLIEVKNLNAALNFGKGKAIAPSDSNELSDEDEPSYAEEGNCENLDGGKGKKGSPWQRMKWTDNVVRLLITVVSCVGDDGTIAGMDGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPALMDSIPNLSAKMKDDVRKILSSKHLFYKEMCAYHNGQRIPNCHELDLQGYSMEHGRDSTRDNNGSEDEDENNNDSEEDELDDDININAHEDGGRMQELCDRNILSEEDGHFGPQASRMDKFEIEMARVFQDPTKSLREQREWIKIQMLQLQEQNISYQAQTLELEKQRLKWLRYCSKKDRELERLRLENKRMKLENEHRILKLKQKELEVDFSTSEMSLDPASIGINRPQGREHVSLGRQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXE0</accession>
    <name>V7BXE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutathione S-transferase</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G053200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Is involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>RX + glutathione = an S-substituted glutathione + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:17792"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="EC" id="2.5.1.18"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
            <location evidence="3">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GST superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXE0"/>
    <dbReference type="SMR" id="V7BXE0"/>
    <dbReference type="STRING" id="3885.V7BXE0"/>
    <dbReference type="Gramene" id="ESW21231">
        <property type="protein sequence ID" value="ESW21231"/>
        <property type="gene ID" value="PHAVU_005G053200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0406">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCCFFGK"/>
    <dbReference type="OrthoDB" id="202840at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03185">
        <property type="entry name" value="GST_C_Tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03058">
        <property type="entry name" value="GST_N_Tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000014">
        <property type="entry name" value="Tau class glutathione S-transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045074">
        <property type="entry name" value="GST_C_Tau"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045073">
        <property type="entry name" value="Omega/Tau-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11260:SF781">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE U19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11260">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13410">
        <property type="entry name" value="GST_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01152">
        <property type="entry name" value="Main.3:_Omega-_and_Tau-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00358">
        <property type="entry name" value="Main_(cytGST)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="GST C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="4">
        <location>
            <begin position="3"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="5">
        <location>
            <begin position="88"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00047960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU369102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="25512" checksum="C62D626AA58ED6A2" modified="2014-02-19" version="1">MGDEVILLNFWLSPYGIRVRIALEEKGIKYENREEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVEYIDEVWKDQSPLLPSNPYQRAQARFWANYVDTELYKHALRFWTTEGEEREGARKEFLECLKLFEEQLGDEPYFGGNNFGIVDVALVPLFCYFYTFSLYDNFISEAQYPKIISWAKRCTQKESVSKSFPSEELVKEYLSQKRQHKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYU7</accession>
    <name>V7BYU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Gibberellin-regulated protein 14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G019900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GASA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYU7"/>
    <dbReference type="SMR" id="V7BYU7"/>
    <dbReference type="Gramene" id="ESW23119">
        <property type="protein sequence ID" value="ESW23119"/>
        <property type="gene ID" value="PHAVU_004G019900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYFP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RACTTCC"/>
    <dbReference type="OrthoDB" id="1850441at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003854">
        <property type="entry name" value="GASA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201">
        <property type="entry name" value="EXTENSIN, PROLINE-RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201:SF53">
        <property type="entry name" value="GIBBERELLIN-REGULATED PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02704">
        <property type="entry name" value="GASA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755178" description="Gibberellin-regulated protein 14" evidence="3">
        <location>
            <begin position="22"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="41"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="179" mass="19159" checksum="78EC818B9E6D5467" modified="2014-02-19" version="1">MASNSILLLAIFLLVTSKVFSHEEDLEIMANNVNPQVPAPVSAPPVKAPTPTPPVKSPSYPPGPVTTPSPTTPPVKVPPPQSPTVKPPAPSPPQVKPPTPTPPVVYPPPLSPVVKSTKDCIPLCDGRCQLHSRKKLCLRACTTCCYRCKCVPPGTYGNREMCGKCYTDMLTHGNKYKCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZQ3</accession>
    <name>V7BZQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GDSL esterase/lipase APG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G164800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZQ3"/>
    <dbReference type="SMR" id="V7BZQ3"/>
    <dbReference type="STRING" id="3885.V7BZQ3"/>
    <dbReference type="Gramene" id="ESW22578">
        <property type="protein sequence ID" value="ESW22578"/>
        <property type="gene ID" value="PHAVU_005G164800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRICANA"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1110:FF:000003">
        <property type="entry name" value="GDSL esterase/lipase APG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050592">
        <property type="entry name" value="GDSL_lipolytic_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45642">
        <property type="entry name" value="GDSL ESTERASE/LIPASE EXL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45642:SF45">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754866" description="GDSL esterase/lipase APG" evidence="2">
        <location>
            <begin position="24"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="353" mass="38137" checksum="6BEBF8C36E17D4C9" modified="2014-02-19" version="1">MNMNSRKGLLVLFAFVFLAWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYQCKLAKVAGSKKASLIIKDALYILSAGSSDFVQNYYVNPLINKAFTPDQYSAYLVGAFSIFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHENGCVSRINNDAQGFNKKIKSAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKYGFAEARKGCCGTGIVETTSLMCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZR5</accession>
    <name>V7BZR5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G161900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZR5"/>
    <dbReference type="SMR" id="V7BZR5"/>
    <dbReference type="STRING" id="3885.V7BZR5"/>
    <dbReference type="Gramene" id="ESW22545">
        <property type="protein sequence ID" value="ESW22545"/>
        <property type="gene ID" value="PHAVU_005G161900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR69">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MVERPKR"/>
    <dbReference type="OrthoDB" id="2017571at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914:SF12">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914">
        <property type="entry name" value="TRANSCRIPTION FACTOR HEC3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="324"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="250"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="266"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="47187" checksum="5941BDADA3C20E94" modified="2014-02-19" version="1">MDGLSWDSSSQLVGNIPSLWSSHPQDLEGEYHHSLPHLFSSVLNQTGYPYPCSEKEREMVHPSTSEIMSILSQRTATMPVKSGAAGASWGEALTSQSCPSLSANMNQTSNYQTDFNTSHQQEHLINGIQNGKATCSLESLDCLLSDTKNGNTDTSIEDDGISMMVLSDCTNLCNFNYGSAVSSGESESNASNARNSDMQYPSVNELDETVSQSFSDQYISQARVIDSEVICTKGSNSCFSIAHNSFRLVSETSPKSKRPRWDKHPGSSNINFQQPNSSVSPSFEEPDPEAVAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVKISTDPQTVAARERRERISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRAQVKALENIGNKLQTVNSPPNIAFSFNPSFPIQTHFPLQNPSGHTHIQHSKGWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZX6</accession>
    <name>V7BZX6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G169700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZX6"/>
    <dbReference type="STRING" id="3885.V7BZX6"/>
    <dbReference type="Gramene" id="ESW22638">
        <property type="protein sequence ID" value="ESW22638"/>
        <property type="gene ID" value="PHAVU_005G169700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ97">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWWPCLI"/>
    <dbReference type="OrthoDB" id="1900908at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36362">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36362:SF1">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="464" mass="52552" checksum="68A7594370CF327D" modified="2014-02-19" version="1">MSSPRPASQAQSPTPTHRHPNLSAPSMLERTLSSRRVSPYAEGDAEAGGGADESKTKKHQHILFRLTTRASNYLARIAGSGSFYLPCIVVSLFLFFSLSFLFTSRGFVCISSSYSPVSRTSFFDFDGLDSDFGALGVPCCRSKHGKTVEWTSKDLLKGLEEFVPVYETRPIKNNMYGMGFDHSFGLWFIAHWLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDGNCTYYAGKDFVDFGSVDWPKVMKNHGILDLSRVLIFFDDHQNELKRIEQALKAGFHHLVFEDNYDTGTGDHYSLRQICDQSYIRGGGHSCFEDSDEARIRSKRKKLWEKAVDIEELCGPGEAWWGVRGHMRDNFNHSNKPLSYAQHFQNSRYVESILDVYWELPPVAGPSLTHQTRYDPARAPTPIVEDGRYGLFQRLGLANLDKSVFNGYTQMVYLQISEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C061</accession>
    <name>V7C061_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gag1-like clamp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G177600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C061"/>
    <dbReference type="STRING" id="3885.V7C061"/>
    <dbReference type="Gramene" id="ESW22743">
        <property type="protein sequence ID" value="ESW22743"/>
        <property type="gene ID" value="PHAVU_005G177600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYW2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="STCEMDS"/>
    <dbReference type="OrthoDB" id="1896025at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025124">
        <property type="entry name" value="Gag1-like_clamp"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33373:SF1">
        <property type="entry name" value="DUF4050 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33373">
        <property type="entry name" value="OS07G0479600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13259">
        <property type="entry name" value="clamp_Gag1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gag1-like clamp" evidence="2">
        <location>
            <begin position="90"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="17"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="200" mass="22367" checksum="A1E566FDC5B491B6" modified="2014-02-19" version="1">MCSKYLYIILKKPCFSGKGEEEETQQNPKKQLPYRTKPHHSRTATKHSGCLGPFKKPPLIANVDVPPKGLKKRGKAAKIPSTSEDFWITSTHDMDNSAVQSQGSISSASITNQAADPHGGSCNPTEFVNHGLTLWNQNRQAWIGSKRSENRTEKSRESKVSWNATYESLLGGNKPFPQHIPLAEMVDFLVDIWEQEGLYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C092</accession>
    <name>V7C092_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MADS-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G060900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C092"/>
    <dbReference type="SMR" id="V7C092"/>
    <dbReference type="Gramene" id="ESW23597">
        <property type="protein sequence ID" value="ESW23597"/>
        <property type="gene ID" value="PHAVU_004G060900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNMAREN"/>
    <dbReference type="OrthoDB" id="601557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1810.10">
        <property type="entry name" value="Transcription factor, MADS-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002100">
        <property type="entry name" value="TF_MADSbox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036879">
        <property type="entry name" value="TF_MADSbox_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945">
        <property type="entry name" value="MADS BOX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945:SF564">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00319">
        <property type="entry name" value="SRF-TF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00404">
        <property type="entry name" value="MADSDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00432">
        <property type="entry name" value="MADS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55455">
        <property type="entry name" value="SRF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50066">
        <property type="entry name" value="MADS_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="MADS-box" evidence="6">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW23597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="247" mass="28223" checksum="2E6D240AB4B59717" modified="2014-02-19" version="1">MGRARITLKHISNEKFRKTTFLRRKRGLMKKISEFSNKCGGEHCLIVFDDDNGDVGPVTSPQNPVQVHSMIQKYYSQIKNERPHKTYGIEEFLENRKNMIETEISRVDKHISSIKYPTLDPSIIIMEEDQLRAFCAHVDAKIEACDRGIKLLKDQSQGFVPNMARENATASTSHPNQVNYLQSISQSEALLDDFFKQLNDKNYGMVDFSSSVDVPLNSTNELSDLEFEELMMGLSSVDWPYQAFCGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0X9</accession>
    <name>V7C0X9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G078600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0X9"/>
    <dbReference type="Gramene" id="ESW23822">
        <property type="protein sequence ID" value="ESW23822"/>
        <property type="gene ID" value="PHAVU_004G078600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="95" mass="10630" checksum="09AA8B77ADEA67B1" modified="2014-02-19" version="1">MLIESSLISPTFHYHCHKSFATPRLPLPATVAPLSPPRPSHQRRSTLFARAAHFAAPSVVALPTSKHPPRPHRQRRNTLRIVTSFGLFGFMLLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2I4</accession>
    <name>V7C2I4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HIT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G053100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2I4"/>
    <dbReference type="SMR" id="V7C2I4"/>
    <dbReference type="STRING" id="3885.V7C2I4"/>
    <dbReference type="Gramene" id="ESW23505">
        <property type="protein sequence ID" value="ESW23505"/>
        <property type="gene ID" value="PHAVU_004G053100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3275">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YRVVMNC"/>
    <dbReference type="OrthoDB" id="672793at2759"/>
    <dbReference type="PhylomeDB" id="V7C2I4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047627">
        <property type="term" value="F:adenylylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01276">
        <property type="entry name" value="PKCI_related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.428.10:FF:000005">
        <property type="entry name" value="Histidine triad nucleotide-binding protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019808">
        <property type="entry name" value="Histidine_triad_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="HISTIDINE TRIAD HIT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="HIT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00892">
        <property type="entry name" value="HIT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="4">
        <location>
            <begin position="45"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="2 3">
        <location>
            <begin position="139"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-AMP-histidine intermediate" evidence="1">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR601310-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR601310-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW23505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="155" mass="16897" checksum="495C33C71D4617FF" modified="2014-02-19" version="1">MSAKNNNIRDRISVLASHLTSSSAMASEKEAALAAIPSDADAPTIFDKIINKEIPSTVVYEDDKVLAFRDITPQAPTHILIIPKVKDGLSGLSKAEERHFDILGRLLYTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMNWPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3E1</accession>
    <name>V7C3E1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription termination factor MTERF5, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G147000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the mTERF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3E1"/>
    <dbReference type="SMR" id="V7C3E1"/>
    <dbReference type="STRING" id="3885.V7C3E1"/>
    <dbReference type="Gramene" id="ESW24639">
        <property type="protein sequence ID" value="ESW24639"/>
        <property type="gene ID" value="PHAVU_004G147000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="637682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.70.10:FF:000008">
        <property type="entry name" value="Transcription termination factor MTERF5 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.70.10">
        <property type="entry name" value="Transcription termination factor 3, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003690">
        <property type="entry name" value="MTERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038538">
        <property type="entry name" value="MTERF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068">
        <property type="entry name" value="CGI-12 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068:SF9">
        <property type="entry name" value="TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02536">
        <property type="entry name" value="mTERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00733">
        <property type="entry name" value="Mterf"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW24639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="471" mass="53452" checksum="54D59C2FEE6B2E8B" modified="2014-02-19" version="1">MKTFSLIQLPHHFLCARFFSYTTTRTQLSFPAKVFICQAKSGIDGSLNLKVVSPTLLVAEKEEAKAVLTLFLKKQGSSNAVAARTINKSDLFIDHLVSKLHSKHKSWYLAGRELTTLEIRDALIPYLESLFEEHGDTLVDVVENYPNPPVKDKSEVLVSPSSPVLDSKKLKAVSLVSETDPDGGNLRPHIVYLIELGMDIEQIRSITHRFPAFAYYSLEGKIKPVVEFFLELGVPREHIPTILSKRPQLCGISLSENLKPTMKFLESLGVDEKQWPKLIYRFPALLTYSRQKVMESIDFLHELGLSEENIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGADVGILLFRCPQNFGLSIEANLKPITAFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYSLEKRIKPRFSIMEKSGVRLLLNQVLSLSSSNFDKALKKKMKKMQDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3V9</accession>
    <name>V7C3V9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G098900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3V9"/>
    <dbReference type="Gramene" id="ESW24058">
        <property type="protein sequence ID" value="ESW24058"/>
        <property type="gene ID" value="PHAVU_004G098900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SBZI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1935957at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010227">
        <property type="term" value="P:floral organ abscission"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039639">
        <property type="entry name" value="IDA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33599">
        <property type="entry name" value="PROTEIN IDA-LIKE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33599:SF9">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW24058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15644" checksum="CEFC7A518E02EF7B" modified="2014-02-19" version="1">MHSQFFNVHLLSIFAPFKILYFLFTFFSFSCLTTPPPSLSFSFPLPLFFFYSLFPWFGEMGRRHLHAWLMLLLLMAHSVGTSNGSRHTQVFNMQPKSQGLSQNFFGFLPKAMPLPPSGPSRQHNSIQLQNSRGKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4V4</accession>
    <name>V7C4V4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein kinase superfamily protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G089800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4V4"/>
    <dbReference type="STRING" id="3885.V7C4V4"/>
    <dbReference type="Gramene" id="ESW23951">
        <property type="protein sequence ID" value="ESW23951"/>
        <property type="gene ID" value="PHAVU_004G089800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0582">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1714763at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043539">
        <property type="term" value="F:protein serine/threonine kinase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047173">
        <property type="entry name" value="STRAD_A/B-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48014">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE FRAY2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48014:SF21">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE FRAY2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="31"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="200"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="240" mass="26679" checksum="C480F9DB2656F24C" modified="2014-02-19" version="1">MSAFTAEDFWIENGNQVLDKKNNREVRRPPNFSGPLMLPPRASANSLSAPIKSSGGFRDSLDDKSKANQVQIKGRFSVTSENLDLVKGSSLRKSASVSYWMLDSKQMPISQGTKDSATNNISASLLLTHLQNLLQQTSMQQDLIMNLLNSLQSAEGIEVSQNGKLPPIPRSSEINGSVDTAAAERERLLLLKIIELHTRMTTLTDELTAEKLKYMQLQQQLTALQTKEQNRDKLINPDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C620</accession>
    <name>V7C620_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cell wall hydroxyproline-rich glycoprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G161500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C620"/>
    <dbReference type="SMR" id="V7C620"/>
    <dbReference type="STRING" id="3885.V7C620"/>
    <dbReference type="Gramene" id="ESW24803">
        <property type="protein sequence ID" value="ESW24803"/>
        <property type="gene ID" value="PHAVU_004G161500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ2D">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEEHSPP"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000224">
        <property type="entry name" value="Leucine-rich repeat extensin-like protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000631">
        <property type="entry name" value="Leucine-rich repeat extensin-like protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051582">
        <property type="entry name" value="LRR_extensin-like_regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32093">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32093:SF120">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0134">Cell wall</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0379">Hydroxylation</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 12" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755790" description="Cell wall hydroxyproline-rich glycoprotein" evidence="12">
        <location>
            <begin position="25"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="450"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="633"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="11">
        <location>
            <begin position="633"/>
            <end position="710"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00041871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00054567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW24803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="725" mass="78102" checksum="6FAE851647472A6D" modified="2014-02-19" version="1">MRKKTYSFHFSLSLSLSLFFVVLANSLCSSAAISHNGPLTDAEASYIKQRQLLYYKDEFGDRGEKVTVDPSFRFENNRLRNAYIALQAWKHAILSDPKNLTLDWVGPNVCNYTSVFCAPALDNPKINTVAGIDLNHGDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDKLKLLFELDLSNNRFAGKFPDVVLRLPQLKFLDLRFNEFEGTVPKELFDKELDAIFINDNRFVFDLPENFGNSPVSVIVLANNRFHGCVPAGIGNMKGLNEIILMNNAFRSCFPEEIGLLTNLTVFDVSFNQLLGPLPEAIGGAVGLEQLNVAHNLLSGKIPESICKLPNLQNFTFSYNFFTGEPPRCRALPAADDRRNCLPARPYQRSAGQCKSFLSHPVDCKSFRCKSFVPTLPPPPPPSPPLPSPPPPSPVYVPRTPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPSPPPPAPVYCVKSPPPPSPPPPSPPPPPSPVFSPPPPVQYYYSPPPPPQHSPPPPPPHSPPPPPPSPSPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYLPPPSPSPPPPPVQYNSPPPPTPVYEYNSPPPPPPSSPPPAPVYEGPLPPVIGVSYASPPPPPFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6X0</accession>
    <name>V7C6X0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Cytochrome P450 77A3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G076900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6X0"/>
    <dbReference type="STRING" id="3885.V7C6X0"/>
    <dbReference type="Gramene" id="ESW25922">
        <property type="protein sequence ID" value="ESW25922"/>
        <property type="gene ID" value="PHAVU_003G076900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTLGTLH"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="PhylomeDB" id="V7C6X0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11075">
        <property type="entry name" value="CYP77_89"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000012">
        <property type="entry name" value="Cytochrome P450 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944:SF19">
        <property type="entry name" value="CYTOCHROME P450 77A4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944">
        <property type="entry name" value="CYTOCHROME P450 98A9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755321" description="Cytochrome P450 77A3" evidence="10">
        <location>
            <begin position="30"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="454"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW25922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="510" mass="57888" checksum="9FF7FDB90FAB1025" modified="2014-02-19" version="1">MLPTMHLNDLLLLAFAFLFLCWWWRRCTTTGGGPKNLPPGPPGWPIVGNLFQVILQRRHFIYVIRDLRKKYGPIFTMQMGQRTLIIVTSADLIHEALIQRGPLFASRPQDSPIRLIFSMGKCAINSAEYGPLWRTLRKNLVTEMITPLRIKQCGWIRKWAMEAHMSRIQKEAREQGFVEVMSNCRLTICSILICLCFGAKIEERRIKSIESILKDVMLITLPKLPDFLPVFTPLFRRQVKEARELRKRQVELLAPLIRSRKAYVEGSFSGSEMASPVGAAYVDSLFELEVPGRGRLGEEELVTLVSEIISAGTDTSATAVEWALFHLVTDQEIQERLYKEIVECVGKEGVVKESDVERMPYLSAVVKETFRRHPPSHFVLSHAATEDTKLGGYTVPKNASVEFYTAWLSEDPNMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWTLGILHINLLLAKMVQAFHWLPNPNSPPDPAETFAFTVVMKNPLKAVIVPRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7A2</accession>
    <name>V7C7A2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G019000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7A2"/>
    <dbReference type="Gramene" id="ESW25238">
        <property type="protein sequence ID" value="ESW25238"/>
        <property type="gene ID" value="PHAVU_003G019000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436649at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755047" evidence="1">
        <location>
            <begin position="25"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="7714" checksum="51681C0C0724BA2D" modified="2014-02-19" version="1">MSKKNLVLAVVFVILAMEVCVGNSFSMEENTEGSDIVVVACQTKQDCLKNIRALPCGASVVKCSDGYCVCNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7S3</accession>
    <name>V7C7S3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ascorbate ferrireductase (transmembrane)</fullName>
            <ecNumber evidence="11">7.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G025900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>Fe(3+)(out) + L-ascorbate(in) = monodehydro-L-ascorbate radical(in) + Fe(2+)(out) + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30403"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
            <dbReference type="ChEBI" id="CHEBI:59513"/>
            <dbReference type="EC" id="7.2.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="7.2.1.3" evidence="11"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7S3"/>
    <dbReference type="SMR" id="V7C7S3"/>
    <dbReference type="STRING" id="3885.V7C7S3"/>
    <dbReference type="Gramene" id="ESW25320">
        <property type="protein sequence ID" value="ESW25320"/>
        <property type="gene ID" value="PHAVU_003G025900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TPNGIDM"/>
    <dbReference type="OrthoDB" id="907479at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140571">
        <property type="term" value="F:transmembrane ascorbate ferrireductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd08766">
        <property type="entry name" value="Cyt_b561_ACYB-1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1770:FF:000001">
        <property type="entry name" value="Cytochrome b reductase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043205">
        <property type="entry name" value="CYB561/CYBRD1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006593">
        <property type="entry name" value="Cyt_b561/ferric_Rdtase_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10106">
        <property type="entry name" value="CYTOCHROME B561-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10106:SF41">
        <property type="entry name" value="TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03188">
        <property type="entry name" value="Cytochrom_B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00665">
        <property type="entry name" value="B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50939">
        <property type="entry name" value="CYTOCHROME_B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome b561" evidence="14">
        <location>
            <begin position="13"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00051575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="240" mass="26617" checksum="EFA0820FD71ABBDE" modified="2014-02-19" version="1">MGSVYSPSVLLLFARVAGLAVAVLVLIWALAFKSSFLTPSLSQQDLLYAVLHPLLMVIGFILLTGEAILVHRWLPGSRGLKKLVHLWLQGVALACGIFGIWTRFQGKDGIVANFYSLHSWMGLVCVSLFAAQWLIGFLSFWHRGELRRVRIRILPWHVFLGLYTYALAIATAETGLLEKITFLQTMRNVAKHSTESMVVNTLGLALALLSAFVILAAVSPKYQTLQTKLLYSDNTRTLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C898</accession>
    <name>V7C898_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G112400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C898"/>
    <dbReference type="STRING" id="3885.V7C898"/>
    <dbReference type="Gramene" id="ESW26354">
        <property type="protein sequence ID" value="ESW26354"/>
        <property type="gene ID" value="PHAVU_003G112400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2175">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FYKFCID"/>
    <dbReference type="OrthoDB" id="27483at2759"/>
    <dbReference type="PhylomeDB" id="V7C898"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005654">
        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030289">
        <property type="term" value="C:protein phosphatase 4 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072542">
        <property type="term" value="F:protein phosphatase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055236">
        <property type="entry name" value="EVH1_PP4R3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006887">
        <property type="entry name" value="P4R3-like_central_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051137">
        <property type="entry name" value="PP4R3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23318">
        <property type="entry name" value="ATP SYNTHASE GAMMA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23318:SF0">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22972">
        <property type="entry name" value="EVH1_PP4R3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04802">
        <property type="entry name" value="PP4R3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PP4R3 EVH1-like" evidence="5">
        <location>
            <begin position="15"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="Serine/threonine-protein phosphatase 4 regulatory subunit 3-like central" evidence="4">
        <location>
            <begin position="156"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="471"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="662"/>
            <end position="772"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="786"/>
            <end position="881"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="682"/>
            <end position="707"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="712"/>
            <end position="721"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="722"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="750"/>
            <end position="760"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="789"/>
            <end position="800"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="809"/>
            <end position="818"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="819"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="833"/>
            <end position="855"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF22972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="881" mass="100473" checksum="C4B9517FEAB1801E" modified="2014-02-19" version="1">MGAPEKSQANTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNSEPFHSVNSEPRELPAVELSTLPLILKTVVDTGFADQLRLTELILSDQEFFQKLMEVFRMCEDLENIDGLHMIFKIVKGIVLLNSPAIFERIFSDDFIVDIIGALEYDPELPRVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARLLDEGIGANLNSIIHSNNAYVVSSLKDDSTFIQELFARLKSGTTTQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTDVLQSQDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFEENMHCQFLEILRNLLDSCTLSGSQRDTIIDIFFERHLGQLIEVITASCPSENTADESDKSVGPGRSAHRQDGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVFEKILLLTRRAERYLVVGAVRFVRTILSRHEEQLINYVIRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIRKENLKVLLKYIVDCFWDQLVKFEYLASIHSLKVKYEQCLDNGGTKDVVTVVDLRRRNDERALEREEERYFNEDSDEEDIASASVPRNQKGHQQPNLSNGVASSYSQLSPRSLVDYEDDEDDEDYKPPPRKQPETSEDDDGVLESLRLKRKLPSKDKEPELVKKQKLSKNSKSKDSVFAALCSTLSQAALPSKKTSISIQTSSRTVEGRMGSSENNQGDVQSISRSSSDNSDIAGEENHIETEAEDSRSFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7C983</accession>
    <name>V7C983_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_003G143400g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C983"/>
    <dbReference type="STRING" id="3885.V7C983"/>
    <dbReference type="Gramene" id="ESW26732">
        <property type="protein sequence ID" value="ESW26732"/>
        <property type="gene ID" value="PHAVU_003G143400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUMM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCNRVSK"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7C983"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000008">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF48">
        <property type="entry name" value="PEROXIDASE 16-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 18" id="KW-0349">Heme</keyword>
    <keyword evidence="12 18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="8 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 18" id="KW-0964">Secreted</keyword>
    <keyword evidence="18" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149063" description="Peroxidase" evidence="18">
        <location>
            <begin position="24"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="19">
        <location>
            <begin position="24"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="34"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="67"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="120"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="199"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW26732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="35960" checksum="7F8BDC54F0F1EDE5" modified="2014-02-19" version="1">METPNFVFFSLLLLLTSTTLSSAQLTRSFYKNVCPNVEQLVRSAVAQKFQQTFVTAPATLRLFFHDCFVRGCDGSIMLANSNSEKDHPDDISLAGDGFDTVIKAKAAVDKDPKCRNKVSCADILALATRDVVNLAGGPSYDVELGRRDGRISTIASVQRHLPHPEFNLDQLNSMFNVNGLSQIDMIALSGAHTIGFSHCNRFSKRIYNFSPRGRIDPTLNLQYAFQLRQMCPLKVDPRIAIDMDPVSPQKFDNQYFKNLQQGKGLFTSDQVLFTDARSKATVNLFASNEGAFQKAFVDAITKLGRVGVKTGNQGEIRFDCTRPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9A0</accession>
    <name>V7C9A0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G070400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9A0"/>
    <dbReference type="SMR" id="V7C9A0"/>
    <dbReference type="Gramene" id="ESW25850">
        <property type="protein sequence ID" value="ESW25850"/>
        <property type="gene ID" value="PHAVU_003G070400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1237">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAQRYRY"/>
    <dbReference type="OrthoDB" id="8904098at2759"/>
    <dbReference type="PhylomeDB" id="V7C9A0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17416">
        <property type="entry name" value="MFS_NPF1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000109">
        <property type="entry name" value="POT_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11654">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00854">
        <property type="entry name" value="PTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="208"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="352"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="394"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="435"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="475"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="560"/>
            <end position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="591" mass="65489" checksum="7C7BFCB4BA9DC0EE" modified="2014-02-19" version="1">MDRLRSLFSFSSQKRDSMPSLQHKLLDEESIAQSEPNTHFKKPGWKAMPYVLGNDTIERLATSGMQANFVVYLMKVYNMDQVLSANILNTWLAVSNITPLIGAFFADAYFGKFRTIALASFASLAGMIIVMLTSWVPQFHPAPCSIEQLRGGVCSGISNFQMGVLVFGLFWLSIGSGGIRPCSVPFAVEQFDLTTAEGRNESNRFYSLYFATQTLVMLTNQTLLVYIQDSVSWTLGFALPTVYMIVSICFFFAGSKVYAYVQPAGSNFSSIAQVVVAAQRKRHSHLPAAEDTQGAFYDPPLQHDSERKMLLTKEFGHLNKAALVLENELEDDGSNKNPWRLSSIQRVEELKCLFKIMPIFVTSIIVNIPLGQQAIFGVSQAMKMDRHLGHNFEIHPGSVNVIMLVAIGIVLPFYDRIVVPALEKVTKQEGGLTTLQRIGFGHAFGFLSMVVSGLVEIKRRELAISSGASDGVAPISVLWLAPQFILLGCCHVFATVGHIEFFNNESPEGLRSVANSLLCLNLSAASNVSSFIVNIVHSFTGKQGQPDWLDGDINKGRLEYFYFVIGAFCLLNMLCFILSSRSYHYKAFVKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9D9</accession>
    <name>V7C9D9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">ADP-ribosylation factor 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G148800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the small GTPase superfamily. Arf family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9D9"/>
    <dbReference type="SMR" id="V7C9D9"/>
    <dbReference type="STRING" id="3885.V7C9D9"/>
    <dbReference type="Gramene" id="ESW26792">
        <property type="protein sequence ID" value="ESW26792"/>
        <property type="gene ID" value="PHAVU_003G148800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0070">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LEXLVET"/>
    <dbReference type="OrthoDB" id="2011769at2759"/>
    <dbReference type="PhylomeDB" id="V7C9D9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04151">
        <property type="entry name" value="Arl1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000510">
        <property type="entry name" value="ADP-ribosylation factor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024156">
        <property type="entry name" value="Small_GTPase_ARF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006689">
        <property type="entry name" value="Small_GTPase_ARF/SAR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11711">
        <property type="entry name" value="ADP RIBOSYLATION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00025">
        <property type="entry name" value="Arf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00328">
        <property type="entry name" value="SAR1GTPBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00178">
        <property type="entry name" value="SAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51417">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 12 14" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0519">Myristate</keyword>
    <keyword evidence="5 12 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="24"/>
            <end position="31"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00053326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR606689-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW26792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="182" mass="20273" checksum="22A61DF09D67D793" modified="2014-02-19" version="1">MGLVFTKLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDVDRLVIAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKTSAIKGEGLFEGLDWLSNTLKSGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA12</accession>
    <name>V7CA12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BSD2 cysteine rich domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G164500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA12"/>
    <dbReference type="SMR" id="V7CA12"/>
    <dbReference type="STRING" id="3885.V7CA12"/>
    <dbReference type="Gramene" id="ESW26994">
        <property type="protein sequence ID" value="ESW26994"/>
        <property type="gene ID" value="PHAVU_003G164500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S25V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GVNSEDH"/>
    <dbReference type="OrthoDB" id="2019540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101031">
        <property type="term" value="C:protein folding chaperone complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044183">
        <property type="term" value="F:protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057453">
        <property type="entry name" value="BSD2_CRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15852">
        <property type="entry name" value="PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15852:SF51">
        <property type="entry name" value="PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25436">
        <property type="entry name" value="BSD2_CRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BSD2 cysteine rich" evidence="1">
        <location>
            <begin position="64"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="132" mass="13962" checksum="BB9B5F7F131E2184" modified="2014-02-19" version="1">MSHSLCFAPICSLESPKKPGTVIGNSVTRKAFGMKEACQSSKVPSFQSLKVKATEDKSQKTKTRSIVCSDCEGNGAIMCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKKDILCGSCNGAGFLGGFMSTFDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAB7</accession>
    <name>V7CAB7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G071500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAB7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="26" mass="2943" checksum="FCCCAA7D8B18D779" modified="2014-02-19" version="1" fragment="single">MVVKLASQLVDSSEFTCRLCLTELTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBR0</accession>
    <name>V7CBR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FPL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G140400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBR0"/>
    <dbReference type="SMR" id="V7CBR0"/>
    <dbReference type="STRING" id="3885.V7CBR0"/>
    <dbReference type="Gramene" id="ESW26695">
        <property type="protein sequence ID" value="ESW26695"/>
        <property type="gene ID" value="PHAVU_003G140400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2219">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PLVHRHQ"/>
    <dbReference type="OrthoDB" id="294052at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005770">
        <property type="term" value="C:late endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016197">
        <property type="term" value="P:endosomal transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901096">
        <property type="term" value="P:regulation of autophagosome maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007034">
        <property type="term" value="P:vacuolar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039272">
        <property type="entry name" value="CLEC16A/TT9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019155">
        <property type="entry name" value="CLEC16A/TT9_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21481">
        <property type="entry name" value="PROTEIN CLEC16A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21481:SF4">
        <property type="entry name" value="PROTEIN TRANSPARENT TESTA 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09758">
        <property type="entry name" value="FPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FPL" evidence="1">
        <location>
            <begin position="42"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="814" mass="91633" checksum="446BAF64136C64C7" modified="2014-02-19" version="1">MWNSFWRSRDRFSLDQLRYLTEQLTKVQIINEVNKGFVIEALRSIAELITYGDQHDPSFFEFFMEKQVMGEFLRVLKLTRTVSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEYINYLITYPFDFRNEELLSYYISFLRTISGKLNKNTVSLLVKTHGDEVVSFPLYVEAIRYAFHEESMIRTAVRAVTLNVYHVGDDSVNRYIASTPHKDYFSNLVSFFRKQSMDLNKLLSDTQLNPGPDSMSAIIAAVDEIEDNLYYFSDVVSAGIPDVGRLITDGIMMILIFPLLLPSLRVMPNNDMQDGASLSLYLLCCILRIVKIKDLANTVAAALFYPSEAFTKSSRGFHSDGVLVQNDCTSSNLSLREVLLAYVSKGNDILVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEELFSSKSSRDGIGNDINVYHKKIKEQYGVSFLPLDAGISPHIHRFQVIDALVSLSCRSNISAEILWDGGWLLRQLLPYSVSEFNSHHLELLKVSYKNYASALVEEARGSWSDLLISVLCDEWRKCKRAMESSSPRKEPNCILLLPWKISSGGHVPEESSFAAGKRMHELVKVFVLLHQLQIFTLGRALSEQPLIYPPGDLHANFRARGSGLDVSGPKAGTEVSLGNALPCRIAFERGKELHVYFLAISLGISGWLALAEELPLKKSHGVVRSVAPLAGCNPRIDDNHATWLHLRIRASSLPFVDPAQIKDYGKKKTKASVDGRWTLAFRDEETCKSAFLMIVEENNFLSNEVHRRLKPLFNLETAIDLSGSSLCFPEDSSSYRTHPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE85</accession>
    <name>V7CE85_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">asparagine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G220700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Asn) + L-asparagine + ATP = L-asparaginyl-tRNA(Asn) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11180"/>
            <dbReference type="Rhea" id="RHEA-COMP:9659"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58048"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.22" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE85"/>
    <dbReference type="SMR" id="V7CE85"/>
    <dbReference type="STRING" id="3885.V7CE85"/>
    <dbReference type="Gramene" id="ESW27653">
        <property type="protein sequence ID" value="ESW27653"/>
        <property type="gene ID" value="PHAVU_003G220700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0554">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEMAFYD"/>
    <dbReference type="OrthoDB" id="1931232at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004816">
        <property type="term" value="F:asparagine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006421">
        <property type="term" value="P:asparaginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00776">
        <property type="entry name" value="AsxRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04318">
        <property type="entry name" value="EcAsnRS_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.930.10:FF:000016">
        <property type="entry name" value="Asparagine--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00534">
        <property type="entry name" value="Asn_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004522">
        <property type="entry name" value="Asn-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00457">
        <property type="entry name" value="asnS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003037">
        <property type="entry name" value="PRK03932.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF34">
        <property type="entry name" value="ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594">
        <property type="entry name" value="ASPARTYL/LYSYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="9">
        <location>
            <begin position="209"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="547" mass="60916" checksum="84FA8F19BE9C67D5" modified="2014-02-19" version="1">MAAISGVGAAKAITMAIAARPLRLKPYAATTALAFLSLHKSLFLPPSPFPSRRSFCAAALRTSGSRVEQFRKKLRVSEIKEGDGANVLGRDLVVQGWVRTLRLQSSVTFIEINDGSCLSNMQCVLNSEAEGYDQVESGLVTTGASVWVQGVVVKSQGSKQKVELKVNKIVLTGKSDPSFPIQKKRASKEFLRTKAHLRARTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIPSSQDTTDSPVDAIPKKNDRLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACASAYLQFVIKYVLDNCKEDMEFFNTWINKGIVDRLSDVADKDVVQITYTEAIDLLSGSNKKFEFPVKWGCDLQSEHERYITEEAFNGCPVIIRDYPKDIKAFYMRQNDDGKTVAAMDMLVPGIGELIGGSQREERLEYLEARLDELKLNKDAYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDVIPFPRTPGSAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEW5</accession>
    <name>V7CEW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G234500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Mitochondrion inner membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
            <orientation evidence="9">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the complex I NDUFS4 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEW5"/>
    <dbReference type="SMR" id="V7CEW5"/>
    <dbReference type="STRING" id="3885.V7CEW5"/>
    <dbReference type="Gramene" id="ESW27815">
        <property type="protein sequence ID" value="ESW27815"/>
        <property type="gene ID" value="PHAVU_003G234500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3389">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTIMKFD"/>
    <dbReference type="OrthoDB" id="3089at2759"/>
    <dbReference type="PhylomeDB" id="V7CEW5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.190:FF:000002">
        <property type="entry name" value="NADH dehydrogenase [ubiquinone] iron-sulfur protein 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.190">
        <property type="entry name" value="atu1810 like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006885">
        <property type="entry name" value="NADH_UbQ_FeS_4_mit-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038532">
        <property type="entry name" value="NDUFS4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12219:SF8">
        <property type="entry name" value="NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12219">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04800">
        <property type="entry name" value="NDUS4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4 9" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5 9" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU367010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="146" mass="16406" checksum="AF7FAE27D278B4CA" modified="2014-02-19" version="1">MANTLQRFLRGTMVRRFSTQALVETKPGEIGMVSGIPQEHLRRRVVIYSPARTASQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYSHVGDSALTFDSEAAAKAFAEKHGWEYSVKKPHTPLLKVKSYADNFKWKGPPKPAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF03</accession>
    <name>V7CF03_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G010700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GRAS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF03"/>
    <dbReference type="SMR" id="V7CF03"/>
    <dbReference type="STRING" id="3885.V7CF03"/>
    <dbReference type="Gramene" id="ESW28704">
        <property type="protein sequence ID" value="ESW28704"/>
        <property type="gene ID" value="PHAVU_002G010700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQN4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFLAWKD"/>
    <dbReference type="OrthoDB" id="1913536at2759"/>
    <dbReference type="PhylomeDB" id="V7CF03"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005202">
        <property type="entry name" value="TF_GRAS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31636">
        <property type="entry name" value="OSJNBA0084A10.13 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03514">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50985">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="19"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="69"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="VHIID" evidence="5">
        <location>
            <begin position="190"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="SAW" evidence="5">
        <location>
            <begin position="407"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="VHIID" evidence="5">
        <location>
            <begin position="221"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="19"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="84"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="485" mass="54826" checksum="EA029075AB0A490B" modified="2014-02-19" version="1">MDTTLFGVVRFQHQLQAQAQAQADQDQSLNNSTTTSSSRSSRQQNYPCPQEDEECFNFFMDEEDLSSSSSKHYYPYQPHPPSTTPTTTTDLSFSPTRDAAFPFQLSGKWAHDILLETARAVSDKNTTRLQQLMWMLNELASPYGDTDQKLASYFLQAFFSRITQAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAASAHKVMKEIGARMEKFARLMGVPFQFNVVHHLGQLSDFDFSALDIKEDEALAINCVNTLHSISALGSHREAVISSLRRLQPRIVTLVEEEADLDVGLEGLEFVKGIEECLRWFRVYFEALEESFPRTSNERLMLERAAGREVVDLVACSAADSVERRERAGRWTRRMHGGGFNTVAFSEEVCDDVRALLRRYREGWAMAQCSDAGIFLSWKDQPVVWASAWRSLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFD0</accession>
    <name>V7CFD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G255200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CFD0"/>
    <dbReference type="STRING" id="3885.V7CFD0"/>
    <dbReference type="Gramene" id="ESW28058">
        <property type="protein sequence ID" value="ESW28058"/>
        <property type="gene ID" value="PHAVU_003G255200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0431">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1717591at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031982">
        <property type="term" value="C:vesicle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030276">
        <property type="term" value="F:clathrin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072318">
        <property type="term" value="P:clathrin coat disassembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072583">
        <property type="term" value="P:clathrin-dependent endocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000009">
        <property type="entry name" value="Auxilin-related protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23172">
        <property type="entry name" value="AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23172:SF87">
        <property type="entry name" value="CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="4">
        <location>
            <begin position="1358"/>
            <end position="1422"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="537"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="614"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="851"/>
            <end position="873"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1038"/>
            <end position="1067"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1200"/>
            <end position="1262"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="1131"/>
            <end position="1197"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="1283"/>
            <end position="1322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="537"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="556"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="618"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="637"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1048"/>
            <end position="1067"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1200"/>
            <end position="1224"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="1228"/>
            <end position="1243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="1253"/>
            <end position="1262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1422" mass="161430" checksum="563D1DC582F560B7" modified="2014-02-19" version="1">MESLAHSRQPNKFPVTVSKKITGAAGGPGFPAETLYDHVYGGATRFAGGHSLSPRFEDYGEIFASFHAPRASAIPVLDLPSLDDGEVFFDFRNVACEYSEIFRGCEGLDFLLSYEDLFRDGVSEEDDGGDAEEEEAWTPVETDSFSGDLDHFGINEGMPNGDHLRSSDGISEFNVLYHKVNDTGNEALSKGKSHTSQLRNAPEFTHVFDETTHFHRTDPSLQVVDDVDLDMEFNASQARRNHLSEMDSHPVNFTSGEQVFGSDLDLHNECCRNDSHSCETFITVSHISLRTLPSQVPPPSRPPPVLDAKQEYTNGFHSNKEGVDFEETLGDTSPPFLDVEVDTNSSAAAIKDVMHRPEAKLRSAKELKERKKEFSESNVDSSYDAKVNEAKTAVNITKLDSLNDEGVQRIGKKKISSTDGRQKTRKAAPETLELLEGERLLNMFDETQIKESWSSQESDRRTGIGMWQEATEFFELVGTEESGKVITPTNHSDTMKLVHDTRAHEYGKKEKEALNIKAEYKKVKEVEGSQQEECKEKYKAGNGAHEQRKNIKKSKLSKEECRQREHVKNEEMAEIFELEKSEKERMVETQRKEHKQVEIEKSKEVDREMLSEVQWSTKHMESEKKRKEDEQLQLSMKRHEQSQRMKENGKIQREASALGGVKSEQRVKDSVKLEKFERSNDAINLSSHKENMTCKIEDEIILEATQIQNKKKLKETCENEEIGKSRKGSFTMEENDECLKHALEQLKNEKGLKQDFELEMNEERCRVTFELGENEPCERDQGKEKLSEICDGYRKGNRVKDVGDSIWLQNVLTQVPELQMNIGNETQGKKEIDCPSDLACDCEGTVDISRADSHSQKRERMLKDADKDGKDKGLDKALEQTEGNGEGIHLNFAKETNESDDNLLAAHSCSIHEENICIQELRQDPIADQEIGKSVTDCKVGEKKLEEVWLENLKDTGKKGAFEMSRGEVEHSGKVTCTSTNVYVNENSFNSEQACTEETKTTPQMSSSQANLCGDYGRNTVADEPATVQEAVNIQKPSQRARVLNSTKSKDKSLDEISSSKEKDVERIRRERELEKDRFRKIEEEMERERERQKDRMAVDTAVLEAERERERGKDRMAVDKSTLEARDRTYAEARERAERAAFERATAEARQRILAEARERLEKACAEARDKTYADKAASEARLKAQRTAVERATAEARERAMEKVKVERAASESRERLGRSVSDKFSVSSRNGGRQGSSSSQDILDPFCQNSSSSTHSRYPYSSVYGASSFTERSEREGESAQRCRARLERYRRTAERAAKALEEKNMRDLVAQKEQAERNRLAETLDIEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLZ3</accession>
    <name>V7CLZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">VTT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G139800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLZ3"/>
    <dbReference type="SMR" id="V7CLZ3"/>
    <dbReference type="STRING" id="3885.V7CLZ3"/>
    <dbReference type="Gramene" id="ESW30280">
        <property type="protein sequence ID" value="ESW30280"/>
        <property type="gene ID" value="PHAVU_002G139800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3140">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNRDCLF"/>
    <dbReference type="OrthoDB" id="3364966at2759"/>
    <dbReference type="PhylomeDB" id="V7CLZ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000045">
        <property type="term" value="P:autophagosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045014">
        <property type="entry name" value="TM41A/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="VTT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43220:SF7">
        <property type="entry name" value="SNARE ASSOCIATED GOLGI PROTEIN FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="VTT_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="196"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="231"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="VTT" evidence="6">
        <location>
            <begin position="97"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="255" mass="28028" checksum="5E12A1E1E6BC0C2B" modified="2014-02-19" version="1">MEGANTVVKQPVASPSKFPLSFWETTVASTVALIFALGLIGVYLTMPDSDYSFLKLPRTLQDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGRPILSSLWPEKLKFFQTQVARRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLATVIGLIPAAYVTVKAGLALGELKSMGDLYDFNSVATLFLIGVVSVTPTLISKNES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMT7</accession>
    <name>V7CMT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G240000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMT7"/>
    <dbReference type="SMR" id="V7CMT7"/>
    <dbReference type="Gramene" id="ESW31464">
        <property type="protein sequence ID" value="ESW31464"/>
        <property type="gene ID" value="PHAVU_002G240000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACANVGK"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000436">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At5g39350 family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000090">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001139">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF362">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="9"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="110"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="211"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="311"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="526"/>
            <end position="618"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW31464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="618" mass="68892" checksum="11C27CB7F0C250B3" modified="2014-02-19" version="1">MFDELSDPDVVSWNSMISGCVMNGRSWNGLKFFIQMLHFGIDMDLVTLVNVLVACANVGKLSLGRALHACGVKTGCSGDVVFDNTLLDMYSKCGYLKGATDVFVKMGETTIVSWTSIIAAYVRKGLYDDAIMLFDEMQSKGLRPDAYTVSSVVHACACSNSLDKGRNIHNFIKKNNMALNLPVSNALMNMYAKCGTMEEAHLIFSQIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQLKPNDITIACVLPACAGLAALEKGRELHGHILRKGYFSDLHVACALVDMYVKCGLVVLAQKLFDMIPKKDIILWTVMIAGYGMHGFGKEAVSTFEKMRIAGFEPDEACFTSILYACSHSGLLKEGWKFFNSMRSEFNIEPKLEHYACMVDLFVRSGNLSKAYKFIETIPIKPDAAIWGALLSGCGIHHDVELAEKVAEHIFELEPENTRYYVLLANIYAEAEKLEEVKKLQTKIGNGGFKKDQGCSWIEIQGKFNIFVAGDTSHPQAKRIDSLLRKLRMQMNGVGYYSKMRYALINADDMNKEVLLCGHSEKLAMAFGILNLSPGKTVRVTKNLRVCGDCHDMGKFMSKTTGRDIVLRDSNRFHHFKDGVCSCRGFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNF6</accession>
    <name>V7CNF6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">CG-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G256500g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CAMTA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNF6"/>
    <dbReference type="SMR" id="V7CNF6"/>
    <dbReference type="STRING" id="3885.V7CNF6"/>
    <dbReference type="Gramene" id="ESW31654">
        <property type="protein sequence ID" value="ESW31654"/>
        <property type="gene ID" value="PHAVU_002G256500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0520">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMSNDEW"/>
    <dbReference type="OrthoDB" id="407555at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070417">
        <property type="term" value="P:cellular response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106167">
        <property type="term" value="P:extracellular ATP signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010150">
        <property type="term" value="P:leaf senescence"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1900367">
        <property type="term" value="P:positive regulation of defense response to insect"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd23767">
        <property type="entry name" value="IQCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.190:FF:000003">
        <property type="entry name" value="Calmodulin-binding transcription activator 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.10:FF:000314">
        <property type="entry name" value="Calmodulin-binding transcription activator 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005559">
        <property type="entry name" value="CG-1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002909">
        <property type="entry name" value="IPT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23335:SF30">
        <property type="entry name" value="CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23335">
        <property type="entry name" value="CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03859">
        <property type="entry name" value="CG-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01833">
        <property type="entry name" value="TIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01076">
        <property type="entry name" value="CG-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51437">
        <property type="entry name" value="CG_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0010">Activator</keyword>
    <keyword evidence="10 16" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="6" id="KW-0106">Calcium</keyword>
    <keyword evidence="7" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="15" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0346">Stress response</keyword>
    <keyword evidence="14" id="KW-0804">Transcription</keyword>
    <keyword evidence="8" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CG-1" evidence="17">
        <location>
            <begin position="15"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="16">
        <location>
            <begin position="757"/>
            <end position="789"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW31654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1105" mass="125217" checksum="3B5B9789667E0956" modified="2014-02-19" version="1">MAEARHYVPPSQLDIEQIIVEAQHRWLRPAEICAILSNYTKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEEDENFQRRTYWLLEEELSNIVLVHYRQVKGTKSNYTCAKETEESLPYAQQTDKIMVKAEMDTSFSSTLRPNSYQVPSQTTDTSMNSAQLSEYEETESAFNSHASSEFYSFLELQRPVKKIIDQPADSYSPQPLINEQKKLPVIAEVNHISLTQDRKIIDIHNVGLTYESPKPLGFSSWEDILGNNGESQHVPFQPLFPEMQPDNMRVNSNFCQGDDIIVPHLTTSIAQLHDNGSIIQAEGSWQGYSVDSLRMSTWPIDSVHSSSACEVSCSKCEHEVNEVDFQKSLEQSLLHPHKQNKVLMLNDPQEILLNTKEEPKSDFEANRTLDGIEDTRFAFKRTLLDGFPAEEGLKKLDSFYQWMSKELGDVEESNKPSTSGAYWDTVESEVGSTTIPSQGHLDTYVLDPSVSNDQLFSIIDYSPGWAFEGSKTKIIISGRFLRSQQEAELCKWSCMFGEVEVPAVILTKDVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNCTQEVNTAGDDRASTLSTFSRRFGELLYLGHAFPQNSYSISGNEKSQLRSKISSLLRGEDDVWDKLLELTLQKEFSPEDLQEHLLQNLLKDRLHAWLLQKIIDDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFYGRERTVAFLVSLGAATGLVTDPCPEYPSGRPPADLASANGHKGIAGYLSESYLSEQLTTLDLNKDVGESPGTKVVQRIQNIAQVNDLDGLSYEQSLKDSLAAVCNATQAAARIHQVFRMQSFQRKQLEEFGDDKFGISDERALSLVKMNGKSHKSGSRDEPVHAAAIRIQNKFRGWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWTVGILEKVILRWRRKGSGLRGFKSEANSEVTMIQDITSPEEDYDFLKEGRKQTEQRLEKALARVKSMVQYPEARDQYRRVLNVVTEIQENQVKHDSSCNNSEETRDFNNLTDLEALLEEDIFMPTAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNK9</accession>
    <name>V7CNK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G158500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNK9"/>
    <dbReference type="STRING" id="3885.V7CNK9"/>
    <dbReference type="Gramene" id="ESW30506">
        <property type="protein sequence ID" value="ESW30506"/>
        <property type="gene ID" value="PHAVU_002G158500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZTI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ATDMSQV"/>
    <dbReference type="OrthoDB" id="153872at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009909">
        <property type="term" value="P:regulation of flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010402">
        <property type="entry name" value="CCT_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045281">
        <property type="entry name" value="CONSTANS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31319:SF103">
        <property type="entry name" value="CCT MOTIF FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31319">
        <property type="entry name" value="ZINC FINGER PROTEIN CONSTANS-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06203">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51017">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCT" evidence="4">
        <location>
            <begin position="218"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="297" mass="33890" checksum="DA604E107C88C99C" modified="2014-02-19" version="1">MSSDLYTFDIPFPRHSDTDNMVSYDADGNLMFLSDPYSFPFLTASPVHDVPQGNPSFFSFSPQEKESLYHADPAQPLSNGSNIKSEFRSFSALHGSEVTTSEECQMVVDYFRNHHFLSQTSHASDSASKVIQRSFSCNSFGGKPDFPFEPHPDALMDTPNFQCHALLSPENNFFMGQMRRVCSTGDLQNTKATDMSQVESPLLEEAYFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKALSSTSTTEEYEDEFWVEFIEGLNEEVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPM4</accession>
    <name>V7CPM4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G216400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPM4"/>
    <dbReference type="Gramene" id="ESW31180">
        <property type="protein sequence ID" value="ESW31180"/>
        <property type="gene ID" value="PHAVU_002G216400g"/>
    </dbReference>
    <dbReference type="OMA" id="LMLSHYH"/>
    <dbReference type="OrthoDB" id="1432094at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="74" mass="7913" checksum="EBD59C6C2A73F3B7" modified="2014-02-19" version="1">MAPTAAMLLLSHNAPSSSSSSSSVTATTFSVLKDSALKWVAKHNPVAKAGSEKNIIQTQNHCMFHPSAVEKRFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR43</accession>
    <name>V7CR43_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G271100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PC-esterase family. TBL subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR43"/>
    <dbReference type="SMR" id="V7CR43"/>
    <dbReference type="STRING" id="3885.V7CR43"/>
    <dbReference type="Gramene" id="ESW31823">
        <property type="protein sequence ID" value="ESW31823"/>
        <property type="gene ID" value="PHAVU_002G271100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSWQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLYETGC"/>
    <dbReference type="OrthoDB" id="630188at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016413">
        <property type="term" value="F:O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029962">
        <property type="entry name" value="TBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026057">
        <property type="entry name" value="TBL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025846">
        <property type="entry name" value="TBL_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285:SF34">
        <property type="entry name" value="PROTEIN TRICHOME BEREFRINGENCE-LIKE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285">
        <property type="entry name" value="PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13839">
        <property type="entry name" value="PC-Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14416">
        <property type="entry name" value="PMR5N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Trichome birefringence-like N-terminal" evidence="9">
        <location>
            <begin position="92"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="Trichome birefringence-like C-terminal" evidence="8">
        <location>
            <begin position="145"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF14416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW31823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="434" mass="49647" checksum="440C445C72DC6F41" modified="2014-02-19" version="1">MSALNRTISFNKTSSSNRRSLAIGSPRLNHNNTNNNRFGCVSLRFQVLVIIASVFSFFVAVGGYMYVLPSLGQAFSNVQVLSSEGNNGSVRDCDVFDGSWVQVQDHPLYNATECPFVEAGFDCLGNGRSDRDYLGWRWKPRSCEIPRFDVRGILEMLRSKRVVFVGDSMSRTQWESLICMLMAGVEDKRGVYEVNRNQITKKIRFLGVRFSAFNFTIEFFRSVFLVQQGRMPRHAPKRVKSTLLLDKLDDISDQWVNSDILIFNTGHWWVPSKLFDMGCYFKVGSSLKLGMSIPAAFRIALETWASWVEREINKNRTRIFFRTFEPSHWSDLTRRICNVTQYPTLETDGSDQNLFSDTILDVVKNVNIPINVLHVTSMSAFRSDAHVGNWSDNPSIQDCSHWCLPGVPDMWNEIILSQLFSESEIPFQQIESLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR80</accession>
    <name>V7CR80_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G2663002g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR80"/>
    <dbReference type="STRING" id="3885.V7CR80"/>
    <dbReference type="Gramene" id="ESW31770">
        <property type="protein sequence ID" value="ESW31770"/>
        <property type="gene ID" value="PHAVU_002G2663002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1884">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2018754at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="57"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="67" mass="7280" checksum="31C4213F97F46598" modified="2014-02-19" version="1" fragment="single">ENGFGVEHLLHRGRALAAFNQILGHRVQNLKSEEESSTSAHGQTNIQSDVHSLLSPLGQSEETLLSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRK1</accession>
    <name>V7CRK1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G248300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRK1"/>
    <dbReference type="SMR" id="V7CRK1"/>
    <dbReference type="STRING" id="3885.V7CRK1"/>
    <dbReference type="Gramene" id="ESW31561">
        <property type="protein sequence ID" value="ESW31561"/>
        <property type="gene ID" value="PHAVU_002G248300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTVY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWFCSSQ"/>
    <dbReference type="OrthoDB" id="1903104at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003714">
        <property type="term" value="F:transcription corepressor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054292">
        <property type="entry name" value="DUF7028"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056511">
        <property type="entry name" value="IDM1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042163">
        <property type="entry name" value="PHF12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309">
        <property type="entry name" value="PHD FINGER PROTEIN 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46309:SF15">
        <property type="entry name" value="PHD-FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22970">
        <property type="entry name" value="DUF7028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23209">
        <property type="entry name" value="IDM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DUF7028" evidence="5">
        <location>
            <begin position="12"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="Increased DNA methylation 1 C-terminal" evidence="6">
        <location>
            <begin position="386"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="142"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="142"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF22970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF23209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="493" mass="55883" checksum="2ADF2821237D14BD" modified="2014-02-19" version="1">MAAPTIPPPPPINIEPGNCPEAVKQWYYLTSLPSNRRKSTLCRELSLQAKRHLCYLGWKFWYIDKKEKWELRYTSPVSGKNYVSLARACKGCIEEDGVCNGNPQNRKENNVLEYPTSSQSKKETIESNLKENNVLEYPTCQPTQETTESGKITTCKKRQRDDKDDESGEDFTSMNSNRGKSVRAIVRQNGFILKDGQSLLDCQKEAQPNGLVEEEEVDDCGYRNDSICAVCCYGGKLVLCDGCPSSFHLRYLGLTHVPDGDWFYPVCSCKICRRPRCRDDSLRNEGVNSVLVCHQCEGKYHIGCLKAPAPAHTQMEKEEDDVGKGNWFYSTDCEEIFFRLHDLLGKTINVAPYNLTWTLLKAVKKDGSGENESKLRAALDVLHESFDPVIDVFSGRDVIADVVFSRGSKDDRFNYRGFYTVVLERDKEMVCVATVRVFGKRVAEIPFVATQCRRQGMCGILMNEIEKLLTYLGVEREVGSAFLVHCNRLDKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT65</accession>
    <name>V7CT65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G332300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT65"/>
    <dbReference type="SMR" id="V7CT65"/>
    <dbReference type="STRING" id="3885.V7CT65"/>
    <dbReference type="Gramene" id="ESW32558">
        <property type="protein sequence ID" value="ESW32558"/>
        <property type="gene ID" value="PHAVU_002G332300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1455">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPEARHE"/>
    <dbReference type="OrthoDB" id="2498029at2759"/>
    <dbReference type="PhylomeDB" id="V7CT65"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000117">
        <property type="entry name" value="Monoglyceride lipase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051044">
        <property type="entry name" value="MAG_DAG_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11614">
        <property type="entry name" value="PHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="2">
        <location>
            <begin position="125"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="379" mass="41647" checksum="90CE670830FCDB19" modified="2014-02-19" version="1">MAMAFRGNQASTFILTSGASGRIRALFSLRALKALLSFFNAVLLLLLFPFRKGTLLSSRFAWKSTAASTTTARRALAIRRVMEDADADADSPTHPTSLRDYRLIVSSRGDTIFTQSWIPHSPNNNIRGLVFLMHGLNEHSGRYTNFAKHLNANGFKVYAMDWLGHGGSDGLHGYVHSLDDAVSDMKTFLEKVLNENPGLPCFCFGHSTGAAITLKALLDPKFEARIAGAVLTSPAVGVAPSHPILLALAPIASFLLPTYQCSSAYKKGSVVSRDPEALIAKYSDPLVCTGPLRVRTGYEILRITSYLQKNLKKLRVPFFVLHGTADSVTDPLASQKLYVEASSTDKNIKLYDGFLHDLLFEPERDAITQDIIQWLNSRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWB7</accession>
    <name>V7CWB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Actin-related protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G086500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the actin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWB7"/>
    <dbReference type="STRING" id="3885.V7CWB7"/>
    <dbReference type="Gramene" id="ESW33638">
        <property type="protein sequence ID" value="ESW33638"/>
        <property type="gene ID" value="PHAVU_001G086500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0677">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="5132116at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000148">
        <property type="entry name" value="Actin, alpha skeletal muscle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00190">
        <property type="entry name" value="ACTIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW33638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="333" mass="38093" checksum="BE27D03AFF361199" modified="2014-02-19" version="1">MDNRNVVVCDNGTGYVKCGFSGENFPTSVFPCVVGRPMLHYEESLTEQELKDIVVGKSCADLQHQLDVSYPLNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDSPLNPLKNIEKMGEMMFEKYNFAGVNFQIQAVLTLYAQGLLTGLVIESGDGVIHVVPIVDGCPYPHINKQMNIAGRHITSYLVDLLSRRGYALDRTTDFETVREIKEKLCYLSYNYKREYQLGIETTILVKNYTYEFLVKILFLKIEGQKSCYVDTSICSSMNLNSYAFQNFCFRMEGIKVGTERFQAPEVLFTPELIDVEGDGMADMVFRCIQEMDIDNRMTRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWH4</accession>
    <name>V7CWH4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G160900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWH4"/>
    <dbReference type="Gramene" id="ESW34537">
        <property type="protein sequence ID" value="ESW34537"/>
        <property type="gene ID" value="PHAVU_001G160900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INECVRW"/>
    <dbReference type="OrthoDB" id="1750937at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040256">
        <property type="entry name" value="At4g02000-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31286:SF176">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31286">
        <property type="entry name" value="GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW34537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="288" mass="33314" checksum="A276E14B445DF2C9" modified="2014-02-19" version="1" fragment="single">RGSSDRVLRESFHQVQRVTSTRGIAWCGGGNDRACAQWWCGGGCFGNYMRYSFVRVTHFRIDETEYLAGLEECKTHLHGRVILSKGDKPLTHLDLTKKLQPVWKALGPWKAIPLGKGFYEFEFASLEDMRWVLRMGSLKLSPGFLRLFAWPKDFVPTTMKSTKTQAWVRIYSLPLEYWRPHVIFSIIKCLGTPLVLDENTMRKKRGMFARVLVDIDMLSPLPDHLWVERSDFTFVAGVEYEWLPPFCSHCKVIGHELAQCRVLHDQGRAPVSQHKSSHKIIFDERDQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWQ8</accession>
    <name>V7CWQ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">S-acyltransferase</fullName>
            <ecNumber evidence="11">2.3.1.225</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Palmitoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G090700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="11">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="11"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWQ8"/>
    <dbReference type="SMR" id="V7CWQ8"/>
    <dbReference type="Gramene" id="ESW33690">
        <property type="protein sequence ID" value="ESW33690"/>
        <property type="gene ID" value="PHAVU_001G090700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1311">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSEHGGD"/>
    <dbReference type="OrthoDB" id="4096362at2759"/>
    <dbReference type="PhylomeDB" id="V7CWQ8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019706">
        <property type="term" value="F:protein-cysteine S-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006612">
        <property type="term" value="P:protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883:SF43">
        <property type="entry name" value="PALMITOYLTRANSFERASE APP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883">
        <property type="entry name" value="ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0564">Palmitate</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="194"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="239"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="13">
        <location>
            <begin position="149"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="357"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="377"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="421"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW33690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="435" mass="49200" checksum="44D1C80E03DE32FB" modified="2014-02-19" version="1">MYVVPPPQRSDQESGSGDFRVYQAWKGSNKFFLQGRFIFGPDVRSLALTIFLIVAPVAFFCVFVARKLMDAFSDHWGISIMAVAVVFTVYVLVLLLLTSGRDPGIIPRNAHPPEPEGLDSNLDVSAGQTPQLRLPRFKEVEVNGIPIKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFAFCWVYIIRIMAAEETTIWKAMIKTPASIVLIIYTFISMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRANPYNKGVLNNFKEIFCISIPLSKNKFRATVPKEPALPTRSVGGSYMNQNMGKVGEDIEMGRKTVWEMGAGIDDSEAGLSNDRVNVKDGELSPEMRTTVDDTDRAGMHPRRSSWGRKSGSWEMSPEVLALAARVGEPNRVGGNSSSSLTQDNRHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYE1</accession>
    <name>V7CYE1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G141400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYE1"/>
    <dbReference type="SMR" id="V7CYE1"/>
    <dbReference type="Gramene" id="ESW34305">
        <property type="protein sequence ID" value="ESW34305"/>
        <property type="gene ID" value="PHAVU_001G141400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDZM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHEREIH"/>
    <dbReference type="OrthoDB" id="1436768at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="89" mass="9766" checksum="0B2326BF605186B1" modified="2014-02-19" version="1">MKIRSSRTLGAVLALVMVHFLLFSLYSLSHEQIFSGERSLSVSRELLSSSLASFSTSINKISGSRKQKSKDVEPSLRKAPSSIPNPTQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7D351</accession>
    <name>V7D351_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">VQ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G251600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D351"/>
    <dbReference type="STRING" id="3885.V7D351"/>
    <dbReference type="Gramene" id="ESW35636">
        <property type="protein sequence ID" value="ESW35636"/>
        <property type="gene ID" value="PHAVU_001G251600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUSJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQTHVFD"/>
    <dbReference type="OrthoDB" id="780193at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008889">
        <property type="entry name" value="VQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039609">
        <property type="entry name" value="VQ_15/22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179">
        <property type="entry name" value="VQ MOTIF-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179:SF4">
        <property type="entry name" value="VQ MOTIF-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05678">
        <property type="entry name" value="VQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VQ" evidence="2">
        <location>
            <begin position="192"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="157"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="112"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="169"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="182"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="479" mass="50582" checksum="CBB00A80A47B244A" modified="2014-02-19" version="1">MDSPNSGSMQSSSTAGDDDYNSRADPSSSSSLSAFLNNNPVPPPQPTTLTTLATLTTHVAAPFQTHVFDPLSNYLDPTQRSQSHPNATQILNLDMVWNTVARSEPDLAGLMPSSSSPSPHNNSNNQGFLLSQLGAGQSQTRGGGAVNAAVSAFPTSLAPESGSPRGGFEQNSGNANTNVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFASSNASSSVLLRSASSHLEQPSSQTHTQTPSYLLRPFAHKVQAQPSSIPHNNSFSSMLNTLASNNNSGSGSASIHYQQHSLNMHNPILSLQSILGNNDSSVLVGSKTQQQQPSLEITPGTVDSHLKMSGLEELGLRHAHVGGHHHHHQNMNMVSSSSDGALSRVNNNISINNNMRGPSSADWAQAQRIGGSNDGGVLRSLSGGTATGTLNYRSSVSDFHGEKGAPDCAVAARSEGMVESWINCSSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0U2</accession>
    <name>A0ACC3P0U2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L008143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14028" checksum="D5C4EFC583BD1653" modified="2026-01-28" version="1">MEMEYKASLMKRRRGGGCTTRLQMHAPASLDIDKVLCDRPSNPFGEVSKAIPLLSPLTFSHQPIYEDITIHERTSQNIENSNGSGMNEDRTPSTGWEHPAMASFPQASSSSFCSFFQKKCVCVNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2000-05-01" modified="2026-01-28" version="99" xmlns="https://uniprot.org/uniprot">
    <accession>Q9SE40</accession>
    <name>Q9SE40_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">sec61</name>
        <name evidence="15" type="ORF">PHAVU_011G166200g</name>
    </gene>
    <organism evidence="14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="1999" name="Plant Physiol." volume="121" first="1383" last="1385">
            <title>The electronic plant gene register.</title>
            <authorList>
                <person name="Dyer J.M."/>
                <person name="Vauclare P."/>
                <person name="Kawagoe Y."/>
                <person name="Murai N."/>
            </authorList>
            <dbReference type="PubMed" id="10594126"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="14">Cotyledon</tissue>
        </source>
    </reference>
    <reference evidence="15" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <dbReference type="EMBL" id="AF190652">
        <property type="protein sequence ID" value="AAF18411.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="Q9SE40"/>
    <dbReference type="SMR" id="Q9SE40"/>
    <dbReference type="STRING" id="3885.Q9SE40"/>
    <dbReference type="Gramene" id="ESW05271">
        <property type="protein sequence ID" value="ESW05271"/>
        <property type="gene ID" value="PHAVU_011G166200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1373">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="XLFVAGL"/>
    <dbReference type="OrthoDB" id="1493138at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3370.10:FF:000002">
        <property type="entry name" value="Transport Sec61 subunit alpha isoform 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="entry name" value="SecY subunit domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030659">
        <property type="entry name" value="SecY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019561">
        <property type="entry name" value="Translocon_Sec61/SecY_plug_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00967">
        <property type="entry name" value="3a0501s007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006341">
        <property type="entry name" value="PRK08568.1-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="SECY/SEC61-ALPHA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10559">
        <property type="entry name" value="Plug_translocon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004557">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="Preprotein translocase SecY subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00755">
        <property type="entry name" value="SECY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0811">Translocation</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="118"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="288"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="418"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="442"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="Translocon Sec61/SecY plug" evidence="13">
        <location>
            <begin position="42"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF10559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="AAF18411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW05271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="476" mass="52122" checksum="1D9C90870E350F9E" modified="2000-05-01" version="1">MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVDLLGKWKESEYGGGQSAPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF89</accession>
    <name>V7AF89_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">E3 SUMO-protein ligase SIZ1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G073200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein sumoylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PIAS family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF89"/>
    <dbReference type="SMR" id="V7AF89"/>
    <dbReference type="STRING" id="3885.V7AF89"/>
    <dbReference type="Gramene" id="ESW04179">
        <property type="protein sequence ID" value="ESW04179"/>
        <property type="gene ID" value="PHAVU_011G073200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2169">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHGSINC"/>
    <dbReference type="OrthoDB" id="28127at2759"/>
    <dbReference type="PhylomeDB" id="V7AF89"/>
    <dbReference type="UniPathway" id="UPA00886"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061665">
        <property type="term" value="F:SUMO ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016925">
        <property type="term" value="P:protein sumoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd15570">
        <property type="entry name" value="PHD_Bye1p_SIZ1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16792">
        <property type="entry name" value="SP-RING_Siz-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.720.30:FF:000014">
        <property type="entry name" value="E3 SUMO-protein ligase SIZ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.720.30">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003034">
        <property type="entry name" value="SAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036361">
        <property type="entry name" value="SAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031141">
        <property type="entry name" value="SIZ1/2_SP-RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004181">
        <property type="entry name" value="Znf_MIZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782:SF102">
        <property type="entry name" value="E3 SUMO-PROTEIN LIGASE SIZ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10782">
        <property type="entry name" value="ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02037">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02891">
        <property type="entry name" value="zf-MIZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00513">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68906">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50800">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51044">
        <property type="entry name" value="ZF_SP_RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SAP" evidence="12">
        <location>
            <begin position="11"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="SP-RING-type" evidence="13">
        <location>
            <begin position="346"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="513"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="541"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="799"/>
            <end position="880"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="811"/>
            <end position="833"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="844"/>
            <end position="854"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW04179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="880" mass="95740" checksum="B2D2F9514A37E725" modified="2014-02-19" version="1">MDLVPSVKEKLNYFRIKELKDVLTQLHLSKQGKKQDLVDRILSVLSDEQVSKMWAKKNAGGKEQVAKLVDDTYRKMKISGATDLASKGQGASDSSSVKVKGEIDDSFQPETKIRCLCGSRLETGDLVKCDDRRCQVWQHISCVIIPEKPAEGIPPVPDKFYCELCRLNRADPFWVAVAHPLLPVKLTTTSNPTDGTNPVQSVERTFQLTRADKDLVSKPEVDVEAWCMLLNDKVPFRMQWPQYTDLQVNGVPVRATNRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVRRRNMQQILNLIPKESDGERFEDALARVCRCVGGGNTDGDADSDSDLEVVSDTFSVNLRCPMSGSRMKIAGRFNPCIHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMLNCGEEITEVEVKPDGSWRVKTKSESERQELGSLAQWHLPDGSPCVSADGDFKRVDTLKQVKQEGVSDSPTGLKLGIRKNRNGVWEVSKPEGTNTSSGNKLKGVFGNPEQVVIPMSSSATGSGRDGDDPSVNQGGGGNIDYSAATGIEIDSLCLNNVDLAYEYTAHDTSAQAGGTEVIVLSDSEEDNDLLVSPPIAYRNNQNDATDGYSVQPPVIVDSYTEDHNLVGGNSCLGLFPNDDDFGMSSLWSMPSGSQAGPGFQLFGSDADVSDALVHLQHGPVNCSSSLNGYALAPDTALGSGSILHDSSAGRLDADLNGGLVDNPLAFGGDDPSLQIFLPTRPADSSIQNELRDQANVANGVCTEEDWISLSLGGGAGGSNGDASTQNGLNSRHQIPTRDVGTNTLDDTASLLLGMNDVRTDRPSRQRSDSPFSFPRQRRSVRPRLYLSIDSDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF98</accession>
    <name>V7AF98_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G054800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF98"/>
    <dbReference type="STRING" id="3885.V7AF98"/>
    <dbReference type="Gramene" id="ESW03950">
        <property type="protein sequence ID" value="ESW03950"/>
        <property type="gene ID" value="PHAVU_011G054800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1877">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHTYNIA"/>
    <dbReference type="OrthoDB" id="19232at2759"/>
    <dbReference type="PhylomeDB" id="V7AF98"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049152">
        <property type="entry name" value="EFR3-like_ARM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055296">
        <property type="entry name" value="SRL2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46087:SF19">
        <property type="entry name" value="CYCLIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46087">
        <property type="entry name" value="PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21052">
        <property type="entry name" value="EFR3_ARM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="831"/>
            <end position="850"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="986" mass="110536" checksum="005AD9F55753B9B4" modified="2014-02-19" version="1">MGVMSRRVLPVCGNLCCVCPSMRASSRQPVKRYKKLLADIFPRNQEAELNDRKIGKLCDYASKNPLRIPKITDYLEQICYKDLRYETFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRTLLEQTRTDEIRILGCNILFDFLECQTDGTYIFNLEGFIPKLCQLAQEVGEDERALRLRSAGLQALSYMVRFMGEHSHLSMVLDEIISVTLENYTSLQSNSKSSVENTLNSESLDPLVQGFRKVEDPLTDITKKDPLLLKAVTGKEMDFVLDTEKDPTYWSKVCLYNMVKLAREATTLRRVLEPLFHYFDSENQWSSEKGVAAHVLMYLQSLLAESGDNSCLLLSVLVKHLDHKNVAKQPILQINIINTATKLAQNVKQQASVAILGAISELIKHLRKSLQNSAEASSFENDVFKLNTELQFALEMCIFHLSNKVGDVGPILDLMAVALENTSTTTTIARTTISAVYQTAKLITSIPNVSYYKKAFPDALFHQLLLAMAHSDHETRVGAHRIFSVVLMPSLFSPQLDQKTKMSEKVPSESFSIQHESLLGAEYMNGKHLEGKAVVGVREKYAIHPYHVHIFSGALTDGKHDLSSFRLSSHQVSLLLSSIWIQATSMEGGPANFEAMAHTYSIALLFTRSKTSSYMALVRCFQLAFSLMSLSLDQEGGLQPSRRRSLFTLASYMLIFSARAGNFLELIPKVKASLTNTTVDPFLELVDDVRLCAVYKESEKIVYGSQEDDVSAMKTLSAVKLDDKELKETVISFFLAKFSELSEDELSTIKKQLVQGFSPDDAYPLGPPLFMETPGQSSPLAQIEFPDFDEIVNPEALMDEETRPELSGSLSDRKSSLSSNNPDILSVNQLLQSVLETARQVASFPTSSTPVPYDQMKNQCEALVTGKQKKMSVLHSFRHQQETRAIVLSSENELKVSSLPIQTLEYSEDDLKLVSQQQFQAQYQVRPCSYDFGQQHSLKLPPASPFDKFLRAAGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7AH93</accession>
    <name>V7AH93_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G137800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AH93"/>
    <dbReference type="Gramene" id="ESW04934">
        <property type="protein sequence ID" value="ESW04934"/>
        <property type="gene ID" value="PHAVU_011G137800g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753383" evidence="1">
        <location>
            <begin position="27"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="80" mass="8796" checksum="219B63929C279CE5" modified="2014-02-19" version="1">MGVVNKIALSVVIFALIACYGNGVLSIPNTRDVYKYSENNQVDGKQQCDTNHDCGNFCNPPCDTSFCNMATHRCECPCDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHY6</accession>
    <name>V7AHY6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G132700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHY6"/>
    <dbReference type="Gramene" id="ESW04875">
        <property type="protein sequence ID" value="ESW04875"/>
        <property type="gene ID" value="PHAVU_011G132700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5NK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="120" mass="11949" checksum="8668BD5BEE89AD68" modified="2014-02-19" version="1">MVKLPTESESVGNVRRLILKNIVNTFGVCEKKYMARHFVVVVVDGGDANEGLVLHSPPILLFLMIIASLSMISIIIFACGDDNNNSNRRGGACAGGGGGYGGGGCGGGGGCGGGGGCGGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI44</accession>
    <name>V7AI44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NHL repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G166300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI44"/>
    <dbReference type="STRING" id="3885.V7AI44"/>
    <dbReference type="Gramene" id="ESW05272">
        <property type="protein sequence ID" value="ESW05272"/>
        <property type="gene ID" value="PHAVU_011G166300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR9M">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SRFNHPK"/>
    <dbReference type="OrthoDB" id="342730at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="entry name" value="TolB, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001258">
        <property type="entry name" value="NHL_repeat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13833">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13833:SF73">
        <property type="entry name" value="NHL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01436">
        <property type="entry name" value="NHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63829">
        <property type="entry name" value="Calcium-dependent phosphotriesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755565" description="NHL repeat-containing protein" evidence="3">
        <location>
            <begin position="25"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="352"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="372" mass="41058" checksum="334506692848D5D0" modified="2014-02-19" version="1">MTNHLFCTFTVLALTFSLQFQAHAAPSGSLIEHLSSFLKWRRSNSKIPQSDGNVLQFENGYVVETVVEGNDIGVIPHRIRISAENGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDSRFNHPKGITVDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNIAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIILNREDCEYQSSSISLTDVLTVVGAVLVGYATCRLQQGFGSSFIPKTKPPSKSEFKGQGHKEETEWPSFSKLLVYLSNLSMETFSSFFQIIPWRSKSDSTKRGLTPLKDGLKMPEDEVEAPMGDMQRTFDSVVTETKQVHTPNTAEKYSEMRLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIE0</accession>
    <name>V7AIE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G145400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIE0"/>
    <dbReference type="SMR" id="V7AIE0"/>
    <dbReference type="STRING" id="3885.V7AIE0"/>
    <dbReference type="Gramene" id="ESW05025">
        <property type="protein sequence ID" value="ESW05025"/>
        <property type="gene ID" value="PHAVU_011G145400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0255">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLGHWWW"/>
    <dbReference type="OrthoDB" id="3936150at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24064">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 22 MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="376"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="405"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="433"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="461"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="7">
        <location>
            <begin position="52"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW05025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="567" mass="61300" checksum="A921FB21553BF43B" modified="2014-02-19" version="1">MATKSPTDSKDQGAAPLIWAEEERTGASSEKLCIDEMLQKYCGEFGRWQLRHFVLTSLAWALEAFHTMVMIFADREPEWRCLDGAAGSGCNPAAKSVCRFEPGSWEWVGDSTVVEWGLFCADKFKVGLVQAVFFGGCMIGAGTFGHLSDSVLGRKGSLTVVCALNTIFGTLTAFSPNYAFYILFRFLTGCSTGGVGLCAFVLATEPVGPTNRGTTGMSTFYFFSSGIAILSAIAYIFSTWRKLYIASSIPSLLFLLFILPFISESPRWYLVRGRKSEAMKVITAMATTNGNHIPEGVFLTLDHQSAQFPPPLSSLSCNSLQEQVLSDVNSLNESQNLEKLVSDSILLGSAKGSACQVAEAGSLLDVIRSPITRSRLILAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITALLLDRWGRKPLTIATLWFSGAFCFAGSLVRNVGVWKGVRMMCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVMGGSFPFIIFAICGISGGFFAFYLPETLNQPLYDTLAGMLAKENSVTSSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJT9</accession>
    <name>V7AJT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Protein-S-isoprenylcysteine O-methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G187300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJT9"/>
    <dbReference type="SMR" id="V7AJT9"/>
    <dbReference type="STRING" id="3885.V7AJT9"/>
    <dbReference type="Gramene" id="ESW05529">
        <property type="protein sequence ID" value="ESW05529"/>
        <property type="gene ID" value="PHAVU_011G187300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05530">
        <property type="protein sequence ID" value="ESW05530"/>
        <property type="gene ID" value="PHAVU_011G187300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2628">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IPGGWNN"/>
    <dbReference type="OrthoDB" id="422086at2759"/>
    <dbReference type="UniPathway" id="UPA00753"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006656">
        <property type="term" value="P:phosphatidylcholine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007318">
        <property type="entry name" value="Phopholipid_MeTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12714:SF11">
        <property type="entry name" value="PROTEIN C-TERMINAL S-ISOPRENYLCYSTEINE CARBOXYL O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12714">
        <property type="entry name" value="PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04191">
        <property type="entry name" value="PEMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="8" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="140"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="177"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="205"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="245"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="333"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="394" mass="45081" checksum="C9B492198FFD867C" modified="2014-02-19" version="1">MEAAKVLSHSKTAPFGFSIVSNKVSLRPFNKHFRADVLANRPKSISFQLNCTYGNPFSPVPKPARKRADLLSSLSCSISSNASTESQNPVLEFFRSLSFDSIKATLLQLTPINVVKCSGLLCIIIAATKWTMNVLFSPFFWMYFSWTWLFWPWLVAIALAVYGLYCFRKHLHGEANIFEQLAIVTSVFTWLTLVPTAHFNGFLEGWPFVFFFVYHYFFFFNVSVRKRLYGDYNARPHDPKWDINVPTLSRILFSAGVMVGHWLAAFEGPELHLIPGGWSNLGIWALIITTLLMQYNATLYLAKYSENVVEPSAVVQFGPYRWVRHPIYSSTMLLFVTNCIALRAPLSLLFIVAVCLLYYKQKADIEEALMVETFGRSYTDYASKVKFKLIPFIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK73</accession>
    <name>V7AK73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cellulose synthase-like protein H1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G101500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK73"/>
    <dbReference type="Gramene" id="ESW04516">
        <property type="protein sequence ID" value="ESW04516"/>
        <property type="gene ID" value="PHAVU_011G101500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTT0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HERFEHK"/>
    <dbReference type="OrthoDB" id="72851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000145">
        <property type="entry name" value="Cellulose synthase-like protein H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="566"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="657"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="690"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="456"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW04516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="746" mass="84596" checksum="0B4C58D869229054" modified="2014-02-19" version="1">MANQNSFPLYEKHWYKHTYKRVTESLLLILLLLLLGYRVISVNNYSFPWFVAFVCESWFTISWFFTLATQWSPAVIKTYPERLLQSVQDLPPVDLFVTTADSVLEPPIITVNTVLSLLALDYPPHKLACYVSDDGCSPLTFYALQEASKFAKFWVPFCKKYDVQIRAPFRYFSDKLEVSTSNNTPQFKQEWLQMKDMYGDLSRKIELEASQKSNPNYGDFAVFSNTEKTNHPSIIKVIWENKEELEDGLPHLIYISREKRPKHSHHFKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKIVHDALCILLDPKGQKEVAFAQFPQQFYATLKDDPFGNQMAILIKYFATGLAGLQGPFYAGTNCFHRRKVIYGLSPDYVHKGNSISEEELKQKFGASKEIMKSAGCALEGRRYSPNADNIAQVIDLASQVASCGYEYGTGWGKQVGWIYGSLTEDVLTGLTIHEKGWRSELCTPRPIAFTGFAPGGGPTTMAQQKRWAIGLLEIFLSKHCPIFATLFHKLTFRQCIAYMWIMNWGLRPFFEVCYASLLAHCIITNSNFLPQEHGICIPVAFLVIYKVYTVSVYLAEGLSVKAWWNNQRMSRITPMNAGFCAFLSVLLKKLRISETVFDITKKDLPPTDDAGDDKDAARYTFDESLVFLPGTTILLLQLTAIMIKLLGMQAVVATESKKDCGIGEIFCSVYLIICYWPFLKGLFETGKYRIPMSTIYKSTILTSLFVHLSRNTVAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKF0</accession>
    <name>V7AKF0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G170900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKF0"/>
    <dbReference type="Gramene" id="ESW05328">
        <property type="protein sequence ID" value="ESW05328"/>
        <property type="gene ID" value="PHAVU_011G170900g"/>
    </dbReference>
    <dbReference type="OMA" id="CNSITTR"/>
    <dbReference type="OrthoDB" id="1435444at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8173" checksum="FDF97CDDCA99AEB4" modified="2014-02-19" version="1">MQASLSNQKNTEASIRNLETQVGQLAKQLADNQGSQFSANTQTNPKEHCNSITTRSGIIIGKGIGKNLVWGGGFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKI0</accession>
    <name>V7AKI0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G111400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKI0"/>
    <dbReference type="STRING" id="3885.V7AKI0"/>
    <dbReference type="Gramene" id="ESW04626">
        <property type="protein sequence ID" value="ESW04626"/>
        <property type="gene ID" value="PHAVU_011G111400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPPK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TICKEWA"/>
    <dbReference type="OrthoDB" id="1911782at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36017">
        <property type="entry name" value="EMBRYO DEFECTIVE 1381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36017:SF1">
        <property type="entry name" value="EMBRYO DEFECTIVE 1381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="56300" checksum="F37E3A9FDF1801FE" modified="2014-02-19" version="1" fragment="single">MAAKKAWRIVPRPLLETILNNHAQHHRVPQPLLLHGPRGVGKTTLILKRLLPDWNRGPHLTGYVDFADPMKDDPGRSHGPWASCSTCPPPRLSDCRKILEHCLESMTEKGVRAGTISSQQIFTTLNKWHGLSTALRQVLQSKWRASGRASPAALWDRAVLAMSGQCTAAEVGRILGYGEKEKNDLSFEEASYMKESVVALKLAKKVIEFQQGWRANAISHMNHTGVFSRTLTHSCTDWPCLLLELLSQAAEIDHFQPKLVINNIEVLKQATVNNKLSVSGPLYHDSLIWRMIALGANERCLPVILVTSDSYYSYEAFLEFGYKEIFISRETFGWTPQEAKMHMVTDYFSLSEWKVIAEVLGPNPRHLFELYALKQSNYPPLRTEDKASSTFEDIVDAYIAYLQITVVNPAMDRALEFLQKFAIDVHNGKISEDRLRFGAAWRHPPQIDDPKLHKQWAKLQLIDFVQSLANTEFAVNYRSDYSEEIFDDPSTIAMLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL82</accession>
    <name>V7AL82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G012600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL82"/>
    <dbReference type="STRING" id="3885.V7AL82"/>
    <dbReference type="Gramene" id="ESW06015">
        <property type="protein sequence ID" value="ESW06015"/>
        <property type="gene ID" value="PHAVU_010G012600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQYR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGQCNHH"/>
    <dbReference type="OrthoDB" id="758104at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044257">
        <property type="entry name" value="TRM32-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47071:SF3">
        <property type="entry name" value="DUF4378 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47071">
        <property type="entry name" value="PROTEIN TRM32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4378" evidence="1">
        <location>
            <begin position="304"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="465" mass="52417" checksum="FB341E6A84CEBBA5" modified="2014-02-19" version="1">MDAIVHKLPQGHGMPNDLKKEFVKKLTDSNMIRCNESGPFTPSFAKHPSNSISRKLSLQEPLEVYFGSHESGFNPEPSHVQSKKLKLRTEKGHSPLKLMIRLRRMLSLPDLQSFSYGFQNGEFPDISSVTEPKPRVASGDGTLSSENIVHQKKKLDLHLHSKTQLQLDTPVENLIQKHLGSVDENDLLISNIVEQGSDCSKVGIMTTDDFGHSSFKSGDTFNDQEMIEPIKQSMAAIEESVNPKLITEPDNGLENIMEQQEAIMDFLKVKDSTENAQKVEIQSKQLMNYDILPVSHIPTRDKAEFNYVKYVLEICGLTGKECLSAWHSSNHPVDPLLYEEMESDLDFCSYGGSGQCNHHVLFDLINESLLELSGRSFCYCSIPLSPSHPMPKGFHNLHQVWTHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPQIFAQCVSLELEELILQDLVEEMSSDLACI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALG0</accession>
    <name>V7ALG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G047300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALG0"/>
    <dbReference type="SMR" id="V7ALG0"/>
    <dbReference type="STRING" id="3885.V7ALG0"/>
    <dbReference type="Gramene" id="ESW06432">
        <property type="protein sequence ID" value="ESW06432"/>
        <property type="gene ID" value="PHAVU_010G047300g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1418158at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050907">
        <property type="entry name" value="SRSF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23147">
        <property type="entry name" value="SERINE/ARGININE RICH SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="3" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="RRM" evidence="6">
        <location>
            <begin position="4"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="707"/>
            <end position="732"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="707"/>
            <end position="716"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW06432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="732" mass="79901" checksum="E30BE0654B2938CF" modified="2014-02-19" version="1">MAEVKFFFTNFPHEYAERDMWKIFQRWGRVADVFILRRLNSGNRRFGFVSFQGVVDAHALERRLDAIWIGLWKLRVNLPKFRRKETLKPEVGGRRKHEQVRKTWRQKNQQRTFAQVVRDGDESASKKVQNASMDCFQVVVESTKWLEECFVGRLIELKNVMSIKESFMLCGFNSVKLRSLGEKFVLLSCDELGVLEKIVAGNKDLLDGIFESLVPWDASSVVDEKFVWVRCRCFETIGSLVGSLVEIDEATITREVVEFARLRVRIPIGSVEKLVKQVQINGKLCNVSFEEELEVPVAMQRLLDRQWGVVCEEESKASLVEFGGVGSVNSLDSELGEGLLDGEGGACKYNHCGKSQSMLGEVGAMCNSGVNLSNLDYDFSYFGNPIVFSKKLEESIKVSGAQSGGCAEKNIGLNDALISQEKEWFDDLICVGPILAQERHASRVGTESAVAAAATCVVTEELASVEAMRSAVVGGKEASRPIVVGGEEVSRPALVGCGSGGWSACLNGRLSPSDRGVRGAALSSGGVLYVDLSAAAGGSLVSTPSSAIGANSIDEVGRLGWSGDIGGCEGASMVNGREDEVGQQFSSAVADGRRSLNGSENKVSNPSYSINGVTRQMDGSFVSREFNCVPLVNFRGTGSQPRALLDVNVSRESYVPLSRSIDSAVQYGSRLNRLKNDNFEAARMWSIGKELGFSFIGDEEIVISKLKSSENRDSGKQKVVGKESSVSDDEGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALL5</accession>
    <name>V7ALL5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G206100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALL5"/>
    <dbReference type="MEROPS" id="A01.A48"/>
    <dbReference type="Gramene" id="ESW05743">
        <property type="protein sequence ID" value="ESW05743"/>
        <property type="gene ID" value="PHAVU_011G206100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCGARAC"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000022">
        <property type="entry name" value="Aspartyl protease AED3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000040">
        <property type="entry name" value="aspartyl protease AED3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF798">
        <property type="entry name" value="ASPARTYL PROTEASE AED3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753875" description="Peptidase A1 domain-containing protein" evidence="9">
        <location>
            <begin position="24"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="10">
        <location>
            <begin position="99"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW05743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="47274" checksum="9DAC238AAC29B6A7" modified="2014-02-19" version="1">MTMKTSPILTPLVLFLLFSLAKGQNPKCDVHDHGSTLKVFHVFSPCSPFRPSQGMSWEESVLQLQAKDQDRMQYLSNLVARRSIVPIASGREITQSPTYIVKAKIGTPAQTLLLAMDTSNDAAWLPCTSCLGCSTLKPFAPAKSTTFKTLPCSAPQCKQVPNPTCGGSACAFNFTYGTSSVAATLVKDTVTLATDPVPGYTFGCVQKATGSSIPTQGLLGLGRGPLSLLAQTQNLYRSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAVRVGRRIVDIPPEALAFNPTTGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVTVGKKLTVTRLGGFDTCYTVPIVAPTITFMFSGMNVTLPPDNTLIHSTAGSVTCLAMAAAPDNVNSVLNVIANMQQQNHRVLYDVPNSRLGVARELCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALL6</accession>
    <name>V7ALL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="11">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_011G147000g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="11"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALL6"/>
    <dbReference type="SMR" id="V7ALL6"/>
    <dbReference type="Gramene" id="ESW05041">
        <property type="protein sequence ID" value="ESW05041"/>
        <property type="gene ID" value="PHAVU_011G147000g"/>
    </dbReference>
    <dbReference type="OMA" id="YMMKGTQ"/>
    <dbReference type="OrthoDB" id="785331at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000001">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32444">
        <property type="entry name" value="BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32444:SF234">
        <property type="entry name" value="RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00473">
        <property type="entry name" value="PAN_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 11 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 11" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3 14" id="KW-0732">Signal</keyword>
    <keyword evidence="2 11" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753365" description="Receptor-like serine/threonine-protein kinase" evidence="14">
        <location>
            <begin position="25"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="16">
        <location>
            <begin position="25"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="17">
        <location>
            <begin position="339"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="515"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="425"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="542"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW05041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="830" mass="92932" checksum="BD91360BE8DCD235" modified="2014-02-19" version="1">MGIILTFSIIFACILVFSLEISVANDSINVLQSLSDGKTLVSEGGKFELGFFSPGSSQKRYLGIWYKNIPDKTFVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHTSSQKQAQNPVVEMLDSGNLVVRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGFERKYTAWKSPDDPSPGDVSRVMKLYSYPEIYMMKGTQKLLRYGPWNGEYFSGMPDLLNNTIFDLSYVSNEDEIYYTYTLVNDSVLSRTVTNQSATIDRYVWQEVEKIWKIYRSYPKEFCDKYDSCGPNGLCVRTQSQSCTCLEGFSPKSQQNWISSDWSGGCVRNKALNCSHDVFVKYEGLKVPATTNTLLNKSLGLKECEVKCLNNCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQFETGGQDLYIRMNASEAVNSNSQEPVPSKEPVPSKEPGNNNNNRRTIVASTVAAVSGFLILLITCIICRLHRNNAGNSSTEDNNNKRHVDDLDVQMYDLVTIVKATNNFSTENIIGEGGFGRVYKGIIDSQEIAVKTLSRNSWQGVTEFINEVNLTAKLQHRNLVKLLGCCIEGEERMLIYQYMENGSLDSLIFGDKSSKLLEWPQRFQIILGVSRGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQLEGSTSKVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIICGKRNRGLYQQTRVLNLVAHSWTLWKAGKGIDLIASNMKMSSCVISEVLRCLHVGLLCVQQYPDDRPTMMSVILMLESHIELAEPKEPAFISRIVLLEEDLYPKDTSSTNEVTVTILEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ29</accession>
    <name>V7AQ29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Ureide permease 1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G069400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant ureide permease (TC 2.A.7.19) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ29"/>
    <dbReference type="STRING" id="3885.V7AQ29"/>
    <dbReference type="Gramene" id="ESW06698">
        <property type="protein sequence ID" value="ESW06698"/>
        <property type="gene ID" value="PHAVU_010G069400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUAA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HETYEDS"/>
    <dbReference type="OrthoDB" id="1910534at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005274">
        <property type="term" value="F:allantoin:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015505">
        <property type="term" value="F:uracil:monoatomic cation symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030189">
        <property type="entry name" value="UPS_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009834">
        <property type="entry name" value="Ureide_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31081:SF5">
        <property type="entry name" value="UREIDE PERMEASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31081">
        <property type="entry name" value="UREIDE PERMEASE 1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07168">
        <property type="entry name" value="Ureide_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="108"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="132"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="258"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="299"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="344"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="369"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="402"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="434" mass="46798" checksum="42B852C0F390526D" modified="2014-02-19" version="1">MDSKEFSGICSLVPSLSESSLCTTGLKMYLVESKGGAIACMFLALFFLGTWPALLTMLERRGRLPQHTYLDYSITNFFAALLIAFTFGEIGKGKPDEPNFLAQLAQNNWPSVLFAMGGGVVLSLGNLSSQYAFAFVGLSVTEVITASITVVIGTTLNYFLDDKINKAEILFPGVGCFLIAVFLGSAVHSSNASDNKAKLNNYSSDYKEAAISSKERDLVKSKDLESGSSSADNVEAGTAVFLLELEERRAIKVSGKSTLIGLALTFSAGLCFSMFSPAFNLATNDQWHTLEKGIPHLTVYTAFFYFSISCFVIAIVLNITFLYRPVLNLPKSSLKAYLADSDGRIWALLAGLLCGVGNGLQFMSGQAAGYAAADAVQALPLVSTFWGVVLFGEYRRSSRRTYILLGSMLFMFIVAVGVLMASSGHRSSSHTAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQC4</accession>
    <name>V7AQC4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G045800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQC4"/>
    <dbReference type="SMR" id="V7AQC4"/>
    <dbReference type="Gramene" id="ESW06411">
        <property type="protein sequence ID" value="ESW06411"/>
        <property type="gene ID" value="PHAVU_010G045800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYAQTHC"/>
    <dbReference type="OrthoDB" id="1871818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001822">
        <property type="entry name" value="Pentatricopeptide repeat-containing family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000090">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF490">
        <property type="entry name" value="REPEAT-LIKE SUPERFAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="375"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="464"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="654"/>
            <end position="746"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="746" mass="84499" checksum="2E26459F270506CB" modified="2014-02-19" version="1">MVTTNSYLFSAPSSLLPISIHKFPNSSKHHSPTLAFTQLKPKPKPNVSSIKQHINLNETQQLQGHFMKTNFNLSCRLPFAALEYYSSNAAIHSFLITSYIKNNCPADAAKMYAYMRRTDTEVDNFIIPSDKSCSFVMKNRFHGDVFVCNALIMMYGEVGSLTSTRLLFDKIENKDSTMIRSYDRGGLFNEALNLFSDMLVMGMRPSEIAMINITHVLAEFADLKMGKVVLGYVIRNVKYGKSGAFLSPGLIDMYVKCGNLACATRLFDGLYEASIISWTAMIASNIYCYNLNEGVRLFIKMLGEGMFRNEITILSLVKECGTVGALELGKWVHAFTLRSGFTMSLVLATAFIDMYGKYGDARIARSIFSNFKSKDFMMWSAMISAYARNNCIDEAFDIFITMVSLLRICAKDGSLEKGKWIHSYIDNQGIQEDMILRTSLVNMYAKCGDIDVAHRLFDAAMDREISMWNAMISGFAMHGHGEVAFKLFEEMEALGVVPNDITFIGALYACSHPGLLNEGRRLFHKMVHEFGVVPKVEHYGCMVDLLGRAGMLDEVNELIKNMPMRPNMVVFGSLLSACKLHKNLKLEEWTTKQFLSLEHYKSMKDKGIVKVTGVSSIEVNESLHEFTIGDRDHPDAEKIYEMIDEMREKLEDVGYIPYVSCVLMNLDNEEKETALNYHNEKLVMAYGLINTAPGVPIRIVKNLRICDDCHNATKLLSKMYGWEIIMRDQNRFHHFQEGSCSCCDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARJ6</accession>
    <name>V7ARJ6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G025400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARJ6"/>
    <dbReference type="SMR" id="V7ARJ6"/>
    <dbReference type="Gramene" id="ESW08179">
        <property type="protein sequence ID" value="ESW08179"/>
        <property type="gene ID" value="PHAVU_009G025400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSW7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MWPMFAS"/>
    <dbReference type="OrthoDB" id="608866at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46993">
        <property type="entry name" value="MYB TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46993:SF6">
        <property type="entry name" value="MYB TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="5">
        <location>
            <begin position="356"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="4">
        <location>
            <begin position="356"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="258"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="286"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW08179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="416" mass="47178" checksum="ACCD9284AEE311D3" modified="2014-02-19" version="1">MEGEDDIGRWVLEFLLRNPPALAGNNLIKNVFRRISVSDANSLIKKTILLRSLRDHLSTLSINDSLLNTLEHLEELLRRDASPVTATMTAAYCAVAVDCTLKFLQVNLHHHNSAYLRAVNRIWRARVPRMNGSDSREGSLLFSAELERWSSDFEASLSDSQVRERLASIDARKDSIMKLEAFLAEAWADLGPSFLQLAASLHASRAPQHQEGEIQMCSSAAAENLHLTTTNEVEKVGDCISGELQMLAKDSLLNSFEGNEEAPTEKQSGEADVSCSHDINNNEADPMEKDRTSIPQNCDRRPSLMEKNITARVYEWDDSIDDVDGGTSNYASRFNLPTPKRRTLSPLKMYKPARITKRRKVNKWSQLEEETLRTAVEKFGRGNWKLILNSHKDIFEERTEVDLKDKWRNMTRYGCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT03</accession>
    <name>V7AT03_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G066500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT03"/>
    <dbReference type="STRING" id="3885.V7AT03"/>
    <dbReference type="Gramene" id="ESW08694">
        <property type="protein sequence ID" value="ESW08694"/>
        <property type="gene ID" value="PHAVU_009G066500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT1Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTIILES"/>
    <dbReference type="OrthoDB" id="1862401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051283">
        <property type="entry name" value="Sec_Metabolite_Acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896">
        <property type="entry name" value="FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896:SF12">
        <property type="entry name" value="HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="116" mass="13383" checksum="669AA1377F92468E" modified="2014-02-19" version="1">MMDTPILQRVSECFIKAKHSTQKSNQICHLTPWDIAMLSAHYIQKGLLYKKPEPLVNQHDFIENLLEKLKHSLSLTLSHFYPLSGRLVTHKTKDPPFYAVFVDCTIILESNSSMQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUB1</accession>
    <name>V7AUB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">60S ribosomal protein L18a</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G024800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUB1"/>
    <dbReference type="SMR" id="V7AUB1"/>
    <dbReference type="STRING" id="3885.V7AUB1"/>
    <dbReference type="Gramene" id="ESW08173">
        <property type="protein sequence ID" value="ESW08173"/>
        <property type="gene ID" value="PHAVU_009G024800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0829">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MGAWHHA"/>
    <dbReference type="OrthoDB" id="1900695at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.10:FF:000001">
        <property type="entry name" value="60S ribosomal protein L18a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.10:FF:000002">
        <property type="entry name" value="60S ribosomal protein L18a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00273">
        <property type="entry name" value="Ribosomal_eL20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028877">
        <property type="entry name" value="Ribosomal_eL20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023573">
        <property type="entry name" value="Ribosomal_eL20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021138">
        <property type="entry name" value="Ribosomal_eL20_eukaryotes"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10052">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L18A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01775">
        <property type="entry name" value="Ribosomal_L18A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002190">
        <property type="entry name" value="Ribosomal_L18a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160374">
        <property type="entry name" value="RplX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein eL20" evidence="5">
        <location>
            <begin position="7"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW08173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="178" mass="21394" checksum="51E2A2EEC4A207E6" modified="2014-02-19" version="1">MVSFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIQNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEHMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKIRPPSRKLKTTYKAKKPNLFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYP2</accession>
    <name>V7AYP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein EARLY FLOWERING 4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G228400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EARLY FLOWERING 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYP2"/>
    <dbReference type="STRING" id="3885.V7AYP2"/>
    <dbReference type="Gramene" id="ESW10667">
        <property type="protein sequence ID" value="ESW10667"/>
        <property type="gene ID" value="PHAVU_009G228400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10668">
        <property type="protein sequence ID" value="ESW10668"/>
        <property type="gene ID" value="PHAVU_009G228400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10669">
        <property type="protein sequence ID" value="ESW10669"/>
        <property type="gene ID" value="PHAVU_009G228400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ6B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMQTFQK"/>
    <dbReference type="OrthoDB" id="1895690at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009649">
        <property type="term" value="P:entrainment of circadian clock"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042753">
        <property type="term" value="P:positive regulation of circadian rhythm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048511">
        <property type="term" value="P:rhythmic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040462">
        <property type="entry name" value="EARLY_FLOWERING_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009741">
        <property type="entry name" value="EARLY_FLOWERING_4_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33469">
        <property type="entry name" value="PROTEIN ELF4-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33469:SF16">
        <property type="entry name" value="PROTEIN ELF4-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07011">
        <property type="entry name" value="Elf4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0090">Biological rhythms</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein EARLY FLOWERING 4" evidence="6">
        <location>
            <begin position="14"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW10669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="114" mass="12723" checksum="597D93955E69110A" modified="2014-02-19" version="1">MEGDTFSGLGDGAQIDAKIMQTFHKSFVQVQTIFDQNRLLINEINQNHESKVPDNLTRNVGLIRELNNNIRRVYDLYADLSSSFTKSMEVTSEGDSSGGVKSDGKAGHKRHRPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZC0</accession>
    <name>V7AZC0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">3-ketoacyl-CoA synthase</fullName>
            <ecNumber evidence="10">2.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G257100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a very-long-chain acyl-CoA + malonyl-CoA + H(+) = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:32727"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:90725"/>
            <dbReference type="ChEBI" id="CHEBI:90736"/>
            <dbReference type="EC" id="2.3.1.199"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZC0"/>
    <dbReference type="SMR" id="V7AZC0"/>
    <dbReference type="STRING" id="3885.V7AZC0"/>
    <dbReference type="Gramene" id="ESW11002">
        <property type="protein sequence ID" value="ESW11002"/>
        <property type="gene ID" value="PHAVU_009G257100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPKZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAGSIDQ"/>
    <dbReference type="OrthoDB" id="329835at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000028">
        <property type="entry name" value="3-ketoacyl-CoA synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036417">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="FAE" evidence="13">
        <location>
            <begin position="108"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="14">
        <location>
            <begin position="412"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="328"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="413"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="417"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="446"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR036417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR036417-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW11002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="525" mass="58575" checksum="509BEF49DF37DB3E" modified="2014-02-19" version="1">MGGDTIDMDKERLTAEMNFKDSSSAVIRIRRRLPDFLQSVKIKYVKLGLGYGYSCNAASIVMLAITLSLSFSLTGLKLSKLCSHQLDAETVAAAFAAILSLAALFRWKRSGAVYLVDFACYKPEKERKISVESFLKMTEESGGFEEESLQFQRKISTRAGLGDETYLPRGITSRPPNLCMSEARLEAEEVMFGALDALFAKTGVEPKDIDILVVNCSLFNPTPSLSAMIVNHYKLRSNIKSYNLGGMGCSAGLISVDLAKDLLKANPNSYALVLSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKPSDRSRSKYQLLHTVRTHKGADDKNYNCVYQKEDDTGKIGVCLARELMAVAGDALKTNITTLGPMVLPYSEQLMFFLSLVRRKVLKMSGVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSEWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVAKGDRVWQIAFGSGFKCNSAVWKAVRDIPELTEWRGNPWDDSIHNYPLHLNLPTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2E1</accession>
    <name>V7B2E1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF7642 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G224600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2E1"/>
    <dbReference type="STRING" id="3885.V7B2E1"/>
    <dbReference type="Gramene" id="ESW10621">
        <property type="protein sequence ID" value="ESW10621"/>
        <property type="gene ID" value="PHAVU_009G224600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUD7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGAGLIM"/>
    <dbReference type="OrthoDB" id="1930353at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056059">
        <property type="entry name" value="DUF7642"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35410">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35410:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24649">
        <property type="entry name" value="DUF7642"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7642" evidence="2">
        <location>
            <begin position="79"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF24649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="251" mass="28809" checksum="DF988EFF4315A3E7" modified="2014-02-19" version="1">MGTTEEVVEIERLEKSLLEENERDAEAVLYAASFREMEQSFVKYQTLQWVLYSVLLILAWGIGFLMLLYLPVRRFILRKDIRSRTLYLTPNAIVYKVTRPVPFPCFGVLKKEKHVLLHSVADVVVEQGYLQSLFGVYSLRIENVGVRRPPSDDVKIQGVANPNAFRKAVMMRLSNMRNEVMSRQVSTFEDVPHHLMMSPSKSLKHDSKPSGEQLLMQKLEEVGSSVKRIQYLFEEQQSQTTESIDGGALIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3X4</accession>
    <name>V7B3X4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Beta-glucosidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G097200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3X4"/>
    <dbReference type="SMR" id="V7B3X4"/>
    <dbReference type="STRING" id="3885.V7B3X4"/>
    <dbReference type="Gramene" id="ESW12255">
        <property type="protein sequence ID" value="ESW12255"/>
        <property type="gene ID" value="PHAVU_008G097200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DDSHLMP"/>
    <dbReference type="OrthoDB" id="65569at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000069">
        <property type="entry name" value="Beta-glucosidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="GH_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF208">
        <property type="entry name" value="GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754045" description="Beta-glucosidase" evidence="7">
        <location>
            <begin position="25"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="501"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="527" mass="59857" checksum="CA59C4DA68CE925F" modified="2014-02-19" version="1">MDLILKVFAVIELVLLMVHPSAHALSRDEFPPDFVFGASASAYQVEGAANEDGRKPSIWDTFSHSGNGDMYDGDGDVACDQYHKYKEDVQLMANMGLEAYRFSISWSRLIPGRGQVNPKGLQYYNNFINELISHGIEAHVTLNHWDLPQALEDEYGGWVSRRVVKDFTAYADVCFREFGDRVRYWTTLNEGNVHAAFGYDVGLLPPQRCSFPIANCSRGNSSTEPYLVGHHMLLAHASAARVYRKKYQGLQRGLIGFNLLAFGLLPRTNSTEDVNATQRFQDFFIGWFMNPFTFGDYPDIMKKNAGSRLPSFTQKESNLVRGSIDFVGINFYYSFYVSNSPSSLLMHNRDYLADISAEIERMYTNDSSTNVVPITPGVFLGFLDSLRDAYGNVPIYIHENGQETPHNSSLDDWPRVNYLDAYIRSLVVALRSELNVKGYFVWSFLDAFELLVGYESSYGLYYVDRNDPNLRRQPKLSAEWYSNFLKGKLMDTKITKETEKNASVLSHNPSLHSATQTNQNTFEIQSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B461</accession>
    <name>V7B461_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Hexosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G132200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1 5">Glycan metabolism; pectin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Golgi apparatus membrane</location>
            <topology evidence="5">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glycosyltransferase 8 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B461"/>
    <dbReference type="SMR" id="V7B461"/>
    <dbReference type="STRING" id="3885.V7B461"/>
    <dbReference type="Gramene" id="ESW12667">
        <property type="protein sequence ID" value="ESW12667"/>
        <property type="gene ID" value="PHAVU_008G132200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS2Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QADDHRN"/>
    <dbReference type="OrthoDB" id="411524at2759"/>
    <dbReference type="PhylomeDB" id="V7B461"/>
    <dbReference type="UniPathway" id="UPA00845"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047262">
        <property type="term" value="F:polygalacturonate 4-alpha-galacturonosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045489">
        <property type="term" value="P:pectin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06429">
        <property type="entry name" value="GT8_like_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029993">
        <property type="entry name" value="GAUT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32116">
        <property type="entry name" value="GALACTURONOSYLTRANSFERASE 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32116:SF31">
        <property type="entry name" value="GALACTURONOSYLTRANSFERASE 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW12667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="556" mass="64125" checksum="2B466EF61D835286" modified="2014-02-19" version="1">MANPRFPRSRIPTFTLFTSAMSLALCTFFLLSFLFTTHSYSSHQHHFTGSEGGIADGFESIRRSILALKTDPLKPRLDQIRKQSDDHRSLALVYASYARKLKLESSKLVRIFAELSVNFSDLMKKPQYRTLFSSDASPVDESVVRQLEKEVKERIKTTRQVIGDAKESFDNQLKIQKLKDTIFSVNEQLTKAKKQGAFSSLIAAKSIPKSLHCLSMRLMEERIAHPEKYTTEGKPTPPEVEDPSLYHYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVKAVEDYKFLNSSYVPVLKQLESANLQRFYFENKLENATKDTNNMKFRNPKYLSILNHLRFYLPEMYPKLHKILFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKAKFSPKACAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKPWLDIAMAQFKPLWTKYVDYELDFVQACNFGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4M2</accession>
    <name>V7B4M2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G147200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4M2"/>
    <dbReference type="SMR" id="V7B4M2"/>
    <dbReference type="STRING" id="3885.V7B4M2"/>
    <dbReference type="Gramene" id="ESW12847">
        <property type="protein sequence ID" value="ESW12847"/>
        <property type="gene ID" value="PHAVU_008G147200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZRT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIGEIQW"/>
    <dbReference type="OrthoDB" id="428577at2759"/>
    <dbReference type="PhylomeDB" id="V7B4M2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47376">
        <property type="entry name" value="OS02G0597700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="1">
        <location>
            <begin position="61"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="150" mass="16933" checksum="9AB1E732BF86DE44" modified="2014-02-19" version="1">MIKLRLMRFSRISSKLGNGNKATPPREKDCRGTAEIQWELRPGGMLVQKRESNISAGEGFITITVSTVSQSHEISIEATSTFGELKMILSVVTSFEPREQRLLFKGKERDDDEYLHMVGVREKDKVVLLEDPAIKEKKMIITNPTPTITV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6W1</accession>
    <name>V7B6W1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cytochrome C biogenesis protein transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G207500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6W1"/>
    <dbReference type="STRING" id="3885.V7B6W1"/>
    <dbReference type="Gramene" id="ESW13569">
        <property type="protein sequence ID" value="ESW13569"/>
        <property type="gene ID" value="PHAVU_008G207500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQT0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQWVERY"/>
    <dbReference type="OrthoDB" id="1902618at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36394">
        <property type="entry name" value="OS01G0277700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36394:SF1">
        <property type="entry name" value="OS01G0277700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="158" mass="17027" checksum="F33D5DFD04391A61" modified="2014-02-19" version="1">MANTIAGEETVHKVASLLLVFLGGSYILLFLMGKGGHSHSHNQPMEKMAVAGLILVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCLVGVLTLLFHDHDHGDVISIGDQHSHRKIISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8T7</accession>
    <name>V7B8T7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G262700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8T7"/>
    <dbReference type="SMR" id="V7B8T7"/>
    <dbReference type="Gramene" id="ESW14219">
        <property type="protein sequence ID" value="ESW14219"/>
        <property type="gene ID" value="PHAVU_008G262700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWCEMAK"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000010">
        <property type="entry name" value="Transcriptional activator Myb isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050560">
        <property type="entry name" value="MYB_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614">
        <property type="entry name" value="MYB PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614:SF218">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB119-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13921">
        <property type="entry name" value="Myb_DNA-bind_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="104"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="104"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="151"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="155"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW14219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="369" mass="42783" checksum="82F909B8FC7EA8FC" modified="2014-02-19" version="1">MSIGESHGGNGFQIYGCDVMNPAFTSTDTNEFLCAHFLHQKQQQQARNSDDCAFSEGAFSEEAFKWTNINHNLTLCLEDMQVSCKNTKVVGRRRKKQSSVSWIKGQWNKEEDRKLIRLVKQHGDRKWAEIAENLEGRVGKQCRERWNNHLRPDIKKDSWSEEEERILVEMHASLGNRWCEMAKRLAGRSENAIKNHWNATKRRLNSKRKHKKTKNGKPHSSILEDYIRSKTLITTNPTPLIITAPQENAPNPLNHVFHEPFANDLLFMQQICMENVDASKHPKMSPTSYLDCWNMNVDDMDESEFLYSQQFSDNMQLNDSLFPRETHAHPPGNYLPSDLYVSPFGYGNQNLNIDFRHQGCSQVKGEDIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8Z4</accession>
    <name>V7B8Z4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AP complex mu/sigma subunit domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G154900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adaptor complexes small subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8Z4"/>
    <dbReference type="STRING" id="3885.V7B8Z4"/>
    <dbReference type="Gramene" id="ESW12946">
        <property type="protein sequence ID" value="ESW12946"/>
        <property type="gene ID" value="PHAVU_008G154900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12947">
        <property type="protein sequence ID" value="ESW12947"/>
        <property type="gene ID" value="PHAVU_008G154900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0934">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="371463at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016635">
        <property type="entry name" value="AP_complex_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022775">
        <property type="entry name" value="AP_mu_sigma_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11753">
        <property type="entry name" value="ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01217">
        <property type="entry name" value="Clat_adaptor_s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AP complex mu/sigma subunit" evidence="6">
        <location>
            <begin position="39"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="89" mass="10530" checksum="31B832396DA2B4C4" modified="2014-02-19" version="1">MLFIPANHFDPHFFSFEILSFENMEPSHKSLTLLITILEERQALEGEIVCKCLARNEQQCSFIEHRNYKIVYKRYASLFFLVGVDDDEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAG8</accession>
    <name>V7BAG8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine/threonine protein phosphatase 2A regulatory subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G024500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphatase 2A regulatory subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAG8"/>
    <dbReference type="SMR" id="V7BAG8"/>
    <dbReference type="STRING" id="3885.V7BAG8"/>
    <dbReference type="Gramene" id="ESW14872">
        <property type="protein sequence ID" value="ESW14872"/>
        <property type="gene ID" value="PHAVU_007G024500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2085">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLAHKKC"/>
    <dbReference type="OrthoDB" id="10264446at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000159">
        <property type="term" value="C:protein phosphatase type 2A complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019888">
        <property type="term" value="F:protein phosphatase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000331">
        <property type="entry name" value="Phosphoprotein phosphatase, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002554">
        <property type="entry name" value="PP2A_B56"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257:SF75">
        <property type="entry name" value="SERINE_THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01603">
        <property type="entry name" value="B56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028043">
        <property type="entry name" value="PP2A_B56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR028043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW14872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="481" mass="56060" checksum="A79489DD37C6EB1E" modified="2014-02-19" version="1">MFNKIIKLAHKKCSKLEFPESGLQFYEVVVKHASRTTPSAAANSDSENPPFLVPPSDPTVIEPLPPLRDAEESERRALILRKIQGCCFLCDFSDTVDSVNERETKRQALEELIEIIQSGSFGFSENQEDLINMVSVNIFRCFPASPRGTEYLEPDEDDRHLDPSWPHLQLVYDILLRYVVSPETDIRTSKRYIDHVFVMKLIDLFDSEDMREREYLKTILHRIYGKYMVHRPFIRNAINNVFYRFIFETQRHNGIFELLEILASIINGFALPMKEEHKLFLIRTLIPLHKPKAISSYHEQLSYCVVQFVQKDNRLADPVIKGMLKYWPVSNCQKEVLFLGELEVVLEATQCTDSLRCLASLFRQIGRCLNSPHFQVAERALYFWNNENIMSLVAQNRNVILPVIFEALENNMKGHWSRAVIGLTANVRKMFLEMDTELFEECERQYTEKEAKTRELEAKRLLTWKRLDAEAAQAVREDMVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAR9</accession>
    <name>V7BAR9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G028700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAR9"/>
    <dbReference type="SMR" id="V7BAR9"/>
    <dbReference type="STRING" id="3885.V7BAR9"/>
    <dbReference type="Gramene" id="ESW14919">
        <property type="protein sequence ID" value="ESW14919"/>
        <property type="gene ID" value="PHAVU_007G028700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FPQFDFQ"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="PhylomeDB" id="V7BAR9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000011">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000107">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044676">
        <property type="entry name" value="EOBI/EOBII-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001345">
        <property type="entry name" value="PG/BPGM_mutase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45675">
        <property type="entry name" value="MYB TRANSCRIPTION FACTOR-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45675:SF30">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB62"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00175">
        <property type="entry name" value="PG_MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="15"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="15"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="68"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="68"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="152"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="305" mass="34936" checksum="C2D585CC7D453077" modified="2014-02-19" version="1">MSTIAKRDLSSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNNSPSPHSSMTSMMNLGNSGEASMSSTSSSFNIPSMFSSSPPQREFIMDGANHFSTMSNPINPSPDSFPFSQLLEISEHPKSPPNVLENNVYSYPIQDNCYADTNNYGMEALNMDPLSAFGTYDFPQFDFQTAGNGWMLDSMEDTTLWNMDAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAY5</accession>
    <name>V7BAY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G039700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAY5"/>
    <dbReference type="Gramene" id="ESW15047">
        <property type="protein sequence ID" value="ESW15047"/>
        <property type="gene ID" value="PHAVU_007G039700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SYJD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGHNFNT"/>
    <dbReference type="OrthoDB" id="1397945at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045087">
        <property type="term" value="P:innate immune response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050793">
        <property type="term" value="P:regulation of developmental process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044700">
        <property type="entry name" value="PIP2/PIPL1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34663">
        <property type="entry name" value="OS06G0637400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34663:SF8">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754334" description="Transmembrane protein" evidence="2">
        <location>
            <begin position="30"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW15047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="86" mass="9282" checksum="38FBE5D0D16234F9" modified="2014-02-19" version="1">MNTRIKSVSFLILVLLAFFCTSLLHVSESRPLPIYPPRKDGAVREVKGVFRTLKSSGPSPGIGHRLNKLENVGGMKNSGPSPGQGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCI0</accession>
    <name>V7BCI0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G000700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid beta-oxidation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCI0"/>
    <dbReference type="SMR" id="V7BCI0"/>
    <dbReference type="STRING" id="3885.V7BCI0"/>
    <dbReference type="Gramene" id="ESW14588">
        <property type="protein sequence ID" value="ESW14588"/>
        <property type="gene ID" value="PHAVU_007G000700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1681">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QYVAHVE"/>
    <dbReference type="OrthoDB" id="14970at2759"/>
    <dbReference type="PhylomeDB" id="V7BCI0"/>
    <dbReference type="UniPathway" id="UPA00659"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051750">
        <property type="term" value="F:delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06558">
        <property type="entry name" value="crotonase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.12.10:FF:000004">
        <property type="entry name" value="Delta3,5-delta2,4-dienoyl-CoA isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.226.10:FF:000024">
        <property type="entry name" value="Delta3,5-delta2,4-dienoyl-CoA isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.226.10">
        <property type="entry name" value="2-enoyl-CoA Hydratase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="entry name" value="Lyase 2-enoyl-coa Hydratase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045002">
        <property type="entry name" value="Ech1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004794">
        <property type="entry name" value="PRK06142.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43149:SF1">
        <property type="entry name" value="DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43149">
        <property type="entry name" value="ENOYL-COA HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="ClpP/crotonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="29316" checksum="3EDDAF0888629B6E" modified="2014-02-19" version="1">MEEKYKYPSLQIVEKTPKSGVWYVILNRPSRRNALSHDFFTHFPKALSALDHDPHVNVIVLSAAGNHFCSGIDLSILGSTASNSASGESLRRQIMAMQDAITALERCRKPVIASIHGACIGGGIDIVTACDIRMCTKEAVFSVKEVDLALAADLGSLQRLPLIVGFGNAMELALTGRTFSGEEAKELGLVSRVFDSKDDLDQAVMDLAQAIGSKSPLAVVGTKMVVLKSRDLTVDQGLDYVATLNSARLLSADLTEAVTAQKQKRKPVFSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDL1</accession>
    <name>V7BDL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G114400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDL1"/>
    <dbReference type="STRING" id="3885.V7BDL1"/>
    <dbReference type="Gramene" id="ESW15924">
        <property type="protein sequence ID" value="ESW15924"/>
        <property type="gene ID" value="PHAVU_007G114400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1337">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IATIPKQ"/>
    <dbReference type="OrthoDB" id="441812at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016279">
        <property type="term" value="F:protein-lysine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10527">
        <property type="entry name" value="SET_LSMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1420.10">
        <property type="entry name" value="Rubisco LSMT, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1410.10">
        <property type="entry name" value="set domain protein methyltransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036464">
        <property type="entry name" value="Rubisco_LSMT_subst-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050600">
        <property type="entry name" value="SETD3_SETD6_MTase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056924">
        <property type="entry name" value="SH3_Tf2-1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271:SF34">
        <property type="entry name" value="N-LYSINE METHYLTRANSFERASE SETD6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271">
        <property type="entry name" value="UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24626">
        <property type="entry name" value="SH3_Tf2-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SET" evidence="5">
        <location>
            <begin position="229"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="87"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="695"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="88"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="4">
        <location>
            <begin position="105"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="129"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="146"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="700"/>
            <end position="718"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="718" mass="80202" checksum="648783E1E49A61A7" modified="2014-02-19" version="1">MRAQADNHRTEYSFTVGEWVWLRLQPHRQHSVERRHSPKLAPRFSGPYKIARHIGHVAYELILPSSSHIHPVFHVSLLRQFKGVSQESSSTSSTNPTPLLNLPPFANPNNPPTAPLELPTPHTPPENAFTKTHVTWSPATAPLPTSPNLQNIPSIGDTLSNPNRGPMFQGGPIDNRALSNFEDKVESSNSKTLATSSATNISIPMASTASRRLRAFKRWMQSKGFQWSDALEFVDTPEEGIAVRALCQLKEGDVVAEMPKEACLTTKTSGAREIIEDAGLDGHLGLAFAIMYERSLGGDSPWYGYLQLLPYQECVPIVWTLDEVNELLCGTELHQTEQEDKALIYEDWKENILPLLDLAPLKLNPKFFDIEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMPSNYESGSDVDGSDNDKSIVKEEVAFDQIPSIDMTASIGANVGNCVGSDLDSSSVSEDDTSMLEMIMIKDVDSGTEVFNTYGLLGNAALLHRYGFTEPDNSYDIVNIDMELILQWCSSAFSDRHSRARVSLWKRLGYSACGSQESEYFEISFDGKPQIELLILLHIMLLLDDAYQKLDLSASVAGNCPESNGETTHLNGNMFPNEAFNMSKKSLLPKRVCDALLSIADMRESLYGLNSVEDDIEALERCSLTRERKLYHSLVLRINERKILQKLRNYASQPNKINKHSSPRKKLKRTTKKTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDP4</accession>
    <name>V7BDP4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exocyst subunit Exo70 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G000900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Component of the exocyst complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the EXO70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDP4"/>
    <dbReference type="SMR" id="V7BDP4"/>
    <dbReference type="STRING" id="3885.V7BDP4"/>
    <dbReference type="Gramene" id="ESW14591">
        <property type="protein sequence ID" value="ESW14591"/>
        <property type="gene ID" value="PHAVU_007G000900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2344">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENECCMV"/>
    <dbReference type="OrthoDB" id="1922221at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000145">
        <property type="term" value="C:exocyst"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005546">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.170">
        <property type="entry name" value="Exocyst complex component Exo70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004140">
        <property type="entry name" value="Exo70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046364">
        <property type="entry name" value="Exo70_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542:SF127">
        <property type="entry name" value="EXOCYST COMPLEX COMPONENT EXO70C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542">
        <property type="entry name" value="EXOCYST COMPLEX PROTEIN EXO70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03081">
        <property type="entry name" value="Exo70_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0268">Exocytosis</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Exocyst complex subunit Exo70 C-terminal" evidence="5">
        <location>
            <begin position="223"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU365026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW14591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="600" mass="68986" checksum="FEF37E8EB319E6A0" modified="2014-02-19" version="1">MEMSSSTKNEVEDAAAPADDVPALAKHLERMVDRYNSGRSKFVGEDEEAEEEDNSFLQFLDMVDRISTASSTSSTSSSTSSVFASHELDEIALVLEKAMSLLEKRLSSLLLHQDPKTKPPNKSLSFSSPSYLSAYPDTHSPRPPLHDHHIQDPFNFSPQKISTLNKIATAMIAAGYHIECYLAFANFRRTAFRTSLQTFGFGSTRMEDLYKMPWESLGPEIATWNQVVWHCTTVLFQSERRLYESIFPDHPSVSQNLFCDLARQVIIHLLNFAHGAVLTKWTTEKLFKFLDMYETLREEIVGGSFLESGAKELVYETDAAKDRIVEAIVAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEEVFEQGKRRNESEKCGEVEEGGDVEKEKNSGFAVQLMKIMELLDANVERKSALYKDEALRYFFMMNNGRYIVQKVKGCEELHELMGDNWCRRRQSGLRLYHKCYQRETWSKVVQCLKPEGLQVSGNKVSKQLVKERFKCFNRMFEEIHKCQSCWLVSDQQLQSELRVSVSALVIPAYRSFVGRFKQYLVSTRHIDKYIKYNPDDIELLIDDFFAGNSASMSRRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEM0</accession>
    <name>V7BEM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CSD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G028900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEM0"/>
    <dbReference type="STRING" id="3885.V7BEM0"/>
    <dbReference type="Gramene" id="ESW14921">
        <property type="protein sequence ID" value="ESW14921"/>
        <property type="gene ID" value="PHAVU_007G028900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3070">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="422005at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565">
        <property type="entry name" value="COLD SHOCK DOMAIN PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46565:SF20">
        <property type="entry name" value="COLD SHOCK DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="CSD" evidence="5">
        <location>
            <begin position="4"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW14921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="70" mass="8455" checksum="DB7DB3937A46BB3B" modified="2014-02-19" version="1">MNANMSEKVKWFNDQKGFWFIILDEVSRIFFVHQLQIKYDDFRSLAEAESVEFAIKFDSDRRTKMINITD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEX7</accession>
    <name>V7BEX7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G037400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEX7"/>
    <dbReference type="SMR" id="V7BEX7"/>
    <dbReference type="Gramene" id="ESW15021">
        <property type="protein sequence ID" value="ESW15021"/>
        <property type="gene ID" value="PHAVU_007G037400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0799">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWWIDPC"/>
    <dbReference type="OrthoDB" id="2019572at2759"/>
    <dbReference type="PhylomeDB" id="V7BEX7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015020">
        <property type="term" value="F:glucuronosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044610">
        <property type="entry name" value="GLCAT14A/B/C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003406">
        <property type="entry name" value="Glyco_trans_14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45719:SF14">
        <property type="entry name" value="BETA-GLUCURONOSYLTRANSFERASE GLCAT14A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45719">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02485">
        <property type="entry name" value="Branch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="44849" checksum="3A9AF7FEF6C88EEF" modified="2014-02-19" version="1">MGVDRKWLFTLFSAALLSLMVLLMSSFSAFSSPKAFPSLVQHGSRYPPAFAYFISGGHKDKDRILRLLLAVYHPRNRYLLHLGRDARDDERKALVAATRAVPAIRAFGNVDVVGKADYVTYLGSSNVAIALRAAAIMLKLDSGWNWFITLSALDYPLITQDDLSHVFSSVRRDLNFIDHTGDLGWKETDRFQPIVVDPGLYLARKSQIFQATEKRATPNAFKLFTGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYIVWDNPPKMEPLFLNASFYDQMVESGAAFARQFHLNNPVLDMIDEKILHRGSHRATPGMWCTGRRSWWVDPCSQWGDVNLVEPGPQAKNLEGSVANLLDGWNSQTNQCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFS1</accession>
    <name>V7BFS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Patatin</fullName>
            <ecNumber evidence="6">3.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G094300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Lipolytic acyl hydrolase (LAH).</text>
    </comment>
    <comment type="domain">
        <text evidence="6">The nitrogen atoms of the two glycine residues in the GGXR motif define the oxyanion hole, and stabilize the oxyanion that forms during the nucleophilic attack by the catalytic serine during substrate cleavage.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the patatin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFS1"/>
    <dbReference type="SMR" id="V7BFS1"/>
    <dbReference type="STRING" id="3885.V7BFS1"/>
    <dbReference type="Gramene" id="ESW15693">
        <property type="protein sequence ID" value="ESW15693"/>
        <property type="gene ID" value="PHAVU_007G094300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0513">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RSEMQEP"/>
    <dbReference type="OrthoDB" id="1658288at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07199">
        <property type="entry name" value="Pat17_PNPLA8_PNPLA9_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1090.10">
        <property type="entry name" value="Cytosolic phospholipase A2 catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32241">
        <property type="entry name" value="PATATIN-LIKE PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32241:SF3">
        <property type="entry name" value="PATATIN-LIKE PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="FabD/lysophospholipase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4 6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="7">
        <location>
            <begin position="77"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="5">
        <location>
            <begin position="81"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="5">
        <location>
            <begin position="273"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="458" mass="49618" checksum="19C23A9A2F21FCB7" modified="2014-02-19" version="1">MDCANELEMQEPSIETDKLSYEIFSILESKFLFGYDDPKLWFPKQIPPKPESETPPNVTAVDGVSSVKNQRGKICILAIDGGGMRGILAGKALAYLESALKKKSGDQNATIADYFDVAAGAGVGGIFTAMLFATKDHQRPIFAAEDTWRFLAEKGSKFYRTGGSGGFLKRLLSGGSGPVAAATAGLEKAVKEAFTAEQGGSLTLKDTIKPVLIPCYDLSSTAPFLFSRADALETDSFDFRLWEVCRATSAEPGLFEPVQMRSVDGQTKCLAVDGGLAMSNPTGAAITHVLHNKQEFPFVRGVEDLLVLSLGTGQLLEVSYDFDRVKRWKAKDWARPMARISGDGSSELVDQAVAMAFGHSRSTNYVRIQANGSSMGRCGPNVDTDSSPGNVKMLVGIAEEMLKQENVESVLFGGKRIGEHSNFEKLDWFAGELVQEHQRRSCRIAPTVAFKQATPKAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFU2</accession>
    <name>V7BFU2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G066600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFU2"/>
    <dbReference type="SMR" id="V7BFU2"/>
    <dbReference type="STRING" id="3885.V7BFU2"/>
    <dbReference type="Gramene" id="ESW15361">
        <property type="protein sequence ID" value="ESW15361"/>
        <property type="gene ID" value="PHAVU_007G066600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTU5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYVPKIK"/>
    <dbReference type="OrthoDB" id="1931703at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008839">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate reductase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000286">
        <property type="entry name" value="Dihydrodipicolinate reductase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.360.10:FF:000074">
        <property type="entry name" value="Dihydrodipicolinate reductase, C-terminus family protein, expressed"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022663">
        <property type="entry name" value="DapB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000846">
        <property type="entry name" value="DapB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023940">
        <property type="entry name" value="DHDPR_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00036">
        <property type="entry name" value="dapB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20836">
        <property type="entry name" value="DIHYDRODIPICOLINATE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20836:SF6">
        <property type="entry name" value="DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05173">
        <property type="entry name" value="DapB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01113">
        <property type="entry name" value="DapB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000161">
        <property type="entry name" value="DHPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55347">
        <property type="entry name" value="Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="7" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dihydrodipicolinate reductase N-terminal" evidence="8">
        <location>
            <begin position="39"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Dihydrodipicolinate reductase C-terminal" evidence="9">
        <location>
            <begin position="174"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF05173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW15361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="32174" checksum="C842C61014416411" modified="2014-02-19" version="1">MASLSCHFHTTNLLNSKNVNTRKKKRFISCSAQPTQSNIKVVINGATKEIGRAAVVAVTKARGMEVAGAVDTSHVGEDIGKVCGMEEPLEIPIINDLSLILGSISQSKATGVVVHFTDPSSVYDNVKQATAFGMKSIVYVPRIKLDTVAALSALCEKASMGVLVAPTLSIGSILLQQAAITASFHYSNVEIVESRANAKDLPSADANQIANNLSNIGQIYNREDPSTDVLARGQVLGDGIRVHSLVLPGLPSSTAVHFSGPGEVYCIKHDITDVQCLMPGLLLAIRKVVRLKNLVYGLEKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG15</accession>
    <name>V7BG15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G186700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG15"/>
    <dbReference type="SMR" id="V7BG15"/>
    <dbReference type="STRING" id="3885.V7BG15"/>
    <dbReference type="Gramene" id="ESW16814">
        <property type="protein sequence ID" value="ESW16814"/>
        <property type="gene ID" value="PHAVU_007G186700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IDPWTND"/>
    <dbReference type="OrthoDB" id="691673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd12203">
        <property type="entry name" value="GT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000061">
        <property type="entry name" value="Trihelix transcription factor GT-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000457">
        <property type="entry name" value="Trihelix transcription factor GTL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654">
        <property type="entry name" value="FI21293P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654:SF61">
        <property type="entry name" value="TRIHELIX TRANSCRIPTION FACTOR GTL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="98"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="426"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="179"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="340"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="375"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="529"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="185"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="195"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="553"/>
            <end position="568"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="587" mass="67152" checksum="459636949C8CADB6" modified="2014-02-19" version="1">MFDGVPEQFHQFITPRTSLPLHLPFPLHASGTPNTFSSNFDPYSPSHQLPLQPNSLLHPLHHPPSTHKDEAKAENTTIPMNFQIQRDQRQQLPQLIDPWTNDEVLALLRIRSSTESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNNNNYRFLSELEQLYHQGGGDHLGTGQKTQQLQKQDKMDHHPLEEGDSGKVESSVTKQNHDAVVAKSQGRKRKRPGRFEMFKGFCESIVHKMMAQQEEMHNKLLEDMMTRDEEKFTREEAWKKQEMEKMNKELEMMAREQAIAGDRQTNIIQILNKFSLTSSSNKTLKVVTNGSNLKTHITQNPNPSQNIPPIPTTQNPTSTLAQDTLQVITNPSTSSTSAQAPQTNPSSSSLNSQNNINPVERNSVLNKSLSSNVAEKDDVGRRWPKDEVLALINLRCTSVSNSNTNEEKEGNNKVPLWERISQGMSELGYRRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNEGKLVLQSERPESHMNNPPENLEQVEPDQTQAESSSQVGSGGFSVQQQVDHGGEKTLMQVPSLDFDQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG46</accession>
    <name>V7BG46_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G073400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG46"/>
    <dbReference type="SMR" id="V7BG46"/>
    <dbReference type="Gramene" id="ESW15451">
        <property type="protein sequence ID" value="ESW15451"/>
        <property type="gene ID" value="PHAVU_007G073400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRCAWRC"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="PhylomeDB" id="V7BG46"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="263"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="337"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="378"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="410"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="442"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="493" mass="53779" checksum="953E39B1F2EA8945" modified="2014-02-19" version="1">MDAPLLVNGEGAKLLAEDGDYVPARNFKTVKDVFWIETKRMWVIALPIVFNIWCQFGVNSVTSIFVGHLGDIELSAISLINSVIGSFAFGFMLGMGSATETLCGQAFGAGQVNMLGIYMQRSWVILSVTSILLLPIYIFAAPILKLLGQQTDIADLAGNFSILVIPQFLSLAFNFPTQKFLQSQSKVNVIAWIGLVALVLHVGMLWLLVYTLELGLTGAALAFDITSWGITAAQLIYVVVWCKDGWTGLSWLAFKDIWAFVRLSLASAVMLCLEVWYMMSVIVLAGHLDNAVVAVDSLSICMNINGWEGMIFIGINAAVSVRVSNELGLGRPRAAKYSVYVTTFQSLLLGVFFMGIVLTTRNYYALIFTNSLVLQEAVSKLGVLLAITMVLNSVQPVISGVAVGGGWQALVAYINVGCYYLFGLPLGFLLGYKANLGVEGLWGGMICGILLQTFLLMFILYKTNWKKEVEQTNARMLVWGGQQIEVDKIAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BI76</accession>
    <name>V7BI76_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G171600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BI76"/>
    <dbReference type="STRING" id="3885.V7BI76"/>
    <dbReference type="Gramene" id="ESW16623">
        <property type="protein sequence ID" value="ESW16623"/>
        <property type="gene ID" value="PHAVU_007G171600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0SS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1931548at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33356:SF13">
        <property type="entry name" value="DUF4005 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33356">
        <property type="entry name" value="TIP41-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="233" mass="25953" checksum="422983B7308F0A9E" modified="2014-02-19" version="1">MAAMHDDGEVGFEEGMLWLPSHVLDEACGTKECMRNRYQKVQNHHQMRQLGHQKSPGEPKPQFSKSTSRSSYTRPKLANGGPGMRVIFLGSAQRSCGTGVFLPQRAGTNFQPSKRPACAPVLLPARVVQALNLNARTLGVQISPPQGIRYICTGTTLINFVFFTVIFLREKLITLAFDLVAVQRYNPIICREACNNNSIETKSGQKDASKQCSFTSQNRSSSPEIFLPKEWTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIR5</accession>
    <name>V7BIR5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">U-box domain-containing protein</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G267800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIR5"/>
    <dbReference type="SMR" id="V7BIR5"/>
    <dbReference type="Gramene" id="ESW17782">
        <property type="protein sequence ID" value="ESW17782"/>
        <property type="gene ID" value="PHAVU_007G267800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR5G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CATYLKD"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF24">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE PUB24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="6">
        <location>
            <begin position="5"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="405" mass="45837" checksum="98BFEE03FF229108" modified="2014-02-19" version="1">MEEIEVPQYFICPISLQIMRDPVTAITGITYDRESIEQWLFDNKNSTCPVSKQLLPRDSDLTPNHTLRRLIQAWCTQNAALGIVRIPTPKPPLHKIQVLKLLKDLHNHKSLVQLELLAAENERNKKCLLEAGVPRAMIIFIINCYRKAQIQKGLHEALSILQFVKIPKNEWPQLVKDHDQTLDSLTWILCHEEMENSIAVKSHVVLLLKKIINKGDTCHVLERLKPEFFEAMVKILRHGVTQQGTSAALHVLLSASSSTRNRIMMVEAGVVHEVVEIELGAPEKRVTELTLAILFHLCCCANGRAKFLSHEGAIAVVTERILKVSAAVDDRAVFVLAMVAKFSGTKVVLQEMLKMGSMAKLCMVVQADRAKYLKDKAMEVLKEHSEVWTDSLCFPHSSFRAYVRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK49</accession>
    <name>V7BK49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Inosine triphosphate pyrophosphatase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G237000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK49"/>
    <dbReference type="STRING" id="3885.V7BK49"/>
    <dbReference type="Gramene" id="ESW17408">
        <property type="protein sequence ID" value="ESW17408"/>
        <property type="gene ID" value="PHAVU_007G237000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3222">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTEIWEM"/>
    <dbReference type="OrthoDB" id="6288734at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009143">
        <property type="term" value="P:nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00985">
        <property type="entry name" value="Maf_Ham1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="RdgB/HAM1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067:SF9">
        <property type="entry name" value="INOSINE TRIPHOSPHATE PYROPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067">
        <property type="entry name" value="INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="ITPase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="124" mass="13602" checksum="737C5CDEF59F61FF" modified="2014-02-19" version="1" fragment="single">RTGQQQAGQVDLQAKKEIDFGSNRKNQTEIWEMAAARGLLLSRPVTFVTGNAKKLEEVRAILGNSIPFQSLKLDLPELQGEPEDISKEKARMAALQVNGPVLVEDTCLCFNALKGLPGFISNLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK88</accession>
    <name>V7BK88_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G240700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK88"/>
    <dbReference type="SMR" id="V7BK88"/>
    <dbReference type="STRING" id="3885.V7BK88"/>
    <dbReference type="Gramene" id="ESW17448">
        <property type="protein sequence ID" value="ESW17448"/>
        <property type="gene ID" value="PHAVU_007G240700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0305">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="APYLMED"/>
    <dbReference type="OrthoDB" id="10263272at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005680">
        <property type="term" value="C:anaphase-promoting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010997">
        <property type="term" value="F:anaphase-promoting complex binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990757">
        <property type="term" value="F:ubiquitin ligase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031145">
        <property type="term" value="P:anaphase-promoting complex-dependent catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1905786">
        <property type="term" value="P:positive regulation of anaphase-promoting complex-dependent catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033010">
        <property type="entry name" value="Cdc20/Fizzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918">
        <property type="entry name" value="CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19918:SF43">
        <property type="entry name" value="CELL DIVISION CYCLE 20.2, COFACTOR OF APC COMPLEX-LIKE ISOFORM X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="287"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="391" mass="44589" checksum="590E67D12E2FB6AC" modified="2014-02-19" version="1">MWNLEHDWYSPKSLLSTPTHYDFPGDRFVPNRSLMDLDQAQSLLTNRTKKIQNKKFNDAYRQIVDEKLSLDSEGKPFRMLVFRGSPKSSRKSIRYIDEIREEEAAALQNISNQHSSRRLPKGESRILDAPNIRNDYYANIMDWGKNNILAVALGSKMYLWNSDNSNVTKLFNATGNDFPTSVSWSEDTKYLSVGFKSSKLELWDAETSKPVCFFLFTGLLKDQQVVNYTLQICADNSVFNFQIRILEGHGERIATIAWNGHILTSGSHDKYILNHDVRARTNVISRVKAHRAEVCGLKWSRSNILASGGNENHIYVWDLAKMSSSNFLHCFKDHCAAVKALAWCPYDSGVLASGGGTEDRCIKFWNVKNGTCIFSIDTKAQARQLFVSLFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKE2</accession>
    <name>V7BKE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF7875 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G205000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKE2"/>
    <dbReference type="STRING" id="3885.V7BKE2"/>
    <dbReference type="Gramene" id="ESW17036">
        <property type="protein sequence ID" value="ESW17036"/>
        <property type="gene ID" value="PHAVU_007G205000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S14W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACEPQNI"/>
    <dbReference type="OrthoDB" id="1857261at2759"/>
    <dbReference type="PhylomeDB" id="V7BKE2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057197">
        <property type="entry name" value="DUF7875"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36331">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36331:SF1">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25285">
        <property type="entry name" value="DUF7875"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF7875" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="96" mass="10669" checksum="67CF36C4F3320120" modified="2014-02-19" version="1">MSLRRFFGFSDGEVMRSDAKPCSRLMRHTAGIYSVGGALGFWILCRLHYGPRITNPRSLRWAACGAVTVSSSTALLVRLFSPECEPQNIAAYDNKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKH2</accession>
    <name>V7BKH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G207300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKH2"/>
    <dbReference type="SMR" id="V7BKH2"/>
    <dbReference type="Gramene" id="ESW17066">
        <property type="protein sequence ID" value="ESW17066"/>
        <property type="gene ID" value="PHAVU_007G207300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0568">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHAVKMF"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7BKH2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF22">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="168"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="203"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="239"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="59"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="105"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW17066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="300" mass="33011" checksum="C7914106E7EB4036" modified="2014-02-19" version="1">MASLCGRGTITAIRRTLILTSNSNTNANTFNHTFSSLLLPPPSPPISVSNSHALQRHFSSTKNPVDTKLNFSLSDSDSDSDDQNINTQKETGKTNRVVPPPYDPFSKKPATEDPKDPKDLQQIFHDMRSGDGLLNHAVKMFDALSKDGLTHEALELFGQIKDKGQMPDVVAHTAILEAYANAAQPKEALKVYMRMLASGVSPNAYTYAVLITALAADAKFVKDAIKYLLEMIGKGMKPNAKTYTSVFEGLLKEERIDEATCLLEQMKAKGFVPDEKAVREVLNNKRGPVFRNLINVLFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMS5</accession>
    <name>V7BMS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SnoaL-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G108800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMS5"/>
    <dbReference type="Gramene" id="ESW19247">
        <property type="protein sequence ID" value="ESW19247"/>
        <property type="gene ID" value="PHAVU_006G108800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2546">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SICCPST"/>
    <dbReference type="OrthoDB" id="44820at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018790">
        <property type="entry name" value="DUF2358"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31094">
        <property type="entry name" value="RIKEN CDNA 2310061I04 GENE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31094:SF2">
        <property type="entry name" value="RIKEN CDNA 2310061I04 GENE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10184">
        <property type="entry name" value="DUF2358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="NTF2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="246" mass="28403" checksum="5AA0898A1BDBD91E" modified="2014-02-19" version="1">MSLLIHCSEPFFVPKIVHNLNPRPGKLYNFKPLTKSKTIGLKVSCKIKDYGVLGLDQNFSSYGPFSAPVKRGSKGEEDQEKQEYYVNLGYALRSLREDFPALFHRELSLDIYRDDIVFKDPLNTFVGIESYKSIFWALRFHGRMFFKALWIDLGSVTQPAENVIMVRWTVHGIARGPWESRGRFDGTSEYKLDKNGKIFQHRVDNVAHNTHSKFKVLRVEELLQSICCPSTPRPTYFEISSSTKRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNC2</accession>
    <name>V7BNC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">V-type proton ATPase subunit e1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G049200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the V-ATPase e1/e2 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNC2"/>
    <dbReference type="SMR" id="V7BNC2"/>
    <dbReference type="STRING" id="3885.V7BNC2"/>
    <dbReference type="Gramene" id="ESW18533">
        <property type="protein sequence ID" value="ESW18533"/>
        <property type="gene ID" value="PHAVU_006G049200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW18534">
        <property type="protein sequence ID" value="ESW18534"/>
        <property type="gene ID" value="PHAVU_006G049200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3500">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FCARICC"/>
    <dbReference type="OrthoDB" id="1508846at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033179">
        <property type="term" value="C:proton-transporting V-type ATPase, V0 domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008389">
        <property type="entry name" value="ATPase_V0-cplx_e1/e2_su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12263:SF0">
        <property type="entry name" value="V-TYPE PROTON ATPASE SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12263">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE SUBUNIT H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05493">
        <property type="entry name" value="ATP_synt_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="32"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW18533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="7746" checksum="A8E62E9E36EDB958" modified="2014-02-19" version="1">MGFLVTTLIFIVIGIIASLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYVAQMKPLIVPILSEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNL8</accession>
    <name>V7BNL8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G017600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNL8"/>
    <dbReference type="SMR" id="V7BNL8"/>
    <dbReference type="Gramene" id="ESW18156">
        <property type="protein sequence ID" value="ESW18156"/>
        <property type="gene ID" value="PHAVU_006G017600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QQFWTAS"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000027">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000065">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1360">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW18156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="457" mass="51525" checksum="915F9D6B851EDC74" modified="2014-02-19" version="1">MQLSKLLLCTGFHVTFVNTEFNHKRLVKSLGEDFVKGQPGFQFETIPDGLLPSDKDATQSIAALCDSTSKHCFVPLKELVEKLNASHEVPMVSSIMYDGLMGFAGNVARELNIAEQQFWTASACGLMGYLQFDELVKRGIIPFQDESFSGDGSLDKNLDWISGMKNMRIRDLPSFVRTTTLDETNFICFGSEAKTCMRSSSIIINTVEELENEVLNALMAINPKIYNIGPLQLLGRHFPDKDRGFKASGSNLWKNDLECMKWLDEWEPSSVIYVNYGSIAVMSEHHLKEFAWGLANSNLPFLWIKRPDLVMGDSTPLPQDFLDEVKGRGYITSWCAQDEVLSHPSIGVFLTHCGWNSTLEGICGGVPMIGWPFFAEQQTNCRYICTNWGIGMDVKDDVKREEVTTLVKEMIMGEKGKKMRQQCLEWKKKAIEATSLGGSSYNDFHRLLKEVYHQDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP27</accession>
    <name>V7BP27_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mitochondrial transcription termination factor family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G032400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the mTERF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP27"/>
    <dbReference type="SMR" id="V7BP27"/>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENCIVPR"/>
    <dbReference type="OrthoDB" id="637682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.70.10:FF:000001">
        <property type="entry name" value="Mitochondrial transcription termination factor-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.70.10">
        <property type="entry name" value="Transcription termination factor 3, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003690">
        <property type="entry name" value="MTERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038538">
        <property type="entry name" value="MTERF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068">
        <property type="entry name" value="CGI-12 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068:SF133">
        <property type="entry name" value="MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02536">
        <property type="entry name" value="mTERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00733">
        <property type="entry name" value="Mterf"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW18336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="324" mass="37125" checksum="ED031ADDAF2CC976" modified="2014-02-19" version="1" fragment="single">LQRSKAYICGTLKSEELAKRVNLKTPDGPNAVLDTLKDYGFSKTQVAKLVEKNPRLLAAKLETTLLPKLKFFHSIGASNTVIHKIALENPLILLRSLENCIVPRYQIIRRIVRDDGEVVRVLRNAPLGFTYCDLWNDLVPNIEILRQSGVPQGSISLLMVNFPSAAMGKHSRFVEVFERIKKIGFDHKKTNFVMAIQVLLTMREGAWESKFKIYERWGWNWEMALQAFVKFPNFMKLSEETVTKKMTFLVKDMGLPSLDIAAYPPILAYNLENRIIPRLTVIKILKSKGLLKSSLSFGSYMGMTEEIFLKKFVIVFEGLCWLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPL2</accession>
    <name>V7BPL2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G087400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPL2"/>
    <dbReference type="Gramene" id="ESW18985">
        <property type="protein sequence ID" value="ESW18985"/>
        <property type="gene ID" value="PHAVU_006G087400g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10288582at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="73" mass="8560" checksum="855D9CF84FFEB0CF" modified="2014-02-19" version="1">MDQINWLGFSKEKNRTVCSASITWGNNHHIHQTMDQIHWLGFSKEKNRTVCSASITWGNNHHIHQTVLRINIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPZ3</accession>
    <name>V7BPZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">U-box domain-containing protein 7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G176600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPZ3"/>
    <dbReference type="SMR" id="V7BPZ3"/>
    <dbReference type="STRING" id="3885.V7BPZ3"/>
    <dbReference type="Gramene" id="ESW20047">
        <property type="protein sequence ID" value="ESW20047"/>
        <property type="gene ID" value="PHAVU_006G176600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLMDTMN"/>
    <dbReference type="OrthoDB" id="777117at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46700">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46700:SF2">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="361"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="434" mass="48400" checksum="1BE66BAB82745600" modified="2014-02-19" version="1">MSTPSSSSSIWVLSNIKLQFFARIRRFLQSKASRKRFDPSDRFDTAKSRGEHKKAENLETVQVMEKPEEEEEEEVSEIMFQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMAASPVASRRRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTRSKLAELLLSLSSLANTQFHLASLDFLPLLKHIFETDTCFDTKQSCLGALYNLSTVLENASPMVSSGVVPILLEVSSLKEISEKALATLGNLSVTLMGKKAIENSTMVPETFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMVEAGLVPVLLELVLLGSPLAQKRAMKLLQWFKDERQTRMGPHSGPQTPRFAMGSPVDQREAKEGKRMMKSLVKQSLHRNMEMITNRANAAGESSKLKSLIISTSSKSLPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQW5</accession>
    <name>V7BQW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Coatomer subunit epsilon</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G122500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic vesicle</location>
            <location evidence="2">COPI-coated vesicle membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the COPE family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQW5"/>
    <dbReference type="SMR" id="V7BQW5"/>
    <dbReference type="STRING" id="3885.V7BQW5"/>
    <dbReference type="Gramene" id="ESW19408">
        <property type="protein sequence ID" value="ESW19408"/>
        <property type="gene ID" value="PHAVU_006G122500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3081">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWVGMRE"/>
    <dbReference type="OrthoDB" id="310217at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030126">
        <property type="term" value="C:COPI vesicle coat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006891">
        <property type="term" value="P:intra-Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006890">
        <property type="term" value="P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000140">
        <property type="entry name" value="Coatomer subunit epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006822">
        <property type="entry name" value="Coatomer_esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10805">
        <property type="entry name" value="COATOMER SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10805:SF0">
        <property type="entry name" value="COATOMER SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04733">
        <property type="entry name" value="Coatomer_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016478">
        <property type="entry name" value="Coatomer_esu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11 13" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="7 13" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 13" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 13" id="KW-0653">Protein transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRNR" id="PIRNR016478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW19408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="290" mass="32339" checksum="6939DDC625267606" modified="2014-02-19" version="1">MATPDHLFNLRNNFYLGAYQAAINSSDVSNLSEDDALERDTLVHRCYIALGQLQFVISEIHDDAPTPLQAVKLLALYFSSPDTKDSAISSLREWLADPAIGNNATLRLVAGLVFLHENDFNEALKHTNAGGTMELHALNVQIFIKMHRSDYAERQLRTMQQIDEDHTLTQLANAWLDLAVGGSKIQEAYLIFQDMSERYQSTSLLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETLANLVVCCLHLGKPSNKSFSQLKLSHADHVLVKRVTSAEESFDRALQTFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSF9</accession>
    <name>V7BSF9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G169100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSF9"/>
    <dbReference type="SMR" id="V7BSF9"/>
    <dbReference type="Gramene" id="ESW19958">
        <property type="protein sequence ID" value="ESW19958"/>
        <property type="gene ID" value="PHAVU_006G169100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAQQVPC"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="PhylomeDB" id="V7BSF9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1110:FF:000003">
        <property type="entry name" value="GDSL esterase/lipase APG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051238">
        <property type="entry name" value="GDSL_esterase/lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650">
        <property type="entry name" value="GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650:SF77">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754940" description="GDSL esterase/lipase" evidence="8">
        <location>
            <begin position="28"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="365" mass="40044" checksum="F9515AC007A63420" modified="2014-02-19" version="1">MASGKHIMNIGLVMLVVILWSNGVGFAQQVPCYFIFGDSLVDNGNNNRLNSLAKANYLPYGIDFSGGPTGRFSNGKTTVDVVAELLGFNGYISPYATARGRDILRGVNYASAAAGIRDETGQQLGGRISFSGQVQNYQRTVSQIVNLLGDENTAANYLSKCIYSIGLGSNDYLNNYFMPLVYSSSRRYTPQQYADLLIQAYTQQLRILYNNGARKMALFGVGQIGCSPNALAQNSPDGRTCVARINSANQLFNNGLRSLVDQFNNQFPDARVIYVNVYGIFQDIINNPASFGFRVTNAGCCGVGRNNGQITCLPLQPPCRNRREYLFWDAFHPTESANTVIGRRAYNAQSASDAYPIDINRLAQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSG9</accession>
    <name>V7BSG9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G170000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OBAP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSG9"/>
    <dbReference type="STRING" id="3885.V7BSG9"/>
    <dbReference type="Gramene" id="ESW19968">
        <property type="protein sequence ID" value="ESW19968"/>
        <property type="gene ID" value="PHAVU_006G170000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPUT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTWQADR"/>
    <dbReference type="OrthoDB" id="1901244at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010686">
        <property type="entry name" value="OBAP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31360:SF1">
        <property type="entry name" value="OIL BODY-ASSOCIATED PROTEIN 2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06884">
        <property type="entry name" value="DUF1264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW19968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="245" mass="27660" checksum="4A633B73B6AD2887" modified="2014-02-19" version="1">MASSDKSPEPTPAKGPEPTPGKAMGVGQHMIDKGAMMIQSLEPIKQICHHACSFAIYSHDMSRQIQTHHYCSRLHQNFLQCAVYDSDESDARLLGVEYIISDDIFETMPPEEQKLWHSHAYEIKSGLWVNPRVPEVIAMPELENLAKTYGKFWCTWQADRGDRLPMGAPALMMSPQAVGPGVVRPELVVERDAKYIISSESLKSSRLEIPEPEMINPLADYWKQHGKGFAIDIEETRMKLRAPFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSS8</accession>
    <name>V7BSS8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Stress-associated endoplasmic reticulum protein 2-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G141100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RAMP4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSS8"/>
    <dbReference type="SMR" id="V7BSS8"/>
    <dbReference type="STRING" id="3885.V7BSS8"/>
    <dbReference type="Gramene" id="ESW19626">
        <property type="protein sequence ID" value="ESW19626"/>
        <property type="gene ID" value="PHAVU_006G141100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3491">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KNVNNRG"/>
    <dbReference type="OrthoDB" id="16679at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030968">
        <property type="term" value="P:endoplasmic reticulum unfolded protein response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010580">
        <property type="entry name" value="ER_stress-assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15601:SF0">
        <property type="entry name" value="GEO09675P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15601">
        <property type="entry name" value="STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06624">
        <property type="entry name" value="RAMP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW19626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="65" mass="7229" checksum="B36AF65B7922DC94" modified="2014-02-19" version="1">MTTSRRLADRKIARFERNISKKGSESTKKGYSYPVGPIVLGFFVFVVVGSSLFQIIRTASSRGMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BU96</accession>
    <name>V7BU96_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Deoxynucleoside kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G000500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BU96"/>
    <dbReference type="SMR" id="V7BU96"/>
    <dbReference type="STRING" id="3885.V7BU96"/>
    <dbReference type="Gramene" id="ESW20598">
        <property type="protein sequence ID" value="ESW20598"/>
        <property type="gene ID" value="PHAVU_005G000500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4235">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQKLIRR"/>
    <dbReference type="OrthoDB" id="567086at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019136">
        <property type="term" value="F:deoxynucleoside kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01673">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050566">
        <property type="entry name" value="Deoxyribonucleoside_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031314">
        <property type="entry name" value="DNK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10513:SF35">
        <property type="entry name" value="DEOXYADENOSINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10513">
        <property type="entry name" value="DEOXYNUCLEOSIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01712">
        <property type="entry name" value="dNK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Deoxynucleoside kinase" evidence="2">
        <location>
            <begin position="246"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="124"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="124"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="563" mass="63601" checksum="383AA77E3A840CFE" modified="2014-02-19" version="1">MQKLLNPSASSSSSSSSSLPFFSISVLSFPKVSNFLPMSAPPHPPPAVSSLSDKKKPFAALMPHLSSRYLSFSSNTCCGCRLSLNPTPTRTNTLLLLNHSPNRSLFSASHGSFISHSLHGVSVESDHAKEKRPFSLRLNRRQKGPTPSSSPAPSNPDLLAIPGVGPRNLRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSIGIIHKNHAESITTFIKKSVDEELEDNSSAQHQQKKRLTFCVEGNISVGKTTFLQRIANETIELRDLVEVVPEPINKWQDVGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEANWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMLRKREEEGGVSLDYLRDLHEKHESWLFPFQSGNHGVLSVNKLPHHIDNSLHPDIRDRVFYLEGGHMHSSIQKVPALVLDCEPNIDFSKDIEAKRQYARQVAEFFEFVKKKQEVPSKEGVEDARNSQAQRKLMLPHEGGLWLPDGKPFPQEALRPLDFRRAMSFMSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUF5</accession>
    <name>V7BUF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G084600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUF5"/>
    <dbReference type="SMR" id="V7BUF5"/>
    <dbReference type="STRING" id="3885.V7BUF5"/>
    <dbReference type="Gramene" id="ESW21609">
        <property type="protein sequence ID" value="ESW21609"/>
        <property type="gene ID" value="PHAVU_005G084600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRBC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGMNWYS"/>
    <dbReference type="OrthoDB" id="1921961at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048316">
        <property type="term" value="P:seed development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000005">
        <property type="entry name" value="NAC transcription factor 56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31719:SF148">
        <property type="entry name" value="NAC TRANSCRIPTION FACTOR 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31719">
        <property type="entry name" value="NAC TRANSCRIPTION FACTOR 56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="7">
        <location>
            <begin position="16"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="296"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="296"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="369" mass="40771" checksum="5D1042D377A5BB2E" modified="2014-02-19" version="1">MESTDSSTGSQQQPQLPPGFRFHPTDEELVVHYLKKKTASVPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMEHDREDSMEDMIGGIPPSINVGHMSGRYHLSKMSTGYSSALLENDQNLLEGMMIGNGSVMNTSTATTNTTPGAMASNSKAELSFVPSMTHSSNTSKRTLSSLYWNDEDVAGTSSSNKRFNLESGDNNHGSVVRTDQENGTATSIVTLLNQLPQTPSLHQQSMLGSIGDGLLRTTYQIPGMNWYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV18</accession>
    <name>V7BV18_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Rad21/Rec8-like protein N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G024000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the rad21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV18"/>
    <dbReference type="STRING" id="3885.V7BV18"/>
    <dbReference type="Gramene" id="ESW20900">
        <property type="protein sequence ID" value="ESW20900"/>
        <property type="gene ID" value="PHAVU_005G024000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1213">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEECKIL"/>
    <dbReference type="OrthoDB" id="10071381at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008278">
        <property type="term" value="C:cohesin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990414">
        <property type="term" value="P:replication-born double-strand break repair via sister chromatid exchange"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007062">
        <property type="term" value="P:sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.580">
        <property type="entry name" value="Structural maintenance of chromosome 1. Chain E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039781">
        <property type="entry name" value="Rad21/Rec8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006909">
        <property type="entry name" value="Rad21/Rec8_C_eu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006910">
        <property type="entry name" value="Rad21_Rec8_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023093">
        <property type="entry name" value="ScpA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12585">
        <property type="entry name" value="SCC1 / RAD21 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12585:SF55">
        <property type="entry name" value="SISTER CHROMATID COHESION 1 PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04824">
        <property type="entry name" value="Rad21_Rec8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04825">
        <property type="entry name" value="Rad21_Rec8_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rad21/Rec8-like protein N-terminal" evidence="6">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="Rad21/Rec8-like protein C-terminal eukaryotic" evidence="5">
        <location>
            <begin position="190"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="163"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="244" mass="26958" checksum="26A18D324B2DF5A2" modified="2014-02-19" version="1">MFYSPFLFTRNGLLATVWTAGHLQHRLKKADCSSTDIPRAVRDIMHYCAPAAPRMSGYLLLGVVRIYSKKVEYVHEECKILEVSQFQSVTLPESFELDAQNIEDCTCMVLPQNEVEPIEVPRGLDLSPPLAMEAIDDHNIDDAMPEAEPDSFMIPDELMPQSNLPTPSTFQGGAISDGQDSAGDQDLPDLSLNQILEGKTRAIAARMFFEVLVLGTNKVVDVKQEEPYGDVSLKLAATPSNDQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWH7</accession>
    <name>V7BWH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Histone H2A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_005G141800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 10">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the histone H2A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWH7"/>
    <dbReference type="SMR" id="V7BWH7"/>
    <dbReference type="STRING" id="3885.V7BWH7"/>
    <dbReference type="Gramene" id="ESW22294">
        <property type="protein sequence ID" value="ESW22294"/>
        <property type="gene ID" value="PHAVU_005G141800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1756">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DLHLMHL"/>
    <dbReference type="OrthoDB" id="9421954at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000792">
        <property type="term" value="C:heterochromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070828">
        <property type="term" value="P:heterochromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00074">
        <property type="entry name" value="HFD_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000026">
        <property type="entry name" value="Histone H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002119">
        <property type="entry name" value="Histone_H2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032454">
        <property type="entry name" value="Histone_H2A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032458">
        <property type="entry name" value="Histone_H2A_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23430">
        <property type="entry name" value="HISTONE H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16211">
        <property type="entry name" value="Histone_H2A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00620">
        <property type="entry name" value="HISTONEH2A"/>
    </dbReference>
    <dbReference type="SMART" id="SM00414">
        <property type="entry name" value="H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00046">
        <property type="entry name" value="HISTONE_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9 10" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="8 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="12">
        <location>
            <begin position="20"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="Histone H2A C-terminal" evidence="13">
        <location>
            <begin position="100"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="123"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="127"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF16211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW22294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="15754" checksum="1C2DB0BCFC71EADF" modified="2014-02-19" version="1">MDTTGKIKKGAGGRKGGGPKKKAVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKSDKASKEPKSPSKATKSPRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWU6</accession>
    <name>V7BWU6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G077200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PC-esterase family. TBL subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW21515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWU6"/>
    <dbReference type="Gramene" id="ESW21515">
        <property type="protein sequence ID" value="ESW21515"/>
        <property type="gene ID" value="PHAVU_005G077200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RTPH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HTNEGED"/>
    <dbReference type="OrthoDB" id="630188at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016413">
        <property type="term" value="F:O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029962">
        <property type="entry name" value="TBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026057">
        <property type="entry name" value="TBL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025846">
        <property type="entry name" value="TBL_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285:SF30">
        <property type="entry name" value="PROTEIN TRICHOME BIREFRINGENCE-LIKE 42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285">
        <property type="entry name" value="PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13839">
        <property type="entry name" value="PC-Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14416">
        <property type="entry name" value="PMR5N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Trichome birefringence-like N-terminal" evidence="8">
        <location>
            <begin position="45"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Trichome birefringence-like C-terminal" evidence="7">
        <location>
            <begin position="101"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF14416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="362" mass="41318" checksum="2C37300809B23451" modified="2014-02-19" version="1">MFLFYLYINIHALSTHCVQFEMVFSLWLCPLVLASAFVWAVPYQGCDFSEGKWVIDEPSFHPLYDASRDCPFIGQGFDCLRNGRTDEEYLKYRWKPSGCDLPRFDGKKFLEKNTGKKIMFVGDSISNNMWQSLTCLLHIAVPNSTYTSTSQTQQLSVFSFPEYKASIMWLKNGFLVDLVIDKEKGRILKLDTISSGDQWKGVDVLIFNSYHWWTHTGHSQAWDYFQVGSELIKDMDHMEAFKIGLTTWAKWVDSNIDPSKTRVLFQGIAASHVDKKGCLRQTQPEEGSMAAYPGVDIVKTVISNMEKAVELLDITMLTQLRRDGHPSIYTGRGTSFDDCSHWCLAGVPDSWNEILYALLLGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWW5</accession>
    <name>V7BWW5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="4">FHA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G158200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWW5"/>
    <dbReference type="SMR" id="V7BWW5"/>
    <dbReference type="STRING" id="3885.V7BWW5"/>
    <dbReference type="Gramene" id="ESW22502">
        <property type="protein sequence ID" value="ESW22502"/>
        <property type="gene ID" value="PHAVU_005G158200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYC4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MGHEFDS"/>
    <dbReference type="OrthoDB" id="688570at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd22671">
        <property type="entry name" value="FHA_APTX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37733">
        <property type="entry name" value="SMAD/FHA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37733:SF1">
        <property type="entry name" value="SMAD_FHA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SMAD/FHA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="192"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="221"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="245"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="294" mass="34200" checksum="01E1DABF282280BE" modified="2014-02-19" version="1">MEVEVEGEDGSKLALVNDEKTVFGRGCGFSTHDRTVSRRHVSFKLHHSDSDVADDANARVSFEVMGKNPFWVYDGEALRLFRKFEKGQLQLGDRFCFSPNAPLWYSFTLSNNQPLPQLNLDEIQISEIDPVKEFGFLVMGHEFDNYPKGMIRNAKNWEWFLEEPRKDSQDEEDSEKERRRMKGKRKMGKIYEDDEWTGESEDDKEAVVGMRKSKLPRYSTRSKDSKGGNKDTKTSENSKGKERATDEEEEEDDDDDDDETLKGFIVADEDDHKELEDDEEEEEEFEEDDDELDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXY9</accession>
    <name>V7BXY9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DRBM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G180800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXY9"/>
    <dbReference type="SMR" id="V7BXY9"/>
    <dbReference type="STRING" id="3885.V7BXY9"/>
    <dbReference type="Gramene" id="ESW22784">
        <property type="protein sequence ID" value="ESW22784"/>
        <property type="gene ID" value="PHAVU_005G180800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4Z9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="786951at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014720">
        <property type="entry name" value="dsRBD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14709">
        <property type="entry name" value="DND1_DSRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00358">
        <property type="entry name" value="DSRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54768">
        <property type="entry name" value="dsRNA-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50137">
        <property type="entry name" value="DS_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DRBM" evidence="3">
        <location>
            <begin position="127"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="37"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="95"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="40"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="96"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="210" mass="22874" checksum="285D5153178771F6" modified="2014-02-19" version="1">MSSQTAKVLDRTRQISMETRVPKLAVNLKHLPPIEPSLIPNHSSNSKGKLNSGCSRATAKAVKGKPRVGTKLGASDKDIVKEPSLGMTNIVVEEASSISSNQNSKSCGTPTTSPTQTQTQEGMKKGTARSNLYKTCAANHWKPPIFDCCIEEGPSHKRMFTFKVIIEIQASKNTLECYGAPHRKKKEAADHAAEGALFYLQYIGYAVKNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY92</accession>
    <name>V7BY92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bacterial surface antigen (D15) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G118400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast outer membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY92"/>
    <dbReference type="SMR" id="V7BY92"/>
    <dbReference type="STRING" id="3885.V7BY92"/>
    <dbReference type="Gramene" id="ESW22005">
        <property type="protein sequence ID" value="ESW22005"/>
        <property type="gene ID" value="PHAVU_005G118400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT7K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSPHDSM"/>
    <dbReference type="OrthoDB" id="2013615at2759"/>
    <dbReference type="PhylomeDB" id="V7BY92"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009707">
        <property type="term" value="C:chloroplast outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009658">
        <property type="term" value="P:chloroplast organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.50:FF:000007">
        <property type="entry name" value="Outer envelope protein 80, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.50">
        <property type="entry name" value="membrane protein fhac: a member of the omp85/tpsb transporter family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815:SF40">
        <property type="entry name" value="OUTER ENVELOPE PROTEIN 36, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0934">Plastid</keyword>
    <keyword evidence="1" id="KW-1002">Plastid outer membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bacterial surface antigen (D15)" evidence="4">
        <location>
            <begin position="53"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="360" mass="38911" checksum="AA8ACFE62BB7AA8C" modified="2014-02-19" version="1">MGAQKSIHAGKAKIDVNVDFTHKLCASLMLPTLRSSGSPFSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAYRRPRPEWLAQQSFVLQHSLSPEIGIHGIPVNNFSRSGSGGINLSRLSVGMDLKEPASSKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGNPHDSMVVLKQESQFAKANDNSFFHFNLQIEQGIPVLSKWIIFNRFKFVASKGIKLGPAFLLSRLTGGSIVGDMAPYQAFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPLNKMLEGAIFLDCGTDLRSGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQRTLYFGLSNLPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYR1</accession>
    <name>V7BYR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G131700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYR1"/>
    <dbReference type="SMR" id="V7BYR1"/>
    <dbReference type="Gramene" id="ESW22150">
        <property type="protein sequence ID" value="ESW22150"/>
        <property type="gene ID" value="PHAVU_005G131700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RRJS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1418158at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427:SF5">
        <property type="entry name" value="DUF4283 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="6"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="530"/>
            <end position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="742" mass="83476" checksum="FD55D0685B3018CB" modified="2014-02-19" version="1">MNERGTPFFFSNFPFDLKESDLWKIFRRWGRVSDVFISRKLNIKKQRFGFVRFLGVQNVRELKYHLNTIWIGSWKLNANRPKYIRAAETRKEWNAKLKEKALEPEKEIKKVWRAKGTTSYANTVKNGNGNRATPQNRGSLHAIHFKAEETPRELLNTCHIGRVSDLSKISTLNESFILGGLGFIKVKFLGGFHVLLKGENEMTIKDAIEENKEWFEEIFDTIIPWNEQFVAVDKLVWVRCRGLPLKLWNYDCFKHIAVLLGTLVEIDEATLALEEMEYARFRIRISVGCEAKITSYMNINDVLYQVSVEEEYTVPDYKLCQCHWSEESEDIETEIDSIASNDSVGSGSRDFEEVRKVVEENSMVDASKALPPTTQGCRNLGPSAPATCCKPILARPVGPVSKPILKSIIGSENLGSGAPTALTRADVGFLCGPSETAQCVVNKETSEKEEGRCSNKKQMEALSKHGPDANRVPPLWNGLPGSPVNSETFFNLHFSEQNEQTGAAIDVAHQEVTCNGKINERPNILLKVTHGTTRPSEPSPTVAVKGGMQGSPKSISRVEDSLCGSQTGEAYHSSLKQNSKETKHINTNSNVQPGLCLSIIRDTYAPFDNSTNNDDQLAADAMAHQTKQGFEPVTINSSSTEDRRIFWMGESSKISKREERKNVRLALSHISNSVSDMTINNYNRLFWLKHGSLETIRVWELGKQIGATCGVEGNVMVSLEELEKRDRSMKIQRDVREVTGYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZU7</accession>
    <name>V7BZU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein CHUP1, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G164900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZU7"/>
    <dbReference type="SMR" id="V7BZU7"/>
    <dbReference type="STRING" id="3885.V7BZU7"/>
    <dbReference type="Gramene" id="ESW22579">
        <property type="protein sequence ID" value="ESW22579"/>
        <property type="gene ID" value="PHAVU_005G164900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22580">
        <property type="protein sequence ID" value="ESW22580"/>
        <property type="gene ID" value="PHAVU_005G164900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSBV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRCADVE"/>
    <dbReference type="OrthoDB" id="1870283at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072699">
        <property type="term" value="P:protein localization to cortical microtubule cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040265">
        <property type="entry name" value="CHUP1/IPGA1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31342">
        <property type="entry name" value="PROTEIN CHUP1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31342:SF59">
        <property type="entry name" value="PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="469"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="524"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="571"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="137"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="216"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="323"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="477"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="579"/>
            <end position="590"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="590" mass="66497" checksum="C109285B9AA0F6EB" modified="2014-02-19" version="1">MVIIQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSQSRKGGSFDHESEVNSGGGIGAALSTCNIISAANFLCSEETCTDRVITGNSPLVLSPDSTQNGDPLKVVDFGATVVRNSFNKDMEAPWLKVYADPDKDDYEQEVTQLRNMIRMLQDREQSLEVQLLEYCGLREQETVVMELQNRLKASTVEVKMFNLKVKTLQSENWRLKEQVSDHAKVLAELESAKAQVKLLNEKIRYEAEQNREQIVSLQQKVSRLQDQQCKDAACDQDIQIKLQKLKDLESEAEELRKSNLRLHIENSHLVRRLDSTQILANAVLEDPEVDAVKQESECLKQENVRLMKEIEQLHSDRCSDLEELVYMRWINACLRYELRNFEAPPGKMVAKDLSRSLSPTSERKAKQLILEYANTDGPGNTVDFDIDQWSSSQASSLTDFGECDDFSDNSFAAKTNTTSQTKLLSKLRQLIQGKDSSHHHCHVSSQEKCGHQDSNPPQQSTSTGIEGLRSESATPIVTSRTSLDFSRLMSTQEEVDRRNSDSVFMGSSKKLSAHQRGSFSDSLGLEKNNLEKYAEALKDSSLSGRHQRRSRSASCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7C040</accession>
    <name>V7C040_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_005G138900g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C040"/>
    <dbReference type="STRING" id="3885.V7C040"/>
    <dbReference type="Gramene" id="ESW22251">
        <property type="protein sequence ID" value="ESW22251"/>
        <property type="gene ID" value="PHAVU_005G138900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPPH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMKRPRA"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009882">
        <property type="term" value="F:blue light photoreceptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042802">
        <property type="term" value="F:identical protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009902">
        <property type="term" value="P:chloroplast relocation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007623">
        <property type="term" value="P:circadian rhythm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009638">
        <property type="term" value="P:phototropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd05574">
        <property type="entry name" value="STKc_phototropin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000133">
        <property type="entry name" value="LOV domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.20:FF:000002">
        <property type="entry name" value="LOV domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000265">
        <property type="entry name" value="Putative LOV domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.20:FF:000036">
        <property type="entry name" value="Putative LOV domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.20">
        <property type="entry name" value="PAS domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="PYP-like sensor domain (PAS domain)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-0157">Chromophore</keyword>
    <keyword evidence="8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0288">FMN</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0600">Photoreceptor protein</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0716">Sensory transduction</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAS" evidence="22">
        <location>
            <begin position="155"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="23">
        <location>
            <begin position="229"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="22">
        <location>
            <begin position="435"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="23">
        <location>
            <begin position="509"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="616"/>
            <end position="906"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="93"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="318"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="20">
        <location>
            <begin position="30"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="20">
        <location>
            <begin position="117"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="20">
        <location>
            <begin position="334"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="20">
        <location>
            <begin position="344"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="20">
        <location>
            <begin position="355"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="20">
        <location>
            <begin position="397"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="20">
        <location>
            <begin position="416"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="645"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW22251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="951" mass="106438" checksum="D7A0F7407B21D37B" modified="2014-02-19" version="1">MEPSEKSPKKVSSVRSSFPRDPRGSLEVFNPNTSTAANSRVRSQPLWKSYTESEESRDEIAATSWMAINPAPQAEVECGAAAQRAAEWGLVLRTDTETGRPQGVAARNSGGEEPNVAKLAAAASSSRKNSQNSARTSGDSSSDGGGDVVGGIPRISEDVMGALSAFQQTFVVSDATKPDCPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDCGDVAKIREALEAGKIYCGRLLNYKKDGTPFWNLLTITPIKDEDGKVLKFIGMLVEVSKHTEGLKEKTLRPNGLPESLIRYDARQKEKATNSVSELLQIMKRPRALSESAGRPSITKSGFAEEEKQSLHEEEEEEEEEEEKEKAKRTLRRKSESEASLGRKSEGGKKFPCNESVKFRRKSESNDESMENDVIEDVSSDSEDGERPDSFDVDDKEKQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLQNGIAEDTAKEGEQMVKQTAENVDVAVRDLPDANMDNPAWKAIQKVLESGEQISLKHFRPIKPLGSGDTGSVHLVELRGTGQYFAMKAMDKGVMLNRNKVHRVCAEREILDQLDHPFLPALYASFQTKSHVCLITDYCPGGELFMLLDQQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSSKPQLIIPASNSKKKKKKKQRNQEVPVFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILVYEMFYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLQGKQLIYWLLQRDPKERLGSREGANEIKRHPFFKGVNWALVRCMKPPQLDAPLLPKTEEEKEAKDIDPGLEDLQTNVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C198</accession>
    <name>V7C198_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 13">Laccase</fullName>
            <ecNumber evidence="4 13">1.10.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Benzenediol:oxygen oxidoreductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Diphenol oxidase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Urishiol oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_004G087000g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Lignin degradation and detoxification of lignin-derived products.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>4 hydroquinone + O2 = 4 benzosemiquinone + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11276"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:17594"/>
            <dbReference type="ChEBI" id="CHEBI:17977"/>
            <dbReference type="EC" id="1.10.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
        <text evidence="13">Binds 4 Cu cations per monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Secreted</location>
            <location evidence="2 13">Extracellular space</location>
            <location evidence="2 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the multicopper oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.2" evidence="4 13"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C198"/>
    <dbReference type="Gramene" id="ESW23914">
        <property type="protein sequence ID" value="ESW23914"/>
        <property type="gene ID" value="PHAVU_004G087000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1263">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIWRDVV"/>
    <dbReference type="OrthoDB" id="2121828at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052716">
        <property type="term" value="F:hydroquinone:oxygen oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046274">
        <property type="term" value="P:lignin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13849">
        <property type="entry name" value="CuRO_1_LCC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13875">
        <property type="entry name" value="CuRO_2_LCC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001117">
        <property type="entry name" value="Cu-oxidase_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034288">
        <property type="entry name" value="CuRO_1_LCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034285">
        <property type="entry name" value="CuRO_2_LCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017761">
        <property type="entry name" value="Laccase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03389">
        <property type="entry name" value="laccase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709:SF443">
        <property type="entry name" value="LACCASE-15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="MULTI-COPPER OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00394">
        <property type="entry name" value="Cu-oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="10 13" id="KW-0186">Copper</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12 13" id="KW-0439">Lignin degradation</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 13" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149050" description="Laccase" evidence="13">
        <location>
            <begin position="24"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="16">
        <location>
            <begin position="33"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="14">
        <location>
            <begin position="159"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="15">
        <location>
            <begin position="432"/>
            <end position="524"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU361119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW23914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="533" mass="60306" checksum="15A98C9FE9830CFC" modified="2014-02-19" version="1">MWLSKKIIFLQTLLCFFLVGISCKRLTEHKFVVKEAHYRRLCSKKPILTVNGHFPGPTIRVHHGQTIYVNVHNKGKSNITLHWHGVKQPRNPWSDGPEYITQCPIKPGGKFRQKLIFSCEEGTLWWHAHSDWARATVHGPIFIYPKKGESYPFPKPHAEVPIVLGEWWKSQVKDVYEEFLRTGGTPNTSDAITINGQPGDLFPCSKSETFKLNVHHGKTYFLRIVNAAMNIIFFFSVSKHNLTVVGADGGYTKPLIRDYIVISPGQTVDVLLHANQKPNHYYMAARAYSSVFGLPFNNATTTARIHYKRNHAPTNSPPLPYFPDYNDTNAVLDYYVSLKGLTETYPHEVPKHITTHILTTLSINTLPCRKDQTCAGPNGTRLTSTMNNISFNAPSIDILEAYYYHINGVFDRGFPRFPPLKFDYTAEYLPLDLEIPKKGTKVAVIKYGSTMEMVFQGTNLVTGIDHPIHVHGFSIFAVGYGLGNFDKEKDPISYNLYDPPLINTILVPKNGWAAIRFHALNPGMLHGKIPLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1W3</accession>
    <name>V7C1W3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G004000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1W3"/>
    <dbReference type="SMR" id="V7C1W3"/>
    <dbReference type="Gramene" id="ESW22896">
        <property type="protein sequence ID" value="ESW22896"/>
        <property type="gene ID" value="PHAVU_004G004000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMNKGED"/>
    <dbReference type="OrthoDB" id="1418008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025093084" description="S-protein homolog" evidence="6">
        <location>
            <begin position="25"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="146" mass="17228" checksum="D53FAB69516E0976" modified="2014-02-19" version="1">MVDSISKVMIILFLLLVLAMQLKGIEIGDPIIPKKVTVEITNKLNMTFLGLRCKEKHRDLGFHILNVGETYSFRFYPNFLFPATLYFCHFKYPGGDHHFDIYVQRRDYYCFHNRCSWEIVENGPCKIKPRSRECFNWNVAFVPANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3U2</accession>
    <name>V7C3U2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G164200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3U2"/>
    <dbReference type="Gramene" id="ESW24832">
        <property type="protein sequence ID" value="ESW24832"/>
        <property type="gene ID" value="PHAVU_004G164200g"/>
    </dbReference>
    <dbReference type="OMA" id="CIYSTHY"/>
    <dbReference type="OrthoDB" id="1419130at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="36682" checksum="B83F4F0F2F8BCEF6" modified="2014-02-19" version="1">MSVFIVLACEHERRQELVLNNSTPSSTHPFQYFVFCCIYSTHYNMGNNNVVCYRHSGSLPFPCHLQLGTYASINLTTSVVYKRNDGSYHDKADVTYTVEGSTCNLALRRAINKNSYVRCVSFELRDSIVDMLFLNINKAETDLLKVQTISDAIFKTKKKKNLHAWGGVTETKVYLYGTANRCGLLVWECNKNDGHQHAKALTIAHYFVHSSGTVAVNRSTETTDIGFSVVVKIGLSDGNFDITVEGPEQHPASALLYMFDEVNRSGIWKPSMCPHCGNVRRNMSSSQTDSEESDGRQGNAVRIYNSDGKFNGHACGASIRCRDFYAFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5W5</accession>
    <name>V7C5W5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G118300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5W5"/>
    <dbReference type="STRING" id="3885.V7C5W5"/>
    <dbReference type="Gramene" id="ESW24296">
        <property type="protein sequence ID" value="ESW24296"/>
        <property type="gene ID" value="PHAVU_004G118300g"/>
    </dbReference>
    <dbReference type="OMA" id="IVMINRE"/>
    <dbReference type="OrthoDB" id="1434552at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="CDD" id="cd22160">
        <property type="entry name" value="F-box_AtFBL13-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053781">
        <property type="entry name" value="F-box_AtFBL13-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32212">
        <property type="entry name" value="CYCLIN-LIKE F-BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32212:SF267">
        <property type="entry name" value="F-BOX_RNI_FBD-LIKE DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="18"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="42512" checksum="34E8C8C0D18B0543" modified="2014-02-19" version="1">MKIKKKPRRNRRGREEEKDRLSELPDCVLVHIMEFMDTKYAVQTCVLSKRWKDLWKHLTTLAFNTFFFNNVTNFSKFVSHVLSRRDDSISLLNLEFTRRGYAQPQPLNRLMKYAVLHNVQQLTIFINLNFKPSFEFRPYIFSCQSLTFLKLSVSSYDPSMILLPESLNMPALRSLQLESVTFTASGSDYAEPFSACHMLNSLILEGCSLQNDVKFLSLCNSNLSNLTVDGSFEAGFFQIELSTPNLSSLSVLGHNNHPFLSSCNLSFLEELTIETYGYTCFHKTELLIISWLQGLTNVKIMTVSVRALEIILQDLSKPLAASIQRPCFVQLKSLQVKKPPHADISNDRLNRALEYLLQNSPLARIDFLVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C606</accession>
    <name>V7C606_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G152800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C606"/>
    <dbReference type="SMR" id="V7C606"/>
    <dbReference type="Gramene" id="ESW24705">
        <property type="protein sequence ID" value="ESW24705"/>
        <property type="gene ID" value="PHAVU_004G152800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1971">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYKPLHK"/>
    <dbReference type="OrthoDB" id="1736837at2759"/>
    <dbReference type="PhylomeDB" id="V7C606"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.620">
        <property type="entry name" value="q2cbj1_9rhob like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006620">
        <property type="entry name" value="Pro_4_hyd_alph"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24014">
        <property type="entry name" value="2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24014:SF4">
        <property type="entry name" value="2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25238">
        <property type="entry name" value="OGFOD2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00702">
        <property type="entry name" value="P4Hc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="8">
        <location>
            <begin position="227"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW24705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="43095" checksum="4DFDB0C99BE791D4" modified="2014-02-19" version="1">MSLHGSDRRDTSSAGGNGTVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVPRDDKAKFMREILLKYLPLGERSRSQKHREYRQKIIENYQPLHRELYSVNPATFFVPSFLRAINDNTEQSFRSIMSEPSPGIFLFDIFQTNFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGSRPEEIFDYSHVPGQAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6C5</accession>
    <name>V7C6C5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G165300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the DEAD box helicase family. DEAH subfamily. PRP16 sub-subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6C5"/>
    <dbReference type="STRING" id="3885.V7C6C5"/>
    <dbReference type="Gramene" id="ESW24845">
        <property type="protein sequence ID" value="ESW24845"/>
        <property type="gene ID" value="PHAVU_004G165300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0924">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFHARAP"/>
    <dbReference type="OrthoDB" id="10253254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18791">
        <property type="entry name" value="SF2_C_RHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:003016">
        <property type="entry name" value="DEAH-box helicase 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1080:FF:000001">
        <property type="entry name" value="Pre-mRNA-splicing factor ATP-dependent RNA helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000615">
        <property type="entry name" value="pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1080">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048333">
        <property type="entry name" value="HA2_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007502">
        <property type="entry name" value="Helicase-assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF91">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE PRP16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21010">
        <property type="entry name" value="HA2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04408">
        <property type="entry name" value="WHD_HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00847">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="11">
        <location>
            <begin position="196"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="12">
        <location>
            <begin position="342"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="790"/>
            <end position="849"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="791"/>
            <end position="821"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW24845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="849" mass="95923" checksum="089B1DCB85E54FF9" modified="2014-02-19" version="1">MQVRRDGTKMSLSQSKKLSQLTADNAQWEDRQLVRSGAVRGTEIQTEFDVEEEHKAILLVHDTKPPFLDGRVVFTKQAEPIMPLKDPTSDMAIISRKGSTLVREIHEKQSMNKSRQRFWELAGSKLGDILGVEKTAEQIDADTAEVGEEGEIDYKEEAKFSQHLKKGEAVSDFAKSKTIAEQRQYLPIFSVREELLQVVRENQVVVVVGETGSGKTTQLTQFLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTDLGDKVGYAIRFEDVTGPSTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLDAQKFSNFFGSVPIFHIPGRTFPVNTLWSKTPVEDYVEGARMEQMMSSSNKVVPKLLILPIYSQLPADLQAKIFEKAEDGARKCIVATNIAETSLTVDGIFYVIDSGYGKMKVYNPRMGMDALQVFPVSRAAANQRAGRAGRTGPGTCYRLYTESAFLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSLYQLWVLGALNNAGGLTDLGWKMVEFPLDPTLAKMLLMGEQLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPITSCWPDTDIVRTAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGMGCTPEYVVYHELILTTKEYMQCATAVEPQWLAELGPMFFSVKDSDKSLLEHKKRQKQEKTAMEEEMENLKKVQTEVERERKQKEKQKTAKHQQQISMPGLKKGSSTFLRPKKFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7E2</accession>
    <name>V7C7E2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G091000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
            <orientation evidence="2">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the complex I NDUFB3 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7E2"/>
    <dbReference type="SMR" id="V7C7E2"/>
    <dbReference type="STRING" id="3885.V7C7E2"/>
    <dbReference type="Gramene" id="ESW26102">
        <property type="protein sequence ID" value="ESW26102"/>
        <property type="gene ID" value="PHAVU_003G091000g"/>
    </dbReference>
    <dbReference type="OMA" id="NQIRHAT"/>
    <dbReference type="OrthoDB" id="521512at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032981">
        <property type="term" value="P:mitochondrial respiratory chain complex I assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012576">
        <property type="entry name" value="NDUFB3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15082:SF2">
        <property type="entry name" value="NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15082">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08122">
        <property type="entry name" value="NDUF_B12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW26102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="68" mass="7759" checksum="03D44149BCC72B7E" modified="2014-02-19" version="1">MGSGKNTAEFFRRRDAWRKHPLLTNQFRHATPGLGIALVAFGFYLVGEQVYDRLNADSHAHVKAENHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7I2</accession>
    <name>V7C7I2_PHAVU</name>
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        <recommendedName>
            <fullName evidence="9">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G090800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DnaX/STICHEL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7I2"/>
    <dbReference type="SMR" id="V7C7I2"/>
    <dbReference type="STRING" id="3885.V7C7I2"/>
    <dbReference type="Gramene" id="ESW26099">
        <property type="protein sequence ID" value="ESW26099"/>
        <property type="gene ID" value="PHAVU_003G090800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0989">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWEDELN"/>
    <dbReference type="OrthoDB" id="1911163at2759"/>
    <dbReference type="PhylomeDB" id="V7C7I2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005663">
        <property type="term" value="C:DNA replication factor C complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003689">
        <property type="term" value="F:DNA clamp loader activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18137">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000013">
        <property type="entry name" value="DNA polymerase III subunit gamma/tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000014">
        <property type="entry name" value="DNA polymerase III subunit gamma/tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022754">
        <property type="entry name" value="DNA_pol_III_gamma-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012763">
        <property type="entry name" value="DNA_pol_III_sug/sutau_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050238">
        <property type="entry name" value="DNA_Rep/Repair_Clamp_Loader"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054506">
        <property type="entry name" value="DnaA_N-like_STI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045085">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02397">
        <property type="entry name" value="dnaX_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669:SF63">
        <property type="entry name" value="PROTEIN STICHEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11669">
        <property type="entry name" value="REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13177">
        <property type="entry name" value="DNA_pol3_delta2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12169">
        <property type="entry name" value="DNA_pol3_gamma3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23007">
        <property type="entry name" value="DnaA_N-like_STI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22608">
        <property type="entry name" value="DNAX_ATPase_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="post-AAA+ oligomerization domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="9">
        <location>
            <begin position="501"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="22"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="94"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="399"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="821"/>
            <end position="908"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1025"/>
            <end position="1084"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1162"/>
            <end position="1184"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="777"/>
            <end position="807"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="32"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="54"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="65"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="99"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="821"/>
            <end position="838"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="845"/>
            <end position="855"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="877"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1038"/>
            <end position="1048"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1072"/>
            <end position="1084"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1162"/>
            <end position="1173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW26099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1252" mass="138984" checksum="B03C71A2372F0913" modified="2014-02-19" version="1">MSEMRVSELHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAWNRDSGSRRFSTTSQLPNNEKEKEKEKEKEKEREKKVFLYNWKNYKSSSEKYNEEEDDDDGDDGGSSSLLGDRDRDSLSDARNGCDSKSDSYLAAGGTGGGGGTRSSIFRCGDANLVSRRTVPVKKKSKKNNPHLDFLAKCQQHRQTNPGRNFVSSSKALLEGHSSLPFFSRDESVEFSDDTEDYTNSEGVRPISGTSPLLFKLRQKNWSRSSSKFLRRSRKEDSSYSYSTPALSTSSYNRYGHRYPSTLGSWDGTTTSVNDGDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHKGMCGSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSVSASQKRRLSQRSARGVIPLLTNSGDVREGSSVGTGRSDDELSTNFGELDLEGLSRLDGRRWSSSCRSQEGLEIVALNGEGEEEGTPENSRCFSQKYRPMFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSTARIFSAALNCASPDESKPCGYCRECTDCISGKSSNLLEVDGTNKRGIDKARYLLKRLSTGSSSASLQYTVFVIDECHLLPSKTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTQENLDVEADALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTVETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYAVIDTRPDDSFFGGRSLNESELERLKNALKLLSEAEKQLRTSSERCTWFTATLLQLGSTPSPDLTQSSSSRRQSCKTTEDDPSSVSRDVTSCTHKSDPQYVPRKSAYTGSQQKAVNDDSNHQKESKIEGFSLKSKPSNSPVLDDGSTVVSSDDLMVENTMYRCIDSGKLCDIWVHCIEKCHSKTLRQLLHHHGKLVSVCEVEGVLVAYIAFGDADIKVRAERFLRSITNSMEMVLRRNVEVRIIHLADGEGENKVNLTGVKQGESTVVSEKEQRQGHVNGTESYSSLPPLLDRNLQSRTASSDVLGEGNGGRERKQDNPMHRIESIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQNGVDPMESMDSTRFSSHQHWEDDPNNELKVLTLKNGRVPQKDQTGRKADRFPMSPSLLHDNSLATIPGKEHPGYESGSGAGGCGFLCWNKSKPRRVIKVKGGTPVRARRGAGFTVFGDCGKPKRRERKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8B7</accession>
    <name>V7C8B7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G114800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8B7"/>
    <dbReference type="SMR" id="V7C8B7"/>
    <dbReference type="Gramene" id="ESW26379">
        <property type="protein sequence ID" value="ESW26379"/>
        <property type="gene ID" value="PHAVU_003G114800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTUA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVYHIFS"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051238">
        <property type="entry name" value="GDSL_esterase/lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650">
        <property type="entry name" value="GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45650:SF4">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755367" description="GDSL esterase/lipase" evidence="8">
        <location>
            <begin position="23"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="361" mass="39108" checksum="F9799D25EA341BA7" modified="2014-02-19" version="1">MGILLNLLPLFIVLVLFKVSTSDHLPAATFVFGDSLVDVGNNNYLISFSKANYVPNGIDFGRPTGRFTNGRTIVDIIGQELGTDLTPPYLAPTTVGPVILKGVNYASGGGGILNSTGQAFGGRLNFDAQIDYFANTRQDIISSIGVPAALNLFNRSLFSVSIGSNDFINNYLTPTLPFSERKTVSPEFFVAEMISKFRVQLTRLFNLGARKVVVANVGPVGCIPSQRDANQGAGDSCISFPNQLAQLFNSQLKDLVAELNSNLEGSAFVHADVYQILNDILQNYVALGFVNPSSACCHVAGRFGGLVPCGPSSKICWDRSKYVFWDPYHPSDAANIIVAKHLLDGASNYIWPSNIRRLFQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAW3</accession>
    <name>V7CAW3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cas1p 10 TM acyl transferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G117800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PC-esterase family. CASD1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAW3"/>
    <dbReference type="STRING" id="3885.V7CAW3"/>
    <dbReference type="Gramene" id="ESW26410">
        <property type="protein sequence ID" value="ESW26410"/>
        <property type="gene ID" value="PHAVU_003G117800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1699">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QSLLHEW"/>
    <dbReference type="OrthoDB" id="1932925at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016407">
        <property type="term" value="F:acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009834">
        <property type="term" value="P:plant-type secondary cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045492">
        <property type="term" value="P:xylan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012419">
        <property type="entry name" value="Cas1_AcylTrans_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13533">
        <property type="entry name" value="N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13533:SF48">
        <property type="entry name" value="PROTEIN REDUCED WALL ACETYLATION 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07779">
        <property type="entry name" value="Cas1_AcylT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="140"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="236"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="378"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="408"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="437"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="479"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="518"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="domain" description="Cas1p 10 TM acyl transferase" evidence="9">
        <location>
            <begin position="104"/>
            <end position="519"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW26410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="546" mass="63487" checksum="DF87E3B0CF81F415" modified="2014-02-19" version="1">MLILSPVTPGQVSFLLGITPVVVAWIYSEILEYRKNSVSSKAGHSDINLVEMGSDAVKDEDKAVLLEGGALQSGSPRARSLTASPSIIRFLLMDNYFLLENRLTLRAMSEFGLLLAYFYLCDRTDFFASSKKSYNRDIFLFLYFLLIIVSAMTSFKIHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFCCIVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKIIACFLVVILVWEIPGVFELLWSPFTFFLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRISIKATIVLICSLVGYLWFEHIYKLDKLTYNTYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISCRLFDLTNTLKVAFVPSKDDKRLVHNLITATTISVVLYSLSFGFLRLPQMLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB48</accession>
    <name>V7CB48_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">adenylate dimethylallyltransferase (ADP/ATP-dependent)</fullName>
            <ecNumber evidence="10">2.5.1.112</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G093100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>dimethylallyl diphosphate + ADP = N(6)-(dimethylallyl)adenosine 5'-diphosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:36327"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:73533"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.5.1.112"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>dimethylallyl diphosphate + ATP = N(6)-(dimethylallyl)adenosine 5'-triphosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:36331"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:73532"/>
            <dbReference type="EC" id="2.5.1.112"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the IPP transferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.112" evidence="10"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB48"/>
    <dbReference type="SMR" id="V7CB48"/>
    <dbReference type="STRING" id="3885.V7CB48"/>
    <dbReference type="Gramene" id="ESW26126">
        <property type="protein sequence ID" value="ESW26126"/>
        <property type="gene ID" value="PHAVU_003G093100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1384">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCNLATR"/>
    <dbReference type="OrthoDB" id="775260at2759"/>
    <dbReference type="PhylomeDB" id="V7CB48"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009824">
        <property type="term" value="F:AMP dimethylallyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052622">
        <property type="term" value="F:ATP/ADP dimethylallyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052381">
        <property type="term" value="F:tRNA dimethylallyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009691">
        <property type="term" value="P:cytokinin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.890:FF:000002">
        <property type="entry name" value="Adenylate isopentenyltransferase 5, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.890">
        <property type="entry name" value="Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039657">
        <property type="entry name" value="Dimethylallyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088:SF74">
        <property type="entry name" value="ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088">
        <property type="entry name" value="TRNA DIMETHYLALLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01715">
        <property type="entry name" value="IPPT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0203">Cytokinin biosynthesis</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00052386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00055191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00066838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW26126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="327" mass="36465" checksum="CCF848E50917BF3F" modified="2014-02-19" version="1">MNMVSVSAVCKAVGSFNPGVTMETLSFFRQRNKEKVVVIVGATGTGKSKLSIDLATHFPPAEIVNSDKMQVYEGLDITTNKVTEEECRGVPHHLLGTVQSNMDFSVNDFCHHATLAVGSILKRDGLPIIAGGSNSFLDALVNHYPDFRLRYHCLFLWVDVSLPVLHSSLSARVDRMIRAGQVDEVRQFFQYHNDDYTVGIRKAIGVPEFHSFFQAEADGADERTKDKLLQAAIASIKINNCNLATRQRHKIHRLHAIFKRNMHRLDATDVFLRSTPQEAEQAWEDHVLSKSRRILHNFLYDDTHVDVALASVIASSSPPMAAAAATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBH0</accession>
    <name>V7CBH0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G211500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBH0"/>
    <dbReference type="STRING" id="3885.V7CBH0"/>
    <dbReference type="Gramene" id="ESW27547">
        <property type="protein sequence ID" value="ESW27547"/>
        <property type="gene ID" value="PHAVU_003G211500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU0G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ITNIAPC"/>
    <dbReference type="OrthoDB" id="1896682at2759"/>
    <dbReference type="PhylomeDB" id="V7CBH0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045492">
        <property type="term" value="P:xylan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006514">
        <property type="entry name" value="IRX15/GXM/AGM"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01627">
        <property type="entry name" value="A_thal_3515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31444">
        <property type="entry name" value="OS11G0490100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21729">
        <property type="entry name" value="IRX15_IRX15L_GXM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="36631" checksum="AB9B5430E96B3845" modified="2014-02-19" version="1">MPPDVLHFRPLLSPLVQFSPSLTSPAQENHICCVHKYWQGRKGMNLTKKKLIPILVFILSVISILRLLSLNVKTSPFSTGISALFPAPQHNCSSPLSTCNKIASPTPGSSDQPRKPPNTTTTLTEKEFKVLSDLIALKSPCNLLIFGFQPQYLILSNMNAAGSTIFLDDDPDKISKVRINSNNTQIYRFEYNTPTKAGYKLLQHARQNPAACVPNPRFLQKSKCKLALKNLPLQVYEKNWDVMVVDGPSGGSPESPGRMGSIYTTSVLARAGNTSDVIVHDVDRIIEKWFSWEFLCDENLLYSKGKLWHFRIRGLSNSTRFCPVEVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD49</accession>
    <name>V7CD49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G188300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD49"/>
    <dbReference type="SMR" id="V7CD49"/>
    <dbReference type="STRING" id="3885.V7CD49"/>
    <dbReference type="Gramene" id="ESW27283">
        <property type="protein sequence ID" value="ESW27283"/>
        <property type="gene ID" value="PHAVU_003G188300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DRKFYYD"/>
    <dbReference type="OrthoDB" id="1585145at2759"/>
    <dbReference type="PhylomeDB" id="V7CD49"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000910">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At5g14080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47938:SF9">
        <property type="entry name" value="OS10G0422300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47938">
        <property type="entry name" value="RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="216"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="293"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="494" mass="55989" checksum="913D1AD9214A6A5E" modified="2014-02-19" version="1">MRFMMHVLLKPAWKRSWSKAMSAQNLQIVAFSQYSTLLPISVSPQLQELCSVVVSTVGGLDDLEFSLNKFKDSLTSSLVAQAIDSSKHEAHTRRLLRFFLWSSKNLSHSLENKDYNHALRVFAEKNDYTAMDILMEDLKKEGRVMDAETFGLVADTLVKLGKEDQALGVFKNLDKYKCSIDEFTVTAIINALCSKGHAKRAEGVVWHHRDKITGAKPCIYRSLLYGWSVQRNVKEARRIIKEMKANGVTPDLLCYNTFLRCLCERNLRHNPSGLVPEALNVMMEMRSCRVFPTPISYNILLSCLGKTRRVKESCQILETMTNGGCDPDWVSYYLVAKVLFLSGRFGKGKDIVDQMIGKGLMPNHKFYYSLIGILCGVERVNHALELFEKMKKNSMGGYGPVYDVLIPKLCTGGNFEKGRELWDEATSMGIILQCSEDVLDPSITQVYKPTKPEKISLVDSSVAKSPHKVKKFVRKMKMRKKYAATKKKKKFTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEW0</accession>
    <name>V7CEW0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cysteine-rich transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G234200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CYSTM1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEW0"/>
    <dbReference type="STRING" id="3885.V7CEW0"/>
    <dbReference type="Gramene" id="ESW27810">
        <property type="protein sequence ID" value="ESW27810"/>
        <property type="gene ID" value="PHAVU_003G234200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S205">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAKWCCG"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028144">
        <property type="entry name" value="CYSTM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044850">
        <property type="entry name" value="WIH1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31568:SF21">
        <property type="entry name" value="CYSTM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31568">
        <property type="entry name" value="RCG49325, ISOFORM CRA_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12734">
        <property type="entry name" value="CYSTM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Cysteine-rich transmembrane" evidence="7">
        <location>
            <begin position="54"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="48"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW27810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="87" mass="9463" checksum="42CC62B55EF9685B" modified="2014-02-19" version="1">MSYYDHQQYPPVGVPPPQGYPAKDPYPPPGYPAQQGYPPAGYPPQGYPPQGYAPQYAQQPPPPRQETGFLEGCLAALCCCCLLDACF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CID3</accession>
    <name>V7CID3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein SMG9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G039600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SMG9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CID3"/>
    <dbReference type="SMR" id="V7CID3"/>
    <dbReference type="STRING" id="3885.V7CID3"/>
    <dbReference type="Gramene" id="ESW29050">
        <property type="protein sequence ID" value="ESW29050"/>
        <property type="gene ID" value="PHAVU_002G039600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4181">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASVCHIL"/>
    <dbReference type="OrthoDB" id="79514at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000184">
        <property type="term" value="P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039177">
        <property type="entry name" value="SMG9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14270">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY FACTOR SMG9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14270:SF0">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY FACTOR SMG9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0866">Nonsense-mediated mRNA decay</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="396" mass="43691" checksum="768A07651727F187" modified="2014-02-19" version="1">MAGSEPSPSPKILLAKPGLVTGGPVAGKFGRGGAGDDDSVQLRSRFPSVASLNLLSDSWDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFAVQSEETRAMARHCSPGVEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISVIGGETMPAELAHELMGIQLAVLLASICHIVLVVSEGVRDDSMWQLMLTVDLLKHGISDPSLMAASLSQSSSSGLEKDKHPEHKEYVATPVFVHTKLQDQDFSPNKFVQLKKALMQYFRPSSFVRQHAGNKPEEHVLSSTVRGSQMESNLLKLYAIPLKKIDENPRAQHESYVSALWKLRDQILSMKSPSFTRSVSEREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJE8</accession>
    <name>V7CJE8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transposase-associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G068800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJE8"/>
    <dbReference type="Gramene" id="ESW29415">
        <property type="protein sequence ID" value="ESW29415"/>
        <property type="gene ID" value="PHAVU_002G068800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SYFB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEHAFAY"/>
    <dbReference type="OrthoDB" id="1433848at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029480">
        <property type="entry name" value="Transpos_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13963">
        <property type="entry name" value="Transpos_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transposase-associated" evidence="1">
        <location>
            <begin position="5"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="13442" checksum="B1AF8FDA22FA3FE9" modified="2014-02-19" version="1">MPIDKSWNSKPRNTIEYENGLNEFLEFAFGHVNGVVIKCPCSKCGFNKWQTRDVVQEHLTCSTFPQNYQTWYMHGEGLSGNEYVVIPRAHVIEDVIESHNPMEDMLNDAFGFMGAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJK2</accession>
    <name>V7CJK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">threonine--tRNA ligase</fullName>
            <ecNumber evidence="3">6.1.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Threonyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G072800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>tRNA(Thr) + L-threonine + ATP = L-threonyl-tRNA(Thr) + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24624"/>
            <dbReference type="Rhea" id="RHEA-COMP:9670"/>
            <dbReference type="Rhea" id="RHEA-COMP:9704"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78534"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.3" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJK2"/>
    <dbReference type="SMR" id="V7CJK2"/>
    <dbReference type="STRING" id="3885.V7CJK2"/>
    <dbReference type="Gramene" id="ESW29470">
        <property type="protein sequence ID" value="ESW29470"/>
        <property type="gene ID" value="PHAVU_002G072800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1637">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMNQRLW"/>
    <dbReference type="OrthoDB" id="5423599at2759"/>
    <dbReference type="PhylomeDB" id="V7CJK2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004829">
        <property type="term" value="F:threonine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006435">
        <property type="term" value="P:threonyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01667">
        <property type="entry name" value="TGS_ThrRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00860">
        <property type="entry name" value="ThrRS_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00771">
        <property type="entry name" value="ThrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.930.10:FF:000213">
        <property type="entry name" value="Probable threonine--tRNA ligase, cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.930.10:FF:000198">
        <property type="entry name" value="Threonine--tRNA ligase mitochondrial 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.800:FF:000019">
        <property type="entry name" value="Threonine--tRNA ligase mitochondrial 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.30:FF:000006">
        <property type="entry name" value="Threonine--tRNA ligase, cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.980.10:FF:000005">
        <property type="entry name" value="Threonyl-tRNA synthetase, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="entry name" value="Anticodon-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.980.10">
        <property type="entry name" value="Threonyl-trna Synthetase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00184">
        <property type="entry name" value="Thr_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002320">
        <property type="entry name" value="Thr-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047246">
        <property type="entry name" value="ThrRS_anticodon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033728">
        <property type="entry name" value="ThrRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00418">
        <property type="entry name" value="thrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11451:SF46">
        <property type="entry name" value="THREONINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11451">
        <property type="entry name" value="THREONINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01047">
        <property type="entry name" value="TRNASYNTHTHR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="TGS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="ThrRS/AlaRS common domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGS" evidence="13">
        <location>
            <begin position="71"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="12">
        <location>
            <begin position="339"/>
            <end position="605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW29470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="707" mass="81462" checksum="C3F8579494039BB5" modified="2014-02-19" version="1">MLYSLIRLRRYASPHSPLLRLPINRFSSAVAAMVAHAKDDAYLQAAIPKRIQLFQTIQAEQQTQRLSLSPDPIKVNLPDGGVREAKKWLTTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEEDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAGALKAVAEKQPFERIEVTRDQALEMFSDNKFKIEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGNKERESLQRVYGISYPDQKSLKEYLHRLEEAKKYDHRILGVKQELILHHEWSPGSWFFLPHGTHVYNKLMDFIRNQYRDRGYQEVISPNVFNMDLWVQSGHAANYREDMFILEIEKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRNALSFINYVYNIFGFSYELKLSTRPEKYLGDIATWDKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYALQVRDQIHQAGYQVDADTTDRKIQKKVREAQLAQFNYILVVGEEEANTGQVSVRVRDKGDHKVMSIEDLLKHFRDEAAAFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK43</accession>
    <name>V7CK43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G087000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNAP-25 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK43"/>
    <dbReference type="SMR" id="V7CK43"/>
    <dbReference type="STRING" id="3885.V7CK43"/>
    <dbReference type="Gramene" id="ESW29637">
        <property type="protein sequence ID" value="ESW29637"/>
        <property type="gene ID" value="PHAVU_002G087000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29638">
        <property type="protein sequence ID" value="ESW29638"/>
        <property type="gene ID" value="PHAVU_002G087000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29640">
        <property type="protein sequence ID" value="ESW29640"/>
        <property type="gene ID" value="PHAVU_002G087000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3065">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EKCCGVC"/>
    <dbReference type="OrthoDB" id="19261at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031201">
        <property type="term" value="C:SNARE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005484">
        <property type="term" value="F:SNAP receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd15841">
        <property type="entry name" value="SNARE_Qc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15861">
        <property type="entry name" value="SNARE_SNAP25N_23N_29N_SEC9N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000031">
        <property type="entry name" value="SNAP25 homologous protein SNAP33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044766">
        <property type="entry name" value="NPSN/SNAP25-like_N_SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19305">
        <property type="entry name" value="SYNAPTOSOMAL ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19305:SF30">
        <property type="entry name" value="TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="225"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="181"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="38"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="55"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="183"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="204"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="290" mass="32081" checksum="9179D322EC8BBD9E" modified="2014-02-19" version="1">MFGSRKTPLREAKPSSVGPVHNPFDSDQESKDKKYNSSKKTLTNTNPFDDGVEVSGHSSSSSYGLSSAHRNRYKNDFRDSGGLESQSVQELEDYAVYKAEETTKSVNSCLKIAEEMREDATKTLVMLHQQGEQITRSHHVAADIDHDLSRGEKLLGSLGGMFSKTWKPKKTGTITGPVVFGDDPVRRKGNHLEQREKLGLTSAPKGQSKSRTTPSESTNAFEKVEVEKGKQDDALSDISDLLGELKDMAIDMGSELGRHNDALNGFDKDMEKLTIRVNGANQRGRHLLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKG7</accession>
    <name>V7CKG7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RCC1-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G067400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKG7"/>
    <dbReference type="SMR" id="V7CKG7"/>
    <dbReference type="STRING" id="3885.V7CKG7"/>
    <dbReference type="Gramene" id="ESW29401">
        <property type="protein sequence ID" value="ESW29401"/>
        <property type="gene ID" value="PHAVU_002G067400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1426">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWGNCRK"/>
    <dbReference type="OrthoDB" id="70707at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058923">
        <property type="entry name" value="RCC1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF466">
        <property type="entry name" value="ANKYRIN REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25390">
        <property type="entry name" value="WD40_RLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="16"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="RCC1-like" evidence="3">
        <location>
            <begin position="18"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="68"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="121"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="176"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="230"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="274"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="336"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="390" mass="41368" checksum="C1BE6CA7D05F301F" modified="2014-02-19" version="1">MEESSKTEIEDEKSEQVVWSWGAGTEGQLGTKIVEDEVFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGEVLSNALFPKAVTSLDGYFITHVAAGWSHSGFVSDTGCVFTCGDGTFGQLGHGDYASHCSPVKLSCFVDQRAVQVACGMRHSLVLMKDCVGNQVYGFGSGKRGQLGVSNDKVKAVNVPRVVSGFEGIEIFGIAANGDHSAAVSVDGHVYTWGRGFKGFEDAYVPHCLSSSLKFIKVALGWNHALAMTGEGEVYILGGNHLGVLSDFQNMSPRSRHIPDLREVNLEKVPGLDGMKISDIAAGAEHSVIVTDNTEIRTWGWGEHGQLGLGDTCDQISPVTVSLGYDLNEVESIKVFCGSGFTFAVTMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKL1</accession>
    <name>V7CKL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Ferredoxin--NADP reductase, chloroplastic</fullName>
            <shortName evidence="15">FNR</shortName>
            <ecNumber evidence="15">1.18.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_002G108000g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14 15">
            <text>2 reduced [2Fe-2S]-[ferredoxin] + NADP(+) + H(+) = 2 oxidized [2Fe-2S]-[ferredoxin] + NADPH</text>
            <dbReference type="Rhea" id="RHEA:20125"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.18.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 15">Plastid</location>
            <location evidence="2 15">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the ferredoxin--NADP reductase type 1 family.</text>
    </comment>
    <dbReference type="EC" id="1.18.1.2" evidence="15"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKL1"/>
    <dbReference type="SMR" id="V7CKL1"/>
    <dbReference type="STRING" id="3885.V7CKL1"/>
    <dbReference type="Gramene" id="ESW29903">
        <property type="protein sequence ID" value="ESW29903"/>
        <property type="gene ID" value="PHAVU_002G108000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1158">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKAWLFM"/>
    <dbReference type="OrthoDB" id="1688044at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004324">
        <property type="term" value="F:ferredoxin-NADP+ reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008266">
        <property type="term" value="F:poly(U) RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06208">
        <property type="entry name" value="CYPOR_like_FNR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000048">
        <property type="entry name" value="Ferredoxin--NADP reductase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.80:FF:000008">
        <property type="entry name" value="Ferredoxin--NADP reductase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015701">
        <property type="entry name" value="FNR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035442">
        <property type="entry name" value="FNR_plant_Cyanobacteria"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43314">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF501178">
        <property type="entry name" value="FNR-PetH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000361">
        <property type="entry name" value="Frd-NADP+_RD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="9 15" id="KW-0274">FAD</keyword>
    <keyword evidence="7 15" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10 15 16" id="KW-0521">NADP</keyword>
    <keyword evidence="13 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="18">
        <location>
            <begin position="83"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="13"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <begin position="252"/>
            <end position="253"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <begin position="282"/>
            <end position="283"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <begin position="321"/>
            <end position="322"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="360"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR000361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR000361-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW29903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="362" mass="40572" checksum="A5077617BB8A790B" modified="2014-02-19" version="1">MATAVTAAVSFPASKSTSLPSRTSVTSPDRILFKKLSLQYRDVSVSGRVVSVRAQVTTEAPAKVEKESKKQDEGLIVNKFKPKDPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEVKITGPIGKEMLMPKDPNATVVMLATGTGIAPFRSFLWKMFFEKHDDYRFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIDYKRQLKKAEQWNVEVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLV1</accession>
    <name>V7CLV1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">mannitol dehydrogenase</fullName>
            <ecNumber evidence="9">1.1.1.255</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G144700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>D-mannitol + NAD(+) = D-mannose + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15029"/>
            <dbReference type="ChEBI" id="CHEBI:4208"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16899"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.255"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.255" evidence="9"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLV1"/>
    <dbReference type="SMR" id="V7CLV1"/>
    <dbReference type="STRING" id="3885.V7CLV1"/>
    <dbReference type="Gramene" id="ESW30338">
        <property type="protein sequence ID" value="ESW30338"/>
        <property type="gene ID" value="PHAVU_002G144700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0023">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DMPLAQY"/>
    <dbReference type="OrthoDB" id="1879366at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046029">
        <property type="term" value="F:mannitol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009809">
        <property type="term" value="P:lignin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd05283">
        <property type="entry name" value="CAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000022">
        <property type="entry name" value="Cinnamyl alcohol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000100">
        <property type="entry name" value="Putative cinnamyl alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000126">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047109">
        <property type="entry name" value="CAD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42683">
        <property type="entry name" value="ALDEHYDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Enoyl reductase (ER)" evidence="11">
        <location>
            <begin position="20"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00056693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="358" mass="38669" checksum="07DB8D9A9705A1D8" modified="2014-02-19" version="1">MAETEHPRKAFGWAARDPSGLLTPFHFSRRETGEKDVAFKVLYCGICHSDLHFAKNEWGTSTYPLVPGHEIAGVVTEVGSKVVKFKVGDKVGVGCMVDSCHTCLNCVDNLENYCPQYTLTYSAKYRDGTITYGGFSDSMVVDEHFVIRIPDGLPLEAAAPLLCAGITVFSPLRYFALDKPGLNVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAMQHLGADSFIISRDPDQMQAANGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVAVGAPEKPLELSIISLILGRKIVAGSKIGGMKETQEIMDFAVLHNVKPDIEIIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM42</accession>
    <name>V7CM42_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Phosphoserine aminotransferase</fullName>
            <ecNumber evidence="13">2.6.1.52</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_002G115000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Involved in the plastidial phosphorylated pathway of serine biosynthesis (PPSB). Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4-(phosphooxy)-L-threonine + 2-oxoglutarate = (R)-3-hydroxy-2-oxo-4-phosphooxybutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:16573"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58452"/>
            <dbReference type="ChEBI" id="CHEBI:58538"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 13">
            <text>O-phospho-L-serine + 2-oxoglutarate = 3-phosphooxypyruvate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:14329"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57524"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 13">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.52" evidence="13"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM42"/>
    <dbReference type="SMR" id="V7CM42"/>
    <dbReference type="STRING" id="3885.V7CM42"/>
    <dbReference type="Gramene" id="ESW29981">
        <property type="protein sequence ID" value="ESW29981"/>
        <property type="gene ID" value="PHAVU_002G115000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2790">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFVYFCD"/>
    <dbReference type="OrthoDB" id="1703350at2759"/>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004648">
        <property type="term" value="F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00611">
        <property type="entry name" value="PSAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000010">
        <property type="entry name" value="Phosphoserine aminotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1150.10:FF:000006">
        <property type="entry name" value="Phosphoserine aminotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00160">
        <property type="entry name" value="SerC_aminotrans_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022278">
        <property type="entry name" value="Pser_aminoTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003764">
        <property type="entry name" value="PRK05355.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01364">
        <property type="entry name" value="serC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43247">
        <property type="entry name" value="PHOSPHOSERINE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43247:SF1">
        <property type="entry name" value="PHOSPHOSERINE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000525">
        <property type="entry name" value="SerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 13" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 13" id="KW-0718">Serine biosynthesis</keyword>
    <keyword evidence="6 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotransferase class V" evidence="15">
        <location>
            <begin position="54"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00058115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW29981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="411" mass="45331" checksum="91D816277413CE12" modified="2014-02-19" version="1">MSMATSPHTTLFQTRTTPFPLSSPRPTSFKPTSIKCATQLHTQPPPLTHSQDRVFNFAAGPATLPEKVLLRAQSELYNWGGSGMSVMEMSHRGKEFLSIIQKAESDLRALLQIPPEYSVLFLQGGATSQFAALPLNLCSPNDAVDYIVTGSWSDKAVKEAQKYCKPNVIWSGKSEKYTKIPSFDDLKQNPGSGYLHFCANETIHGVEFKEYPVAQSGVLVADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIVRKDLIGNAQALTPLMFDYKIHDDNNSLYNTPPCYGIYMCGLVFEDLLEQGGLMEVEKKNKKKADILYNAIDGSKGFYRCPVEKSVRSLMNVPFTLEKSELEGEFIKEAAKEKMVQLKGHRSVGGVRASIYNAMPLAGVEKLVAFMKDFQVRHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPP2</accession>
    <name>V7CPP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Rapid ALkalinization Factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G229400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant rapid alkalinization factor (RALF) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPP2"/>
    <dbReference type="STRING" id="3885.V7CPP2"/>
    <dbReference type="Gramene" id="ESW31328">
        <property type="protein sequence ID" value="ESW31328"/>
        <property type="gene ID" value="PHAVU_002G229400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8YN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDISINH"/>
    <dbReference type="OrthoDB" id="1863600at2759"/>
    <dbReference type="PhylomeDB" id="V7CPP2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005179">
        <property type="term" value="F:hormone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019722">
        <property type="term" value="P:calcium-mediated signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0040008">
        <property type="term" value="P:regulation of growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008801">
        <property type="entry name" value="RALF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33136:SF89">
        <property type="entry name" value="PROTEIN RALF-LIKE 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33136">
        <property type="entry name" value="RAPID ALKALINIZATION FACTOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05498">
        <property type="entry name" value="RALF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0372">Hormone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755964" description="Rapid ALkalinization Factor" evidence="7">
        <location>
            <begin position="23"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="108" mass="11902" checksum="7E60E6E3BD941C83" modified="2014-02-19" version="1">MKCKVWLSFLLLAMALAMVAEASKVHEFGFPGAGMDLVGDDNEMQLDSESNRRTLAGREQYISYGALNANQAPCGNRGNSYYNCQDRGRANPYSRGCSQITHCARDTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPW6</accession>
    <name>V7CPW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S ribosomal protein L32-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G236400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPW6"/>
    <dbReference type="SMR" id="V7CPW6"/>
    <dbReference type="STRING" id="3885.V7CPW6"/>
    <dbReference type="Gramene" id="ESW31408">
        <property type="protein sequence ID" value="ESW31408"/>
        <property type="gene ID" value="PHAVU_002G236400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0878">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENCAHEF"/>
    <dbReference type="OrthoDB" id="268693at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00513">
        <property type="entry name" value="Ribosomal_L32_L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001515">
        <property type="entry name" value="Ribosomal_eL32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036351">
        <property type="entry name" value="Ribosomal_eL32_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23413">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23413:SF16">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L32-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01655">
        <property type="entry name" value="Ribosomal_L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01393">
        <property type="entry name" value="Ribosomal_L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52042">
        <property type="entry name" value="Ribosomal protein L32e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="133" mass="15549" checksum="383FF84107021E37" modified="2014-02-19" version="1">MAVPLLSKKVVKKRVKRFKRPQCDRKISVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKRTLHYLPNGFKKFVVSNVKDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQK2</accession>
    <name>V7CQK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Trehalose 6-phosphate phosphatase</fullName>
            <ecNumber evidence="8">3.1.3.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G254600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23420"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16551"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58429"/>
            <dbReference type="EC" id="3.1.3.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Glycan biosynthesis; trehalose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the trehalose phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.12" evidence="8"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQK2"/>
    <dbReference type="SMR" id="V7CQK2"/>
    <dbReference type="STRING" id="3885.V7CQK2"/>
    <dbReference type="Gramene" id="ESW31633">
        <property type="protein sequence ID" value="ESW31633"/>
        <property type="gene ID" value="PHAVU_002G254600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1050">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QGPTRDS"/>
    <dbReference type="OrthoDB" id="411251at2759"/>
    <dbReference type="UniPathway" id="UPA00299"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004805">
        <property type="term" value="F:trehalose-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01627">
        <property type="entry name" value="HAD_TPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1020:FF:000004">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000073">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000099">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044651">
        <property type="entry name" value="OTSB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00685">
        <property type="entry name" value="T6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768:SF3">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="366" mass="41683" checksum="9AC5685442396E4A" modified="2014-02-19" version="1">MTQQNVVLSKTKSGINRDLTVAQKPPAAPGGYIPIPRRRVLKNLEINGGQRINAWVDSMRASSPTQAKSTSSFAEEHSSWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIQGPTRDSKYSNKDKGEPLLFQPASEFLPMIDEVYNQLVEKMKSIPGARVENNKFCASVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFMKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKQVSLRLRAHSRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTH5</accession>
    <name>V7CTH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G069900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTH5"/>
    <dbReference type="SMR" id="V7CTH5"/>
    <dbReference type="STRING" id="3885.V7CTH5"/>
    <dbReference type="Gramene" id="ESW33444">
        <property type="protein sequence ID" value="ESW33444"/>
        <property type="gene ID" value="PHAVU_001G069900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRAKMID"/>
    <dbReference type="OrthoDB" id="544400at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 13" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="15"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW33444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="351" mass="39870" checksum="9B6B093B337044A2" modified="2014-02-19" version="1">MLIRYTYKEIKKMATGFNEKLGEGGYGSVFKGKLRSEPSVAIKVLRKSKGNGQDFINEVATIGRIHHQNVVQLIGYCAEGSKRALVYEFMPNGSLDKFIFSSEGNTHLTYDTIYNIAMGVAHGITYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPIDKSVVTMTAARGTIGYMAPELFYTNIGKISDKSDVYSFGMLLMEIASKRKNLNPHAERSSQLYFPFWIYDQLDKEKDIEMEDVIEEEKKIAKKLMIVSLWCIQLKPNDRPSINKVVEMLEGDIENLKIPPKPSLYPHETLEKLCSNQTTLPQFISSSTNSMEIATNAPLDESTLQENHHEIETNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTL5</accession>
    <name>V7CTL5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G073400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTL5"/>
    <dbReference type="Gramene" id="ESW33484">
        <property type="protein sequence ID" value="ESW33484"/>
        <property type="gene ID" value="PHAVU_001G073400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDJ4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VTVSKPW"/>
    <dbReference type="OrthoDB" id="1436082at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="122" mass="13938" checksum="EB522BDB709D2461" modified="2014-02-19" version="1">MFPNLDLILLTLLHASFVIFVLLLVIFIILLLFSVAFFLGLSSVFLFDLHHFSSLLSQYFNMVKDDLELGGVLVLLSLTHQAVDFVTVSKPWQKRNKLGEFGGNKAQKYSKRHYIHGLKNVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTX9</accession>
    <name>V7CTX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G314800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AB hydrolase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTX9"/>
    <dbReference type="SMR" id="V7CTX9"/>
    <dbReference type="STRING" id="3885.V7CTX9"/>
    <dbReference type="Gramene" id="ESW32351">
        <property type="protein sequence ID" value="ESW32351"/>
        <property type="gene ID" value="PHAVU_002G314800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUXK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AVAWDMP"/>
    <dbReference type="OrthoDB" id="408373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000042">
        <property type="entry name" value="probable strigolactone esterase DAD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43039">
        <property type="entry name" value="ESTERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="3">
        <location>
            <begin position="23"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="29860" checksum="4E7F5048DA86F0B1" modified="2014-02-19" version="1">MGSTKRWIWEAMNARSEGSGTETLVLAHGYGMDQSVWDKVVPLLVENYRVVTFDWACAVKKNEKLYDPVKYSSYEAFADDLISLLQEMDLKAVTFVGSSMSGIIGCIASVKTPQLFKTLILVGSSPRFLNSDDYEGGFNRSEVEQLLSNIENNYENFASAFASLIADPSNEESVKKYEEGLKNMGGEVGLSLAKTIFYSDWREMVEKVETPCTIIQTKKDAAVPHSVALYMQNKIKGKVTLQIIDTLGHFPQLSAHLQFVQVLKAALGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUZ9</accession>
    <name>V7CUZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Hexosyltransferase</fullName>
            <ecNumber evidence="14">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_001G049900g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 14">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 14">Golgi apparatus membrane</location>
            <topology evidence="2 14">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 14">Belongs to the glycosyltransferase 31 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="14"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUZ9"/>
    <dbReference type="SMR" id="V7CUZ9"/>
    <dbReference type="Gramene" id="ESW33188">
        <property type="protein sequence ID" value="ESW33188"/>
        <property type="gene ID" value="PHAVU_001G049900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2288">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSHLNRN"/>
    <dbReference type="OrthoDB" id="1158011at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990714">
        <property type="term" value="F:hydroxyproline O-galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010405">
        <property type="term" value="P:arabinogalactan protein metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000023">
        <property type="entry name" value="Hexosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025298">
        <property type="entry name" value="DUF4094"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002659">
        <property type="entry name" value="Glyco_trans_31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214:SF124">
        <property type="entry name" value="HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13334">
        <property type="entry name" value="DUF4094"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01762">
        <property type="entry name" value="Galactosyl_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 14" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10 14" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="12 14" id="KW-0464">Manganese</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="DUF4094" evidence="15">
        <location>
            <begin position="21"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00059326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU363063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF13334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW33188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="38451" checksum="97F85B1F8ADC3CF1" modified="2014-02-19" version="1">MDTLPTTKRGGGGRSKPVPTSKSSLVMAFFSCVAWLYVAGRLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLERRIVEAEMELTLAKSQGYLKGQGQKSGSSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDEENRSTKDFLILEGHEEAQEELPKKVKTFFSTAVQNWDADFYVKVDDNIDIDLEGLIELLEHRRGQDGAYIGCMKSGDVISEDGKPWYEPDWWKFGDEKSYFRHAGGSLVIISKNLAQYININSASLKTYAFDDTSLGSWMMGIQATYIDDSRLCCSSVRQEKVCSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXR9</accession>
    <name>V7CXR9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G123600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXR9"/>
    <dbReference type="Gramene" id="ESW34090">
        <property type="protein sequence ID" value="ESW34090"/>
        <property type="gene ID" value="PHAVU_001G123600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRQSTWW"/>
    <dbReference type="OrthoDB" id="655540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015179">
        <property type="term" value="F:L-amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF701">
        <property type="entry name" value="AMINO ACID TRANSPORTER AVT1A-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="271"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="334"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="367"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="9">
        <location>
            <begin position="150"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="35"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="53"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW34090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="47299" checksum="D967B1C779AECB6B" modified="2014-02-19" version="1">MANKENNERETHFFVDNFNEGVSEEHNTEAADYMSENSNQCDTDDEGNRRTHPQPSFISQQWPQTYRDATDSYSIAAAPNLESIIRAPSVIYSSFIGLGSKSYLEHDERTSFLSGEELAHAGITRRQSTWWEKASIKQIPEEFPIEYGCSLSQTIFNGINVMAGVGLLSTPYTVKQAGWTSMIVMFFFAIVCCYTADLMKHCFESQEGIISYPDIGEAAFGRYGRLIISVILYIELYSYCVEFIILEGDNLTGLFPGTSLHLGSLQLDSKHLFGILTALIILPTVWLKDLRIIAYLSAGGVVSTALIILCVFLVGTRDDVGFHHSGPLLNWNGLPFAFGIYGFCFAGHSVFPNLYQSMADKKEFTKAVVVSFILCTFVYGSSAVMGFLMFGEGTLSQITLNLPPNALASKVALWTIVISPLTKYPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYG3</accession>
    <name>V7CYG3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Hexosyltransferase</fullName>
            <ecNumber evidence="12">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G215300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>myo-inositol + UDP-alpha-D-galactose = alpha-D-galactosyl-(1-&gt;3)-1D-myo-inositol + UDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12464"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17268"/>
            <dbReference type="ChEBI" id="CHEBI:17505"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:66914"/>
            <dbReference type="EC" id="2.4.1.123"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase 8 family. Galactosyltransferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="12"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYG3"/>
    <dbReference type="SMR" id="V7CYG3"/>
    <dbReference type="STRING" id="3885.V7CYG3"/>
    <dbReference type="Gramene" id="ESW35202">
        <property type="protein sequence ID" value="ESW35202"/>
        <property type="gene ID" value="PHAVU_001G215300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1950">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WRRTDQT"/>
    <dbReference type="OrthoDB" id="2014201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047216">
        <property type="term" value="F:inositol 3-alpha-galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02537">
        <property type="entry name" value="GT8_Glycogenin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000049">
        <property type="entry name" value="Hexosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050587">
        <property type="entry name" value="GNT1/Glycosyltrans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11183">
        <property type="entry name" value="GLYCOGENIN SUBFAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0299">Galactose metabolism</keyword>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00050449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU362027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW35202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="38516" checksum="85F8676C99628224" modified="2014-02-19" version="1">MAPELVPTVAKSTASFTSPPILPPRAYVTFLAGNGDYVKGVVGLIKGLRKVKAAYPLVVAVLPDVPEEHREILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENVDHLFDLPDGNFYAVMDCFCEKTWSHTPQYKAGYCQQCPEKVQWPTELGQPPALYFNAGMFLFEPNMVTYHDLLKTLKVTTPTSFAEQDFLNMYFKNIYKPIPVSYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGQEENMQREDIKMLVHKWWDIYNDVSLDYKPLCASETPVDDVDLEPLEPMGHLSKIQGLIVPCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AD87</accession>
    <name>V7AD87_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Purple acid phosphatase</fullName>
            <ecNumber evidence="10">3.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G014800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a phosphate monoester + H2O = an alcohol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15017"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:67140"/>
            <dbReference type="EC" id="3.1.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.2" evidence="10"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AD87"/>
    <dbReference type="SMR" id="V7AD87"/>
    <dbReference type="STRING" id="3885.V7AD87"/>
    <dbReference type="Gramene" id="ESW03449">
        <property type="protein sequence ID" value="ESW03449"/>
        <property type="gene ID" value="PHAVU_011G014800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1378">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWMEMDL"/>
    <dbReference type="OrthoDB" id="45007at2759"/>
    <dbReference type="PhylomeDB" id="V7AD87"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00839">
        <property type="entry name" value="MPP_PAPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.380">
        <property type="entry name" value="Purple acid phosphatase-like, N-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040974">
        <property type="entry name" value="Fn3_PAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041792">
        <property type="entry name" value="MPP_PAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025733">
        <property type="entry name" value="PAPs_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015914">
        <property type="entry name" value="PAPs_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008963">
        <property type="entry name" value="Purple_acid_Pase-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45778:SF3">
        <property type="entry name" value="PURPLE ACID PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45778">
        <property type="entry name" value="PURPLE ACID PHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17808">
        <property type="entry name" value="fn3_PAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14008">
        <property type="entry name" value="Metallophos_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16656">
        <property type="entry name" value="Pur_ac_phosph_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49363">
        <property type="entry name" value="Purple acid phosphatase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 10" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148912" description="Purple acid phosphatase" evidence="10">
        <location>
            <begin position="27"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="domain" description="Purple acid phosphatase Fn3-like" evidence="14">
        <location>
            <begin position="81"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Purple acid phosphatase N-terminal" evidence="13">
        <location>
            <begin position="219"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="11">
        <location>
            <begin position="328"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="domain" description="Purple acid phosphatase C-terminal" evidence="12">
        <location>
            <begin position="572"/>
            <end position="630"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF16656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF17808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW03449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="635" mass="70636" checksum="D7BA7E069EAC8697" modified="2014-02-19" version="1">MESCNWVLKHASILLVFFLSLSCSTSETLTPSLLDFVVTNTTVLHRNFTALSEFRLINRRILSDCSASNPFLKVNVISNSSLSDDEFVTVTVTGVSNPSDSDWVAMISPSNSDVKSCVLNEFFYLQTGDTAKLPLLCHYPVKAQYMINDPSYLGCKNKECKKYENGKCVISTCSGSIKFHVINIRSDIEFVFFSNGFLKPCLVGRSTPVSFANPKQPLYGHLSSTDSTGTSMRLTWVSGDKEPQQIQYANGKAVTSTVSTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSSAFSYKYGSDSVGWSKQNQFSTPPAGGSDELRFIAFGDMGKTPLDASKEHYIQPGALSVIKAIETDVSSNKVNSVFHIGDISYATGFLAEWDFFLNLINPVASRLSYMTAIGNHERDYVNSGSVYVTPDSGGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSKTSEQYKWMQKDMASVNRQKTPWLIFIGHRQMYTSHHGFLASESKFNDAVEALLLQNKVDLALFGHVHNYERTCSVFQHKCKAMPRKDENGVDTYDGRNYSAPVQVVIGMGGFTLDNFSNNVEIWSLKRIVEFGYLRAHATRKNLSVEFVVSSTKEVKDSFQITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADV6</accession>
    <name>V7ADV6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">60S ribosomal protein L7a</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G031900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Component of the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADV6"/>
    <dbReference type="SMR" id="V7ADV6"/>
    <dbReference type="STRING" id="3885.V7ADV6"/>
    <dbReference type="Gramene" id="ESW03664">
        <property type="protein sequence ID" value="ESW03664"/>
        <property type="gene ID" value="PHAVU_011G031900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3166">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHDEVCP"/>
    <dbReference type="OrthoDB" id="29563at2759"/>
    <dbReference type="PhylomeDB" id="V7ADV6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.30:FF:000003">
        <property type="entry name" value="60S ribosomal protein L7a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050257">
        <property type="entry name" value="eL8/uL1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="Ribosomal_eL30-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004037">
        <property type="entry name" value="Ribosomal_eL8-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004038">
        <property type="entry name" value="Ribosomal_eL8/eL30/eS12/Gad45"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018492">
        <property type="entry name" value="Ribosomal_eL8/Nhp2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001921">
        <property type="entry name" value="Ribosomal_eL8_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23105">
        <property type="entry name" value="RIBOSOMAL PROTEIN L7AE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01248">
        <property type="entry name" value="Ribosomal_L7Ae"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00881">
        <property type="entry name" value="L7ARS6FAMILY"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00882">
        <property type="entry name" value="RIBOSOMALL7A"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="L30e-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01082">
        <property type="entry name" value="RIBOSOMAL_L7AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein eL8/eL30/eS12/Gadd45" evidence="6">
        <location>
            <begin position="117"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU367042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="259" mass="29446" checksum="8E4837C1E709E495" modified="2014-02-19" version="1">MAPKRGGKAPALAAKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAEAEGKTIEAKKPINVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFP6</accession>
    <name>V7AFP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G089500g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex. May be involved in lateral roots and nodules formation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFP6"/>
    <dbReference type="STRING" id="3885.V7AFP6"/>
    <dbReference type="Gramene" id="ESW04369">
        <property type="protein sequence ID" value="ESW04369"/>
        <property type="gene ID" value="PHAVU_011G089500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEIDAGA"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1740.10">
        <property type="entry name" value="Amino acid/polyamine transporter I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48017">
        <property type="entry name" value="OS05G0424000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="11" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="120"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="161"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="269"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="309"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="361"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="387"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="416"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="14">
        <location>
            <begin position="36"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00045588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW04369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="456" mass="50322" checksum="2934ECE9E767FCAB" modified="2014-02-19" version="1">MGTLFPDEKSENPNGVQQLHHQNDVDAGALFVLKSEGSWMHCGYHLTTSIVAPTLLSLPYAFSFLGWTAGILSLVIGALVTFYSYNLISRVLEHYAQDGKRQLRFRDMARDILGPRWGRYFVGPIQFVVCFGCVVACTLLGGQCMKAIYLLSNPNGTMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLILSLAYSACATVGSTYIGESSKGPKKDYSLKGDTENRLFGIFNAIAIIATAYGNGIIPEIQATLAPPVKGKMFKGLCICYFVLIVTFFSVSVSGYWAFGNKSEGLILSNFVDNGNPLVPMWFIYMTNIFTITQLSAVGVVYLQTTNEVLEQTFGDPKSPEFSKRNVISRVISRSLAITISTIIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFKPSKRSFIYWLNVTIVVAFFALGAIAAVAAVRQIVLDAKSYQLFANV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI23</accession>
    <name>V7AI23_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G102100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Slow, weak voltage-dependent S-type anion efflux channel involved in maintenance of anion homeostasis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLAC1 S-type anion channel family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI23"/>
    <dbReference type="SMR" id="V7AI23"/>
    <dbReference type="Gramene" id="ESW04523">
        <property type="protein sequence ID" value="ESW04523"/>
        <property type="gene ID" value="PHAVU_011G102100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSGW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEVKGIM"/>
    <dbReference type="OrthoDB" id="1867618at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008308">
        <property type="term" value="F:voltage-gated monoatomic anion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006873">
        <property type="term" value="P:intracellular monoatomic ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09323">
        <property type="entry name" value="TDT_SLAC1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.150:FF:000003">
        <property type="entry name" value="S-type anion channel SLAH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.150">
        <property type="entry name" value="Voltage-dependent anion channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030183">
        <property type="entry name" value="SLAC/SLAH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004695">
        <property type="entry name" value="SLAC1/Mae1/Ssu1/TehA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038665">
        <property type="entry name" value="Voltage-dep_anion_channel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31269:SF22">
        <property type="entry name" value="OS01G0247700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31269">
        <property type="entry name" value="S-TYPE ANION CHANNEL SLAH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03595">
        <property type="entry name" value="SLAC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="148"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="242"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="274"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="304"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="328"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00054248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW04523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="366" mass="41613" checksum="0743ED9FD3353F74" modified="2014-02-19" version="1">MDEKEKQHPQPHIELAIDVSISKTESNCIQFQSVSSILTQFHAEYFRIGLSLTSQAFLLKILIEPIQDVHALRRLFSSIPSSVHTLVWFLALFTLATLSFLYILKCLLHFDMVKNEFLNHVGVNYLFVPWIAWLILLESSPFLSPTTLFFKILWWVFVVPMVMLDVKIYGQWFTKGKRFLSVGANPTSQLSVIGNLVGAQAAAQMGWKESALCMFSLGIVHYLVLFVTLYQRLAGNNSIPSMLRPVFFLFFAAPSMASLAWNSICGKFDTTCKMLFFLSFFLFLSLVSRPMLFKKSMKKFNVAWWAYSFPLTALALASVEYAHEVKGIMAHAIMFVLSSISVLVSLILVIITAVKMSRHVFARFQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJT2</accession>
    <name>V7AJT2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Probable quinone oxidoreductase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G215000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJT2"/>
    <dbReference type="SMR" id="V7AJT2"/>
    <dbReference type="STRING" id="3885.V7AJT2"/>
    <dbReference type="Gramene" id="ESW05852">
        <property type="protein sequence ID" value="ESW05852"/>
        <property type="gene ID" value="PHAVU_011G215000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYANQYP"/>
    <dbReference type="OrthoDB" id="3509362at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035925">
        <property type="term" value="F:mRNA 3'-UTR AU-rich region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070402">
        <property type="term" value="F:NADPH binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003960">
        <property type="term" value="F:quinone reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05286">
        <property type="entry name" value="QOR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000053">
        <property type="entry name" value="Quinone oxidoreductase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047618">
        <property type="entry name" value="QOR-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF008024">
        <property type="entry name" value="PRK10754.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48106">
        <property type="entry name" value="QUINONE OXIDOREDUCTASE PIG3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48106:SF13">
        <property type="entry name" value="QUINONE OXIDOREDUCTASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Enoyl reductase (ER)" evidence="4">
        <location>
            <begin position="11"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00070796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="34420" checksum="5AAD2A5F1B13359B" modified="2014-02-19" version="1">MVKAIRVHQLGGPQVLKWEDVEIGDPKEGEVRVKNKAVGVNFIDVYFRTGVYKVPSLPYTPGVEGVGVVTAVGVGVTGIKVGETVAYSSPPLGSYAEEHILPASNLVPLPPSIDPIIGASIMAKGLTTRYLLQQCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNKLKAAQAKEDGCHHVIIYTEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKLRGYMVSFGQSSGTPDPVPLSSLATKSLFLTRPTLKHYNVTRDELLEAAGELFAKVASGVLKVRITETYPLSEAARAHEDLENRKTTGSVVLLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJT5</accession>
    <name>V7AJT5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Nuclear transcription factor Y subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G211300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the NFYA/HAP2 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJT5"/>
    <dbReference type="SMR" id="V7AJT5"/>
    <dbReference type="STRING" id="3885.V7AJT5"/>
    <dbReference type="Gramene" id="ESW05808">
        <property type="protein sequence ID" value="ESW05808"/>
        <property type="gene ID" value="PHAVU_011G211300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05809">
        <property type="protein sequence ID" value="ESW05809"/>
        <property type="gene ID" value="PHAVU_011G211300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05810">
        <property type="protein sequence ID" value="ESW05810"/>
        <property type="gene ID" value="PHAVU_011G211300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05811">
        <property type="protein sequence ID" value="ESW05811"/>
        <property type="gene ID" value="PHAVU_011G211300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1561">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMELAGH"/>
    <dbReference type="OrthoDB" id="1097733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016602">
        <property type="term" value="C:CCAAT-binding factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.2430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018362">
        <property type="entry name" value="CCAAT-binding_factor_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001289">
        <property type="entry name" value="NFYA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12632">
        <property type="entry name" value="TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02045">
        <property type="entry name" value="CBFB_NFYA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00616">
        <property type="entry name" value="CCAATSUBUNTB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00521">
        <property type="entry name" value="CBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00686">
        <property type="entry name" value="NFYA_HAP2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51152">
        <property type="entry name" value="NFYA_HAP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="26"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="186"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="27"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="195"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="275" mass="30884" checksum="B4BEC699CFFCD970" modified="2014-02-19" version="1">MPGKPDTDDWHEQIQFHPWWRAVGENASKSSSADQLNGSSSVPGTDKTGGCAAKEYQNIKHDMSSIPFTMDKHLAPNPHTEFVGHSVVLTSPYLDAQYGQMLTTYGQQVMINPPLYGMHQARMALPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIRNRKPYLHESRHLHAIRRARGNGGRFLNTKKLENNSSDITSDKGNNGGANPSTNSFHTLHVLSNNENLGSSKTVQDMHRVQSFNNGYHNENGLTALYLPQVNGKKERDPLGAFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKH7</accession>
    <name>V7AKH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptide-methionine (R)-S-oxide reductase</fullName>
            <ecNumber evidence="8">1.8.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G173000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>L-methionyl-[protein] + [thioredoxin]-disulfide + H2O = L-methionyl-(R)-S-oxide-[protein] + [thioredoxin]-dithiol</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.12" evidence="8"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKH7"/>
    <dbReference type="SMR" id="V7AKH7"/>
    <dbReference type="STRING" id="3885.V7AKH7"/>
    <dbReference type="Gramene" id="ESW05358">
        <property type="protein sequence ID" value="ESW05358"/>
        <property type="gene ID" value="PHAVU_011G173000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0856">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RHCINGV"/>
    <dbReference type="OrthoDB" id="44061at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.20:FF:000001">
        <property type="entry name" value="Peptide methionine sulfoxide reductase MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.20">
        <property type="entry name" value="Peptide methionine sulfoxide reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028427">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00357">
        <property type="entry name" value="peptide-methionine (R)-S-oxide reductase MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10173">
        <property type="entry name" value="METHIONINE SULFOXIDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10173:SF52">
        <property type="entry name" value="METHIONINE-R-SULFOXIDE REDUCTASE B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="Mss4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <keyword evidence="3 8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MsrB" evidence="10">
        <location>
            <begin position="77"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="32"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="40"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW05358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="200" mass="22375" checksum="254BA7FBFFCE57F2" modified="2014-02-19" version="1">MASQSLSFPTAHFTCNRVVQKLGSKVLLWPSPSHTKPRRISSSIRAMGSSASSQSHHADSIESEAGTDTIDYKSLSDEEWKKRLTNEQFYITRQKGTERAFSGEYWNTKTPGNYHCICCDTPLFESSTKFNSGTGWPSYYQPLGNNVKSKMDLSIIFMPRQEVLCAACDAHLGHVFEDGPPPTGKRYCINSASLKLKPRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANV3</accession>
    <name>V7ANV3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G121600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANV3"/>
    <dbReference type="Gramene" id="ESW07342">
        <property type="protein sequence ID" value="ESW07342"/>
        <property type="gene ID" value="PHAVU_010G121600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4650">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WRKGGYQ"/>
    <dbReference type="OrthoDB" id="201504at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010721">
        <property type="entry name" value="UstE-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32251">
        <property type="entry name" value="3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32251:SF23">
        <property type="entry name" value="3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE (DUF1295)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06966">
        <property type="entry name" value="DUF1295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50244">
        <property type="entry name" value="S5A_REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="251"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="38550" checksum="0566607E0685D864" modified="2014-02-19" version="1">MGSCRNLKNAVIAFLVPLPSIFFYLSFLNQYDSPNSSSLWSTLWSWCYHHPLLLANTLFFLNVNVLFWVIGLIQSSHWMIDPYWTVIPVMLVHYYATHPLAHYDLWRSRIVVLLTWVWSVRLTHNYFRREGWQWGAREDWRFTEMNEQYGKQWWWISFFAVYVSQQMFLIALSLPLYAVHTVNQPLSMWDLAATVVCLFGIVIAYFSDTQLYEFMNRNNKLKGLGKPVAPVLDSGLWYYCRHPNYFGEQLWWWGLAVFAWNLGLGWTFIGALVNTMCLAYVTKLVEDRMLKKESRAEAFRLYQKTTSVWIPWFKSSSSEVKNKKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANW8</accession>
    <name>V7ANW8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G115100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANW8"/>
    <dbReference type="SMR" id="V7ANW8"/>
    <dbReference type="STRING" id="3885.V7ANW8"/>
    <dbReference type="Gramene" id="ESW07264">
        <property type="protein sequence ID" value="ESW07264"/>
        <property type="gene ID" value="PHAVU_010G115100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1840">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIPGQYR"/>
    <dbReference type="OrthoDB" id="5986190at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46284:SF9">
        <property type="entry name" value="OS02G0109800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46284">
        <property type="entry name" value="PROTEIN KINESIN LIGHT CHAIN-RELATED 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13374">
        <property type="entry name" value="TPR_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13424">
        <property type="entry name" value="TPR_12"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="134"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="258"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="343"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="468"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="62293" checksum="3D0ABC96D9F1C635" modified="2014-02-19" version="1">MPPQMQPFADFLRNAPQADGSERRTPPLNRTVKKTLVVEDSSLDNPDLGPFLLKMARETIASGESPVKALDFAIRASRSFERCAGPGLELATCLHVVAAIYSSLGRLDEAVEALERSILLLEGENGSGHVMAQFSGYMQLGDTYSMIGQLDRAISCYESGLKIQMDVLGESDPRIAETCRYLAEAHVQAMQFEQAENFCKKTLEIHREHCSPASLTEATDRRLMALICEAKGDYEPALEHLVLASMSMIANAQDNEVAAIDVSIGDIYMSLCRFDEAVFAYQKALTVFKSTKGESHSSVALVFIRLADLYYRTGKLRESKSYCENALRIYSKPVVGTTAGEIASGLTEISAIYEALNEPEEALKLLQKAVKLLQDIPGQYRTVAGIEAQMGVMFYVVGRYMEAWKSFENAITKLRASGEKKSTFFGVVLNQMGLACVQLYKIGDAAKHFEEAKVILERECGTYHSDTLGVYSNLAATYDAMGRVEDAIEILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRNRKGKKSLENLIDSSSLKMKKEGKKRWSAFGLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP23</accession>
    <name>V7AP23_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA-directed RNA polymerase III subunit RPC6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G127200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP23"/>
    <dbReference type="SMR" id="V7AP23"/>
    <dbReference type="STRING" id="3885.V7AP23"/>
    <dbReference type="Gramene" id="ESW07407">
        <property type="protein sequence ID" value="ESW07407"/>
        <property type="gene ID" value="PHAVU_010G127200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3233">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACSRINQ"/>
    <dbReference type="OrthoDB" id="613763at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005654">
        <property type="term" value="C:nucleoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005666">
        <property type="term" value="C:RNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006383">
        <property type="term" value="P:transcription by RNA polymerase III"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000116">
        <property type="entry name" value="DNA-directed RNA polymerase III subunit RPC6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007832">
        <property type="entry name" value="RNA_pol_Rpc34"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016049">
        <property type="entry name" value="RNA_pol_Rpc34-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12780">
        <property type="entry name" value="RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05158">
        <property type="entry name" value="RNA_pol_Rpc34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="236" mass="26245" checksum="B169336CA90F4060" modified="2014-02-19" version="1">MSILQAKRKRQDLASTLSASMTNEERAVYNIIRGKKEMGIWQGDIKRETNIPDSMLKKSVKLLISKTLIKEVVNIQNKSKKVLMAMEFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISRKKVATRDAILEWTRTLGSEVFPGGVSSGQVEQILKVLVMENKVQEVNSTGFGEFSTVPAGEVCFRLAKKVGTNVKAGAMASIPCGVCPRIKFCTPNGVISPTTCQYYQKWLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQL5</accession>
    <name>V7AQL5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G053800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQL5"/>
    <dbReference type="SMR" id="V7AQL5"/>
    <dbReference type="STRING" id="3885.V7AQL5"/>
    <dbReference type="Gramene" id="ESW06506">
        <property type="protein sequence ID" value="ESW06506"/>
        <property type="gene ID" value="PHAVU_010G053800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0712">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTRYYVI"/>
    <dbReference type="OrthoDB" id="1933851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030544">
        <property type="term" value="F:Hsp70 protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044713">
        <property type="entry name" value="DNJA1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43888">
        <property type="entry name" value="DNAJ-LIKE-2, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="14"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="71" mass="8051" checksum="3C510663C052A6FF" modified="2014-02-19" version="1">MFGRGGPRKSDNSKYYDILGVSKNATEDEIKKCYRKFKELGQAYEVLGDPEKKEMYDQYGEDTLKEGMGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR32</accession>
    <name>V7AR32_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G0994000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR32"/>
    <dbReference type="Gramene" id="ESW07078">
        <property type="protein sequence ID" value="ESW07078"/>
        <property type="gene ID" value="PHAVU_010G0994000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07079">
        <property type="protein sequence ID" value="ESW07079"/>
        <property type="gene ID" value="PHAVU_010G0994000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ1P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENDELAC"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16655">
        <property type="entry name" value="RING-Ubox_WDSUB1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051348">
        <property type="entry name" value="U-box_ubiquitin_ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647">
        <property type="entry name" value="OS02G0152300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647:SF72">
        <property type="entry name" value="U-BOX KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="7">
        <location>
            <begin position="102"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="173" mass="19848" checksum="B270042DE814F535" modified="2014-02-19" version="1" fragment="single">SDVYSFGIILLRLITGKPALGIAKEVQYALDSRKLKSILDPLAGDWPFMLAEELVRLALRCCEMNRRNRPYFYPDVWRILEPMRASCGGSNTFQLGSHGKCQPPPYFICPISLEVMQDPHVAADGFTYEAEVIREWLKNGRHVSPRTNSKFAHHHLIPNHSLRHAIQDWLQTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARC9</accession>
    <name>V7ARC9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ER lumen protein retaining receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G000500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ERD2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARC9"/>
    <dbReference type="SMR" id="V7ARC9"/>
    <dbReference type="STRING" id="3885.V7ARC9"/>
    <dbReference type="Gramene" id="ESW07880">
        <property type="protein sequence ID" value="ESW07880"/>
        <property type="gene ID" value="PHAVU_009G000500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3106">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAIITWM"/>
    <dbReference type="OrthoDB" id="7694678at2759"/>
    <dbReference type="PhylomeDB" id="V7ARC9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046923">
        <property type="term" value="F:ER retention sequence binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006621">
        <property type="term" value="P:protein retention in ER lumen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000133">
        <property type="entry name" value="ER_ret_rcpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10585">
        <property type="entry name" value="ER LUMEN PROTEIN RETAINING RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00810">
        <property type="entry name" value="ER_lumen_recept"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00660">
        <property type="entry name" value="ERLUMENR"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="164"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="193"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="272" mass="30778" checksum="C0045C034D093ABD" modified="2014-02-19" version="1">MRGGKKSIHAIITWMRRQPPKAKAFIAVVSSMAALVLLRIIVHDHDNLFVAAEAVHSIGISVLIYKLIKEKTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDLATFATTLWVIYMIRFKLRSSYMQEKDNFAIYYVAVPCAVLALFIHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVQSVFGGQLVLRLPSGVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARQ0</accession>
    <name>V7ARQ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G030600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARQ0"/>
    <dbReference type="SMR" id="V7ARQ0"/>
    <dbReference type="STRING" id="3885.V7ARQ0"/>
    <dbReference type="Gramene" id="ESW08239">
        <property type="protein sequence ID" value="ESW08239"/>
        <property type="gene ID" value="PHAVU_009G030600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYWLCYG"/>
    <dbReference type="OrthoDB" id="5296287at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015145">
        <property type="term" value="F:monosaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17361">
        <property type="entry name" value="MFS_STP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000002">
        <property type="entry name" value="Sugar transport protein 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044778">
        <property type="entry name" value="MFS_STP/MST-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF498">
        <property type="entry name" value="MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="19"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="135"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="196"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="283"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="318"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="348"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="385"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="425"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="451"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="26"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW08239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="507" mass="55147" checksum="ABE413C41B3107CB" modified="2014-02-19" version="1">MAGGGFAVDTPNNGFAGKITLSVIISCIVAASSGLLFGYDIGISGGVTTMVPFLKKFFPEILRKAASSEVNMYCVYDSQVLTLFTSSLYLAGLITSLAASRVTMTLGRRNIILIGGTIFFVGGALNGGAENIPMLILGRILLGFGVGFTNQATPLYLSEIAPAKWRGAFNAGFQFFISVGVVAAGCINFGTAKHTWGWRVSLGLAVVPAAVMTMGALLITDTPSSLVERGKIDQARRALHKARGSSIDVEPELEELIRWSKIAKSVKQEPFKTMFERKYRPHLVMAFAIPFFQQMTGINIVAFYSPNLFQSVGLGHDAALLSAVILGAVNLASLLVSTGIVDRFGRRFLFITGGICMFLCQVAVSVLLAVATGVDGTKEISKSNAVLVLVLLCFYTAGFGWSWGPLSWLIPSEIFPLKIRSTGQSIAIAVQFIVVFILSQTFLSMLCHFKFGAFLFYGGWIVVMTIFVIFFLPETKGIPLESMYTIWGKHWFWRRFVEEEADQENLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASN8</accession>
    <name>V7ASN8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Gamma carbonic anhydrase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G0592000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASN8"/>
    <dbReference type="STRING" id="3885.V7ASN8"/>
    <dbReference type="Gramene" id="ESW08604">
        <property type="protein sequence ID" value="ESW08604"/>
        <property type="gene ID" value="PHAVU_009G0592000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08605">
        <property type="protein sequence ID" value="ESW08605"/>
        <property type="gene ID" value="PHAVU_009G0592000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTES">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="25818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050484">
        <property type="entry name" value="Transf_Hexapept/Carb_Anhydrase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13061">
        <property type="entry name" value="DYNACTIN SUBUNIT P25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13061:SF54">
        <property type="entry name" value="GAMMA CARBONIC ANHYDRASE 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="94" mass="10768" checksum="CC695E92E77659AC" modified="2014-02-19" version="1" fragment="single">VWAGNPAKFLRKLSNEEISFISQSATNYTNLAQVHASENSKSYDEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASU8</accession>
    <name>V7ASU8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G069200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic RPB8 RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASU8"/>
    <dbReference type="SMR" id="V7ASU8"/>
    <dbReference type="STRING" id="3885.V7ASU8"/>
    <dbReference type="Gramene" id="ESW08721">
        <property type="protein sequence ID" value="ESW08721"/>
        <property type="gene ID" value="PHAVU_009G069200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08722">
        <property type="protein sequence ID" value="ESW08722"/>
        <property type="gene ID" value="PHAVU_009G069200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3400">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YRMVIST"/>
    <dbReference type="OrthoDB" id="20018at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005736">
        <property type="term" value="C:RNA polymerase I complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005665">
        <property type="term" value="C:RNA polymerase II, core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005666">
        <property type="term" value="C:RNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000704">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005570">
        <property type="entry name" value="RPABC3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10917:SF1">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE I, II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10917">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03870">
        <property type="entry name" value="RNA_pol_Rpb8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000779">
        <property type="entry name" value="RNA_pol_Rpb8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00658">
        <property type="entry name" value="RPOL8c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR000779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="138" mass="16037" checksum="B86B608167A81CF4" modified="2014-02-19" version="1">MGELLFDDIFMIENLDPDGKKYDKVSRIVARSEKSDMYMLLDVNTEIYPIKEKERFLMALSPSLVLNTKDGSVSIQDKFEYIMHGRLYNIEECSKPQFEVEVYASFGGLQLMLRGHPSHCVKFAVDQKLFLLMRKIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASV2</accession>
    <name>V7ASV2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G118000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASV2"/>
    <dbReference type="SMR" id="V7ASV2"/>
    <dbReference type="STRING" id="3885.V7ASV2"/>
    <dbReference type="Gramene" id="ESW07296">
        <property type="protein sequence ID" value="ESW07296"/>
        <property type="gene ID" value="PHAVU_010G118000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QVDGQHW"/>
    <dbReference type="OrthoDB" id="186626at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37909">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37909:SF1">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13578">
        <property type="entry name" value="Methyltransf_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="35528" checksum="7BEE073137D4468F" modified="2014-02-19" version="1">MKTENHHASRRLSPSLQPKMLKTAKPAAYFILLLLTYFLGYFSYHPSSSSVPLSPSSPPPPQLPEPVTGFPINTTELNPFRITTRCADPILPETIRRTLVDRLFNGTSPFENFPPPHAAEKLRRTKRVKGWGSTGAVFENLIRRVRPRTVVEVGTFLGASAIHMAELTRQLGLQTQIFCVDDFRGWAGFKERFTNIPMENGDVWLFYQFLQNVVTFNQTGSVLPVPFSSGSTLMLFCEWGVYADLVEIDAGHDFLSAWADINRGFRILRPGGVIFGHDYFTAADNRGVRRAVDLFAKVQNLKVYVDGQHWVIYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATJ9</accession>
    <name>V7ATJ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">cysteine--tRNA ligase</fullName>
            <ecNumber evidence="5">6.1.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="17">Cysteinyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_009G091200g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.16" evidence="5"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATJ9"/>
    <dbReference type="SMR" id="V7ATJ9"/>
    <dbReference type="STRING" id="3885.V7ATJ9"/>
    <dbReference type="Gramene" id="ESW08987">
        <property type="protein sequence ID" value="ESW08987"/>
        <property type="gene ID" value="PHAVU_009G091200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2007">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMRWPSP"/>
    <dbReference type="OrthoDB" id="438179at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004817">
        <property type="term" value="F:cysteine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006423">
        <property type="term" value="P:cysteinyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00672">
        <property type="entry name" value="CysRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000009">
        <property type="entry name" value="Cysteine--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1910:FF:000003">
        <property type="entry name" value="Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1910">
        <property type="entry name" value="Cysteine-tRNA ligase, C-terminal anti-codon recognition domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00041">
        <property type="entry name" value="Cys_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015803">
        <property type="entry name" value="Cys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00435">
        <property type="entry name" value="cysS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890:SF25">
        <property type="entry name" value="CYSTEINE--TRNA LIGASE, CHLOROPLASTIC_MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="CYSTEINYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00983">
        <property type="entry name" value="TRNASYNTHCYS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="13" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA synthetases class I catalytic" evidence="18">
        <location>
            <begin position="83"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00031499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF01406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW08987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="564" mass="64024" checksum="3008E8B3B7F0085A" modified="2014-02-19" version="1">MGTVSLLKCYRPFFSTLFPRSAPSTPHAAIFRTKNPQSFCTGSSPPLTAVKECGESDAEGLTLKKSAPEVWLHNTMSKTKQLFKPKVESKVGMYVCGVTAYDLSHIGHARVYINFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARAKELEEDPISLSRRYCEEFCRDMITLNCLPPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFHVEKFPEYGKLSSRDLEDNRAGERVAVDTRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSAVYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSDISIWMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPVNYSNIQLESASDRIFYIYETLYECESFLNQHDQTIRKDSTPPDTLNIIDKFHDVFLTSMSDDLHTPVVLAGMSDPLKSINDLLHTRKGKKQKFRIESLAALEKSIGDVLTVLGLMPASYSEVLQQLKEKALKRANLTEEKVLQKIEERAAARIEKEYAKSDAIRKDLAILGITLMDSPNGTTWRPTIPLPLQELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATK5</accession>
    <name>V7ATK5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LOB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G138500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOB domain-containing protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATK5"/>
    <dbReference type="SMR" id="V7ATK5"/>
    <dbReference type="STRING" id="3885.V7ATK5"/>
    <dbReference type="Gramene" id="ESW07541">
        <property type="protein sequence ID" value="ESW07541"/>
        <property type="gene ID" value="PHAVU_010G138500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY2U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTWAVQN"/>
    <dbReference type="OrthoDB" id="1893065at2759"/>
    <dbReference type="PhylomeDB" id="V7ATK5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004883">
        <property type="entry name" value="LOB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301:SF67">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03195">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50891">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LOB" evidence="3">
        <location>
            <begin position="49"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="16"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW07541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="36749" checksum="4F86D868400DAEB5" modified="2014-02-19" version="1">MQPKSRFFVPPQKAVNNNNNSNTTTTTPTSSTTTNNRISTTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVVSPHDKDQAVRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCRAELELVLQQLAMFRAQAQNQHQYQQQHGMYAPNNVNVAVNGDGEVLNADPMGLYSQQQYQCLQPHQQEQYVMMHENGSQNCNGATPLQEQINTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKPVIDIDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEGECMQQAQDHDLKGAATSFSLTNCTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUW5</accession>
    <name>V7AUW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G011500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUW5"/>
    <dbReference type="SMR" id="V7AUW5"/>
    <dbReference type="STRING" id="3885.V7AUW5"/>
    <dbReference type="Gramene" id="ESW08016">
        <property type="protein sequence ID" value="ESW08016"/>
        <property type="gene ID" value="PHAVU_009G011500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SFSV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1750209at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427:SF5">
        <property type="entry name" value="DUF4283 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="6"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="469"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="90"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="469"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW08016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="671" mass="76918" checksum="7E73AFCE23D2641A" modified="2014-02-19" version="1">MASYPISFFFSHFPTNFGEYEMWKNFRRWGKVQEVFIPRRTNKYGHRFGFVRFIGISDSDKLEYQLDNIWIGNMKLHVSKPKYRRSYKGGRVEIDRGQQKRRDENGSKKVEPRVRKVWRRKGEISYAQAVKNGIHTRISSEKWMGQIMQVKVEDKEWMKRSCVGYLNETADIEDIKNSFFMNGANFIRLRYLGDNAMLLTPEGDTSVEDLIKENKEWLEEIFDEITPWDNSVRVAQRRVWVRVWGLPFHLWEWSVFVNVVINIGNLLAVDKTTENFDELQYARVLVSIPFVAEARTSKRMMINETIYQIHIEEDLTCCDKSNERKENEVSWSESFVGDEECESNYDNASESEKLMPTNQNMKSEFNHIGISSEIMSEDRYDSPVLRDVLKSCFSDTVVPDSLSHGNGYIRRSQSNMLQVSPSAAQECGLSESRAQFGEQVDGKNLQNGLDAWPRCTLQNDALHVIPNVHGSSTTQGDSRQMRNGPQGANSVQMLEEGGEGDNPLPLYETINPSGGRHEREDEALMIGGAATRTQTGEAKEDNVLKGKDAKEFQGSMDVISTPNSGFMRNHMSLIKQTNINPNSMLQRSNILIGESSKIQKQSSQASRIGVRRKSKRLVNKHASNRISDSGIRNCNRMFWLKNSPMDAVNLWDLAKKMGFSYSGDEEDVINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW08</accession>
    <name>V7AW08_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G153600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex. May be involved in lateral roots and nodules formation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW08"/>
    <dbReference type="STRING" id="3885.V7AW08"/>
    <dbReference type="Gramene" id="ESW09754">
        <property type="protein sequence ID" value="ESW09754"/>
        <property type="gene ID" value="PHAVU_009G153600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PVNGNAY"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="PhylomeDB" id="V7AW08"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48017">
        <property type="entry name" value="OS05G0424000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="11" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="291"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="330"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="390"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="413"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="452"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="14">
        <location>
            <begin position="44"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00045588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW09754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="486" mass="53510" checksum="10208666D6A82F56" modified="2014-02-19" version="1">MVQNVSTTNVSFRRGYDIEEDSIDGAPLKSDPEYYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPSVMILFSIVTLYTSSFLADCYRSGDPMFGKRNYTFMDAVSTILGGHSVTFCGIVQYLNLFGSAVGYTIAASLSMMALKRSHCIHSSDGENPCHISSSPYMIGFGAMQIFFSQIPDFHNMWWLSIVAAVMSFTYSIIGLVLGIVKITETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSLPSEVKTMKKAAKLSIAVTTTFYMLCGCIGYAAFGDLAPGNLLAGFGFHKLFWLVDMANAAIVIHLVGAYQVYAQPLFAFVEKETAKRWPKTNKEFKISVPGLPPYNQNIFSLVWRTVFVIITTVISMMLPFFNDVLGVIGALGFWPLTVYFPVEMYILQKRIPKWSMRWISLKLMSAVCLIVSIVAGLGSVVGVLLDLKKYKPFSSDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWD6</accession>
    <name>V7AWD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="22">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_009G140500g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Secreted</location>
            <location evidence="3">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the polygalacturonase-inhibiting protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWD6"/>
    <dbReference type="SMR" id="V7AWD6"/>
    <dbReference type="Gramene" id="ESW09600">
        <property type="protein sequence ID" value="ESW09600"/>
        <property type="gene ID" value="PHAVU_009G140500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWF1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMDCIDR"/>
    <dbReference type="OrthoDB" id="5789657at2759"/>
    <dbReference type="PhylomeDB" id="V7AWD6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009653">
        <property type="term" value="P:anatomical structure morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000383">
        <property type="entry name" value="Leucine-rich repeat receptor protein kinase EMS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000486">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000400">
        <property type="entry name" value="Nuclear pore complex protein NUP107"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000480">
        <property type="entry name" value="Pollen receptor-like kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053059">
        <property type="entry name" value="Inactive_SerThr-Kinase_ABA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48003">
        <property type="entry name" value="OS07G0626500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48003:SF5">
        <property type="entry name" value="OS07G0626500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0134">Cell wall</keyword>
    <keyword evidence="16" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="15 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-0611">Plant defense</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 21" id="KW-0732">Signal</keyword>
    <keyword evidence="8 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753675" description="Protein kinase domain-containing protein" evidence="21">
        <location>
            <begin position="28"/>
            <end position="1043"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="585"/>
            <end position="607"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="763"/>
            <end position="1043"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="537"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="699"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="19">
        <location>
            <begin position="705"/>
            <end position="723"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00038043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW09600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1043" mass="114129" checksum="CE4535E0F3BD2DF1" modified="2014-02-19" version="1">MTSPPNLFISLLLLLLLFFTIFSASSSASLPELRSLMEFKKGITQDPHNLLDSWSPAAVAEAAAACPTTWQGVVCDEESGNVTGIVLDRLRLGGELKFHTLLDLRMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNYLNLSNNQFKGGFPSGLSNLQQLRVLDLHANALWAEIGDVLSTLRNVERVDLSLNQFFGGLSLTVENVSGLANTVHFLNLSHNNLNGHFFMNSTIGLFRNLQVLDLSNNSITGELPSFGSLPTLRVLRLPRNQLFGSVPEELLQTSVPLEELDLSVNGFTGSIAVINSTSLNILNLSSNSLSGSLPTSLRRCTVIDISRNMLSGDISVIQNWEAPLEVINLSSNKLSGSLPPTLGTYSKLFTVDLSLNELNGSIPRGLVTSSSVTRLNLSGNQLTGQLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGALPSEIDRMSVLKLLNVARNEFSGPLPNELNKLLYLEYLDLSNNKFSGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFSPSSFRPGNGKLMLPNDSPETSSVPDNIPDNRRHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTTSLSFSNDHLLTSNSRSLSGGQSEFVTEISEHGLPQGMVATSSASVNLNLMDNPPTSSGRKSSPGSPLSSSPRFIETCEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFTQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELVTASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWK8</accession>
    <name>V7AWK8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G176400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWK8"/>
    <dbReference type="SMR" id="V7AWK8"/>
    <dbReference type="STRING" id="3885.V7AWK8"/>
    <dbReference type="Gramene" id="ESW10037">
        <property type="protein sequence ID" value="ESW10037"/>
        <property type="gene ID" value="PHAVU_009G176400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV35">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEYQMFT"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000683">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000725">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000771">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000721">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46662">
        <property type="entry name" value="DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46662:SF105">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="13"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753831" evidence="9">
        <location>
            <begin position="23"/>
            <end position="955"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="866"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="10">
        <location>
            <begin position="30"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="11">
        <location>
            <begin position="86"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="11">
        <location>
            <begin position="692"/>
            <end position="821"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW10037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="955" mass="103932" checksum="3530D05D5FE2FE9A" modified="2014-02-19" version="1">MGSICMCHFILPLTIVVVATLGDSTTESYWLLKIKSELVDPLGALRNWSPTTHICSWNGLTCEVDQTHVVGLNLSGSGISGSISGELSHLISLQALDLSSNNLTGSIPSELGQLQNLRILLLYSNYLSHNIPEEIGNLSKLQVLRLGNNMLAGEIPPSIGNLSELAVLGVANCNLNGSIPIEVGNLKHLVSLDLQVNSLSGLIPEEIQGCKELQNFAASNNMLEGEIPSSMGSLKSLRILNLANNTLSGSIPTSLSLLSNLTYLNLLGNKLNGEIPPELNSLSQLQKLDLSRNNLSGSLTLLNVKLQNLETMVLSDNALTGIPYNFCLRGSKLQQLFLARNKLYGRFPLGLLNCSSIQQVDLSDNSFEGELPSSLDKLQNLTDLMLNNNSFIGSLPPEIGNISSLRSLFLFGNSFTGKIPAEIGRLKRLNTIYLYDNQMSGPIPRELTNCTSLTGIDFFGNHFYGSIPETIGKLKGLTVLHLRQNDLSGPIPPSMGYCKRLQLLALADNKLSGSIPPTFSYLSQLRTITLYNNSFEGPLPHSLSLLRNLKIINFSNNKFSGSIVPLTGSNSLTVLDLTNNSFSGSIPSILANSGDLTRLRLANNYLTGTIPSELGHLTELNFLDLSFNNLTGHVPPQLSNCKKIEHLLLNNNRLGGEMLPWLGSLQELGELDLSFNNFHGRVPAELGGCSKLLKLSLHHNNLSGEIPLEIGNLTLLNVFNLQRNSLSGHIPSTIQQCSKLYELRLSENFLSGIIPVGLGAVTELQVILDLSRNLFSGEIPSSLGNLMKLERLDLSFNHLQGQLPPSLGQLTSLHVLNLSNNHLHGLIPSTFSGFPLSSFLNNDHLCGPPLALCSETSRMKLSNSQVAAIIVAIVLTSTLICLVLLYIMLRIWCNWIKVAVSSEEGGMVEQKTRNGEYWNMNSPELFPSPEKQISATTCICNLKIHAAARENTLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX77</accession>
    <name>V7AX77_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G1091000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX77"/>
    <dbReference type="STRING" id="3885.V7AX77"/>
    <dbReference type="Gramene" id="ESW09208">
        <property type="protein sequence ID" value="ESW09208"/>
        <property type="gene ID" value="PHAVU_009G1091000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8DS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1426501at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="134" mass="14795" checksum="F3D85AB3B0899BCB" modified="2014-02-19" version="1" fragment="single">METHMSASFTTLSPNRSIQSITLGLSSNSINSASSFLKPKSLPYIKHSCSLHVQQILRAIPQIPLQIHVSKAITDIKTNFLNAIVDSAFEFVDQLVLPSQANFAPVEELGEAMDITDIEGHIPHHFPEGVYIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYW9</accession>
    <name>V7AYW9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">SWI/SNF complex subunit SWI3C</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G127700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7AYW9"/>
    <dbReference type="Gramene" id="ESW09441">
        <property type="protein sequence ID" value="ESW09441"/>
        <property type="gene ID" value="PHAVU_009G127700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1279">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 9"/>
    </dbReference>
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        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SWI/SNF complex subunit SMARCC2 isoform c"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
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    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Homeodomain-like_sf"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
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        <property type="entry name" value="Znf_ZZ"/>
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        <property type="entry name" value="SWI/SNF COMPLEX-RELATED"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="MYB_LIKE"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ZF_ZZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIRM" evidence="13">
        <location>
            <begin position="174"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="ZZ-type" evidence="12">
        <location>
            <begin position="337"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="11">
        <location>
            <begin position="392"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="14">
        <location>
            <begin position="395"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="534"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="750"/>
            <end position="787"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="11"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="30"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="42"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="543"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="750"/>
            <end position="773"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50135"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
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            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW09441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="787" mass="86749" checksum="2A377AC3A1ED96EA" modified="2014-02-19" version="1">MPASPSENRTRWRKRKRDSQIARRHPKHEEDEEEDEENPNAEDDHAEREYDSEEQTHHHQNHPNSQPHVETEVLSDHGVLISQFPAVVKRSVNRPHSSVTAIVALERALESGDNKAQSALTPPVLENVSYGQLQALSSVPSDNFAFDGDSSFVITPPAILEGRGVVKRFGAKVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPDHTPEKYMECRNCIVALHLEEPGKRITVSDCQGLLTGVDVEDLTRIVRFLDHWGIINYCVQMPSLESPNVMSCLREEPSGEVRVPAEALKSIDSLIKFDNPICKLKADEIYSSLTAHNADFFDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFLRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSTSVSSNAMDRDGSGRLHCYSNGDTAGPVHQIRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSMDNSGNSSQVEAPGHDNRTNSENIRCRDGGSHGETAVSNNSNEDKAKVHGSWSLNDGRTTPLSVEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRFAAERSRVISARLGAAGAAPTMTTSGVGPSMASNGNNRQQMISVSPSQPSISGYGGNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSASSTAMFNAPGNVQPTTNHPLLRPVSGTNSGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1W7</accession>
    <name>V7B1W7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Isoflavone 2'-hydroxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G244000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7B1W7"/>
    <dbReference type="STRING" id="3885.V7B1W7"/>
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        <property type="protein sequence ID" value="ESW10858"/>
        <property type="gene ID" value="PHAVU_009G244000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="2789670at2759"/>
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        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd20653">
        <property type="entry name" value="CYP81"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000023">
        <property type="entry name" value="Cytochrome P450 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
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    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050651">
        <property type="entry name" value="Plant_Cytochrome_P450_Monoox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947">
        <property type="entry name" value="CYTOCHROME P450 82C3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947:SF24">
        <property type="entry name" value="ISOFLAVONE 2'-HYDROXYLASE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9 10" id="KW-0349">Heme</keyword>
    <keyword evidence="6 9 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="9">
        <location>
            <position position="440"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW10858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="503" mass="57825" checksum="A630784C4D912C21" modified="2014-02-19" version="1">MEVCALVLLGCYFLVSLVFIGFSLKLLLGSRRVRNLPPGPTPLPIIGNLNLLEQPIHRFFQRTSKQYGKIISLWFGSRLVVVVSSPSAYQECFTKNDVALANRPRNLSGKYIFYDNTTVGSCSHGEHWRNLRRITSLDVLSTQRVHSFSGIRSDETKRLVHRMARNARTDYAHVEITSLFSDLTYNNIMRMISGKRFYGEETDMKNVEEAREFRDTVSEMLKLMGLSNKGDYLPFLRWFDFQNVEKRLKNISNRYDNILNKILEENRSSKDRENSMIDHLLKLQETQPEYYTDQIIKGLALAMLFGGTDSSTGSLEWALSNLLNNPEVLKKAREEMDAQVGQERLLSESDLPKLPYLRKIILETLRLYPPAPILIPHVSSEDITIGGYNVPKDSIVIINGWAMQRDPEHWKDATSFRPERFDEEGEEKKLVAFGMGRRACPGEPMAMQSVSYTVGLMIQCFDWKRVNEEKLDMTENNWITLSRLIPLEAMCKARPVTQQIGTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B257</accession>
    <name>V7B257_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G068900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B257"/>
    <dbReference type="STRING" id="3885.V7B257"/>
    <dbReference type="Gramene" id="ESW11903">
        <property type="protein sequence ID" value="ESW11903"/>
        <property type="gene ID" value="PHAVU_008G068900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11904">
        <property type="protein sequence ID" value="ESW11904"/>
        <property type="gene ID" value="PHAVU_008G068900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXJM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEMMGGR"/>
    <dbReference type="OrthoDB" id="2015351at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009767">
        <property type="term" value="P:photosynthetic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021659">
        <property type="entry name" value="NdhS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35494">
        <property type="entry name" value="NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35494:SF5">
        <property type="entry name" value="NADH DEHYDROGENASE-LIKE COMPLEX, SUBUNIT S-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="16682" checksum="B0AD24247E7220C2" modified="2014-02-19" version="1">MATFPTLHGLHNPFPRSQFLGQEHPPTHHFFLRQPPSTVHPKAPPTHEVLKPQAKFNILEMMGGRGLCNGEKGIQQELKKPLIVVDQPPPSASSGKEQEDESGGDEGSGEVPVDGFDKEMMGLTGGFPGGEKGLKKFIEKNPPPKSDNVLAMSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B529</accession>
    <name>V7B529_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G130700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDC45 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B529"/>
    <dbReference type="SMR" id="V7B529"/>
    <dbReference type="STRING" id="3885.V7B529"/>
    <dbReference type="Gramene" id="ESW12650">
        <property type="protein sequence ID" value="ESW12650"/>
        <property type="gene ID" value="PHAVU_008G130700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2475">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EDCFMEA"/>
    <dbReference type="OrthoDB" id="10258882at2759"/>
    <dbReference type="PhylomeDB" id="V7B529"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031261">
        <property type="term" value="C:DNA replication preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000727">
        <property type="term" value="P:double-strand break repair via break-induced replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048229">
        <property type="term" value="P:gametophyte development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902977">
        <property type="term" value="P:mitotic DNA replication preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006279">
        <property type="term" value="P:premeiotic DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003874">
        <property type="entry name" value="CDC45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507">
        <property type="entry name" value="CDC45-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10507:SF0">
        <property type="entry name" value="CELL DIVISION CONTROL PROTEIN 45 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02724">
        <property type="entry name" value="CDC45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="151"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="154"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="583" mass="65775" checksum="8CB720C51302F4B8" modified="2014-02-19" version="1">MRETRVDSFYTKLRQSALSSSSSPVLIFPSTSDVDSLCALKIIFHILESDSIQYACYPVSSFHEIHKYTSSASNHHPLSVVLVNWGNHRDLRKALNLGPNARVFVVDSHRPIHLRNLSDQNDAVVVLFTKYDEQQSDLAYDFDLTTLANAAAADGDESEPESESDSESDDDGNGSRKRRKKNDDGEEDPIKLYRKLKKDYYRLGTFHGKPSGCLMYELADSLRKNTNELLWLACVSLTDQFVHERLSDERYLDGVMELEQHINSSGNLDVVTSVTLKDGTKIRAPNSSRITYEEQPRLMLLQEWSLFDSMMCSSYIATKLKTWSENGVKKLNLLFGRMGFALTDCHQKFQHMNVEVKRKMKEEFERFLPEYGLTDFYYRSFQRTLKYSSKVSAADVVYGVTALLESFVKSDGSSASKQFGVAYDALSLNNIDNLRTGMQHAIKIQRAILRQGSAAITKNGCIRSGRSFRWLKLEDSSDAKLLGYPQALTKFCYFLMDALREKGATMKPLLCACVSQEPGKVLIVGVCGRPRLAGARGNAFGIAFRTAAEEIGSEFFHELFESSWIVLDASAVNSFMVRLIEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5F6</accession>
    <name>V7B5F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G164400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5F6"/>
    <dbReference type="Gramene" id="ESW13059">
        <property type="protein sequence ID" value="ESW13059"/>
        <property type="gene ID" value="PHAVU_008G164400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RRJS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSEAHIC"/>
    <dbReference type="OrthoDB" id="1418158at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427:SF5">
        <property type="entry name" value="DUF4283 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="7"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW13059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="329" mass="38682" checksum="DDB865FF454B6E2F" modified="2014-02-19" version="1">MDHGRGTSFFFSNFPPDFMEADMWKVFQRWGRVSDIFISRRLNIKRQRFRFVRFMGVQNVRELEKSLSSVWIETRKVIVNRPKYNKTVETSKEWNVKQKAKAKVEEKQTPKEWLKQCYIGRVSDLRKVGDLNESFILGGYNFIKIKYLDGFHVLLLGEYELKVKEVVEEKKEWFDDLFDTIVPWEDQFVVVDKLVWVRCRGLPLILWNVDCFGKNAALLGNLVEVDKATQELEELEYVRFMIRVHVGCEVKLSSYFKINRILYQVSLVEECTVSKHHLYQGHWDGKSVEQFSYIESQASFVSGECGIDDGEYVYSCGREELGVQIAKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5N5</accession>
    <name>V7B5N5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">1-aminocyclopropane-1-carboxylate synthase</fullName>
            <ecNumber evidence="8">4.4.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">S-adenosyl-L-methionine methylthioadenosine-lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G058400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21744"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:58360"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="4.4.1.14"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Alkene biosynthesis; ethylene biosynthesis via S-adenosyl-L-methionine; ethylene from S-adenosyl-L-methionine: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.14" evidence="8"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5N5"/>
    <dbReference type="SMR" id="V7B5N5"/>
    <dbReference type="STRING" id="3885.V7B5N5"/>
    <dbReference type="Gramene" id="ESW11776">
        <property type="protein sequence ID" value="ESW11776"/>
        <property type="gene ID" value="PHAVU_008G058400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0256">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPAFYRD"/>
    <dbReference type="OrthoDB" id="691673at2759"/>
    <dbReference type="PhylomeDB" id="V7B5N5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016847">
        <property type="term" value="F:1-aminocyclopropane-1-carboxylate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009693">
        <property type="term" value="P:ethylene biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009835">
        <property type="term" value="P:fruit ripening"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00609">
        <property type="entry name" value="AAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050478">
        <property type="entry name" value="Ethylene_sulfur-biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43795:SF74">
        <property type="entry name" value="1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43795">
        <property type="entry name" value="BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00753">
        <property type="entry name" value="ACCSYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0266">Ethylene biosynthesis</keyword>
    <keyword evidence="6" id="KW-0292">Fruit ripening</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="12">
        <location>
            <begin position="48"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="464"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00039053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00042673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW11776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="483" mass="54565" checksum="EA583356321A0E07" modified="2014-02-19" version="1">MALKNTSFQLLSEIATNGNHGENSSYFDGWKAYESDPYHPTENPQGVIQMGLAENPLSLDLIQEWILKNPKGSICTPEGVKWFKYIANFQDYHGLPEFRNGLANYMSKVRGGRVRFDPDRIVMGGGTTGANELIMFCLANGGDAFLVPSPYYPAFARDLCWRTKARLIPVECYSINNFMVTREALEEAYNKAIDANINVKGLIITNPSNPLGTTMDKETLKSIVGFINEKNIHLVCDEIYAGTVFRGPRFVSVSEVMQELEHCNKDLIHIVYSLSKDLGIPGLRVGIVYSYNDEVVNQGRKMSSFGLVSTQTQFFVAALLSDDEFVERFLAESARRLAARYNHFTKELEKVNITCLPSNAGLFFWMNLRGLLKEKTFEGEMMLWHVIINEVKLNVSPGSAFNCSEPGWYRVCFANMDDETVEVALKRIRAFVGKETGKPVELKRWKSNLRLSFSSRRFDENVMSPHMLSPHSPMPHSPLVRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BA71</accession>
    <name>V7BA71_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G009900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the archaeal Rpo6/eukaryotic RPB6 RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BA71"/>
    <dbReference type="SMR" id="V7BA71"/>
    <dbReference type="STRING" id="3885.V7BA71"/>
    <dbReference type="Gramene" id="ESW14698">
        <property type="protein sequence ID" value="ESW14698"/>
        <property type="gene ID" value="PHAVU_007G009900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW14699">
        <property type="protein sequence ID" value="ESW14699"/>
        <property type="gene ID" value="PHAVU_007G009900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3405">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEGFRHK"/>
    <dbReference type="OrthoDB" id="259769at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005736">
        <property type="term" value="C:RNA polymerase I complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005665">
        <property type="term" value="C:RNA polymerase II, core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005666">
        <property type="term" value="C:RNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000419">
        <property type="term" value="C:RNA polymerase V complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006360">
        <property type="term" value="P:transcription by RNA polymerase I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006366">
        <property type="term" value="P:transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042797">
        <property type="term" value="P:tRNA transcription by RNA polymerase III"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.940.10:FF:000003">
        <property type="entry name" value="DNA-directed RNA polymerases I, II, and III subunit RPABC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00192">
        <property type="entry name" value="RNApol_arch_Rpo6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020708">
        <property type="entry name" value="DNA-dir_RNA_polK_14-18kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006110">
        <property type="entry name" value="Pol_omega/Rpo6/RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028363">
        <property type="entry name" value="RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036161">
        <property type="entry name" value="RPB6/omega-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006111">
        <property type="entry name" value="Rpo6/Rpb6"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002208">
        <property type="entry name" value="PRK01099.1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47227">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE SUBUNIT K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47227:SF8">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASES II, IV AND V SUBUNIT 6A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01192">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500154">
        <property type="entry name" value="RPB6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000778">
        <property type="entry name" value="RpoK/RPB6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01409">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63562">
        <property type="entry name" value="RPB6/omega subunit-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01111">
        <property type="entry name" value="RNA_POL_K_14KD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW14699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="141" mass="16453" checksum="27C24147E2BD7904" modified="2014-02-19" version="1">MADEDYDDMDMGYEDEPIEPEIEEGAEEDVENKNDEMVGDAIDTEDKEEEQPVERPRKTSKYMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBA7</accession>
    <name>V7BBA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LOB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G222200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOB domain-containing protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBA7"/>
    <dbReference type="SMR" id="V7BBA7"/>
    <dbReference type="STRING" id="3885.V7BBA7"/>
    <dbReference type="Gramene" id="ESW13741">
        <property type="protein sequence ID" value="ESW13741"/>
        <property type="gene ID" value="PHAVU_008G222200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYX5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTFAMDQ"/>
    <dbReference type="OrthoDB" id="1925971at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004883">
        <property type="entry name" value="LOB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301:SF24">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31301">
        <property type="entry name" value="LOB DOMAIN-CONTAINING PROTEIN 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03195">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50891">
        <property type="entry name" value="LOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LOB" evidence="3">
        <location>
            <begin position="10"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="90"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="184" mass="20669" checksum="268942F5B62889CB" modified="2014-02-19" version="1">MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSTTTTTATTTTNTFNSHVSLPPFPEFFSCTDFNDNFFHNSSSQSPPLTRHEMVDDFIPIPYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC83</accession>
    <name>V7BC83_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Gnk2-homologous domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G0492000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC83"/>
    <dbReference type="STRING" id="3885.V7BC83"/>
    <dbReference type="Gramene" id="ESW15159">
        <property type="protein sequence ID" value="ESW15159"/>
        <property type="gene ID" value="PHAVU_007G0492000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW15160">
        <property type="protein sequence ID" value="ESW15160"/>
        <property type="gene ID" value="PHAVU_007G0492000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWDY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAENCTR"/>
    <dbReference type="OrthoDB" id="1909574at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000002">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000003">
        <property type="entry name" value="Cysteine-rich RLK (RECEPTOR-like protein kinase) 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32099">
        <property type="entry name" value="CYSTEINE-RICH REPEAT SECRETORY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32099:SF103">
        <property type="entry name" value="GNK2-HOMOLOGOUS DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
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        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732290" description="Gnk2-homologous domain-containing protein" evidence="4">
        <location>
            <begin position="24"/>
            <end position="269"/>
        </location>
    </feature>
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        <location>
            <begin position="22"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="5">
        <location>
            <begin position="131"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="241"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="257"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="29872" checksum="90D76D081AF303B9" modified="2014-02-19" version="1" fragment="single">MAALSFMLILFFSFPFLISLGSAQKYICDKGGNYTANSTYSTNLNTLLSTLSSNTQIEYGFYNFSYGQNTDTVYAIGLCRGDQQPGECRSCLNNSRVGIMQSCPNQKKAILWSDQCMLRYSYDTIFHKMETSPTYYWWNVGNVTEVDQFNEVLGNLMKSLRDIAASGDSRRKYATAENATGLNFQTIYGLVQCTPDLSQQECYHCLDGAISEIPNCCNGKIGGRVLKPSCNLRFESNNFYGNTTTLDPDPEAPPPSTNNTSSTNTTSSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
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        <name type="common">Kidney bean</name>
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            <taxon>eudicotyledons</taxon>
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        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="Gramene" id="ESW15665">
        <property type="protein sequence ID" value="ESW15665"/>
        <property type="gene ID" value="PHAVU_007G091700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1401861at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW15665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="95" mass="10772" checksum="A95618844B1397C9" modified="2014-02-19" version="1">MLACNTSTFRTNCPIFSNHIINIEKLDEYNYSTWASKIGLWLSGLGWATNPISIDAQICSVIKFNVHTSLKLIFCPHETVHQFGVRPVPFILNFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDR5</accession>
    <name>V7BDR5_PHAVU</name>
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            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
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    </gene>
    <organism evidence="2 3">
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        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>eudicotyledons</taxon>
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        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
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    </dbReference>
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        <property type="gene ID" value="PHAVU_007G094500g"/>
    </dbReference>
    <dbReference type="OMA" id="YSINHHE"/>
    <dbReference type="OrthoDB" id="1431662at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756608" evidence="1">
        <location>
            <begin position="21"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="55" mass="6325" checksum="3D6C33AF280CA8DB" modified="2014-02-19" version="1">MAPITTYFLMLISSVFYVFSDAHLALQEFTAQDHLAFPYSSLGYSINHHEYPILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
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            <fullName evidence="3">Reverse transcriptase zinc-binding domain-containing protein</fullName>
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            <taxon>eudicotyledons</taxon>
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            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE44"/>
    <dbReference type="Gramene" id="ESW16104">
        <property type="protein sequence ID" value="ESW16104"/>
        <property type="gene ID" value="PHAVU_007G129600g"/>
    </dbReference>
    <dbReference type="OMA" id="EEESCCH"/>
    <dbReference type="OrthoDB" id="1433444at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="131" mass="15277" checksum="AF030A0BB5D55E25" modified="2014-02-19" version="1">MCGLCGLEEESCCHLFFDYNFARRVWGLCHRWLGVLVMSQIEPKSNFDQFRMNRALETVNNVWNTIWVGVVSKIWSHMNNIIFKRGVGDAFGVFSLVQVKVWLWVSINCRSASFSFSDWCLEPLVCMRLIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEP8</accession>
    <name>V7BEP8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotransferase-like plant mobile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G124600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Viridiplantae</taxon>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEP8"/>
    <dbReference type="STRING" id="3885.V7BEP8"/>
    <dbReference type="Gramene" id="ESW16045">
        <property type="protein sequence ID" value="ESW16045"/>
        <property type="gene ID" value="PHAVU_007G124600g"/>
    </dbReference>
    <dbReference type="OMA" id="EMCNASK"/>
    <dbReference type="OrthoDB" id="1428937at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010073">
        <property type="term" value="P:meristem maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019557">
        <property type="entry name" value="AminoTfrase-like_pln_mobile"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044824">
        <property type="entry name" value="MAIN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033">
        <property type="entry name" value="PROTEIN MAIN-LIKE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033:SF8">
        <property type="entry name" value="PROTEIN MAINTENANCE OF MERISTEMS-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10536">
        <property type="entry name" value="PMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754236" description="Aminotransferase-like plant mobile domain-containing protein" evidence="2">
        <location>
            <begin position="26"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase-like plant mobile" evidence="3">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="91" mass="10214" checksum="052CC468D05AF03B" modified="2014-02-19" version="1" fragment="single">MPNTSAGRVHLMYMLLLADLTHVATYSWSSAVLACLYRALDHGIDYHQNNIGGCMLLLQCWAWEWIKTLSPIIEPLTPEDIATGHCFPLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFE8</accession>
    <name>V7BFE8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Classical arabinogalactan protein 26</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G166400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFE8"/>
    <dbReference type="Gramene" id="ESW16557">
        <property type="protein sequence ID" value="ESW16557"/>
        <property type="gene ID" value="PHAVU_007G166400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S95S">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LVICIMQ"/>
    <dbReference type="OrthoDB" id="1165939at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039346">
        <property type="entry name" value="AGP25/26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35725">
        <property type="entry name" value="CLASSICAL ARABINOGALACTAN PROTEIN 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35725:SF4">
        <property type="entry name" value="CLASSICAL ARABINOGALACTAN PROTEIN 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756660" description="Classical arabinogalactan protein 26" evidence="2">
        <location>
            <begin position="25"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="69"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="138" mass="14395" checksum="75259EBF5547BFEB" modified="2014-02-19" version="1">MASFWSFLVMLMALMACNCSLALASRQNMHVSTISAAPTTLPGPPLQFSPAMSPDIEPLFPTPRGAAFSPSESSIPTIPSSPSPPNPDVTNNPGSALAFPPSESMPALAPSSHGVSLPLYSVLHLATLVICIRQLHGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFU5</accession>
    <name>V7BFU5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G182000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFU5"/>
    <dbReference type="Gramene" id="ESW16749">
        <property type="protein sequence ID" value="ESW16749"/>
        <property type="gene ID" value="PHAVU_007G182000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10485167at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="75" mass="9237" checksum="248A5C388B8A6C9D" modified="2014-02-19" version="1">MQMINGPMRVYYVQCRIPSNNIDSWNTFQFYKDFLNYFNYLTSKHFQYVFPLNYQYHQPTKLAKSCRFAEKVTEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHR1</accession>
    <name>V7BHR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="8">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G121400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the PPP phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="8"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHR1"/>
    <dbReference type="SMR" id="V7BHR1"/>
    <dbReference type="STRING" id="3885.V7BHR1"/>
    <dbReference type="Gramene" id="ESW16001">
        <property type="protein sequence ID" value="ESW16001"/>
        <property type="gene ID" value="PHAVU_007G121400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0374">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DECICKR"/>
    <dbReference type="OrthoDB" id="1930084at2759"/>
    <dbReference type="PhylomeDB" id="V7BHR1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07414">
        <property type="entry name" value="MPP_PP1_PPKL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.21.10:FF:000004">
        <property type="entry name" value="Serine/threonine-protein phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050341">
        <property type="entry name" value="PP1_catalytic_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031675">
        <property type="entry name" value="STPPase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668:SF495">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE PP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16891">
        <property type="entry name" value="STPPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="10">
        <location>
            <begin position="117"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="303"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW16001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="36826" checksum="B410B0540F9B39EC" modified="2014-02-19" version="1">MDQTLLDDIINRLLEVRGRPGKQVQLSESEIRQLCAASREIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKIKLNSTTTTKPGNSPAGVKSFMGRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIR1</accession>
    <name>V7BIR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G267300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the syntaxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIR1"/>
    <dbReference type="SMR" id="V7BIR1"/>
    <dbReference type="STRING" id="3885.V7BIR1"/>
    <dbReference type="Gramene" id="ESW17777">
        <property type="protein sequence ID" value="ESW17777"/>
        <property type="gene ID" value="PHAVU_007G267300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0810">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIAICCA"/>
    <dbReference type="OrthoDB" id="10255013at2759"/>
    <dbReference type="PhylomeDB" id="V7BIR1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031201">
        <property type="term" value="C:SNARE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005484">
        <property type="term" value="F:SNAP receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000149">
        <property type="term" value="F:SNARE binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048278">
        <property type="term" value="P:vesicle docking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006906">
        <property type="term" value="P:vesicle fusion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd15848">
        <property type="entry name" value="SNARE_syntaxin1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00179">
        <property type="entry name" value="SynN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.70:FF:000003">
        <property type="entry name" value="Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000008">
        <property type="entry name" value="Syntaxin 132"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045242">
        <property type="entry name" value="Syntaxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006012">
        <property type="entry name" value="Syntaxin/epimorphin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006011">
        <property type="entry name" value="Syntaxin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957:SF80">
        <property type="entry name" value="SYNTAXIN-121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05739">
        <property type="entry name" value="SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00804">
        <property type="entry name" value="Syntaxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00503">
        <property type="entry name" value="SynN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00914">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0007">Acetylation</keyword>
    <keyword evidence="5 7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="10">
        <location>
            <begin position="212"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="310"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="42"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="310"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="8">
        <location>
            <begin position="324"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW17777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="37313" checksum="62EE1D92902D599C" modified="2014-02-19" version="1">MNDLISGSFSRFRSERASPDRHHVIEMTGVGGDGAGGVKVNLDKFFEDVESVKEELKELEGLAQSLRRSHEQSKTLHNANAVKDLRSRMDGDVSVALKKAKLIKLKLEALDRSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLKDSMESFNEIRQLVSSEYRETVQRRYFTVTGENPDDNTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKELEKSLKELHQVFLDMTVLVQHQGEQLDDIESHVARAQSFVHTGTEQLQTARKHQKNTRKWTCYCIILLLVIILVVVLSIVRPWEGSSNSGNGGNQSTPAQTPPSPPPPAQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIZ4</accession>
    <name>V7BIZ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Albumin-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G277000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIZ4"/>
    <dbReference type="Gramene" id="ESW17887">
        <property type="protein sequence ID" value="ESW17887"/>
        <property type="gene ID" value="PHAVU_007G277000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HQRVNMR"/>
    <dbReference type="OrthoDB" id="756060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.110.10.10">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036375">
        <property type="entry name" value="Hemopexin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018487">
        <property type="entry name" value="Hemopexin-like_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00045">
        <property type="entry name" value="Hemopexin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00120">
        <property type="entry name" value="HX"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50923">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51642">
        <property type="entry name" value="HEMOPEXIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="197"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="250"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="308" mass="35213" checksum="DA3ACFBF60CA48BC" modified="2014-02-19" version="1">MTEHQRVNMRKEIREEKGGMTEHQRVNMRKELNGKCDKKIGVPYSFFYSRKGNFTSLIVKKVYLSMITRRNDDVVESPFFRKMAYINAAFRSSRDYEVYFFMKDKYVRVHYTPGSTDDKILTNLRLISSGFPSLEATFFAEPGMDCAFVTEGNEAYVFSTKYCAYIDYAPGTTNDKILSGPTTIAKMFPVLKNTVFENGIDSAFRSTKGKEVYLFKGNQYARIDYDSKQLVGTIRNIADGFPVLKGTIFESGIDACFASHEESEAYLFKGDEYVRMKFTPDAYDDVLLGDVRPILDGWTCLRGILPVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJF4</accession>
    <name>V7BJF4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">histidine kinase</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G215000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJF4"/>
    <dbReference type="SMR" id="V7BJF4"/>
    <dbReference type="STRING" id="3885.V7BJF4"/>
    <dbReference type="Gramene" id="ESW17150">
        <property type="protein sequence ID" value="ESW17150"/>
        <property type="gene ID" value="PHAVU_007G215000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0519">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCILYVH"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17546">
        <property type="entry name" value="REC_hyHK_CKI1_RcsC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050956">
        <property type="entry name" value="2C_system_His_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43719:SF75">
        <property type="entry name" value="HISTIDINE KINASE CKI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43719">
        <property type="entry name" value="TWO-COMPONENT HISTIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="CheY-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="Homodimeric domain of signal transducing histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-0675">Receptor</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="297"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="355"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="10">
        <location>
            <begin position="947"/>
            <end position="1069"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="7">
        <location>
            <position position="1004"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW17150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1072" mass="119039" checksum="3AFD12D4C96FD419" modified="2014-02-19" version="1">MNSKNSVPQLQSEIEHLAQMLHPMKSSSTNMARFLSSVLDDITNVSFSHIKTKVAPLMFEAFQTVPYLVQISYIGVEGLFFSYYTHNDEALAMYSNSSSSSWGAFNKIYTQPVNRETGEVHGEATNIVSNPFMNASWIGEALNVTSGFSSLGTKWDNGDLLFLTSAGIMTRGVISLGFSATPITDFVTRIDQQHGTTSYLATKDEKIVVEGIQLTHFLISNDTVSFQSVDANGDPTSNEGTVSCKDGAVASFFNIRDTAYSIHCYTIDIMGIESVYVLGVPEERYGRIYQNYKKKGLIVFVITMVTIFVAFFSFLYINCEAFRREMHLCASLIKQCEATQQAEKKNMNKSAAFASASHDVRASLAGITGLIELSSELVAPGSELETNLKQMNGCTQDLLGLLNSILDTSKIEAGKMQLEEEEFDVFHLLEDVVDFYHPVAVKKGVDLVLDPCNGSVVGYSRVKGDRGKLKQVLCNLLSNAVKFTDEGHIAVRAWTRKPKLLQNSTVTFNQLGSKKYLSCLFCNETEARSDVESTRSIQEDPHFMDFIFEVDDTGKGIPKENYKSVFENYVQIKNTALGQGGTGLGLGIVQSLVRLMHGDIEIVEKDIGEKGTCFKFNVLLTVCENEAPSDGSRREGIGCGSGDRMQGQEQTMHASCSGSSRICTMSPRLRICSSSPKPEASLVVLLIVDEERQRTSRRFLERLGIKVKVVTTEKSLFYTLRKIKQKAKHSSGHNSPGSSDLSYCSTPHSSLDIATRVSLEGTELMPLVFKKTDMGASPCFILIVIDANAGPFSELYTIVSNFKKDLRNPCKVVWLDKPFMRRINLKALNQDDIVTSKPFHGTRLFQTIKLLPEFGGAWESNSSRAKREMTNERATLKTCKDPGLSKYTFPLLDRSQVSSTDKSTFQTTEQIRKGKRPFKAKITLVHRGETQEVGNSSGCHKPLRGKKFLVADDTSFLRNIASATLISLGATVEQCENGEQAVRLVDEGLPREFPHPPYDYILMDCQMPIMDGLEATKWIRRIEKAYDIHIPIIALTAGTERITIESGMDYHMVKPINREELLKAITYIDGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJG9</accession>
    <name>V7BJG9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G016000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJG9"/>
    <dbReference type="Gramene" id="ESW18139">
        <property type="protein sequence ID" value="ESW18139"/>
        <property type="gene ID" value="PHAVU_006G016000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SCSH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHDLCSE"/>
    <dbReference type="OrthoDB" id="1405557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033249">
        <property type="entry name" value="CLE_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34545">
        <property type="entry name" value="CLAVATA3/ESR (CLE)-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34545:SF1">
        <property type="entry name" value="CLAVATA3_ESR (CLE)-RELATED PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754413" evidence="2">
        <location>
            <begin position="34"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW18139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="90" mass="10073" checksum="A227F06F634A6BAC" modified="2014-02-19" version="1">MHDLCSESMRLIGLACFSLLMLVLLLFQRFSSATNESGIFQNFKTGYMSKSNSIQDKQGLRQNSTEGGSEAILGDEKRKIYTGPNPLHNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK98</accession>
    <name>V7BK98_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF7651 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G241400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK98"/>
    <dbReference type="STRING" id="3885.V7BK98"/>
    <dbReference type="Gramene" id="ESW17458">
        <property type="protein sequence ID" value="ESW17458"/>
        <property type="gene ID" value="PHAVU_007G241400g"/>
    </dbReference>
    <dbReference type="OMA" id="EYCLLAK"/>
    <dbReference type="OrthoDB" id="1426699at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031490">
        <property type="term" value="F:chromatin DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056068">
        <property type="entry name" value="EMF2-like_DUF7651"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22597">
        <property type="entry name" value="POLYCOMB GROUP PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22597:SF22">
        <property type="entry name" value="POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24663">
        <property type="entry name" value="DUF7651"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="DUF7651" evidence="3">
        <location>
            <begin position="4"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF24663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="158" mass="17926" checksum="4EA04E2ADC9AACF9" modified="2014-02-19" version="1">MSIEVKAEFKLPEINKLAKEAKSGKIDVLFVSTPTVEDSYFSQGVNSNSSPLDLNHLPFPELGEFCLMGKMSLESLYKSWTYFPTFRLGKRAELFSTVGMHPCLLQSVFEIDDAKFTIHVPPNIKNMNASRELHVRISAEQFGFKETSSGPHHFLRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKS7</accession>
    <name>V7BKS7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G054200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKS7"/>
    <dbReference type="SMR" id="V7BKS7"/>
    <dbReference type="STRING" id="3885.V7BKS7"/>
    <dbReference type="Gramene" id="ESW18599">
        <property type="protein sequence ID" value="ESW18599"/>
        <property type="gene ID" value="PHAVU_006G054200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLPFMRY"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11072">
        <property type="entry name" value="CYP71-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000008">
        <property type="entry name" value="Cytochrome P450 71D8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955:SF8">
        <property type="entry name" value="CYTOCHROME P450 71D11-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955">
        <property type="entry name" value="CYTOCHROME P450 FAMILY 71 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="435"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW18599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="494" mass="55752" checksum="1577CE3CC832BED6" modified="2014-02-19" version="1">MDLQTLYVLSIVIFMFIAHKIITKKCASTSNLPPGPWKLPIIGNIHNLVGSLPHRRLRDLSAKYGPLMHLKLGEVSTIVVSSAEYAKEVLKTHDLIFASRPPILASKILSYDSVGISFSPYGDYWRQLRKICALELLSLKRVQSFQPIREEELTKFIKNIASKEGSPINLTKEILSTISTIVSRTALGSKYRDHKKFISAVREATEVAGGFDLGDLYPSAGWLQHISGLKGKLEQSHQQTDRIMQRIIDDHREAKSRAAQAQGEQVEDDLVDVLMKEEFGLSDNSIKAVILDIYGGGSETSSITITWAMAEMIKNPRVMKKVQSEVREVFGKEGGPNESDMENLKYLKSVVKETLRLHPPGPLLLPRESGQACEIKGYHIPIKSKIIVNAWAIGRDPNHWTEAERFYPERFIESDFDYKGNNFEYIPFGAGRRMCPGLTFGLTNVEFPLALLMYHFDWKLPNGMRNEDLDMTEVFGVSVSRKHDLQLIPVTFHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLH8</accession>
    <name>V7BLH8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">chlorophyllase</fullName>
            <ecNumber evidence="4">3.1.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G278100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>a chlorophyll + H2O = a chlorophyllide + phytol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17327"/>
            <dbReference type="ChEBI" id="CHEBI:139291"/>
            <dbReference type="ChEBI" id="CHEBI:139292"/>
            <dbReference type="EC" id="3.1.1.14"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:19606"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; chlorophyll degradation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the AB hydrolase superfamily. Lipase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.14" evidence="4"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLH8"/>
    <dbReference type="SMR" id="V7BLH8"/>
    <dbReference type="STRING" id="3885.V7BLH8"/>
    <dbReference type="ESTHER" id="phavu-v7blh8">
        <property type="family name" value="Chlorophyllase_Plant"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17905">
        <property type="protein sequence ID" value="ESW17905"/>
        <property type="gene ID" value="PHAVU_007G278100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRKW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPAWYFV"/>
    <dbReference type="OrthoDB" id="2093222at2759"/>
    <dbReference type="UniPathway" id="UPA00674"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047746">
        <property type="term" value="F:chlorophyllase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015996">
        <property type="term" value="P:chlorophyll catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000159">
        <property type="entry name" value="Chlorophyllase-2, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048264">
        <property type="entry name" value="Chlorophyllase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017395">
        <property type="entry name" value="Chlorophyllase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33428:SF2">
        <property type="entry name" value="CHLOROPHYLLASE-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33428">
        <property type="entry name" value="CHLOROPHYLLASE-2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07224">
        <property type="entry name" value="Chlorophyllase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038128">
        <property type="entry name" value="Chlorophyllase_chloroplast"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0881">Chlorophyll catabolism</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="9">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="9">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00053022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR038128-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="313" mass="34651" checksum="7B59C4C4B3B6790A" modified="2014-02-19" version="1">MCSYICSYLSSTSVFDTGKYTTEILRVESESYTQNNVPPPKPLLIATPHEAGEFSVLIFLHGYLLYNSFYSQLIQHVASHGFIVIAPQLYTVAGPDTSDEIHSAAAITNWLSEGLCKFLPPNVIPNLNKVALSGHSRGGKTAFALSLRRLNISTDIKFSALIGVDPVDGMDKGKQIPPPVLTYVPHSFDLDMPVMVIGSGLGEVKRNPLFPPCAPKGVNHENFFKECKKPAWYFVAKDYGHSDMLDDDTKGIRGKATYCLCKNGDSRKPMRRFVGGVIVAFLKAYLQDDYGDLLAIRDMHVSLPLEFKFDSYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLZ9</accession>
    <name>V7BLZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G009900g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLZ9"/>
    <dbReference type="STRING" id="3885.V7BLZ9"/>
    <dbReference type="Gramene" id="ESW18060">
        <property type="protein sequence ID" value="ESW18060"/>
        <property type="gene ID" value="PHAVU_006G009900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S59X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PMSESPM"/>
    <dbReference type="OrthoDB" id="785314at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00010">
        <property type="entry name" value="AAI_LTSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.110.10:FF:000001">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043325">
        <property type="entry name" value="LTSS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33044">
        <property type="entry name" value="BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14368">
        <property type="entry name" value="LTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754491" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="10">
        <location>
            <begin position="24"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="11">
        <location>
            <begin position="42"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="136"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="136"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW18060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="202" mass="20082" checksum="0281A687F20358D1" modified="2014-02-19" version="1">MITTTATTVTITILLTLACCATSAPSPAPETAAAPAPAMNGCLMALANMSNCLTFVEDGSNLTKPDKGCCPELAGLIDSNPICLCELLGKPDTIGIKIDLNKAIKLPSICGVSTPPVSTCSAVGVPVSLPPSISEGSLSPSMAPGASGSSNDAASSPGGAAPSSSDASNSPTESKNGVSAIETSAFTNFIFGLFTLFLSSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN10</accession>
    <name>V7BN10_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Disease resistance R13L4/SHOC-2-like LRR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G041200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN10"/>
    <dbReference type="Gramene" id="ESW18440">
        <property type="protein sequence ID" value="ESW18440"/>
        <property type="gene ID" value="PHAVU_006G041200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KINPWIR"/>
    <dbReference type="OrthoDB" id="1934998at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186:SF45">
        <property type="entry name" value="DISEASE RESISTANCE RPP13-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="4">
        <location>
            <begin position="571"/>
            <end position="802"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="14"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="195"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="289"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="344"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="200"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="299"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="310"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="328"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="857" mass="97513" checksum="5E20261FD4B70855" modified="2014-02-19" version="1">MGWRSHIYVGIKTFHRSDKPSSSDEAKEKSEEKDETIDGKLENLTFMLEHLKDNFSTVKKNEELRKTLREVENLLQCFNSKLAEEANENETKRLEQPSQTSTEEEMNQHFIDEEFKVTDIGKPPPSQETQDKKSIVENDVGIDEKFESLKFKLDKMKAISFTVKEDKELRDKLRVMEDLLRNFNGKSLHNIVNSIEDSNQSEKKSSELPDQTSRDDQDLKTTGEDKPSLDQEPEKYVAIDEKLESLKLELDNMKAKFSPVKENEEMRDTLRTLEDLLQSFDKKSLAEIVNPAEDENQSETEGSSQISRGQLEDQDLKGFDKSSQNQETQDKESVEKDVSVDEKVESLKSEVDNKKANLVRLNTNELPKVLRAEENLIKNTDKNISSENREDSKEEMVGKVVEAISKEIKKSTEKLGFSPTKTKADESSGKGKTSKELHYPILSLSQAHNDVELVLKRFQASYDVLDSHSKVCSYGMVKCPVVSKFKINPWIRHMLVSSVLGEDKQPFGFYSQIITPSHHNGTGHACLVLDQEKVQIGGEFDSKSDHCKSVFNLGANYLTIEPRWMAKMKKLVVLQLGRWQESPSHHIEVASTEFMTDLKAQKHLKYLSLRGISRISELPPSIAQLVSLQILDLKACHNLETLPNEITSLRKLTHLDVSQCYLLERMPKGIEKLTELQVLKGFVVGNSDKTPRVSDLVNFKKLKRLSIHIGSEAVIQDKEFESLEGLLVKCLKISWGVSSNTKYQDIDISLPQSLEKLNLEAFPSLKTPKWLKLNTLPPGLKRLYIVGGKLTSLEKEKGSTISCKVEILRLKYLRKLQMDDLKNLGELFPSLKYAEVNKTRIIPLNGRLINDGESTIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNG5</accession>
    <name>V7BNG5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Endoglucanase</fullName>
            <ecNumber evidence="10">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G133700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the glycosyl hydrolase 9 (cellulase E) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="10"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNG5"/>
    <dbReference type="SMR" id="V7BNG5"/>
    <dbReference type="STRING" id="3885.V7BNG5"/>
    <dbReference type="Gramene" id="ESW19539">
        <property type="protein sequence ID" value="ESW19539"/>
        <property type="gene ID" value="PHAVU_006G133700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUUK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHYPKHV"/>
    <dbReference type="OrthoDB" id="10257085at2759"/>
    <dbReference type="PhylomeDB" id="V7BNG5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.10:FF:000020">
        <property type="entry name" value="Endoglucanase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001701">
        <property type="entry name" value="Glyco_hydro_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033126">
        <property type="entry name" value="Glyco_hydro_9_Asp/Glu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018221">
        <property type="entry name" value="Glyco_hydro_9_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22298">
        <property type="entry name" value="ENDO-1,4-BETA-GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00759">
        <property type="entry name" value="Glyco_hydro_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="Six-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00592">
        <property type="entry name" value="GH9_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00698">
        <property type="entry name" value="GH9_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 10" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="6 8 10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 8 10" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 9" evidence="13">
        <location>
            <begin position="109"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="513"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="561"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="570"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW19539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="619" mass="68468" checksum="DD972D4696367670" modified="2014-02-19" version="1">MYGRDPWGGPLEINATDSATEEDRSRNLQDLDRAALSRPLDETQQSWLLGPGEQKKKKYVDLGCIIVSRKIFVWTVGTVLFAAFLAGFIALIVNTIPRHHHKHPPPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSGMQDGKSSDTSSAIKDLVGGFYDAGDAIKFNFPASFSITMLSWSVIEYSAKYEAAGELDHVKEIIKWGTDYFLKSFNSTADTITTLAAQVGVGNTADGSTTPNDHYCWMRPEDMDYERPVTECHSCSDLAAEMAAALASASIVFKDNKAYSKKLVHGATTLFKFSRDQRGRYSAGSSEASIFYNSTSYWDEYVWGGAWMYFATGNSSYLKLATAPGLAKHAGAFWGGSDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILRTFHNQTSIIMCSYLPVFTSFNRTKGGLIQLNHGRPQPLQYVVNAAFLAALYSDYLDAADTPGWYCGPNFFSTDVLRNFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKVKYNCKGGWKWRDSSKPNPNTLVGAMVAGPDKHDGFRDVRSNYNYTEPTLAGNAGLVAALVALSGDKSTSIDKNTIFSAVPPMFPTPPPPPAPWKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ75</accession>
    <name>V7BQ75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hexosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G104100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the glycosyltransferase 8 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ75"/>
    <dbReference type="STRING" id="3885.V7BQ75"/>
    <dbReference type="Gramene" id="ESW19195">
        <property type="protein sequence ID" value="ESW19195"/>
        <property type="gene ID" value="PHAVU_006G104100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1950">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ALLFCYY"/>
    <dbReference type="OrthoDB" id="2014201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02537">
        <property type="entry name" value="GT8_Glycogenin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000067">
        <property type="entry name" value="Hexosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050587">
        <property type="entry name" value="GNT1/Glycosyltrans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11183">
        <property type="entry name" value="GLYCOGENIN SUBFAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="280"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="395"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="457"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="486"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW19195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="531" mass="59595" checksum="EDFDE9482DB7043B" modified="2014-02-19" version="1" fragment="single">GQFQGCVGSKTKRTDEAYVTLLYGDEFLLGVRVLGKSIRNTGSSKDMVVLVSDGVSDYAKSLLRADGWIVELISLLANPNRVRPKRFWGVYTKLKIFNMTDYKKVVYLDADTIVVKSIDDLFKCVKFCANLKHSERLNSGVMVVEPSQTVFNDMISKIKTTASYTGGDQGFLNSYFSGFPNAHVFEPNLSPEVLNSRPVPEMERLSTLYNADVGLYMLANKWMVDENELRVIHYTLGPLKPWDWWTSWLLKPVDVWQDVREQLEESLPGTGGGQNPKDSFLVKFLFLLPLCALLFLCYHSFMKNQGHFSSFCRSSLCDQARHLYYRIRSSGPLIYTSISTSTTNSIHQLLHGAQNKVPAYLGGLSVCVCFMVAVVSLGLSLLIVPRQVMPWTGLLLMYEWTYTIFFILFGGYLRLIYQWGKIVGSRVASSLSDPGSSNHDSEKRHQRPVSSCDITTWYYGLGMALLAIAAPSLPCLFGITALFVRLGLMVVGGIILASFMTYASEHLAIRSFLKGFDERDIAWSSNSCFLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRF7</accession>
    <name>V7BRF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Rubredoxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G099300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRF7"/>
    <dbReference type="SMR" id="V7BRF7"/>
    <dbReference type="STRING" id="3885.V7BRF7"/>
    <dbReference type="Gramene" id="ESW19136">
        <property type="protein sequence ID" value="ESW19136"/>
        <property type="gene ID" value="PHAVU_006G099300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3MR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HPKPKTQ"/>
    <dbReference type="OrthoDB" id="6379857at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043448">
        <property type="term" value="P:alkane catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00730">
        <property type="entry name" value="rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.28.10:FF:000001">
        <property type="entry name" value="Rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024934">
        <property type="entry name" value="Rubredoxin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024935">
        <property type="entry name" value="Rubredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050526">
        <property type="entry name" value="Rubredoxin_ET"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018527">
        <property type="entry name" value="Rubredoxin_Fe_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47627">
        <property type="entry name" value="RUBREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47627:SF1">
        <property type="entry name" value="RUBREDOXIN-1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00301">
        <property type="entry name" value="Rubredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00163">
        <property type="entry name" value="RUBREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57802">
        <property type="entry name" value="Rubredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00202">
        <property type="entry name" value="RUBREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50903">
        <property type="entry name" value="RUBREDOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="179"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin-like" evidence="7">
        <location>
            <begin position="101"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW19136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="199" mass="21845" checksum="ED8F417AAB55B1CB" modified="2014-02-19" version="1">MKNQPSLTAGSTFQLTMACVTPPPPFSLHFSTFSLKSKHKPHSLPSLFAKSFSKPRKLTVNSIDVSKEDTAPTPTPTPAPEPVAENLDSRRLEEKFAVLNTGIFECRSCGYKYDEAVGDPSYPLPPGFQFEKLPDDWRCPTCGAAQSFFESKSVQIAGFAQNQQYGLGGNSLTSGQKTILIYGTLLLFFALFLSGYFLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT01</accession>
    <name>V7BT01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal phosphate homeostasis protein</fullName>
            <shortName evidence="1">PLP homeostasis protein</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G147100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'-phosphate (PLP), the active form of vitamin B6.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT01"/>
    <dbReference type="SMR" id="V7BT01"/>
    <dbReference type="STRING" id="3885.V7BT01"/>
    <dbReference type="Gramene" id="ESW19691">
        <property type="protein sequence ID" value="ESW19691"/>
        <property type="gene ID" value="PHAVU_006G147100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EWHLIGN"/>
    <dbReference type="OrthoDB" id="10264196at2759"/>
    <dbReference type="PhylomeDB" id="V7BT01"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06822">
        <property type="entry name" value="PLPDE_III_YBL036c_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.10:FF:000014">
        <property type="entry name" value="Pyridoxal phosphate homeostasis protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="entry name" value="Alanine racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02087">
        <property type="entry name" value="PLP_homeostasis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011078">
        <property type="entry name" value="PyrdxlP_homeostasis"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00044">
        <property type="entry name" value="YggS family pyridoxal phosphate-dependent enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10146">
        <property type="entry name" value="PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10146:SF15">
        <property type="entry name" value="PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004848">
        <property type="entry name" value="YBL036c_PLPDEIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="PLP-binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alanine racemase N-terminal" evidence="4">
        <location>
            <begin position="13"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="1 2">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR004848-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="25974" checksum="ED02C4D00F7755CA" modified="2014-02-19" version="1">MASSAAPSLNAVLDRVQGATERSGRNVQEIRVVAASKTKSVSALRQVYDAGHRFFGENYVQELLQKAPQLPGDIEWHLIGNLQSNKVKPLIAGVPNLACVESVDDEKIANLLDRAVANVGRKPLKVFVQVNTSGETSKFGVEPAVCVDLVKHITNCSNLEFSGLMTIGMLDYSSTPENFKMLSNCRTEVCKALGISETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYQTKEEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTB2</accession>
    <name>V7BTB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G195500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTB2"/>
    <dbReference type="STRING" id="3885.V7BTB2"/>
    <dbReference type="Gramene" id="ESW20280">
        <property type="protein sequence ID" value="ESW20280"/>
        <property type="gene ID" value="PHAVU_006G195500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0WD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ATENMPH"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051358">
        <property type="entry name" value="TF_AMS/ICE1/BHLH6-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31945:SF20">
        <property type="entry name" value="TRANSCRIPTION FACTOR DYT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31945">
        <property type="entry name" value="TRANSCRIPTION FACTOR SCREAM2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="41"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="80"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="24680" checksum="BAA945345CBF5363" modified="2014-02-19" version="1">MEYEDEDWLCVTMEEFSLATENGCTKQGIGRKRNYDDDTREFKSKNLETERRRREKLSSRLLMLRAIVPIITNMNKATIIEDAITYIEKLQDKVQSLSQELHQMEATSEETAEAKIDEIDAAQDMKNLGIQEEVRVAQIDGNKLWVKIIIEKKRGRFRKLMEALNNFSIELIDTNLTTTKGAFLITSCIQDRDGEKLEIQQTKDLLQDIINGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUF0</accession>
    <name>V7BUF0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G084100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUF0"/>
    <dbReference type="SMR" id="V7BUF0"/>
    <dbReference type="Gramene" id="ESW21604">
        <property type="protein sequence ID" value="ESW21604"/>
        <property type="gene ID" value="PHAVU_005G084100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXQV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LNHRSMD"/>
    <dbReference type="OrthoDB" id="6078042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31008">
        <property type="entry name" value="COP1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31008:SF16">
        <property type="entry name" value="TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TIR" evidence="1">
        <location>
            <begin position="30"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="202" mass="23586" checksum="62698B40E31F2C24" modified="2014-02-19" version="1">MQRNVAMSFFQRRFLSQPKLEQVMARRVVEPCDVFLNHRSMDTKKTVATLMYDHLKRHGFNPFLDNKTMKPGDKLFDKINRAVMECKIGVAVLSPRYTESYFCLHELALLFGCNKKVIPIFCDVKPSQLRLVNNPKWSQDELRRFRWALEEVKYTVGLTFNSSKGNLSEIVNSASDIIIGSMVELKNEERMQRKRKNLPIPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV39</accession>
    <name>V7BV39_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 20">Peroxidase</fullName>
            <ecNumber evidence="4 20">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_006G209100g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="17 20">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="17 20">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="20">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="20">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 20"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV39"/>
    <dbReference type="SMR" id="V7BV39"/>
    <dbReference type="STRING" id="3885.V7BV39"/>
    <dbReference type="Gramene" id="ESW20436">
        <property type="protein sequence ID" value="ESW20436"/>
        <property type="gene ID" value="PHAVU_006G209100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ2G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SIVRMGQ"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7BV39"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000010">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000008">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31235">
        <property type="entry name" value="PEROXIDASE 25-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 17 20" id="KW-0106">Calcium</keyword>
    <keyword evidence="13 19" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 20" id="KW-0349">Heme</keyword>
    <keyword evidence="14 20" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="12 17 20" id="KW-0408">Iron</keyword>
    <keyword evidence="8 17 20" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 20" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 20" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 20" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149029" description="Peroxidase" evidence="20">
        <location>
            <begin position="22"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="21">
        <location>
            <begin position="22"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="18">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="32"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="65"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="115"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="193"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW20436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="35081" checksum="B832098E4E0F8584" modified="2014-02-19" version="1">MMMLGVLSLLFFSFLMGCSEGQLQVGFYSNTCPQVDSIVRDVVREAALSDTSMAAVLLRLHFHDCFVEGCDGSILIDNGPQSERQAFGHQGVRGFDVIEKAKAQLEGSCPGVVSCADIVALAAREAIVMANGPTYQVPTGRRDGLVSNISLADDMPDVSDSIEVLKTKFLNKGLTVKDLVLLSGAHTIGTSACFFMTNRLYNFFPSGGGSDPSISPNFLPQLQTKCPQNGDVNVRLALDEGSEQNFDIHILKNIREGFAVLESDARLNDDIATKGVLDSYFTPFGPLFEPSFEADFVDSFVRMGQIGVKTGFLGEIRSVCSEFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVH0</accession>
    <name>V7BVH0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PB1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G219400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVH0"/>
    <dbReference type="STRING" id="3885.V7BVH0"/>
    <dbReference type="Gramene" id="ESW20561">
        <property type="protein sequence ID" value="ESW20561"/>
        <property type="gene ID" value="PHAVU_006G219400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWRI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCCCDEC"/>
    <dbReference type="OrthoDB" id="1882326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="CDD" id="cd06410">
        <property type="entry name" value="PB1_UP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053198">
        <property type="entry name" value="Gynoecium_Dev_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000270">
        <property type="entry name" value="PB1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066">
        <property type="entry name" value="OS05G0427100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066:SF47">
        <property type="entry name" value="PB1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00564">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00666">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PB1" evidence="2">
        <location>
            <begin position="24"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="210"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="228"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="31080" checksum="2B9C3F895D3FFA21" modified="2014-02-19" version="1">MGEDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVHRDITFSELMKKVGSMVEGEVVLKYQLVPEDLDALVSVRTEEDVKHMIQEHDRHHTGLLRAFLFPPFRPPLPASEPYLLEQRYIDAINGILRTSPRATRGSACSSPVSTSPDAGDMYSPRFPNSNSHCSAMQRVRSSPNLTNMGGLDQQGHHYQQHHPHLPFHNYPSFSTSRPPQDPQMGRLGGRGTSINYHYSNTRQQPHRGGGYGGYPDDSAAYGNAHLPLHSLSRSPRRKTVWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZB8</accession>
    <name>V7BZB8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Gibberellin-regulated protein 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G028800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GASA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZB8"/>
    <dbReference type="SMR" id="V7BZB8"/>
    <dbReference type="STRING" id="3885.V7BZB8"/>
    <dbReference type="Gramene" id="ESW23224">
        <property type="protein sequence ID" value="ESW23224"/>
        <property type="gene ID" value="PHAVU_004G028800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S17T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHHYNDK"/>
    <dbReference type="OrthoDB" id="1886938at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003854">
        <property type="entry name" value="GASA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201">
        <property type="entry name" value="EXTENSIN, PROLINE-RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201:SF137">
        <property type="entry name" value="GIBBERELLIN-REGULATED FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02704">
        <property type="entry name" value="GASA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755196" description="Gibberellin-regulated protein 6" evidence="2">
        <location>
            <begin position="28"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="110" mass="12259" checksum="19D3D860F497A001" modified="2014-02-19" version="1">MAVTAKLLSAFIIALIAISMLQTMVVASHGHGGHHYNDKKKYGPGSVKSYQCPSQCTRRCSRTQYHKPCMFFCQKCCMKCLCVPPGYYGNKAVCPCYNNWKTKRGGPKCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZP2</accession>
    <name>V7BZP2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G159800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZP2"/>
    <dbReference type="STRING" id="3885.V7BZP2"/>
    <dbReference type="Gramene" id="ESW22520">
        <property type="protein sequence ID" value="ESW22520"/>
        <property type="gene ID" value="PHAVU_005G159800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0264">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IREFPQK"/>
    <dbReference type="OrthoDB" id="427795at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050459">
        <property type="entry name" value="WD_repeat_RBAP46/RBAP48/MSI1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22850">
        <property type="entry name" value="WD40 REPEAT FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="123"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="168"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="217"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="96"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="99"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="344" mass="37623" checksum="8B2F52D61B1556DB" modified="2014-02-19" version="1">MVNRIREFPQKSHIVATHTDSPEVFIWDVEAQPNRNAVLGAATSRPDLVLTGHKDNAEFALAMCPSEPFVLSGGKDKCVVLWSVHDHISTLAVEEPTVKQGSKSGGNTAKATENPTIGPRGIYKGHTDTVEDVQFCPSSAQEFCSVGDDSRLILWDARVGSVPVVKVDKAHNGDLHCVDWSPHDLNFILTGSADNTVHMFDRRKLKSSGVGSPVYKFEGHEAAVLCVQWSPDKASVFGSAAEDGILNIWDHEKVGKTTDSAGSKLSNTPPGLFFRHAGHRDKVVDFHWSASDPWTVVSVSDDCESSGGGGTLQIWRMMDLIYRPEEEVLTELDKFRSHIFGCNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZZ0</accession>
    <name>V7BZZ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glabrous enhancer-binding protein-like DBD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G052300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GeBP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZZ0"/>
    <dbReference type="SMR" id="V7BZZ0"/>
    <dbReference type="STRING" id="3885.V7BZZ0"/>
    <dbReference type="Gramene" id="ESW23497">
        <property type="protein sequence ID" value="ESW23497"/>
        <property type="gene ID" value="PHAVU_004G052300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RQE9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELCEKVW"/>
    <dbReference type="OrthoDB" id="661680at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007592">
        <property type="entry name" value="GEBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053932">
        <property type="entry name" value="GeBP-like_DBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31662">
        <property type="entry name" value="BNAANNG10740D PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31662:SF33">
        <property type="entry name" value="DNA-BINDING STOREKEEPER PROTEIN TRANSCRIPTIONAL REGULATOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04504">
        <property type="entry name" value="GeBP-like_DBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glabrous enhancer-binding protein-like DBD" evidence="3">
        <location>
            <begin position="175"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="279"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="72"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="99"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="112"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="281"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="398" mass="44396" checksum="7F99089BEBB57BEA" modified="2014-02-19" version="1">MPQKRKKRPPPPIEDPPTASSSESEEGDDRPRSSQPHAAAAAPPPVAAAQVSSSEDEDDSSEEDKKQRSTLPASANPPSNAHPKSSFSESDTDSEPTRAKSKSKPKPKSKPTDQLQPQDQAQRSSAQVKPVSKRSIHKTDPKRLKKKRADAPSSSVANDATEEDGNKSGSQAKLFQRIWSPEDEVGILKGILEFISMTGQDPYRYADAFHSFIKKSLHVEFSSLQLKEKIRRMKKRCKTHLERQAEGKEPRLLKPHDQTLFEFSKKIWIDWPNGLVEKPKFNGKGRKPKKKESATTSVPKAKDNVLPQPSAPLLALPAPGEYDSGDVSLLYRKISCFEELDADEMKRGLTLIGESKRKELERRWNMLVHSEMELLANRSLLIGEQIKLISEALQSSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1K3</accession>
    <name>V7C1K3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G029700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1K3"/>
    <dbReference type="STRING" id="3885.V7C1K3"/>
    <dbReference type="Gramene" id="ESW23233">
        <property type="protein sequence ID" value="ESW23233"/>
        <property type="gene ID" value="PHAVU_004G029700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSJN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPNHTSM"/>
    <dbReference type="OrthoDB" id="496281at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018971">
        <property type="entry name" value="DUF1997"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34133">
        <property type="entry name" value="OS07G0633000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34133:SF8">
        <property type="entry name" value="OS07G0633000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09366">
        <property type="entry name" value="DUF1997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="241" mass="27966" checksum="95F845E67F2E5152" modified="2014-02-19" version="1">MGSILLNPSQPSFSDTLLAPLKNHKVHHHASASRNHRFKCNSISRTSSFHYRSSASVPLHEFPSASFNEYIEDKGRVIRSIFSESASQQLNKEEWRVKMSQVEALFLKCHPVIHITAKCKSEFHEYPPHIPHHITKYLEFQVTRVEFPDLNGDYMPPHFNMNAKGVLYLEKKGMHNWMKNHLDVNFNLDFPPLLDWVPHLVLQTILQSVLKNYVDDINNGSAVRLLADYNLFKRKKPKNLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1R0</accession>
    <name>V7C1R0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC-type xenobiotic transporter</fullName>
            <ecNumber evidence="3">7.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_004G100800g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>ATP + H2O + xenobioticSide 1 = ADP + phosphate + xenobioticSide 2.</text>
            <dbReference type="EC" id="7.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.2" evidence="3"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7C1R0"/>
    <dbReference type="Gramene" id="ESW24079">
        <property type="protein sequence ID" value="ESW24079"/>
        <property type="gene ID" value="PHAVU_004G100800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0054">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTIRIEF"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008559">
        <property type="term" value="F:ABC-type xenobiotic transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18579">
        <property type="entry name" value="ABC_6TM_ABCC_D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18580">
        <property type="entry name" value="ABC_6TM_ABCC_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03250">
        <property type="entry name" value="ABCC_MRP_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03244">
        <property type="entry name" value="ABCC_MRP_domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1560.10:FF:000003">
        <property type="entry name" value="ABC transporter C family member 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000169">
        <property type="entry name" value="ABC transporter C family member 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1560.10:FF:000002">
        <property type="entry name" value="ABC transporter C family member 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000508">
        <property type="entry name" value="ABC transporter C family member 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050173">
        <property type="entry name" value="ABC_transporter_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056228">
        <property type="entry name" value="ABCC10-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044746">
        <property type="entry name" value="ABCC_6TM_D1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044726">
        <property type="entry name" value="ABCC_6TM_D2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223:SF367">
        <property type="entry name" value="ABC-TYPE XENOBIOTIC TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24358">
        <property type="entry name" value="ABCC10_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-1278">Translocase</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="317"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="344"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="436"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="917"/>
            <end position="937"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="957"/>
            <end position="981"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="1026"/>
            <end position="1042"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="1048"/>
            <end position="1068"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="1146"/>
            <end position="1165"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="15">
        <location>
            <begin position="311"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="14">
        <location>
            <begin position="628"/>
            <end position="849"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="15">
        <location>
            <begin position="922"/>
            <end position="1198"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="14">
        <location>
            <begin position="1235"/>
            <end position="1469"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00034018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW24079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1481" mass="167223" checksum="E69C80413F7A602A" modified="2014-02-19" version="1">MMKEFWSMFCAEADCPGTRGKQPFCFDLKILKNPSSCFNQFLIFFFDVSVLAMLALIMIQKYLFRPFQGMFQMGRYSNLQKISSITNASLGLLYLCLGIWILEENLRKSHTLLPLNEWLLELFEGFRWFLVGLSVSLKLKQLPRSWLWLFTLITLFVSSIFCVLSVSYAINIRELHFKEALDVLSFPGAVLLLLCTYKASKREDNATRIDEDFYDSLNCHFNEVDPYNYVTPFAKAGFLSRMSFWWLNPLMKIGQEKTLQDEDMPKLPESDRAELCYLSFLEQLNKQKDKESLPQSSILWAIILCHRKDILMSGLFALLKVLTVCTGPVLLNAFISIAEGNGNFKYEGYVLVISLFIIKIVESLSQRQWYFHTRLVGMKVRSLLTASIYKKILRLSSAAKLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVILFRAIGLATIASLVVIVLTVLCNTPLAKMQHQFQTKLVVAQDKRLKVSSEALVNMKVLKLYAWDTHFKNAIERLRNMELKFLGAVQLIKAYNIILFWTSPVLVSSASFGACYFLNVPLHANNVFTFVATLRLVQEPIAAIPDVVGVVIQAKVAFARIVNFLEASELQSAKFRNRCFDDSNKGPISIKSADFSWEGNVSKSTLRNINLEIRHGQKLAICGEIGSGKSTLLTTILCEVPVTKGTIQVYGKFAYVSQTAWIQTGTIRENILFGSDLDAPRYQETLRRSSLLKDLELFPHGDLTQIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLFNEYIMNGLKEKTVLLVTHQVDFLPAFDSVLLMSNGKILEVAPYHHLLTSSREFQYLVNAHNETAGSDNLMNVFSSQRHSTSVRENTQAFMEKQLKATNENQLIKEEEREIGNTGLKPYLQYLNGKKGYAYFFMASFCHLMFVICQILQNSWMAANVDNTQVSTLRLIVVYFFIGVASIIFLLTRTLLVVAFGIQSSTYFFVQLLNTLFRAPMSFYDCTPLGRILSRVSSDLSIMDLDIPFILSFTVVGAIYLCSNLTVLAIVSWQVVVVSLPMVYAAIHLQRYYFSTAKELMRVNGTTKSFVANHITETTAGAVTIRAFEEEDRFFKKNLDLIDINASPFFHSFASNEWLIQRLEIISALLLTSAALCMVMLPPGTFSSGLVGLTLSYGFTLNASLVFLIQSQCSLENYIVSVERLNQYMHIPSEAPEVIEGNRPPSNWPVAGKVELNDLQVRYRPYGALILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDQQIWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCSMVLSISDGKLMEYDEPVNLMNKEGSLFKQLIKEYWSHFHSAESY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C353</accession>
    <name>V7C353_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nucleotide-diphospho-sugar transferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G142300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C353"/>
    <dbReference type="STRING" id="3885.V7C353"/>
    <dbReference type="Gramene" id="ESW24579">
        <property type="protein sequence ID" value="ESW24579"/>
        <property type="gene ID" value="PHAVU_004G142300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RDGW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RSAYPKL"/>
    <dbReference type="OrthoDB" id="540503at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044821">
        <property type="entry name" value="At1g28695/At4g15970-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005069">
        <property type="entry name" value="Nucl-diP-sugar_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46038">
        <property type="entry name" value="EXPRESSED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46038:SF13">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03407">
        <property type="entry name" value="Nucleotid_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="Nucleotide-diphospho-sugar transferase" evidence="2">
        <location>
            <begin position="126"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="316" mass="36299" checksum="4EAB732AF9A00DCF" modified="2014-02-19" version="1">MKVSSPGAAVEKVAGDGIKAWNSGGSHLLARRVMQLIMVLVGSAVLWMFLYSSASPFGSPTLLSHYFMDYSAKAEYDPKLKSVLRNASMKDNTVIITTLNDAWAEPGSIFDLFLESFRLGNQTKKFLKHLVVITWDQKAHTRCLALHKHCYHLETKGDNFTGEAFFMTADYLNMMWRRIEFLGSVLDMGYNFVFTDTDIMWLRDPFKRFYKDADFQIACDFFNGDSYNLDNYPNGGFNYVKSSSRTIRFYKFWFNSRSAYPKLHDQDVLNKIKKSAFISNMNLKIRFLSLIILAAFVSMQRTSTRSQQCMSIVVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C427</accession>
    <name>V7C427_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G097200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C427"/>
    <dbReference type="SMR" id="V7C427"/>
    <dbReference type="STRING" id="3885.V7C427"/>
    <dbReference type="Gramene" id="ESW24040">
        <property type="protein sequence ID" value="ESW24040"/>
        <property type="gene ID" value="PHAVU_004G097200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRMU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DTPNRGA"/>
    <dbReference type="OrthoDB" id="1435597at2759"/>
    <dbReference type="PhylomeDB" id="V7C427"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14703">
        <property type="entry name" value="bZIP_plant_RF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000083">
        <property type="entry name" value="Transcription factor VIP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044759">
        <property type="entry name" value="bZIP_RF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13690">
        <property type="entry name" value="TRANSCRIPTION FACTOR POSF21-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13690:SF86">
        <property type="entry name" value="TRANSCRIPTION FACTOR VIP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="8">
        <location>
            <begin position="172"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="54"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="109"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="295"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="197"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="83"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="113"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="319"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW24040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="332" mass="36163" checksum="CC748B921B5EC6D6" modified="2014-02-19" version="1">MDPKFIGKPPATLDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDASDLDISTLPSPLPLPSPGASGTVPIPVDSDESGGRPRPAGAPTGGHLRSLSVGSDFFDGYGFGGSEERSGGGKDGGERRVGHHRHSNSMDGSSTTSFEADSAMMIDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTSENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSTRLGAMAAGNPSSFGGIFNQLASQLAMQQLSNSAPQQPQHQPQVGMPPPPSGQNHPNFMDFNQQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4A5</accession>
    <name>V7C4A5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G1764002g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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    </dbReference>
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    <dbReference type="STRING" id="3885.V7C4A5"/>
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        <property type="gene ID" value="PHAVU_004G1764002g"/>
    </dbReference>
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        <property type="component" value="Chromosome 4"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
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        <property type="project" value="TreeGrafter"/>
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    </dbReference>
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            <position position="1"/>
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    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="111" mass="12641" checksum="1608CBEED4CE04EA" modified="2014-02-19" version="1" fragment="single">LLQYFRKSDPWIENSAPVHSVQLDSGAKKPSAFSATELEDELFRLFLKARFQPSNATGVAADSWMALMDRLLTLKNDCTQENEKKHVKENILKLIDIYYEALDAPKKGGRK</sequence>
</entry>
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    </protein>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
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        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
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            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7C711"/>
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        <property type="protein sequence ID" value="ESW24681"/>
        <property type="gene ID" value="PHAVU_004G1507000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="431027at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="41" mass="4692" checksum="E6C67A643C84C1EF" modified="2014-02-19" version="1" fragment="single">ISDNENFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8J3</accession>
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        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8J3"/>
    <dbReference type="STRING" id="3885.V7C8J3"/>
    <dbReference type="Gramene" id="ESW26464">
        <property type="protein sequence ID" value="ESW26464"/>
        <property type="gene ID" value="PHAVU_003G121900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHDQEPK"/>
    <dbReference type="OrthoDB" id="1752233at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.700">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372">
        <property type="entry name" value="DAUER UP-REGULATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372:SF18">
        <property type="entry name" value="GROUP 3 LEA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755482" evidence="2">
        <location>
            <begin position="23"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="306"/>
        </location>
    </feature>
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            <begin position="31"/>
            <end position="43"/>
        </location>
    </feature>
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            <end position="107"/>
        </location>
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        </location>
    </feature>
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            <begin position="285"/>
            <end position="302"/>
        </location>
    </feature>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="357" mass="39032" checksum="4E5C30507200A5B4" modified="2014-02-19" version="1">MASKVISVLVMAVMLLAMNCYCTSVGHMPSTKEEGRDFEEAKAKTTQTANKAMDTAKEGKEATESWTEWAKEKLTEGLGFKHDQEPKESTTKKVSDYADDAAQKSKDYASGTAQKTKDYTGDAAQKTKDYVGDAAQKTKDYVGDAAQKTKDYASDASDAAKKTKDYAAEKAKEYASDAGDAAKKTKDYSAQKTSDGAKKTKDYASDAAKKTKDYVSDTAQNAGQNVKDYASDAAQKTRDYSGDAAHKSKEASDYASDAAEKTKHYVDDAVRRSKEGSEYANDAAQRTKDYSSEATRKSKEACDYASDTAQKTNEYASDTAQKAKEKLHDFASGWYTNFRNISVLQTVYSVQKPFSQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9C8</accession>
    <name>V7C9C8_PHAVU</name>
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        <recommendedName>
            <fullName evidence="10">Aminomethyltransferase</fullName>
            <ecNumber evidence="10">2.1.2.10</ecNumber>
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        <alternativeName>
            <fullName evidence="10">Glycine cleavage system T protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G080400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">The glycine cleavage system catalyzes the degradation of glycine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>N(6)-[(R)-S(8)-aminomethyldihydrolipoyl]-L-lysyl-[protein] + (6S)-5,6,7,8-tetrahydrofolate = N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16945"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10492"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="2.1.2.10"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">The glycine cleavage system is composed of four proteins: P, T, L and H.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="10"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9C8"/>
    <dbReference type="SMR" id="V7C9C8"/>
    <dbReference type="STRING" id="3885.V7C9C8"/>
    <dbReference type="Gramene" id="ESW25963">
        <property type="protein sequence ID" value="ESW25963"/>
        <property type="gene ID" value="PHAVU_003G080400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2770">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPVQYPA"/>
    <dbReference type="OrthoDB" id="10263536at2759"/>
    <dbReference type="PhylomeDB" id="V7C9C8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005960">
        <property type="term" value="C:glycine cleavage complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.110:FF:000002">
        <property type="entry name" value="Aminomethyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1360.120:FF:000014">
        <property type="entry name" value="Aminomethyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1400:FF:000001">
        <property type="entry name" value="Aminomethyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1250.10:FF:000002">
        <property type="entry name" value="Aminomethyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.110">
        <property type="entry name" value="Aminomethyltransferase beta-barrel domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1400">
        <property type="entry name" value="Aminomethyltransferase beta-barrel domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1250.10">
        <property type="entry name" value="Aminomethyltransferase fragment"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="entry name" value="Probable tRNA modification gtpase trme, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006223">
        <property type="entry name" value="GcvT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GcvT/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GcvT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCVT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00528">
        <property type="entry name" value="gcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001567">
        <property type="entry name" value="PRK00389.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="AMINOMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757:SF2">
        <property type="entry name" value="AMINOMETHYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006487">
        <property type="entry name" value="GcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="Aminomethyltransferase beta-barrel domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103025">
        <property type="entry name" value="Folate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 10" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="GCVT N-terminal" evidence="11">
        <location>
            <begin position="40"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Aminomethyltransferase C-terminal" evidence="12">
        <location>
            <begin position="323"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR006487-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW25963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="407" mass="44234" checksum="D4AE3A9ECCC01922" modified="2014-02-19" version="1">MRGGLWQLGQLVTRRLAHGDKKAVARRCFASEAELKKTVFHDFHVVHGGKMVPFAGWSMPIQYKDSIMDSTINCRQNGSLFDVSHMCGLSLKGKDAAPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHITPIEAGLTWAIGKRRRAEGGFLGADVILKQLEEGPSIRRVGFISSGPPPRSHSEIQDEGGKNIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9P0</accession>
    <name>V7C9P0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G157500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9P0"/>
    <dbReference type="SMR" id="V7C9P0"/>
    <dbReference type="STRING" id="3885.V7C9P0"/>
    <dbReference type="Gramene" id="ESW26897">
        <property type="protein sequence ID" value="ESW26897"/>
        <property type="gene ID" value="PHAVU_003G157500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YCRMQME"/>
    <dbReference type="OrthoDB" id="1879995at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000158">
        <property type="entry name" value="pentatricopeptide repeat-containing protein At2g33680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000343">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g58590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000687">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g33170"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000955">
        <property type="entry name" value="Tetratricopeptide repeat (TPR)-like superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015:SF47">
        <property type="entry name" value="OS01G0374200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015">
        <property type="entry name" value="OS07G0578800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="147"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="281"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="382"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="483"/>
            <end position="517"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="732" mass="80733" checksum="A947AA40A53D198B" modified="2014-02-19" version="1">MPLPFPPQQVQVLRTLLHCTVNKELSRGRVLHARILRDGSFSFTHLANAVINLYAKCGHLAEANLVFDNIVHKDVVSWNCLINAFSQQQAHSSSSHVMRLFHRMMACTTVPNAHTFAGVFTAASNLADVSAGRLAHALAVKTACSEDVFAASSLLNLYCKTGLVAEARELFDEMPVRNAVSWATMISGYASKEFVYEAFELFELLRREKEGDNENEFVFTSVLSALTCHVFVDTGRQVHSLAVKNGLVCFVSVGNALVTMYAKCGSLEDALKTFELSGNKNSITWSAMVTGFAQSGDADKALKLFYNMHHSGVLPSEYTLVGVINACSDVCATVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIGDARKGFEYIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQMGRVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYGFSLEIPIGSALSAMYAKCGSLDDGCRIFWRMPSRDVISWNAMISGLSQNGRGIEALKLFEEMCSEGTKPDSVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGQLNEAKEFIESATVDHCLCLWRILLGACKNHRNYDLGAYAGEKLMELGSPESSAYVLLSSIYTALGKWEDVERVRGMMKTRGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLALKLLTKVMKDEGYQPLLDPLLPEIISNGLKDQEVSDEIQLRVCGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA22</accession>
    <name>V7CA22_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Auxin-induced protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G167700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimers and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Aux/IAA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA22"/>
    <dbReference type="SMR" id="V7CA22"/>
    <dbReference type="STRING" id="3885.V7CA22"/>
    <dbReference type="Gramene" id="ESW27032">
        <property type="protein sequence ID" value="ESW27032"/>
        <property type="gene ID" value="PHAVU_003G167700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S29N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RKKLCHQ"/>
    <dbReference type="OrthoDB" id="778717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033389">
        <property type="entry name" value="AUX/IAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003311">
        <property type="entry name" value="AUX_IAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734:SF38">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02309">
        <property type="entry name" value="AUX_IAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PB1" evidence="12">
        <location>
            <begin position="133"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="52"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="54"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW27032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="215" mass="24388" checksum="14FFFAFDA8576D2A" modified="2014-02-19" version="1">MELQLGLALSTSSSQLLDLNSHAYDSIFPFHHNNKRTFSQLIPTLSLLPLTPNHHQEDHHHHDNHTQCSTITNKDDEEDVEGVVGWPPVNYWRKKIRVDNCGDQEEVVGNNDNIVWVDQCHGHGCSATGRSNSLYVKVKMEGVGIARKVDLGMHQSFETLMETLMDMFGTGLQESNSYELAYQDKEGDWLLAQDVPWRSFVGCARRLKLVKSSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA40</accession>
    <name>V7CA40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="3 8">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G064500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FKBP-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3 8"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA40"/>
    <dbReference type="SMR" id="V7CA40"/>
    <dbReference type="STRING" id="3885.V7CA40"/>
    <dbReference type="Gramene" id="ESW25776">
        <property type="protein sequence ID" value="ESW25776"/>
        <property type="gene ID" value="PHAVU_003G064500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KQFRWIL"/>
    <dbReference type="OrthoDB" id="1902587at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070370">
        <property type="term" value="P:cellular heat acclimation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000008">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000012">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000017">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000022">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050754">
        <property type="entry name" value="FKBP4/5/8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46512">
        <property type="entry name" value="PEPTIDYLPROLYL ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46512:SF11">
        <property type="entry name" value="PEPTIDYLPROLYL ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54534">
        <property type="entry name" value="FKBP-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0697">Rotamase</keyword>
    <keyword evidence="5 9" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="55"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="171"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="288"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="9">
        <location>
            <begin position="480"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW25776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="569" mass="63845" checksum="2E1303FA143695B8" modified="2014-02-19" version="1">MDEDFEFPSAGSMEMPDEEMESSILKVGEEKEIGKMGLKKKLLKEGEGWDSPNSGDQVEVHYTGTLLDGTHFDSSRDRGTPFRFNLGQGQVIKGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKNIITEGEKWDNPKDLDEVFVKYEARLEDGTVISKSDGVEFTVEEGYFCRALAKAVKTMKKGEKVLLNVKPQYAFGESGRPASGEEGAVPPNASLEVDLELVSWKSVSDITKDGKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFIKKGYGDEQPFEFKIDEEQVIDGLEKAVKNMKKGEIALLIIQPEYAFGPSGSPQELAIIPPNSTLYYEVELLSFVKEKESWDLNTPEKIEGAGKKKEEGNALFKVGKYERASKRYEKAMKFIEYDSSFGDEEKQQSKALKITCNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYLHLVDLDLAEMDIKKALEIEPENRDVKMEYKLLKQKVREYNKKDAQFYGIMFAKMNKLEEARTATAKQEPVPMTIDSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBI2</accession>
    <name>V7CBI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G212900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBI2"/>
    <dbReference type="STRING" id="3885.V7CBI2"/>
    <dbReference type="Gramene" id="ESW27562">
        <property type="protein sequence ID" value="ESW27562"/>
        <property type="gene ID" value="PHAVU_003G212900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU97">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELDCESC"/>
    <dbReference type="OrthoDB" id="668456at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33623:SF4">
        <property type="entry name" value="DUF4378 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33623">
        <property type="entry name" value="OS04G0572500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="468" mass="53504" checksum="244E60FAC019A7DE" modified="2014-02-19" version="1">MAFTGAKPLCNTSLIHTSKHTPKRPLLLKDYLRDDLSSCSSNGFKSLPRRQCCTTVGFFVEKDPQLQRKTRSTLPPRRRRRSSVSVLQRASVAVINAIKSLPTSHKSGRAKRGVNTTGVLCRSLSRKLLSRSFWRKAAAVREEGSQGVPRRRTSFRELIMLDQEHHKATSFNEYTALAAPSFTTSSGCGSNSWGESEFTFASSESSNENYLLLETPKDCAPRRHKVEEEVVTKEYWTNEKEQFSPVSTLDCPFVDEEDIYKCRFRSTSTSTVVSFTKGGKQKHMHKRCHLESVAPLEPVVLEKRFARLELEDETLNHSTKQYSRVIVPAARTLKNLRHAKNNNIEENARSLLNFVKGSNPNNTLIINAENLLFDYFKKSIGECKGLDLSKKLHLCKVAEDWIDGQPQELYLDWEEEGGRCVYVREMEKCEEWKNYEQEIQQLGEDLANEFFTNLVNESVLDLMTRTNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEV3</accession>
    <name>V7CEV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glycine cleavage system H protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G006000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The H protein shuttles the methylamine group of glycine from the P protein to the T protein.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
        <text evidence="8">Binds 1 lipoyl cofactor covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 8">The glycine cleavage system is composed of four proteins: P, T, L and H.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the GcvH family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEV3"/>
    <dbReference type="SMR" id="V7CEV3"/>
    <dbReference type="STRING" id="3885.V7CEV3"/>
    <dbReference type="Gramene" id="ESW28649">
        <property type="protein sequence ID" value="ESW28649"/>
        <property type="gene ID" value="PHAVU_002G006000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3373">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEHEWIR"/>
    <dbReference type="OrthoDB" id="10264154at2759"/>
    <dbReference type="PhylomeDB" id="V7CEV3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005960">
        <property type="term" value="C:glycine cleavage complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd06848">
        <property type="entry name" value="GCS_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.100:FF:000011">
        <property type="entry name" value="Glycine cleavage system H protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00272">
        <property type="entry name" value="GcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002930">
        <property type="entry name" value="GCV_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033753">
        <property type="entry name" value="GCV_H/Fam206"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017453">
        <property type="entry name" value="GCV_H_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00527">
        <property type="entry name" value="gcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002270">
        <property type="entry name" value="PRK01202.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11715">
        <property type="entry name" value="GLYCINE CLEAVAGE SYSTEM H PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11715:SF27">
        <property type="entry name" value="GLYCINE CLEAVAGE SYSTEM H PROTEIN 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01597">
        <property type="entry name" value="GCV_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="6 8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="9">
        <location>
            <begin position="56"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-lipoyllysine" evidence="7">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR617453-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW28649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="17771" checksum="71482B372A7DDB75" modified="2014-02-19" version="1">MALRMWASSTANALKLSSASRPHLLPPFSFSRCLSTVLDGLKYAESHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGAVSKNSGFGAVESVKATSDINSPISGEIVEVNTKLTETPGLVNSSPYEDGWMIKVKPSDPSELESLLGPKEYTKFCEEEDASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFC6</accession>
    <name>V7CFC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Reticulon-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G021800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Endoplasmic reticulum membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFC6"/>
    <dbReference type="STRING" id="3885.V7CFC6"/>
    <dbReference type="Gramene" id="ESW28834">
        <property type="protein sequence ID" value="ESW28834"/>
        <property type="gene ID" value="PHAVU_002G021800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1792">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WMFRVGA"/>
    <dbReference type="OrthoDB" id="567788at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009617">
        <property type="term" value="P:response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003388">
        <property type="entry name" value="Reticulon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045064">
        <property type="entry name" value="Reticulon-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10994">
        <property type="entry name" value="RETICULON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10994:SF145">
        <property type="entry name" value="RETICULON-LIKE PROTEIN B13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02453">
        <property type="entry name" value="Reticulon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50845">
        <property type="entry name" value="RETICULON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="37"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="127"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="Reticulon" evidence="7">
        <location>
            <begin position="26"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW28834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="212" mass="24588" checksum="B0B02AED68009DA0" modified="2014-02-19" version="1">MSTEAKQETEHLTTPSYSSDVDNGVVKDVVFWRRKKLNAVVIVAATAAWVLMEVFEFNFLAVISWVAILVVASTFLYANMLRLLGKEPPNLSWLELTEETTRRIASKVRAWIQETIRWLLLVSVRKEWPVFVGVVAGLWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEEKIKRFGEWLREKYKRCYEIIDEKTIRKIKSRIPKEKKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIH6</accession>
    <name>V7CIH6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">MutL C-terminal dimerisation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G116900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA mismatch repair MutL/HexB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIH6"/>
    <dbReference type="STRING" id="3885.V7CIH6"/>
    <dbReference type="Gramene" id="ESW30007">
        <property type="protein sequence ID" value="ESW30007"/>
        <property type="gene ID" value="PHAVU_002G116900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1977">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHHAVEH"/>
    <dbReference type="OrthoDB" id="429932at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032300">
        <property type="term" value="C:mismatch repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16926">
        <property type="entry name" value="HATPase_MutL-MLH-PMS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.565.10:FF:000003">
        <property type="entry name" value="DNA mismatch repair endonuclease MutL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1370.100:FF:000007">
        <property type="entry name" value="MUTL protein homolog 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.20">
        <property type="entry name" value="MutL, C-terminal domain, dimerisation subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.100">
        <property type="entry name" value="MutL, C-terminal domain, regulatory subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014762">
        <property type="entry name" value="DNA_mismatch_repair_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014790">
        <property type="entry name" value="MutL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042120">
        <property type="entry name" value="MutL_C_dimsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042121">
        <property type="entry name" value="MutL_C_regsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037198">
        <property type="entry name" value="MutL_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073:SF47">
        <property type="entry name" value="DNA MISMATCH REPAIR PROTEIN MLH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08676">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00853">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118116">
        <property type="entry name" value="DNA mismatch repair protein MutL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00058">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MutL C-terminal dimerisation" evidence="4">
        <location>
            <begin position="987"/>
            <end position="1147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1225" mass="139111" checksum="A40FCB861DB98272" modified="2014-02-19" version="1">MMASIKPLPETVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSIGKCCLKVVDDGSGITRDGLELVGERYATSKFLNLVDLNVTSENFGFRGEALASISDVSVLEIVTRTHGRPNGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKCILSSPNKVLQSIKKCVMRLALVRPNISFKVVDIERFEHLKSWNTDNEFRNKKRSRCQTGPAYLLNLTCPRSMYDLAFEPSKTYVKFKDWTPILNFIEKVIKQFWEENIASVEPIIQAAYMVEDQQEKAYVNIISDESDISKFRNQNRKDCLDLFFSTSDKLIEGNYHQSNREDVRTSIGYMEAAMFKEKQSIGDSLFQTGYSGNLLDDDSHAKCISTVTRRPNGLLMRDSSSSLKGDNLFYDEIPAIESLNDCVPFHAPSSSHGRKFHKEADVNSETFQDDLHFNCNEYSYDVNINGDLQKSFLKGCSTLGSILHKKDFFVKNDGYEIQTDSFCSKRNTGEDCISGKDLNDVPFDEPSSSHGRKFHKGADVISESFQDDLHYNYDGYSYDVDINGDLQKPFIRGCSTLGSILPKKDLSVNDKYELQTDSFCSKKNTGEDYRSGKDLYVHPYPEVKKKLKMSKNSDFLERELAEENCLPSDLCYSASRIGSSESDDLSSNFECHPLYPKSSSQAHALGFYRTTDIKDDLGGESRCFKWVHHKKRLDERENEFNFSYNMSWNTNQHHSASSYANIGFNFDVAGDSGEIFNKRVDCPDFSDIYSTKRSDMLNKELDWLLPKSCFKSCKRPNKNKGKTDQFRNSILEGNHERSRRSISAPPFYRSKRRFFSLNHPSEIKAKRQIDRVYNPAFNHGEASNSKYHQQPPVAHHQSTKDLLLQEFKINVKQTSEVLGAMQVNDITEIEELESFNIQNSAPIGELCSKDVQDSIDFGTKWRNCSPNITKNDKPANIECRNNILDISSGFLHLAGDSLIPETISKKCLEDSKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEDLRQKVLSGEAKTVTYLHAELELVLPEIGYQLLHSYSEQIKDWGWICNIHAKNSESFRRNLDIIKRQQTTITLIAVPCILGVKLNDVDLLEFLQQLADTDGSSTMPPSVIRVLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNESSSDEWHGLHKHKVCVERVVQRLNPASGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIS1</accession>
    <name>V7CIS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Leucine-rich repeat-containing N-terminal plant-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G124300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIS1"/>
    <dbReference type="SMR" id="V7CIS1"/>
    <dbReference type="STRING" id="3885.V7CIS1"/>
    <dbReference type="Gramene" id="ESW30097">
        <property type="protein sequence ID" value="ESW30097"/>
        <property type="gene ID" value="PHAVU_002G124300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPYS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CINLIFI"/>
    <dbReference type="OrthoDB" id="1730338at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000041">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051809">
        <property type="entry name" value="Plant_receptor-like_S/T_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27008:SF523">
        <property type="entry name" value="LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27008">
        <property type="entry name" value="OS04G0122200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="10">
        <location>
            <begin position="101"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="2"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW30097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="502" mass="56015" checksum="9029EFD60D4F19D5" modified="2014-02-19" version="1">MQEEMEVELQRIKEKMQEEMEVKLKEQVEERKFELLNNIKSASTKSQSCIPRVMTQDLQEEVVIEFFSFDLLVNNDYYYKQKFENNYKDINVDSQSVERESISTDPYGILLSWNSSTHFCNWYGITCNPMLQRVTGLNLEGYKLKGSISPHIGNMRKFNLGDNSFYGKIPQELGRLSQLWNLSLANNSLVGEIPTNLTGCTNLRSLLLYGNNLVGKIHFQISCLRKLQKLSVFSNKLSGGVPSFVGNLSSLTHFSVSDNKLEGGIPQEICNLKSLTFLSLDLNRLTGTFPSCLYNMSSLSLISAPENQLNGSLSPNMFNTLPNLELLAIAMNQISGPIPPSITNASVLLVIDISENHFTGKVPTSLGKLQDLQYLSLYRNNLGDNSTNDLEFLNLLHLGGNKISREIPESLGNGLALLTMEHNRIIGTIPTTSGKFLNMQVLDLNANMLSGEIGPFIGNLSQLFHLDMGKNMLEGNVPPSIGNCQKLEHLDLSQNNLTLGDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL83</accession>
    <name>V7CL83_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G126300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL83"/>
    <dbReference type="Gramene" id="ESW30118">
        <property type="protein sequence ID" value="ESW30118"/>
        <property type="gene ID" value="PHAVU_002G126300g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013187">
        <property type="entry name" value="F-box-assoc_dom_typ3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050796">
        <property type="entry name" value="SCF_F-box_component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672">
        <property type="entry name" value="BNACNNG10540D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672:SF13">
        <property type="entry name" value="F-BOX PROTEIN CPR30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08268">
        <property type="entry name" value="FBA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="4"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="F-box associated beta-propeller type 3" evidence="2">
        <location>
            <begin position="46"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="235" mass="27494" checksum="8A3E8ADE0E69EF8E" modified="2014-02-19" version="1">MSMSLPIDLQLEIFSYLPCKAIVRFMVLSHLHHSLLISPDFICRHHNKSPNKLFVLLLPSITNLCEDDDHLTLFQNFFVHRNFGDNIIGICNGIICMQTYRDVFFINPMIRYCFDLPLHKDKSIYYSYGFISCGLSDYLVVKIDLDAKHYYYTDDDDDEGGYIPSPRKAWVYTYVKHDWRPLKIPDCSLCTPDTSLAYNGVVYYGLLHWGAKKWVENALYYFILTFDPQTEAFTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMH5</accession>
    <name>V7CMH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="9">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G235400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the PPP phosphatase family. PP-2A subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="9"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMH5"/>
    <dbReference type="SMR" id="V7CMH5"/>
    <dbReference type="STRING" id="3885.V7CMH5"/>
    <dbReference type="Gramene" id="ESW31397">
        <property type="protein sequence ID" value="ESW31397"/>
        <property type="gene ID" value="PHAVU_002G235400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0371">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGYNWGQ"/>
    <dbReference type="OrthoDB" id="1930084at2759"/>
    <dbReference type="PhylomeDB" id="V7CMH5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07415">
        <property type="entry name" value="MPP_PP2A_PP4_PP6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.21.10:FF:000003">
        <property type="entry name" value="Serine/threonine-protein phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047129">
        <property type="entry name" value="PPA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45619">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="10">
        <location>
            <begin position="116"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00034714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW31397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="311" mass="35612" checksum="F44775B28447E258" modified="2014-02-19" version="1">MDSVPSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGTANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNJ0</accession>
    <name>V7CNJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G184400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNJ0"/>
    <dbReference type="SMR" id="V7CNJ0"/>
    <dbReference type="STRING" id="3885.V7CNJ0"/>
    <dbReference type="Gramene" id="ESW30810">
        <property type="protein sequence ID" value="ESW30810"/>
        <property type="gene ID" value="PHAVU_002G184400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RDIMEIV"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="PhylomeDB" id="V7CNJ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000001">
        <property type="entry name" value="Protein SRG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="7">
        <location>
            <begin position="202"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW30810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="41026" checksum="B7742A25D6082B99" modified="2014-02-19" version="1">MDPTPTSLTVPFVQEIAKEALTSVPERYVRPLHERPILSTTTPLPQVPIIDLSKLFSPDLKETELQNLHCACKEWGFFQLINHGVSSSLVEKVKRGAHELFNLPIEEKKMFRQREGEGVEGYGQVFVVSEEQKLEWGDMFFMLTLPPRLRKPYLFPNIPLPFRDDLDSYCTELKNLAMKIIDLMENALSVETKEISELFGDGVQSMRLNYYPPCPQPELVMGLNPHSDGGGLTILLQANEMEGLQIKKDELWIPIKPLPNSFIINLGDMLEIMTNGIYRSIEHRATVNQEKERVSIATFYNPGMEANIGPAESLVTPKTPAVFRRIKVTEYYRGYLSRELRGRSYLDSIRIQNHDEKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQK4</accession>
    <name>V7CQK4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G318700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQK4"/>
    <dbReference type="SMR" id="V7CQK4"/>
    <dbReference type="STRING" id="3885.V7CQK4"/>
    <dbReference type="Gramene" id="ESW32394">
        <property type="protein sequence ID" value="ESW32394"/>
        <property type="gene ID" value="PHAVU_002G318700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPI3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHTDMAE"/>
    <dbReference type="OrthoDB" id="1430376at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046910">
        <property type="term" value="F:pectinesterase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000005">
        <property type="entry name" value="Pectin methylesterase inhibitor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051955">
        <property type="entry name" value="PME_Inhibitor"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080:SF64">
        <property type="entry name" value="PLANT INVERTASE_PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756041" description="Pectinesterase inhibitor domain-containing protein" evidence="3">
        <location>
            <begin position="28"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="4">
        <location>
            <begin position="40"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="22697" checksum="17F6BA58555F693E" modified="2014-02-19" version="1">MRTQRIHLLHLLLSLFLFAAAFSPVAAAAYDASAPAPDDGDTEFIRSSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAISVSLSKAHRAASYISNLTHDADYGTSGSRAALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCNRVTNVKKFTSNALALVNSYAGKGMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRD9</accession>
    <name>V7CRD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">U6 snRNA-associated Sm-like protein LSm5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">LSM5</name>
        <name evidence="12" type="ORF">PHAVU_001G007400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">LSm subunits form a heteromer with a doughnut shape.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the snRNP Sm proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRD9"/>
    <dbReference type="SMR" id="V7CRD9"/>
    <dbReference type="STRING" id="3885.V7CRD9"/>
    <dbReference type="Gramene" id="ESW32667">
        <property type="protein sequence ID" value="ESW32667"/>
        <property type="gene ID" value="PHAVU_001G007400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32668">
        <property type="protein sequence ID" value="ESW32668"/>
        <property type="gene ID" value="PHAVU_001G007400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32669">
        <property type="protein sequence ID" value="ESW32669"/>
        <property type="gene ID" value="PHAVU_001G007400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1775">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YETTPQG"/>
    <dbReference type="OrthoDB" id="429711at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990726">
        <property type="term" value="C:Lsm1-7-Pat1 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046540">
        <property type="term" value="C:U4/U6 x U5 tri-snRNP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005688">
        <property type="term" value="C:U6 snRNP"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01732">
        <property type="entry name" value="LSm5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.100:FF:000003">
        <property type="entry name" value="U6 snRNA-associated Sm-like protein LSm5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033871">
        <property type="entry name" value="LSm5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047575">
        <property type="entry name" value="Sm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001163">
        <property type="entry name" value="Sm_dom_euk/arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20971">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20971:SF0">
        <property type="entry name" value="U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01423">
        <property type="entry name" value="LSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00651">
        <property type="entry name" value="Sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52002">
        <property type="entry name" value="SM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0007">Acetylation</keyword>
    <keyword evidence="3 10" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="7 10" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="8 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 10" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 10" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Sm" evidence="11">
        <location>
            <begin position="9"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS52002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW32669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="87" mass="9617" checksum="33A939011DB84AA0" modified="2014-02-19" version="1">MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPETE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRP3</accession>
    <name>V7CRP3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G023100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRP3"/>
    <dbReference type="SMR" id="V7CRP3"/>
    <dbReference type="STRING" id="3885.V7CRP3"/>
    <dbReference type="Gramene" id="ESW32857">
        <property type="protein sequence ID" value="ESW32857"/>
        <property type="gene ID" value="PHAVU_001G023100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1100">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHFQQHY"/>
    <dbReference type="OrthoDB" id="1711136at2759"/>
    <dbReference type="PhylomeDB" id="V7CRP3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004842">
        <property type="term" value="F:ubiquitin-protein transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16649">
        <property type="entry name" value="mRING-HC-C3HC5_CGRF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000239">
        <property type="entry name" value="probable BOI-related E3 ubiquitin-protein ligase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42647:SF10">
        <property type="entry name" value="F2G19.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42647">
        <property type="entry name" value="SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13920">
        <property type="entry name" value="zf-C3HC4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036836">
        <property type="entry name" value="RNase_bind_SBP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="293"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="188"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="339" mass="38703" checksum="599C351C118CC192" modified="2014-02-19" version="1">MAFPQHHFQRHYQTQQQQPQTKPFRNLQAIDGQMPQQVAFYNPSDLQDQSQHPPYIPPFHVVGFAPGPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDVEIDRFLKVQGERLRQSILEKVQATQLQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRTLDFHLLSKENTDMKDMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFISMEVYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSZ8</accession>
    <name>V7CSZ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ADF-H domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G288100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the actin-binding proteins ADF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSZ8"/>
    <dbReference type="STRING" id="3885.V7CSZ8"/>
    <dbReference type="Gramene" id="ESW32041">
        <property type="protein sequence ID" value="ESW32041"/>
        <property type="gene ID" value="PHAVU_002G288100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1735">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LKLCMLY"/>
    <dbReference type="OrthoDB" id="10249245at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015629">
        <property type="term" value="C:actin cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003779">
        <property type="term" value="F:actin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030042">
        <property type="term" value="P:actin filament depolymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11286">
        <property type="entry name" value="ADF_cofilin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000025">
        <property type="entry name" value="Actin-depolymerizing factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002108">
        <property type="entry name" value="ADF-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017904">
        <property type="entry name" value="ADF/Cofilin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11913">
        <property type="entry name" value="COFILIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00241">
        <property type="entry name" value="Cofilin_ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00102">
        <property type="entry name" value="ADF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51263">
        <property type="entry name" value="ADF_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755751" description="ADF-H domain-containing protein" evidence="3">
        <location>
            <begin position="20"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="ADF-H" evidence="4">
        <location>
            <begin position="51"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="183" mass="20896" checksum="378814D5960353C2" modified="2014-02-19" version="1" fragment="single">SLFLCSLFSLHTILIHSIALIFQSPLLPSLSFHSHFTGRFFLIAGKMANAASGMAVHDDCKLKFQELKSKRSYRFIVFKIEEQQVVVEKLGDPSSSYEDFMASFPANECRYAVYDFNFTTNENCQKSKIFFVAWSPDTSKVRMKMVYASSKDRFKRELDGIQVDMQATDPSEMSLDLVKARAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT38</accession>
    <name>V7CT38_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G322400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT38"/>
    <dbReference type="SMR" id="V7CT38"/>
    <dbReference type="STRING" id="3885.V7CT38"/>
    <dbReference type="Gramene" id="ESW32435">
        <property type="protein sequence ID" value="ESW32435"/>
        <property type="gene ID" value="PHAVU_002G322400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1651">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QCGLTKQ"/>
    <dbReference type="OrthoDB" id="446890at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000025">
        <property type="entry name" value="Glutathione peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029759">
        <property type="entry name" value="GPX_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029760">
        <property type="entry name" value="GPX_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592:SF78">
        <property type="entry name" value="GLUTATHIONE PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00460">
        <property type="entry name" value="GLUTATHIONE_PEROXID_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00763">
        <property type="entry name" value="GLUTATHIONE_PEROXID_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756493" description="Glutathione peroxidase" evidence="6">
        <location>
            <begin position="26"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="7">
        <location>
            <begin position="35"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="198" mass="22541" checksum="1EA5B7DC375A75E7" modified="2014-02-19" version="1">MNLLTFWNCISILFLLLAFFIYSHTYPSTPSLMAEESSKSIYDFTVKDIRGNDVSLNDFTGKVILIVNVASQCGLTQTNYKELNVLYDKYKNQGFEILAFPCNQFAGQEPGNNEEIQDVVCTRFKAEFPIFDKVEVNGKNAAPLYKFLKEQKGGIFGDGIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIEKLLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTD0</accession>
    <name>V7CTD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BRCT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G070600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTD0"/>
    <dbReference type="SMR" id="V7CTD0"/>
    <dbReference type="STRING" id="3885.V7CTD0"/>
    <dbReference type="Gramene" id="ESW33452">
        <property type="protein sequence ID" value="ESW33452"/>
        <property type="gene ID" value="PHAVU_001G070600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1929">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="251770at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033314">
        <property type="term" value="P:mitotic DNA replication checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007095">
        <property type="term" value="P:mitotic G2 DNA damage checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00027">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17731">
        <property type="entry name" value="BRCT_TopBP1_rpt2_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10190:FF:000010">
        <property type="entry name" value="DNA topoisomerase II binding protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10190:FF:000052">
        <property type="entry name" value="Transcription coactivator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10190:FF:000057">
        <property type="entry name" value="Transcription coactivator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10190:FF:000061">
        <property type="entry name" value="Transcription coactivator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059215">
        <property type="entry name" value="BRCT2_TopBP1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13561">
        <property type="entry name" value="DNA REPLICATION REGULATOR DPB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13561:SF20">
        <property type="entry name" value="DNA TOPOISOMERASE 2-BINDING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12738">
        <property type="entry name" value="PTCB-BRCT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="BRCT domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="100"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="182"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="368"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="558"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="domain" description="BRCT" evidence="3">
        <location>
            <begin position="659"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="905"/>
            <end position="942"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="916"/>
            <end position="931"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="969" mass="108165" checksum="0114A95116AF7937" modified="2014-02-19" version="1">MLKTKAFQGAHVFMSRNLVPPEVFDALHDAVKDNGAELHLCCDPSRNGPNDYHIIASRKHEKFDHLKSKGCKLLGPRCVLSCAKGGRSLPKQGFTCCLAMDGVKILASGFDTEEKVKIDELVAEMGGVLHTKTSLDLNFVLVKNVLAAKYKWALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIPADVRKEMEKLILQNGGKYSAELTKNCTHLISEAPQGDKYKVAKRWGHIHIVISKWFDQSIARRACLNEEFFPVLHGSVSSHKVTRDLTMQHCQEKDIGKLQSAASSGATDSNVQVSCSEFVERDQEAMPSEYMSSVSCRFAKEADAEPPLQASGDLNFDGVVADDSESDDNDLYLSECRILLVGFEALEMRKLVNIVRKGGGSRYMCFNDKLTHIVVGNPTEMEKKDVRSLAALGVIYVVKTTWLEDCDHKKIEVPVLRRHIAYDLLHPKASLVKGTVTGSTSMDHSKSSSCHQSSHQVDFKIVQPESLEKRKEEIQDMDINGYSFRKANCRTMLQNQLPDSKLSTQRMSRPDFSVHYEKSTNVFRGKLFCFSNLFPEEKRGEIVQWISQGGGEVISGKTKQIVHYTVECHGVTPMLTGDSTSLYISSHWIRSCLEAGSLLDVDTHILYSPLPCHVPLPGFERFRFCVSQYEEKDRNLLRNLCFVLGAKFGEKLTKKVTHLLCKFTNGPKYDGACKWGIQSVTSEWIFECIKQNGVVATDRFLPKEVTAQDREAGICTGSQFPTQAAQMISDMPSQLSSQSQILRGITNKNVGCGVDNHEANFKKPSVYSKKARLVEEPCLSTKMPFASNSGIHAYEKNFSEDNMIIDAGEVCPTVPDVASAIEDLLEQTSKMHGQRSPAQTGCQRGIYPSNLSVLGEDNSNPHTVFGLSKHWSNRSGRKDDNGEASEDRRAGIYDGFSETQTESQVVSYEEDLSGRQRLIDIIRTRSGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU73</accession>
    <name>V7CU73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">B box-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G324100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU73"/>
    <dbReference type="STRING" id="3885.V7CU73"/>
    <dbReference type="Gramene" id="ESW32456">
        <property type="protein sequence ID" value="ESW32456"/>
        <property type="gene ID" value="PHAVU_002G324100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYRT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGYCDYH"/>
    <dbReference type="OrthoDB" id="724537at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006734">
        <property type="entry name" value="PLATZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31065">
        <property type="entry name" value="PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31065:SF41">
        <property type="entry name" value="PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04640">
        <property type="entry name" value="PLATZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00336">
        <property type="entry name" value="BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="3">
        <location>
            <begin position="22"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="102"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="117"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="226" mass="26162" checksum="BE771BA1D1824972" modified="2014-02-19" version="1">MGGENLSPKEKSRDWVGVLMNSSFGYCDYHHDLRSNEKNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSINKSKSSDLSPDSKSKEPSIRPKSGGKCEECGKHLQDERNRFCSITCKIAVLPVETENQSARGMITPKSEGIDFTMNDNHNSEPESSISEVEPYGWVEVVNFRKRPRKSTPQRPVFVFTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV65</accession>
    <name>V7CV65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Arf-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G056000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV65"/>
    <dbReference type="SMR" id="V7CV65"/>
    <dbReference type="STRING" id="3885.V7CV65"/>
    <dbReference type="Gramene" id="ESW33263">
        <property type="protein sequence ID" value="ESW33263"/>
        <property type="gene ID" value="PHAVU_001G056000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0702">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGMQYHP"/>
    <dbReference type="OrthoDB" id="6036at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08838">
        <property type="entry name" value="ArfGap_AGFG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044820">
        <property type="entry name" value="AGD14-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46085">
        <property type="entry name" value="ARFGAP/RECO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46085:SF16">
        <property type="entry name" value="ARFGAP_RECO-LIKE ZINC FINGER DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Arf-GAP" evidence="3">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="97"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="199"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="596"/>
            <end position="644"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="199"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="318"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="392"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="437"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="603"/>
            <end position="644"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="644" mass="70598" checksum="B6A2713CB8E90EDE" modified="2014-02-19" version="1">MNQGPQYVCTTFSTFICTNCSGIHREFTHRVKSVSMAKFSPEEVTALQAGGNERAKQIYFKQLDPLLHSNPDSSNIPKLREFIKHVYVERRYTGESSSSSLSRLRSSEKESNATKRSSSFRLELRTPHSSPGPTPRSDDKNLRYLYDESRSPRYAQRYSRNGGQIRSPIKIEVVDDRYRDEERRNRRLSNIEAKLKKTSIDDKKNVESSQHHVAPPLAEVSREKVQPLQIKPPGGKSSVEQKPSEQKNNNPETPPPTTQSNESNWAIFEVPTEKDDPKTPNKNTSTPSTEKAASEPAPPPAKNPIDLLLSELSGPVTPVTSGMPQVPSSVNDDPTTTTVQNAITWDFPPPSTGKTTASSNNTSVWPSPSTPATEPAQLSIEAPPHTELSRAHNPSNMQYLPSVSVGFSSTTQPTNSPVKDVASSNKPSVAPSEKDSSWSFTELPSPTTSKPIQETISDVGSQPSKVETRASGRQELPEDLFASSYLSGRAPLPNWQNVQPQGMGYGMQYYHNAVPPTTLSNSSMSTNPFDVTDARSLIHVSSVPSMASVHCAPQAVLSPRTALMHTSSLGSLVSQSPSYTSPVTGMYFDQVDNEKQPTRLQRVESSNGEITSFGSIDPIQQSNRGFMTSKSSISFSNTKGNPFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXH3</accession>
    <name>V7CXH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="27" type="ORF">PHAVU_001G083300g</name>
    </gene>
    <organism evidence="27 28">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="28" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="28">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="22">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RLP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXH3"/>
    <dbReference type="SMR" id="V7CXH3"/>
    <dbReference type="Gramene" id="ESW33596">
        <property type="protein sequence ID" value="ESW33596"/>
        <property type="gene ID" value="PHAVU_001G083300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSHG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDFSWNS"/>
    <dbReference type="OrthoDB" id="1896041at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048508">
        <property type="term" value="P:embryonic meristem development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009942">
        <property type="term" value="P:longitudinal axis specification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009945">
        <property type="term" value="P:radial axis specification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009409">
        <property type="term" value="P:response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000275">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000041">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000192">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000260">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000369">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050647">
        <property type="entry name" value="Plant_LRR-RLKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056:SF63">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16 23" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="20" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="15" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="18 24" id="KW-0472">Membrane</keyword>
    <keyword evidence="14 23" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-0675">Receptor</keyword>
    <keyword evidence="28" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="12 25" id="KW-0732">Signal</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="11 24" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="17 24" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="25">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756635" description="non-specific serine/threonine protein kinase" evidence="25">
        <location>
            <begin position="21"/>
            <end position="1055"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="717"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="26">
        <location>
            <begin position="779"/>
            <end position="1053"/>
        </location>
    </feature>
    <feature type="binding site" evidence="23">
        <location>
            <position position="807"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="EMBL" id="ESW33596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1055" mass="115054" checksum="46F37768AEA34D7A" modified="2014-02-19" version="1">MDLLFLLQCLLFFTSHHANALNASISRDALSLLSFKSFVSSDPSNFLAGWNNRTSSNLCRWHSVACGGAGSLSGRVTSLSVTGLGGGQLSPSVGDLSELRVLSLAGNMFSGEIPSTVGNLRFLEVLELQGNNFSGRVPTQMSFAFLQSLKLINISGNAFSGSIPSEIIGSGSVKIVDLSNNQFSGVIPLNGTCDSLKHLKLSRNFLTGEIPPQIGKCRNLRTLLVDGNILEGRIPSEIGHIVELRVLDVSRNSLTGRVPKELANCGKLSVLVLTDLFEDRDEGGLEDGFRGEFNAFVGNIPPQVFLLSSLRVLWAPRANLGGRLPGGWSDSCSLRVLNLVQNYVTGVLPESLGMCRNLSFLDLSSNNLVGYLPSLQLHVPCMVYFNVSRNNISGTLKGFRKKSCGLSALDPSFLELDGFSDDAYFNFPVWRFQKNAFIGSGFEENNTIVVSHDFSWNSFVGSLPLFSLGDSLFSANRKVSYALSLNNNRFNGILPDQLVSNCNDLKTLSVNLSVNQLSGGNFQKSVLECLKLTDFEAAYNQIDGSIGPGIGDLVMLQHLDLSGNKLSGSLPNQLGNLQNMKWMHLGGNNLTGEIPSQLGKLTSLAVLNLSHNALVGTIPGSLSNAKSFEILLVDHNKLSGEIPLTFSTLSNLMQLDVSFNNLSGHIPRLQHPSDCDSYKGNAHLHPCPDPYSDSPASLPVPLEIQHHTQRGRKLRTLVIVVVTSASVVLCTLLGIVFVIFSGRSKFGRLSSIRRRQVVTFEDVPTELSYDSVATATGNFSIRHLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDSSGKNVQWPVIYKIAKDIAEALAFLHYSCVPRIVHRDIKPSNILLDEDHNAYLSDFGLARLLEVTETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAELLMTEGRCSELFSSTLWEAGPKEKLLGLLKLALTCTEETLSIRPSMKLVLEKLKYLKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXI0</accession>
    <name>V7CXI0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G189500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXI0"/>
    <dbReference type="STRING" id="3885.V7CXI0"/>
    <dbReference type="Gramene" id="ESW34887">
        <property type="protein sequence ID" value="ESW34887"/>
        <property type="gene ID" value="PHAVU_001G189500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUB6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHMISKA"/>
    <dbReference type="OrthoDB" id="1891924at2759"/>
    <dbReference type="PhylomeDB" id="V7CXI0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31639">
        <property type="entry name" value="F-BOX PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31639:SF256">
        <property type="entry name" value="OS07G0242900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="4"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="419" mass="47741" checksum="1A0DEFE863379DAA" modified="2014-02-19" version="1">MDHLPVEVIGNILSLLGSARDVVVASATCKKWREAWRSHLHSLSFNYCDWPLYHEYTSPRLEILITQTIFQTKALQFLTIFMDDDHEFSAAPVIAWLMYTRDSLRQLHYNVRTNPSFNIIEKCSRHRLEVLALARNSIVGVEPGYLKFPCLKSLSLSFVSISALDLSLLLSSCPKLETLAMVSPEIAISDSQASVELISVSLKNFHLELFSSDKFILDVDLLETLHLKDCTFEIFELVGKGTLKALKIDDVSVIHLDIGDGTENLEIIDVCNFTIMWPKFYHVISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLRHLSLSYDLRDGVLHYGLQGLSCLKNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVVYGYVSEVKTHEECQILARFSEFILQLGRKYGQVKFEFEYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYJ5</accession>
    <name>V7CYJ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G211900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYJ5"/>
    <dbReference type="SMR" id="V7CYJ5"/>
    <dbReference type="STRING" id="3885.V7CYJ5"/>
    <dbReference type="Gramene" id="ESW35159">
        <property type="protein sequence ID" value="ESW35159"/>
        <property type="gene ID" value="PHAVU_001G211900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU4P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCYEENK"/>
    <dbReference type="OrthoDB" id="438440at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008970">
        <property type="term" value="F:phospholipase A1 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043367">
        <property type="entry name" value="PLIP1/2/3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46483">
        <property type="entry name" value="PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46483:SF4">
        <property type="entry name" value="PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="685"/>
            <end position="707"/>
        </location>
    </feature>
    <feature type="domain" description="Fungal lipase-type" evidence="3">
        <location>
            <begin position="355"/>
            <end position="491"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="708" mass="78193" checksum="31D7F0E71A32BE8A" modified="2014-02-19" version="1">MDALCLHSSICKIAPSTIPITATARANDYASQSQVSTVGRSLFSRFSFRYPLTSLWPQQLTGNASGYNGLAVDDAVLAENETKEGEGQNGNSVFKIFHARSVWSVEQRNDEAKVVINDLTDEEEEEEEECGGCRVDYDEDEEEDNEEENEEVLFDRDSFSRMLRRVSLPEARLYARISHLGNLAYSIPKIKPGILLKNHGLRFVTSSIEKKKLAVAAEKNQTSAAIPKEEANEKDVGETKEKKNGGRMICACTAYEIAASAASYLRTQTKSILPFTSSNAVEGEGSHEASNKSFNGDKMTKTEEAALKATTDSVTAVVAANEDVKQAFADHLSSTTSSPCEWFVCDDDKTATRYFVIQGSETFASWKANLLFEPVKFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATCRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPTHIAELLKAVNGNFRSHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGHLSESSDTLKQIRAAQMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKCVRTVIRQELSQIRKARREQRLKVWWPLVLPCGSGSGAVVGGSMISVNVIHDHLSFFGIIHTGSESLKRFSRLVASQHMQWFVVLLFPARLLLVGCNLISLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZB4</accession>
    <name>V7CZB4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G135900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZB4"/>
    <dbReference type="SMR" id="V7CZB4"/>
    <dbReference type="STRING" id="3885.V7CZB4"/>
    <dbReference type="Gramene" id="ESW34236">
        <property type="protein sequence ID" value="ESW34236"/>
        <property type="gene ID" value="PHAVU_001G135900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPPS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYCLMSK"/>
    <dbReference type="OrthoDB" id="79603at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37743">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37743:SF1">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW34236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1102" mass="123594" checksum="5193E7A513B7FF81" modified="2014-02-19" version="1">MEGEEELLWKSEPQRESIVSVTLARAITSLLTSRPKKLHDSISRLSSHSSRSHTSLASLEDSLWFFHTYVADAATNNSSLDQLLLPIIDSVLKSKHGDQGMLLLNWLFQDEHLFQPVAQALAGVVARKHVHDRYLLLGWCLLLRNLVEFETSAHQSMFGGIRERYGDLLKILSTCLPDLASIVSKGSTLQDGFELPSRLGVSAADCFLSLSGALTKVADSKKSKLDARAKDQAITFVQSPTTDQKEKLDSKFLMSMIERDYTLWHHLDDIICLVGRLLSWSKKSRFLHAKGLEQVLKWLEEIKDHHGSFQHGAALETDSNALKTGDLLLSSCWKHYSVLLHLEDKKFSQHYKKLLDQYMSGIQYYMDNHTGGGYTDNNDGGLETRKFFLNCLCLLLGRLDIKRFESTVSEFGMNISRILVPQLNCTDEDVIAGVVSIFKAIILRPDYSQEDALTDSRKENSVIPFLLHLLDERDGTARAVVMLIGEYCSMSKDDQCLMEVLKRLDSGNISQRRNAMDVISEVLHISSNSQSLMSCSARKDIANKLLERLGDEEIMIREQASKLLPMIDPSLYLPALVGLVYSSDETKSIASDSIIEVLKHHNQRIEVIFLFLDCLSNTSISLDLPQSNGDKGSKFDTDRLLKLVPVWSKSVQDWNLLIGPLVDKMFADPSNATTVKFLSYISENLANVADLVLHHVLLHVREQKQIDESFLSRWEQRTYSSDEFEEMQQSLFEHLCPLLIIKILPLKTFNDLNSSIMYGHLSKNIIPDAASRNTDIDCDCISAFLLNRAFSEFEFEDVRKLSAELCGRIHPQVLLPFLCSLLERAVASKNILKIKACLFSICTSLVVRGWESLYHCSMYAIREMIETVLLWPCLNADSVSKAQHGCIDCLALMICAELQAKESITTSMPDKTKAVGKEGKSVVSYVLNQFFNNKNERTSTPEFGDENSEFVAAAVSLSFRLCMGNVLISTCQKISESCKKPFAAQVLPFLLHSLEFETMSEIRAACTQVLFSAVYHLRSAVLPYASDLLRSALKALRKESDKERIAGAKLIASLMASEDVILENIFVGLLEARSVLSTISSSDPSLELQQLCRNLLACISSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZH5</accession>
    <name>V7CZH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MENTAL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G242400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZH5"/>
    <dbReference type="STRING" id="3885.V7CZH5"/>
    <dbReference type="Gramene" id="ESW35529">
        <property type="protein sequence ID" value="ESW35529"/>
        <property type="gene ID" value="PHAVU_001G242400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1454">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSHFHNY"/>
    <dbReference type="OrthoDB" id="1914191at2759"/>
    <dbReference type="PhylomeDB" id="V7CZH5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019498">
        <property type="entry name" value="MENTAL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34953">
        <property type="entry name" value="ALPHA/BETA HYDROLASE RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34953:SF1">
        <property type="entry name" value="ALPHA_BETA HYDROLASE RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10457">
        <property type="entry name" value="MENTAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="MENTAL" evidence="2">
        <location>
            <begin position="73"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="24188" checksum="A4FB0143CCCFA9C9" modified="2014-02-19" version="1">MSGKHYQITGSTMGFSSKEDKSKRIMRGFKTLFFLITMVISLLLFSAPVLLVIADALLPSALLSTISPSSFSLENLASHFHHYDFRSSLIDIPLISIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLSLMFVSLKAVYIFSVWGLDRSGHVGGTEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYLKILQEERIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZL8</accession>
    <name>V7CZL8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">glutathione transferase</fullName>
            <ecNumber evidence="1">2.5.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G173500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>RX + glutathione = an S-substituted glutathione + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:17792"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="EC" id="2.5.1.18"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the GST superfamily. Lambda family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.18" evidence="1"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZL8"/>
    <dbReference type="SMR" id="V7CZL8"/>
    <dbReference type="STRING" id="3885.V7CZL8"/>
    <dbReference type="Gramene" id="ESW34700">
        <property type="protein sequence ID" value="ESW34700"/>
        <property type="gene ID" value="PHAVU_001G173500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0406">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPLAHRA"/>
    <dbReference type="OrthoDB" id="4951845at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009636">
        <property type="term" value="P:response to toxic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03203">
        <property type="entry name" value="GST_C_Lambda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000091">
        <property type="entry name" value="Glutathione S-transferase L2, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1050.10:FF:000041">
        <property type="entry name" value="Lambda class glutathione S-transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044629">
        <property type="entry name" value="GSTL1/2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44328:SF17">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44328">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13410">
        <property type="entry name" value="GST_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00358">
        <property type="entry name" value="Main_(cytGST)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="GST C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0216">Detoxification</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="5">
        <location>
            <begin position="26"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="6">
        <location>
            <begin position="100"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00047960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00060732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW34700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="237" mass="27232" checksum="09FE3A1162A53AD2" modified="2014-02-19" version="1">MATAGVQEARIPPLTSTSEIPPLFDGTTRLYISYLCPYAQRVWITRNYKGLQDKIELVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYIDDNFEGQSLVPSDPAKKEFGEQLISYVDTFTKELYSALKGDPIQQASPAFDYLENSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVFFEVFKHDITEGRPKLAAWIEEVNKINAYTQTRGDPKDIVDLFKKRFLAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7D044</accession>
    <name>V7D044_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G259900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D044"/>
    <dbReference type="SMR" id="V7D044"/>
    <dbReference type="STRING" id="3885.V7D044"/>
    <dbReference type="Gramene" id="ESW35729">
        <property type="protein sequence ID" value="ESW35729"/>
        <property type="gene ID" value="PHAVU_001G259900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUH7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPANNSH"/>
    <dbReference type="OrthoDB" id="1897957at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021924">
        <property type="entry name" value="DUF3537"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31963">
        <property type="entry name" value="RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31963:SF2">
        <property type="entry name" value="ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12056">
        <property type="entry name" value="DUF3537"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="90"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="209"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="286"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="321"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="438"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="47"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="460" mass="51715" checksum="71A5FF02C9DD5664" modified="2014-02-19" version="1">MVFLFPHKTENLHMMPFFGSLDFVKKVMAMQRAEHLPIHTNTPFLTSNSNQSHQHQPQESNFNDEETPLDDILARLEALLTILGFNQSSLLSFTVSWTAFVAVGVAVPLVALQVYDTDKNQIKGFEIGIVAFQSCLAAVSLICLSRNLRKYGLTRFLFVDRHVAQMPCFHHDYVKQISGSLRLIILWVLSCFLLKTAREITRLSLVEEGSLWLSFAVLMALIVSWTCVTAISFSACVLFHLVCSLQLIHFDDYGKLLQRENDVLVFMEEHIRLRYHLSKISHRFRIFLLLQFLVVTASQFVTLLQVTGYGGALTFISGGDFAVSTLVQVVGIIICLHAATKISHRAQGIVSLASRWHAFVTCTSDASELRYCAGTGSLEAAKHLNSMFLDYSESNLESSNTQVASYMSSHHKRQAFVMYLQTNGGGISIFGWTVDRSLVNTIFFFELTLVTFVLSRTILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0A5</accession>
    <name>V7D0A5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Tyrosine decarboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G165600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 6 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the group II decarboxylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0A5"/>
    <dbReference type="SMR" id="V7D0A5"/>
    <dbReference type="STRING" id="3885.V7D0A5"/>
    <dbReference type="Gramene" id="ESW34601">
        <property type="protein sequence ID" value="ESW34601"/>
        <property type="gene ID" value="PHAVU_001G165600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0628">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NPGFNWS"/>
    <dbReference type="OrthoDB" id="639767at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036469">
        <property type="term" value="F:L-tryptophan decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990055">
        <property type="term" value="F:phenylacetaldehyde synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006559">
        <property type="term" value="P:L-phenylalanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009611">
        <property type="term" value="P:response to wounding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006587">
        <property type="term" value="P:serotonin biosynthetic process from tryptophan"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd06450">
        <property type="entry name" value="DOPA_deC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1340.10:FF:000001">
        <property type="entry name" value="Histidine decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000025">
        <property type="entry name" value="Histidine decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1340.10">
        <property type="entry name" value="dopa decarboxylase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010977">
        <property type="entry name" value="Aromatic_deC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002129">
        <property type="entry name" value="PyrdxlP-dep_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021115">
        <property type="entry name" value="Pyridoxal-P_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11999">
        <property type="entry name" value="GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11999:SF70">
        <property type="entry name" value="MIP05841P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00282">
        <property type="entry name" value="Pyridoxal_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00800">
        <property type="entry name" value="YHDCRBOXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00392">
        <property type="entry name" value="DDC_GAD_HDC_YDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="5 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 6 7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="6">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR602129-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW34601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="488" mass="54300" checksum="80A3488B04653402" modified="2014-02-19" version="1">MEESALRAMDAEQLREHGHKMVDFIADYYKTIQNFPVLSQVQPGYLEKLLPDSAPDYPDSLQNVLDDVTEKILPGVTHWQSPNYFAYYPANSSIAGFLGEMLSAGLNIVGFSWITSPAATELESIVLDWLAKAFQLPEDFYSSGKGGGVIQGTASEAVLVVLLAARDKILRRLGRSALPKLVMYASDQTHAALQKACQIAGLNPELCKFLKADSSTNYALSPEVLSEAISNDIAGGLVPFFLCATVGTTSSAAIDPLPALGKIAKTNNLWFHVDAAYAGSACICPEYRDYFDGIEESDSFNMNAHKWFLTNFDCSVLWVKDRNSLIQSLSTNPEYLKNKASQGNMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLEGLRSHIRNHIELAAYFEELVSQDKRFKVISPLSFSLVCFRLLSPLNSEDHGNKLNRDLLDSVNSTGNIFITHTVLSGEYILRFAVGAPLTERRHVTMAWQIFQDKATALLESL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1C1</accession>
    <name>V7D1C1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mal d 1-associated protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G197500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1C1"/>
    <dbReference type="STRING" id="3885.V7D1C1"/>
    <dbReference type="Gramene" id="ESW34991">
        <property type="protein sequence ID" value="ESW34991"/>
        <property type="gene ID" value="PHAVU_001G197500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1I5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMRNGFF"/>
    <dbReference type="OrthoDB" id="1914474at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053346">
        <property type="entry name" value="Fra_a_1-associated"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35722">
        <property type="entry name" value="MAL D 1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35722:SF1">
        <property type="entry name" value="MAL D 1-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="20577" checksum="53DCEDAB2CC5682E" modified="2014-02-19" version="1">MGWVWRDDNSDDLRRDNSSEGCSTTKVVKSQCRTEEVESGKFIRKCEKTEELLRNCIGKPVEVLQSNKEYTEEDITDEVLKGRSVPYSSSDRGMFDFPGLRNDMEVMERNLFGGLSRFLESAEEMTNDFFDAFGKSPRIFDAESSSPSVRRGIPNARRPEASKTQEKESGDTDYVSLAQDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1C5</accession>
    <name>V7D1C5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G225800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1C5"/>
    <dbReference type="STRING" id="3885.V7D1C5"/>
    <dbReference type="Gramene" id="ESW35325">
        <property type="protein sequence ID" value="ESW35325"/>
        <property type="gene ID" value="PHAVU_001G225800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUNH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGMEECS"/>
    <dbReference type="OrthoDB" id="765769at2759"/>
    <dbReference type="PhylomeDB" id="V7D1C5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032795">
        <property type="entry name" value="DUF3741-assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21726:SF59">
        <property type="entry name" value="DUF4378 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21726">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14383">
        <property type="entry name" value="VARLMGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3741" evidence="3">
        <location>
            <begin position="77"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4378" evidence="2">
        <location>
            <begin position="751"/>
            <end position="903"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="335"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="579"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="625"/>
            <end position="656"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="702"/>
            <end position="732"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="341"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="633"/>
            <end position="647"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="702"/>
            <end position="712"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="721"/>
            <end position="732"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="911" mass="100289" checksum="9843F882601375EE" modified="2014-02-19" version="1">MEMEKRRSKGSFLSLFDWNSKSRKKLVWSDPDISKQGKENVENLQKSQLTRIKVDEIGASPSNSQSCDFESTLSICSDEGCGSKAPGLVARLMGLDSLPASAVTEPSCTSFYGSTSHGVSHCNEGAVHSVNEFFPADYINTLLKLEKSQLGAMDSRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGILPSKSAAHVMEAAAKIIEASPQRYLRNRTASTRPSSVPLRILNLKERLEAAQYTSVSGKPVNMSKTYPANGKLSERSSNLSKCTSAFKGSRGSEKNSSCHLASKGKPVSLAIQARNNAHSRDTLISNGDMKCMRQKEKNEMKSNQHLRSQKPSTQKAMQQRPCSSRNDNVLGQNNQKQNSMTAKCKSTSKIDSNKPTTRAPSSETFGIMKTTNKGAKTAKIQPKRSSTRATDIEKEFQRSKAVSTSRKTKYISSDVHEARGPDNAVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPELSSATEHVIGTRNRIDVNSLGHSDSFYPKKLSLSPQGKHMIDSDALSVLLDKKLQELTSRINLPQCTLAAEGSSSGLGSSVQDKVPSAASTMPKEQDRSLFPDLFSDKLDSILDSRSSDDPVLSMNQQLQTSEANQDPSCSSNSESGNGSVCWGSTSVAGFETLVSESYLDSEDSAYASTIYSSMQDEEVSSFSQISESVSLESEVKGPEKSPSTSGDGNMTVKQMSGISNSVDFKRSSNTELEYVQDILGNAEFMAEEFAMGQTSTVIMPNLFDQLENQNSITENYGEEYCKLERKAIFDFVSEFLELRCKQAFIGTCKVWPGWMMSVQRKSWMAEELYKEMLSFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1Q5</accession>
    <name>V7D1Q5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 17">Pectinesterase</fullName>
            <ecNumber evidence="5 17">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_001G209100g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Acts in the modification of cell walls via demethylesterification of cell wall pectin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 17">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n methanol + n H(+)</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 17">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the pectinesterase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="5 17"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1Q5"/>
    <dbReference type="SMR" id="V7D1Q5"/>
    <dbReference type="STRING" id="3885.V7D1Q5"/>
    <dbReference type="Gramene" id="ESW35126">
        <property type="protein sequence ID" value="ESW35126"/>
        <property type="gene ID" value="PHAVU_001G209100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUB9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TPDPKFC"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000004">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000001">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31707">
        <property type="entry name" value="PECTINESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 17" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="13" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 17" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0964">Secreted</keyword>
    <keyword evidence="8 17" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149128" description="Pectinesterase" evidence="17">
        <location>
            <begin position="27"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="18">
        <location>
            <begin position="33"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="active site" evidence="16">
        <location>
            <position position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00057335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU000589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW35126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="61495" checksum="83435A5A50A979C5" modified="2014-02-19" version="1">MASKLSYSLSIFLFLLPLFHSIIVSADTVSNPATPVAPGTACQSTPDPSYCKSVLPPQKGNVYDYGRYSVKKSLSQARKFLSLVDKYLLRRSSLSAAAIRALEDCRTLGELNFDFLSSSFQTVNKTTRFLPSFQAEDIQTLLSAILTNQQTCLDGLKDTASAWSVRSGLTLPLSNDTKLYSVSLALFTKGWVPRTKVNTMHPTKKQQGFQNGRLPLKMSSRTRAIYESVSRRKLLEASVGEDVVVRDIVTVSQDGSGNFTTITDAIAAAPNKSASTDGYFLIYVTAGLYEENVSIDKKKTYLMMVGDGINKTVITGNRSVVDGWTTFSSATLVVVGQGFVGVNMTIRNTAGAVKHQAVAVRNGADLSTFYSCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAKVVFQSCNMYPRLPMAGQFNAITAQGRTDPNQDTGISIHNCSIRAADDLASSSGVATYLGRPWKEYSRTVYMQTQMDDLINGAGWRAWDGDFALSTLYYAEYGNTGPGSNTTNRVTWSGYHVINATDAANFTVSNFLLGDDWLPQTGVSYTDNLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7D297</accession>
    <name>V7D297_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G267700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D297"/>
    <dbReference type="Gramene" id="ESW35818">
        <property type="protein sequence ID" value="ESW35818"/>
        <property type="gene ID" value="PHAVU_001G267700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10263206at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="74" mass="8608" checksum="D71A65F8A0CD77B0" modified="2014-02-19" version="1">MDDAQWVSKHTVAVMNTQFPRLLPVFGGWNFLGGFWSSCGVSFYCFLCQMYSCGFLWGLSFIFLQLCDFVWRIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2W1</accession>
    <name>V7D2W1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase</fullName>
            <ecNumber evidence="3">3.2.1.96</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G245900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Endoglycosidase that releases N-glycans from glycoproteins by cleaving the beta-1,4-glycosidic bond in the N,N'-diacetylchitobiose core. Involved in the production of high-mannose type N-glycans during plant development and fruit maturation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>an N(4)-(oligosaccharide-(1-&gt;3)-[oligosaccharide-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-alpha-D-GlcNAc)-L-asparaginyl-[protein] + H2O = an oligosaccharide-(1-&gt;3)-[oligosaccharide-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-D-GlcNAc + N(4)-(N-acetyl-beta-D-glucosaminyl)-L-asparaginyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:73067"/>
            <dbReference type="Rhea" id="RHEA-COMP:12603"/>
            <dbReference type="Rhea" id="RHEA-COMP:18176"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:132248"/>
            <dbReference type="ChEBI" id="CHEBI:192714"/>
            <dbReference type="ChEBI" id="CHEBI:192715"/>
            <dbReference type="EC" id="3.2.1.96"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 85 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.96" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2W1"/>
    <dbReference type="SMR" id="V7D2W1"/>
    <dbReference type="STRING" id="3885.V7D2W1"/>
    <dbReference type="Gramene" id="ESW35571">
        <property type="protein sequence ID" value="ESW35571"/>
        <property type="gene ID" value="PHAVU_001G245900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGVLQSY"/>
    <dbReference type="OrthoDB" id="284473at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033925">
        <property type="term" value="F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006491">
        <property type="term" value="P:N-glycan processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd06547">
        <property type="entry name" value="GH85_ENGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000043">
        <property type="entry name" value="cytosolic endo-beta-N-acetylglucosaminidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000246">
        <property type="entry name" value="Cytosolic endo-beta-N-acetylglucosaminidase 1 isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032979">
        <property type="entry name" value="ENGase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057882">
        <property type="entry name" value="ENGase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005201">
        <property type="entry name" value="TIM_ENGase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13246:SF1">
        <property type="entry name" value="CYTOSOLIC ENDO-BETA-N-ACETYLGLUCOSAMINIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13246">
        <property type="entry name" value="ENDO BETA N-ACETYLGLUCOSAMINIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03644">
        <property type="entry name" value="Glyco_hydro_85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25529">
        <property type="entry name" value="Ig_ENGASE1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytosolic endo-beta-N-acetylglucosaminidase TIM barrel" evidence="9">
        <location>
            <begin position="126"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="Cytosolic endo-beta-N-acetylglucosaminidase C-terminal" evidence="10">
        <location>
            <begin position="610"/>
            <end position="731"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00034414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00060018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF25529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="733" mass="82203" checksum="8661CA6381AF2460" modified="2014-02-19" version="1">MLKLGFNGGMIHQLLVVYINRQFLIKVRHILRSFVAAVQTSYDFVSMANPKSESVSEPSVSEPPRTQPSVPISYPIKTLEELESRSYFDSFHYPFNRASVPILNGDSSSLPQRRRLLVCHDMAGGYLDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFISEWDEGRAVCDTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDQGQIPNLKEFVDHLSLTMHSSVPGSLVLWYDSVTVDGKLNWQDQLNEQNKPFFDICDGIFVNYTWKEDYPRLSAAVASERKFDVYMGIDVFGRNTYGGGQWNVNVALDLLRKNDVSAAIFAPGWVYETKQAPDFETAQNSWWGLVEKSWGVLRNFPGQLPFYTNFDQGRGYHISVDGDNVSDTAWCNISSQGFQPQIKLVDPANSIQVSVDLKEASYSGGGNITFKGSLEDKTYFESKIFQGGFLLSELPVHFMYTVKSDGNSSLGLKLQFTSTGGDRRASVLLASRAVNHFSNKFSKVIMTRERKGLSSGWVINEGVIAMNGYTLTEIDAVCYRSDSSVNEIRWQHRSNDNDGTLASPSDYFAVLGHITIKTSGYRSDFPVSSSWLFDGTCIKWTSDPQGSKTLDVKISWKLKNENNYQFLKFNVYLVKLSKQAGGNPGTASEDDVKEYLGVAHVSSFYVSDLKVPSDTSTLKFIIQVCGIDGTIQELDESPYYELEVEGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P212</accession>
    <name>A0ACC3P212_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L004337</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967755">
        <property type="protein sequence ID" value="KAK6646249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="603" mass="64474" checksum="B9BAA8D715FB7FC6" modified="2026-01-28" version="1">MELRRRSSSTAAKASDALPLPLHLTNAFFFTLFFSVAYYLLNRWRDKITSSSPLHLLSLSDIAAIFALLASVIYLLGFFGIHFVQSFVVRPADDDEEPSECTSFDKVDGQENDVMMADSITKGAAQPSPLLCTEPVKLVACGVDNDIMVDSVTKGKRVIQPSFQNVKPMVKELVSSIDRVYHDEDDVFIGSVLNGTVPSYSLESRLGDCRRAAAIRREALQRTTGRSLGGLPLEGFDYDAILGQCCEMPVGYVQVPVGVAGPLLLDGAEYTVPMATTEGCLVASTNRGCKAIYASGGATSVILRDGMSRAPVVRFATAKRAAELKFFMEDTLNFDTLAVVFNKSSRFGRLQSIKCSIAGKNVYLRFTSSTGDAMGMNMVSKGVQNVLDFLQSDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEATIKEHIVKKVLKTNVAALVELNMLKNLAGSAVAGALGGYNAHASNIVSAIFISTGQDPAQNVESSHCITMMEAVNDGRDLHISVTMPSIEVGTVGGGTQLPSQSACLNLLGVKGASKDSPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSNRDMSTVSSRQES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADE7</accession>
    <name>V7ADE7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G025800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the MIP/aquaporin (TC 1.A.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADE7"/>
    <dbReference type="SMR" id="V7ADE7"/>
    <dbReference type="STRING" id="3885.V7ADE7"/>
    <dbReference type="Gramene" id="ESW03582">
        <property type="protein sequence ID" value="ESW03582"/>
        <property type="gene ID" value="PHAVU_011G025800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0223">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACIVYYG"/>
    <dbReference type="OrthoDB" id="3222at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="entry name" value="Glycerol uptake facilitator protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47002">
        <property type="entry name" value="AQUAPORIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47002:SF6">
        <property type="entry name" value="X INTRINSIC PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="Aquaporin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="214"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="280" mass="30209" checksum="C9BA0521A2FC5452" modified="2014-02-19" version="1">MWRAALTELTATASLMFTLTTSIVACLDSEEVDPKLLVPFAVFIIAFLFLLVTVPLSGGHMSPVFTFIGALKGVVTLTRALIYVLAQCIGSIIGFFILKCVIDPKLAYTYSLGGCAIDGQRVSFGIKAQNALLVEFACTFVVLFVGVTLAFDKKRSRELGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLHGGSLWHGHWVFWLGPFLACMLYYVVSINLPKEDLVWVEGEHDVLNLALASCFNVYDTSFSKDLPQERSAGFQLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEM1</accession>
    <name>V7AEM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G033800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEM1"/>
    <dbReference type="SMR" id="V7AEM1"/>
    <dbReference type="STRING" id="3885.V7AEM1"/>
    <dbReference type="Gramene" id="ESW03685">
        <property type="protein sequence ID" value="ESW03685"/>
        <property type="gene ID" value="PHAVU_011G033800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0712">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YRRSANM"/>
    <dbReference type="OrthoDB" id="445556at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45432:SF2">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45432">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="3"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="105" mass="11846" checksum="788E1B35AE69C1AA" modified="2014-02-19" version="1">MASLYDVLGISIGASCVEIKAAYRKLARTYHPDVVAMNQKESSAHQFMIIHSAYSTLSDPEKRAQYDTEIYRYRRSANMASMAGRNHTFSCAGGSGRKWETDQCW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHB4</accession>
    <name>V7AHB4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PROP1-like PPR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G1400000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHB4"/>
    <dbReference type="STRING" id="3885.V7AHB4"/>
    <dbReference type="Gramene" id="ESW04959">
        <property type="protein sequence ID" value="ESW04959"/>
        <property type="gene ID" value="PHAVU_011G1400000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CERRNEP"/>
    <dbReference type="OrthoDB" id="1427847at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033443">
        <property type="entry name" value="PROP1-like_PPR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47262">
        <property type="entry name" value="OS02G0132600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47262:SF1">
        <property type="entry name" value="OS02G0132600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17177">
        <property type="entry name" value="PPR_long"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="PROP1-like PPR" evidence="3">
        <location>
            <begin position="3"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="89"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW04959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16923" checksum="1E358A125487C29B" modified="2014-02-19" version="1" fragment="single">VGDALDIVEQMCNAGFYLSTDVLQFILQICEESYEYILVHRIHSIICRYQLKLNGEIGRCLVHFCVRIKDFEGAYKIIGDLEEMNFKPTTNMYNAIMAGYFREKNISGGLRVLKHMQGANVKPDSQTFCYLIHNCETEEDIMQVHSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIK4</accession>
    <name>V7AIK4_PHAVU</name>
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        <recommendedName>
            <fullName evidence="7">Prefoldin subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G115000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RNA polymerase II subunit 5-mediating protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIK4"/>
    <dbReference type="STRING" id="3885.V7AIK4"/>
    <dbReference type="Gramene" id="ESW04668">
        <property type="protein sequence ID" value="ESW04668"/>
        <property type="gene ID" value="PHAVU_011G115000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3130">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MENWAKG"/>
    <dbReference type="OrthoDB" id="21413at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019212">
        <property type="term" value="F:phosphatase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003714">
        <property type="term" value="F:transcription corepressor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000122">
        <property type="term" value="P:negative regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009409">
        <property type="term" value="P:response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23159">
        <property type="entry name" value="Prefoldin_URI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.370:FF:000009">
        <property type="entry name" value="Prefoldin chaperone subunit family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009053">
        <property type="entry name" value="Prefoldin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004127">
        <property type="entry name" value="Prefoldin_subunit_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052255">
        <property type="entry name" value="RNA_pol_II_subunit5-mediator"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00293">
        <property type="entry name" value="prefoldin subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15111">
        <property type="entry name" value="RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15111:SF0">
        <property type="entry name" value="UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02996">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46579">
        <property type="entry name" value="Prefoldin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="106"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00038295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW04668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="170" mass="18839" checksum="C72F1A088EC12A88" modified="2014-02-19" version="1">MEESVKKGTVTSLASLFPVEEAQKAAKRVEEAIAGKHSELDCVRGFIADNNNLVNLVHKLPEELSHDIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKSLDSQVDSLEANIKDLEAEASFFNATASQVAEGLVEIREDYVEKDFNEGESKSGMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL38</accession>
    <name>V7AL38_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G035500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL38"/>
    <dbReference type="Gramene" id="ESW06292">
        <property type="protein sequence ID" value="ESW06292"/>
        <property type="gene ID" value="PHAVU_010G035500g"/>
    </dbReference>
    <dbReference type="OMA" id="RISSIWV"/>
    <dbReference type="OrthoDB" id="10374084at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753342" evidence="1">
        <location>
            <begin position="26"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="8020" checksum="F9825301372A0E2A" modified="2014-02-19" version="1">MASNRISSIWVILFVFVLGLLCARASSPLNVAHASGFHASSYEKIQTKRILGQQRKLLPERAADPCCHNYHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMZ0</accession>
    <name>V7AMZ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">2'-phosphotransferase</fullName>
            <ecNumber evidence="3">2.7.1.160</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G084500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2'-phospho-[ligated tRNA] + NAD(+) = mature tRNA + ADP-alpha-D-ribose 1'',2''-cyclic phosphate + nicotinamide</text>
            <dbReference type="Rhea" id="RHEA:23324"/>
            <dbReference type="Rhea" id="RHEA-COMP:11106"/>
            <dbReference type="Rhea" id="RHEA-COMP:11107"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:76596"/>
            <dbReference type="ChEBI" id="CHEBI:82883"/>
            <dbReference type="ChEBI" id="CHEBI:85027"/>
            <dbReference type="EC" id="2.7.1.160"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KptA/TPT1 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.160" evidence="3"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMZ0"/>
    <dbReference type="SMR" id="V7AMZ0"/>
    <dbReference type="STRING" id="3885.V7AMZ0"/>
    <dbReference type="Gramene" id="ESW06883">
        <property type="protein sequence ID" value="ESW06883"/>
        <property type="gene ID" value="PHAVU_010G084500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06884">
        <property type="protein sequence ID" value="ESW06884"/>
        <property type="gene ID" value="PHAVU_010G084500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2278">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HATWPKI"/>
    <dbReference type="OrthoDB" id="419694at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000215">
        <property type="term" value="F:tRNA 2'-phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006388">
        <property type="term" value="P:tRNA splicing, via endonucleolytic cleavage and ligation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.170.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.970">
        <property type="entry name" value="RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002745">
        <property type="entry name" value="Ptrans_KptA/Tpt1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042081">
        <property type="entry name" value="RNA_2'-PTrans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042080">
        <property type="entry name" value="RNA_2'-PTrans_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12684">
        <property type="entry name" value="PUTATIVE PHOSPHOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12684:SF2">
        <property type="entry name" value="TRNA 2'-PHOSPHOTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01885">
        <property type="entry name" value="PTS_2-RNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56399">
        <property type="entry name" value="ADP-ribosylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="46"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="62"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW06884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="292" mass="32709" checksum="82BABC4A4D229F97" modified="2014-02-19" version="1">MFASVSNSSINILRHCALLRPRVLNLGFGSLLHRFGASAPMDNGRNNPFSSYAHASPSGRGKAFDMRNDREKTRGRGGGSGSGKDKIDALGRLLTRILRHMASELNLNMRNDGFVKVKDLLKLNMKTFANIPLRSHTVDDIKEAVRRDNKQRFSLMEEYGELLIRANQGHTVTTVETESLLKPILSAEEVPVCVHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFIDVRKALEEGMKLYISDNKVILTEGFDGVVPPKFFEKIESWPARHPIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN25</accession>
    <name>V7AN25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 20">Peroxidase</fullName>
            <ecNumber evidence="5 20">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_010G066600g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="17 20">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="17 20">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 20">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="20">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="5 20"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN25"/>
    <dbReference type="SMR" id="V7AN25"/>
    <dbReference type="STRING" id="3885.V7AN25"/>
    <dbReference type="Gramene" id="ESW06670">
        <property type="protein sequence ID" value="ESW06670"/>
        <property type="gene ID" value="PHAVU_010G066600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAQCTNF"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7AN25"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000009">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF132">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 17 20" id="KW-0106">Calcium</keyword>
    <keyword evidence="13 19" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 20" id="KW-0349">Heme</keyword>
    <keyword evidence="20" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="12 17 20" id="KW-0408">Iron</keyword>
    <keyword evidence="8 17 20" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 20" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="20" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 20" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148938" description="Peroxidase" evidence="20">
        <location>
            <begin position="24"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="21">
        <location>
            <begin position="43"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="256"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="18">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="53"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="86"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="139"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="218"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW06670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="36095" checksum="CDCB789C45942F91" modified="2014-02-19" version="1">MAGSSQQRVKICLVLCLVGIVSAAEYSTSSSSTTSSGSSSNYLLNPLFYVSKCPRALDTIKKLVTNAVLYEPRMGASLLRLHFHDCFVQGCDASVLLKDTATFKGEQGALPNVNSLRGFEVIENIKAELERQCPGVVSCADILTVAARDSVVALGGVGWPLGLGRRDSTTASLSGANSDLPSPFLNFDGLVAAFQKKRFTVNEMVALSGAHTIGSARCLLFRSRIYNATDIDSSYAEELKANCPKQGGDSNLSPIDTTSKNVFDSSYYTNLISKKGLFHSDQQLFSGVSAALQVKTYSSFPLLFKFDFANAMVKMSNLSPLTGNQGQIRNVCSRVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANM1</accession>
    <name>V7ANM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RAVE complex protein Rav1 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G115000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7ANM1"/>
    <dbReference type="Gramene" id="ESW07262">
        <property type="protein sequence ID" value="ESW07262"/>
        <property type="gene ID" value="PHAVU_010G115000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1064">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="342131at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043291">
        <property type="term" value="C:RAVE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007035">
        <property type="term" value="P:vacuolar acidification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001240">
        <property type="entry name" value="Transducin family protein / WD-40 repeat family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052208">
        <property type="entry name" value="DmX-like/RAVE_component"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022033">
        <property type="entry name" value="Rav1p_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13950:SF9">
        <property type="entry name" value="RABCONNECTIN-3A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13950">
        <property type="entry name" value="RABCONNECTIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12234">
        <property type="entry name" value="Rav1p_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="RAVE complex protein Rav1 C-terminal" evidence="3">
        <location>
            <begin position="800"/>
            <end position="1408"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="1">
        <location>
            <begin position="2427"/>
            <end position="2468"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="2016"/>
            <end position="2041"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW07262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="2528" mass="281438" checksum="A0808675E5AF5020" modified="2014-02-19" version="1">MAESDTSIRNTKMNPIDHLPLCLLRSDTVPPAPTFSESTVDFLPHFSGYSWIAYAASSLLVISHFPSPLSPHQSRIGPIFRQSFQLSPDPLAAVAWSPRSPSSGDLAAAADNCICLFHHDSTTVKGSFCWSQNAVLVQHTKVANIKWTGSGDGIISVGMEVVFWKKSNKCWEVAWKFKADQPQTLVSATWSIEGPSATAAHPSKEQIEGALTNEESKCIVVCQSNGLSEYSKVELHHPLPVVMIQWRPPRGKLSNRYGKCSVRHVLLTCSLDGTARLWSETNNGKGRRVGKDINDQKNAGCSFSVVAVIEINQTLNGTLGSDIFVRWGTEFEGIFRIGEESKQVFSKDGFEHDVRNCDWIVGFGPGMLLSFWAVHCLDDVSPLRFPRVTLWKRHELQNHDIANVYKFNSSDFKNALFLQKVILMRNCLSGPPIICSPLQLLSCNSLVWSNFRILTIHDAVENSIDNGNTDSMSPYLTGGVLNLDGHSGKILKVSIHPYSCKVQFAASLDSNGLLLFWSLTNISNCILGCPTLVPTMELCGKLATQDSCSLYTSLTWAPSIVGDKLFFFMGHTRGIDCFIVNICRTDEENIECHYLCTIPFNGHGPYEDGPIDIFTIPLNSACDKTCCNSKLMLLAVWMGRFQALSWEVNLHSFDMSTNCSECNFDAKSIDDCSVWAFESTFADKKYCITVNPCSCEFPSSNDLVTSFAVANPGTLSHIRQEFGFANDLCSSYPTYIMVTGSSNGILKLWKSKPGNSLTQHLPWELVGVFVAHDGPIKGICFSDCGEKIATIGHESNSNAINTIHIWDAVPLINAGTFILEDKIKTNSDVIALKWLTLGTGELLLGVCLQNELQIYAPKRCIGTTLSNSEHFPKMNIWVRIAYAHTSIPIYDFLWGPRAAAVVIHRNYFSIFSHWLFHMDKRQGSNCHPCDSKPNAYNCEDEIYEDILSTVFTEYDIGALREQTDGDSQVDFNYVQSIKKINIKDNSSSLFLAKEQLKFELLTKVGLWSILEVSEIISGSLPTYHPDVLLTNISSGNWKRAYVAVRHLVECLTSTYDPKKRHISKRIGLPNIVLSNYLEGCISKVSQGKGFQWGGDSASISQAQSSLFQFPYHSGSNAENESIFSTKSELNGFIGSLEKFPDLPLLIDIEKTQILAIIDLLSEVSSAHSSSAYQSLDEPGRRFWVALRFRQLHFLRKFGRAASFEELPVNSRLFVWAYHSDSLDNLFGSVMPNEPSWQEMHALGLGFWYANIPQLRARMEKLARAQYLKNKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQDEKNKAAALKNAYVLLGRHQMELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVDGHGGSLEHHLITKYILPSAIDKGDYWLASLLEWEMGNYYRSFYRMLEYSVNPGPPESTVMSNCGSFLDPTVGFYCQMLATKNSMRNAVGEHNSAILLRWATLMTVASLKRCGNPLEALEYFSSSLSMPGTADQDSELGDNHDVLSNTLKPLPREGSNWLSANVSMHLEFHIKLNLALCYLSKLIREHPSWLDTFSEYNEEASDSDEYMMYYEKSVESFKQKLYSGLALFEQRFLLAPHCLIGMILLLLCHHGSLYIGYDMTDGSTQGELSQKKSDMFDDFNLCYSRITPLFKTVEEVSFLYSRLFCACSMENSQRDSFIDSKPKFFYASECRIEGVFISLWFLRATLRIQLSSTSKDLIKTLLDILDFYEYYLHFSLAWLQKNSEVLLYMVEPFFVAQSNGHNPYDIDMVNLKKLIPKVGQLLSQTSSIPSVQNLQLSERDMKHSIPDDERWKILGTCLWQHMSRFMISNLNSVLAKLEDGNLSGPFHRKYAYGESCIISMDSESISLPEKIRIVSYSLCDLLMTTVTHISSYLVKQHVEFLWQKVKNDLNVQTLEWLKHKSEFSQNQNLDVLEPGNRKDYSVHQLLWDHSADPKLILDCFAQEKINWPNDLDHMHTKGWNDLSMSMTGLHKTDDTCGDDFNLSNRSSNHEVGTPVKETSLNGHHSARSNQKDITSTNFAVFQSPREMYKRNGELLEALCINSTCQQEAAVASNRKGIMFFHLEDEIPHSGKSNGLLWATADWPQNGWAGSESTPTPTCVSPGVGLGSKKGAHLGLGGATVGVDSSTWPSNDLTGGGVLGMLGYADIGASRLGWEIQQDFEDFVDPPATLDNISTRALSSHPMRPFFLVGSSNTHIYLWEFNKDKATATYGVLPAANVPPPYALASISALQFDHFGHRFASAALDGTVCTWQLEVGGRSNVRPIESSLCFNGHASDVTYFSSSGSIIAVAGYSSNGVNVVIWDTLAPPTTSRASILCHEGGAQTVSVSDNHVGSGSVSPLIVTGGKGGDVGLHDFRYIATGKAKRHRHTDNIGQSSAKSLARDKDQNVDGMLWYIPKAHSGSVTKVVTIPNTSLFLTGSTDGDVKLWDAQSTKLVHHWSKIHEKHTFLQPSSRGFGGVVRAAVTDIKVVSNGFLTCGGDGTVKLVRLDNHLRAWPLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7APE8</accession>
    <name>V7APE8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Protein PIN-LIKES 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G051100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the auxin efflux carrier (TC 2.A.69.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APE8"/>
    <dbReference type="STRING" id="3885.V7APE8"/>
    <dbReference type="Gramene" id="ESW06478">
        <property type="protein sequence ID" value="ESW06478"/>
        <property type="gene ID" value="PHAVU_010G051100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2722">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NVCYKNA"/>
    <dbReference type="OrthoDB" id="191139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080162">
        <property type="term" value="P:endoplasmic reticulum to cytosol auxin transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_transp_PIN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045033">
        <property type="entry name" value="PILS1/3/4/5/7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31651">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31651:SF44">
        <property type="entry name" value="AUXIN EFFLUX CARRIER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="258"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="300"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="333"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="367"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="400"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="425" mass="46252" checksum="7BCF415681F168EF" modified="2014-02-19" version="1">MEFWKLFVVALMPVLKVLLITALGTILAINRFHILGENTRKNLNTLVYFVFSPALVCSSLAETITLRSVVILWFMPVNILLTFVIGSLLGFLLVKLTKVPHHLQGLVLGCCASGNLGNLPIIIVPALCKQSGNPFGDVNVCSKNALAYASLSMALGSVYIWSYAYNLVRLYAPKICNEAKIVENSMKNSMSITKSDLENPSTCSKGLPVVSVIDDKSQSEDHVKHFEIHCTKCDDGKTEEAQKVEMIMKQLKRLIKKINLKILFTPSTIGAIVGLIIGVVPQFRKLLIGDKAPFHVVEDSIVMVGYACIPVMTLLVGANLMKGLNGFGKGLPMIVGITVIRCIVLPGIGVGIVKCVVHLGLIHPDPLYEFVLLLQFAVPPAVSLSTITQLFGVGEGECSVIMLATYSCAAVSVTLWSTFYMWLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR26</accession>
    <name>V7AR26_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Proteasome subunit alpha type</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G065200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the peptidase T1A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR26"/>
    <dbReference type="SMR" id="V7AR26"/>
    <dbReference type="STRING" id="3885.V7AR26"/>
    <dbReference type="Gramene" id="ESW06646">
        <property type="protein sequence ID" value="ESW06646"/>
        <property type="gene ID" value="PHAVU_010G065200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06647">
        <property type="protein sequence ID" value="ESW06647"/>
        <property type="gene ID" value="PHAVU_010G065200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0178">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVLNDNM"/>
    <dbReference type="OrthoDB" id="431557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019773">
        <property type="term" value="C:proteasome core complex, alpha-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03752">
        <property type="entry name" value="proteasome_alpha_type_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.10:FF:000031">
        <property type="entry name" value="Proteasome subunit alpha type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003075">
        <property type="entry name" value="PRK03996.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00388">
        <property type="entry name" value="PROTEASOME_ALPHA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2 4 5" id="KW-0647">Proteasome</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome alpha-type subunits" evidence="6">
        <location>
            <begin position="5"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW06646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="27345" checksum="2194FB8613DD1347" modified="2014-02-19" version="1">MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLSPSGKVKYEVCSAESLTKLLVKFGVTQPATDTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR69</accession>
    <name>V7AR69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotransferase-like plant mobile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G069700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR69"/>
    <dbReference type="STRING" id="3885.V7AR69"/>
    <dbReference type="Gramene" id="ESW06701">
        <property type="protein sequence ID" value="ESW06701"/>
        <property type="gene ID" value="PHAVU_010G069700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR1U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DDQVIWK"/>
    <dbReference type="OrthoDB" id="684301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010073">
        <property type="term" value="P:meristem maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019557">
        <property type="entry name" value="AminoTfrase-like_pln_mobile"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044824">
        <property type="entry name" value="MAIN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033">
        <property type="entry name" value="PROTEIN MAIN-LIKE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033:SF8">
        <property type="entry name" value="PROTEIN MAINTENANCE OF MERISTEMS-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10536">
        <property type="entry name" value="PMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotransferase-like plant mobile" evidence="3">
        <location>
            <begin position="50"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="303"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="490"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="305"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="569" mass="64781" checksum="684B72856784B2BB" modified="2014-02-19" version="1">MRKSARLSAIGLAQAPEPTKPFSTRFTLRSYAKRVQLLTPEQRSAISRAGFGNLLSVPNYLLNKVFLTELMEAWSCEGRAFVLRSGGEIRMTLLDAALILGLPVTGNPVNLTEQEAFSDLEESYGATKVKRKVAMSFLENRLDSIGDAVSDDFLRSFLLYTIGTFLASNDGKVDSRFLRFLGDLGEVSGFAWGAVVVDDLCQWLDKRKEQRVQYVGGCLIFLQTWSYEHFDVAARPQLQDHDFTFPRMCRWDNIKSNQRQQCTSWFKELDDDQVIWKLQLTSGELQIEIIKEALELIGDNKELQSAESRSTSTPSSVSDADSGFRHSINSEVYREDEDNMENQVVEDTPTRSSTSHEKYRKQTNLGDLVVLDTPPNLISCDKVRGEQERDPVVVVEDSLTTISIADEVRGDNGEKLIVEDTPPDVTICDKVRREQEMNLENLGLVVEDTPTTISFSDEVGGDQEFKSEKLFVENTPPKLSFYDDDIRQKNVTLEEENTELKVKTDQLMEENELLRTQILSNTQFEEQNAELKKELDLLREENRILRLSINSFLDRMDRHILDFESNATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARS2</accession>
    <name>V7ARS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G032400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the JARID1 histone demethylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARS2"/>
    <dbReference type="SMR" id="V7ARS2"/>
    <dbReference type="STRING" id="3885.V7ARS2"/>
    <dbReference type="Gramene" id="ESW08264">
        <property type="protein sequence ID" value="ESW08264"/>
        <property type="gene ID" value="PHAVU_009G032400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2130">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AIFSIWK"/>
    <dbReference type="OrthoDB" id="424465at2759"/>
    <dbReference type="PhylomeDB" id="V7ARS2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.650:FF:000045">
        <property type="entry name" value="F-box protein At1g78280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041667">
        <property type="entry name" value="Cupin_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050910">
        <property type="entry name" value="JMJD6_ArgDemeth/LysHydrox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12480">
        <property type="entry name" value="ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12480:SF35">
        <property type="entry name" value="TRANSCRIPTION FACTOR JUMONJI, JMJC DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13621">
        <property type="entry name" value="Cupin_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="JmjC" evidence="8">
        <location>
            <begin position="215"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="962" mass="109808" checksum="A8EEBEAD4C71AFC2" modified="2014-02-19" version="1">MESQRDRRTEALGDLRVLSDEILCAILERFTPRDVARVACVSSVMYTLCNEEPLWMSLCLKGTSGSLQYKGSWKKTVLHNLNLPDKYKEYHRGPLYFDGFNSLFLYRRLYRCHTTLGAFHADTGNVQRIKDISLKEFYNEYDAKKPVMLSGLADTWPARHKWTTDQLLLNYGDVAFKISQRGARKVSMKFKDYVSYMKVQHDEDPLYIFDEKFGETAPSLLKDYCVPHLFEEDFFDILDTDKRPSYRWFIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLAEEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYHHKGVCRVGLLALDEDGYENVRQNMPCNEKNSSYNDLLRKEKRAKIQKDADGLNDERAINGVSRSYNLWKDGFSYDINFLSMFLDKDRDHYSALWSSGNSIGQRELREWLSKLWIQKPKLRELIWKGACIALNANKWLECLSKICVFHNLPPPTDDERLPVGTGSNPVYLVGNSVVKIFVEGGLEASLYGLGTELEFQSRLREANSPLSKHIPDVLASGIIYLENGSCTNLSWDGKGVPDVIVKSNIISRKCSVDDFSFGVWGRKQLEYRNAGIPVDGSGSLAGNSNIWPYVITKRCEGNIFAELRDKLTWEDTTNLASFLGEQLNYLHLLSYPPPNISSFSDIDHELSLVGANGCIATVNSKSNVTAEWWLFTRTLTKMRKDLSSRLTKWGDPIPCKLIEKIDEYIPPDFAENFGNYACKHCSWIHTDVMDDNICMKPSMVCSTTAGNNEDITIVDNGLLSNYEVKSWCPSHILDFSDLSIGDPLVDLIPIYLDVFRGDSRLLKKFLESYKLPFVSEVSRWESTEGDQKFGRLSYLAMCYCILHHDNVLGALFSLWEELRSAKSWEEVELAVWGELNNYKGFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AS06</accession>
    <name>V7AS06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G093200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AS06"/>
    <dbReference type="SMR" id="V7AS06"/>
    <dbReference type="STRING" id="3885.V7AS06"/>
    <dbReference type="Gramene" id="ESW06991">
        <property type="protein sequence ID" value="ESW06991"/>
        <property type="gene ID" value="PHAVU_010G093200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HALCDSN"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050872">
        <property type="entry name" value="PPR_P_subfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128">
        <property type="entry name" value="MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128:SF66">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="106"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="141"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="251"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="286"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="391"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="427"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="463"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="533"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="568"/>
            <end position="602"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="634" mass="71173" checksum="CB72F10006157D16" modified="2014-02-19" version="1">MHTSLAPIIRRPKLVPLSNLSRSLSPHNSQNAPSKHNIATIIHSLCDARRFSEAHHRFSLSLVSGSLPDARTCNVLLARILASRTPHATWRLIQSLIASKPGFVPSLVNYNRLMDQFCVAHQPLDAHRLFFDMKSRGHCPNVVSFTTLIKGYCLVRGIRDARKVFDEMLESGVEPNSVTYSVLIRGVLRERDVEGGRELMCRLWEMMSVEAEDSVKTAAFANLVDSLCREGFFGEVFRIAEELPFGSGFSEEVAYGQMVDSLCRVGRHNGAARIFYVMRKRGFVPSEVSYNYVIHGLSRDGDCMRAYQLLEEGAEFGFILSEHTYKVLVEALCEVLDVDKAKEVLKLMLSKEGVNKTRIYNIYLRALCLVNNPTELLNVLVFMLENQCHADVITLNTVINGFCKMGRVDEASKVLHDMLMGKFAAPDVVTFTTLISGMLDAARINEALDLFHKLMPENGIKPSVVTYNALLRGLFKLKRPNDALMVLDDMVNDGITADSTTYTVVVEGLCESDQVEEAKRFWHNVIWPSGVHDNFVYAAILKGFCRSGNFMEACHFLYELVDSGVSPNIFSYNILINCACNLGLKSEAYQIVREMKKNGLTPDSVTWRILDKLNGKEGKDIDFEDPTMSTFDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU47</accession>
    <name>V7AU47_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Beta-adaptin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G105700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Adaptor protein complexes are heterotetramers composed of two large adaptins (beta-type subunit and alpha-type or delta-type or epsilon-type or gamma-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the adaptor complexes large subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU47"/>
    <dbReference type="SMR" id="V7AU47"/>
    <dbReference type="STRING" id="3885.V7AU47"/>
    <dbReference type="Gramene" id="ESW09162">
        <property type="protein sequence ID" value="ESW09162"/>
        <property type="gene ID" value="PHAVU_009G105700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1061">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10254310at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030131">
        <property type="term" value="C:clathrin adaptor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030276">
        <property type="term" value="F:clathrin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.310.10:FF:000014">
        <property type="entry name" value="Beta-adaptin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000113">
        <property type="entry name" value="Beta-adaptin-like protein A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.10">
        <property type="entry name" value="TATA-Binding Protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026739">
        <property type="entry name" value="AP_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016342">
        <property type="entry name" value="AP_complex_bsu_1_2_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015151">
        <property type="entry name" value="B-adaptin_app_sub_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002553">
        <property type="entry name" value="Clathrin/coatomer_adapt-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012295">
        <property type="entry name" value="TBP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11134">
        <property type="entry name" value="ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01602">
        <property type="entry name" value="Adaptin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09066">
        <property type="entry name" value="B2-adapt-app_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002291">
        <property type="entry name" value="AP_complex_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01020">
        <property type="entry name" value="B2-adapt-app_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Beta-adaptin appendage C-terminal subdomain" evidence="8">
        <location>
            <begin position="775"/>
            <end position="892"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="677"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="10"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="57"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="686"/>
            <end position="704"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="707"/>
            <end position="729"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR002291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="897" mass="99017" checksum="05F8035BD0254D55" modified="2014-02-19" version="1">MKERRPRQSGLATSASHTSKVYPSDLTFSEETKGRSNRLRRRSTQLSVAMAPPPPQSHRSPSPSQPSGKSEVSDLKSQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFLATLKHLMLNDPDTQVVANCLSALQEIWTLESSTSEEAARERETLLSKPVVYHLLNRIKEFSEWAQCLVLEFVSKYIPADSSEIFDMMNLLEDRLQHANGAVVLATVKLFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHLLVLRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETKKALGAALAAGLADLHQDVHDRALFYYRLLQYNVSVAESVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELGNLSITAESGESVVPAQRVEANDKDLLLSTSEKDEGREPGSNGSAYNAPSYNGSSAPSTTSQPLADLAFPSTGISGQASASSLAIDDLLGLDFAVGTAATPSPPPPPPLNLNPKAVLDPGTFQQKWRQLPISISEEYSLSPQGIASLTTPNALLRHMQSHSIHCIASGGQSPNFKFFFFAQKAEAASIYLVECIINTSSAKSQIKVKADDQSSSQAFSTLFQSALSKFGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW24</accession>
    <name>V7AW24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G044800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW24"/>
    <dbReference type="Gramene" id="ESW08426">
        <property type="protein sequence ID" value="ESW08426"/>
        <property type="gene ID" value="PHAVU_009G044800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUVJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GDFCTYE"/>
    <dbReference type="OrthoDB" id="433924at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36395">
        <property type="entry name" value="RING-H2 ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36395:SF1">
        <property type="entry name" value="RING-H2 ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754167" description="Nudix hydrolase domain-containing protein" evidence="2">
        <location>
            <begin position="31"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="154"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="166"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="288" mass="31512" checksum="BC6EA4BF68F35D2A" modified="2014-02-19" version="1">MFPPPQPLTTLPSLPDLILTALSVCFLVSSSKPNIASTRCPFPRRFLKFPAMSLTATPSKNTSTATALNTLPPRRHSFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLEVSQGETSLADSTPPIRTVHVVLVRVTAKDGKLLVESHQELSDGNVRKRGRPLSEKMKPNEDPESAAVRGIFEELGSAIVGAGPNPEFADIVTIDPNSYEMRVEERDSGSYPGLPGCYVLHTVSATVEGLPDGDFCTYEVDEYEGVLDEKNLADRAVSVKKHYWTWVSADSIHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWT7</accession>
    <name>V7AWT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Alpha-N-acetylglucosaminidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G182100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWT7"/>
    <dbReference type="SMR" id="V7AWT7"/>
    <dbReference type="STRING" id="3885.V7AWT7"/>
    <dbReference type="Gramene" id="ESW10117">
        <property type="protein sequence ID" value="ESW10117"/>
        <property type="gene ID" value="PHAVU_009G182100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2233">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKACFIV"/>
    <dbReference type="OrthoDB" id="64736at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.379.10">
        <property type="entry name" value="Chitobiase/beta-hexosaminidase domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.670">
        <property type="entry name" value="N-acetyl-b-d-glucoasminidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029018">
        <property type="entry name" value="Hex-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007781">
        <property type="entry name" value="NAGLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024732">
        <property type="entry name" value="NAGLU_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024240">
        <property type="entry name" value="NAGLU_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024733">
        <property type="entry name" value="NAGLU_tim-barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12872">
        <property type="entry name" value="ALPHA-N-ACETYLGLUCOSAMINIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12872:SF3">
        <property type="entry name" value="ALPHA-N-ACETYLGLUCOSAMINIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05089">
        <property type="entry name" value="NAGLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12972">
        <property type="entry name" value="NAGLU_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12971">
        <property type="entry name" value="NAGLU_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753851" description="Alpha-N-acetylglucosaminidase" evidence="2">
        <location>
            <begin position="23"/>
            <end position="777"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha-N-acetylglucosaminidase N-terminal" evidence="4">
        <location>
            <begin position="48"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha-N-acetylglucosaminidase tim-barrel" evidence="3">
        <location>
            <begin position="158"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha-N-acetylglucosaminidase C-terminal" evidence="5">
        <location>
            <begin position="470"/>
            <end position="761"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="777" mass="89762" checksum="C7A9B455EF62B419" modified="2014-02-19" version="1">MNLPFPAIFLIFIFSIPSSSTAATGVNAISRLIEIQDRERAPPSVQEAAARGVLLRLLPSQSSSFQFRIKQCGGEYCFVIKNHPSFATPGDPQILIEGTTGVDIVSGLHWYLKHWCGSHISWDKTGGSQLFSLPNVGFLPRIPHSAGISVQRPIPWSYYQNAVTSSYSFAWWDWERWEKEIDWMALQGVNLPLAFTGQEAIWQKVFQEKFNMSMSDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDKQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDPLFIEIGKAFIEKQLQEYGRTGHIYNCDTFDENTPPIDDPEYISSLGAATFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPLGKLVVLDLFAEVKPIWVTSEQFYGVPYIWKVGVGMSMEGIEQNPIVYDLMSEMAFQQKKIDVKAWVDMYSTRRYGKSLPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVQYDQSHHYYRPSGTVIKEITDPFDRPHLWYSTSEVIYALELFITIGDELSRSKTYRYDLVDLTRQVLAKYANELFFKVIEAYKSHDVHGMTLLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKQLAQNEEQERQFEWNARTQITMWFDNTKEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLERGEDFKLIEWRREWIKLTNEWQKSRNTFPVESKGDALNTSRWLFNKYLNLTNTETKLIEVQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXJ7</accession>
    <name>V7AXJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Importin N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G118700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the exportin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXJ7"/>
    <dbReference type="SMR" id="V7AXJ7"/>
    <dbReference type="STRING" id="3885.V7AXJ7"/>
    <dbReference type="Gramene" id="ESW09333">
        <property type="protein sequence ID" value="ESW09333"/>
        <property type="gene ID" value="PHAVU_009G118700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1410">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DCFHELC"/>
    <dbReference type="OrthoDB" id="244158at2759"/>
    <dbReference type="PhylomeDB" id="V7AXJ7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005643">
        <property type="term" value="C:nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005049">
        <property type="term" value="F:nuclear export signal receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006611">
        <property type="term" value="P:protein export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000158">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000263">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001494">
        <property type="entry name" value="Importin-beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057947">
        <property type="entry name" value="TPR_XPO7/RBP17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044189">
        <property type="entry name" value="XPO4/7-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596">
        <property type="entry name" value="EXPORTIN 4,7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12596:SF2">
        <property type="entry name" value="EXPORTIN-7 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03810">
        <property type="entry name" value="IBN_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25795">
        <property type="entry name" value="TPR_XPO7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Importin N-terminal" evidence="8">
        <location>
            <begin position="25"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="Exportin-7/Ran-binding protein 17 TPR repeats" evidence="9">
        <location>
            <begin position="410"/>
            <end position="651"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF25795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW09333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1051" mass="119552" checksum="CA757EF9F971CD69" modified="2014-02-19" version="1">MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLALKLRLDIWTYLINYLATRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLKILSQLISEMNQANAGMPATNHRRVACSFRDQHLFQIFQISLTSLGQLKNDVVNQLQELALALSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKPVLEDSSTLQIFFDYYGITKPPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKVILQTGQGLADHDNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVSSVPYLKGDAPSLLDEFVPKITESFITSRFNSVQAGLPDDLSENPLDNAELLQDQLDCFPYLCRFQYESSSLFIINVMEPVLQIYTERTRIHVPDNSDLSVIEDKLAWIVHIIAAILKIKQCTGCSLESQEVLDAELSARVLQLINVTDNGIHSQRYGEISKQRLDRAILTFFQHFRKSYVGDQAIHSSKQLYTRLSELLGLHDHLLLLNVIIGKIVTNLKCYTESEEVIDHTLSLFLELASGYMTGKLLLKLDTVKFIVANHTREHFPFLEAKRCTRSRTTFYYTIGWLIFMEDSPMKFKSSMDPLQQVFLSLESTPDAVFRTDAVRFALVGLMRDLRGIAMATNSRRTYGFLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYTYKYKGIWICLTILSRALSGNYVNFGVFELYGDRALSDVLDASLKMTLSIPMSDILAYRKLTRAYFAFLEVLFNSHITFVLNLDSNTFMHMVGSLESGLKGLDTSISSQCASAVDNLAAFYFNNITMGEAPNLPASVNLARHIAECPNLFPEILKTLFEIILFEDCGNQWSLSRPMLSLILINEQIFSDLKARILSSQPMDQHQRLSSCFDKLMADVTLSIDSKNRDKFTQNLTVFRHEFRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AY40</accession>
    <name>V7AY40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Protein ATEB1 homolog 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G188500g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
            <location evidence="9">Cytoskeleton</location>
            <location evidence="9">Phragmoplast</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
            <location evidence="1">Spindle pole</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MAPRE family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AY40"/>
    <dbReference type="SMR" id="V7AY40"/>
    <dbReference type="STRING" id="3885.V7AY40"/>
    <dbReference type="Gramene" id="ESW10190">
        <property type="protein sequence ID" value="ESW10190"/>
        <property type="gene ID" value="PHAVU_009G188500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3000">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TVLEHEY"/>
    <dbReference type="OrthoDB" id="2119228at2759"/>
    <dbReference type="PhylomeDB" id="V7AY40"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010005">
        <property type="term" value="C:cortical microtubule, transverse to long axis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005815">
        <property type="term" value="C:microtubule organizing center"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009524">
        <property type="term" value="C:phragmoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000922">
        <property type="term" value="C:spindle pole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001578">
        <property type="term" value="P:microtubule bundle formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009652">
        <property type="term" value="P:thigmotropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.1430:FF:000004">
        <property type="entry name" value="Microtubule-associated protein RP/EB family member 1B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.418.10:FF:000028">
        <property type="entry name" value="RP/EB family microtubule-associated protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.10">
        <property type="entry name" value="Calponin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001715">
        <property type="entry name" value="CH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036872">
        <property type="entry name" value="CH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004953">
        <property type="entry name" value="EB1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036133">
        <property type="entry name" value="EB1_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027328">
        <property type="entry name" value="MAPRE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10623">
        <property type="entry name" value="MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00307">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03271">
        <property type="entry name" value="EB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47576">
        <property type="entry name" value="Calponin-homology domain, CH-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140612">
        <property type="entry name" value="EB1 dimerisation domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50021">
        <property type="entry name" value="CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51230">
        <property type="entry name" value="EB1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="5 11" id="KW-0493">Microtubule</keyword>
    <keyword evidence="6" id="KW-0498">Mitosis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calponin-homology (CH)" evidence="13">
        <location>
            <begin position="13"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="EB1 C-terminal" evidence="14">
        <location>
            <begin position="176"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="128"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="146"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00060413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00083920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW10190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="31083" checksum="93896161CC0DA95E" modified="2014-02-19" version="1">MASSIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVGRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRGSKGGNRNVKGIKSSKSLQTNTMNHSGSGDSLRSKQLRSSGGADGANASADIQALSKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQASELEEDPMSQAIKKILYAADAKGSALDEAQEYLNEVINGVEGEGEVEGEVEVEAETET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYJ8</accession>
    <name>V7AYJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">RecA family profile 2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G231500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in recombination ability and DNA strand transfer activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the RecA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYJ8"/>
    <dbReference type="SMR" id="V7AYJ8"/>
    <dbReference type="STRING" id="3885.V7AYJ8"/>
    <dbReference type="Gramene" id="ESW10712">
        <property type="protein sequence ID" value="ESW10712"/>
        <property type="gene ID" value="PHAVU_009G231500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1433">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWIWINS"/>
    <dbReference type="OrthoDB" id="5957327at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00983">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000087">
        <property type="entry name" value="Recombinase RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00268">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013765">
        <property type="entry name" value="DNA_recomb/repair_RecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020584">
        <property type="entry name" value="DNA_recomb/repair_RecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049261">
        <property type="entry name" value="RecA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049428">
        <property type="entry name" value="RecA-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023400">
        <property type="entry name" value="RecA_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020587">
        <property type="entry name" value="RecA_monomer-monomer_interface"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02012">
        <property type="entry name" value="tigrfam_recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900:SF14">
        <property type="entry name" value="DNA REPAIR AND RECOMBINATION PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900">
        <property type="entry name" value="RECA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21096">
        <property type="entry name" value="RecA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00154">
        <property type="entry name" value="RecA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00142">
        <property type="entry name" value="RECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54752">
        <property type="entry name" value="RecA protein, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00321">
        <property type="entry name" value="RECA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50163">
        <property type="entry name" value="RECA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 8" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RecA family profile 1" evidence="10">
        <location>
            <begin position="94"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="RecA family profile 2" evidence="11">
        <location>
            <begin position="263"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00056887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW10712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="425" mass="45843" checksum="CCB032119BA4E503" modified="2014-02-19" version="1">MAWLLRTASSSILKRSFFHSDLLTRFCFKPGLLGTSQVLSFSTRRRRSKSDGSDSGEENMSKKDVALQQAIDQITSAYGKGSIMWLGRSVSPKNIAVVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKLGGYCAFVDAEHALDKTLAESIGVNTKNLLLSQPDCGEQALGLVDTLIRSGSIDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILVFINQVRSKISTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETLGSQVLVKVVKNKHAPPFKTAQFELEFGKGISRESEVIELSIKYKLIRKSGSFYEYNGQNFHGKDALKRFLVDSDGLQELATKLREKILNVEPELDPEDPAMNGDVMEEMVSLDSTDETAAAAAVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ02</accession>
    <name>V7AZ02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF632 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G237700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ02"/>
    <dbReference type="STRING" id="3885.V7AZ02"/>
    <dbReference type="Gramene" id="ESW10783">
        <property type="protein sequence ID" value="ESW10783"/>
        <property type="gene ID" value="PHAVU_009G237700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10784">
        <property type="protein sequence ID" value="ESW10784"/>
        <property type="gene ID" value="PHAVU_009G237700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQT4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PMNPSIF"/>
    <dbReference type="OrthoDB" id="663995at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006868">
        <property type="entry name" value="DUF630"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006867">
        <property type="entry name" value="DUF632"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21450:SF60">
        <property type="entry name" value="DUF630 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21450">
        <property type="entry name" value="PROTEIN ALTERED PHOSPHATE STARVATION RESPONSE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04783">
        <property type="entry name" value="DUF630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04782">
        <property type="entry name" value="DUF632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF630" evidence="3">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="DUF632" evidence="2">
        <location>
            <begin position="353"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="241"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="241"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="261"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="776" mass="87378" checksum="D0BB4A2CA98EEBC4" modified="2014-02-19" version="1">MGCSHSRLDDEEAVQLCRDRKKFIKEAVEQRTRLATGHIAYIESLKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKKNGPGFIPISAKPFATTAAIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPEMVRVETYYSPMQQYGIDGFFNMQSSPVNPSIFAYSPNNRPNIPPPSPQASQWDFFWNPFSSLDSYGYPAKSIDHTAMDDEYRGLRQVREEEGIPDLEEDETEHEVCVGKRNVAEERTRPNMNSSKEEVIVEDVEDDDDDDEEEEEEEEVEEEEEEETDIEDETEHVAKDSQAHVSASFEVSKAQAAGHIESSHRKMTIGKQEAVEETPGFTVYVNRRPTSMAEVINDIETQFTIVYNAANDVAALLEAKKSQYLLSSSELSGSKLLNPVALLRSASSRSSSSRYLVNCSNTGKEGCDSTKGLSEEHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERVRIAYEKKCKQLRNFDLRGEDPSCADKARAAIRDLDTQITVSIHSVEAISRRIETLRDEELYPQLLELVQGLEKMWKVMAECHQKQKRTLDEAKILLAGTYSKLHARKQSSMLMIDPNRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDASKLPCSPRRSSGTHPLFGLCVQWSRRLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGPKQNNGNMELVEAGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSADGYNEVVKQWDNVKCQNTTSSNNTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ10</accession>
    <name>V7AZ10_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G161000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ10"/>
    <dbReference type="SMR" id="V7AZ10"/>
    <dbReference type="STRING" id="3885.V7AZ10"/>
    <dbReference type="Gramene" id="ESW09843">
        <property type="protein sequence ID" value="ESW09843"/>
        <property type="gene ID" value="PHAVU_009G161000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZR5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQIEPKN"/>
    <dbReference type="OrthoDB" id="1925932at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF489">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF113-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="82"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="216"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="22"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="78"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="154"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="216"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="238"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="28835" checksum="BDF950726E368418" modified="2014-02-19" version="1">MERRSHSTEREEEHDLFPIYSERSQQDMSAMVSALTQVMGGSNDSLQHHEHLLTSSNNTSSQNNNEQSQVPQQDQGSGRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDAAALKFKGSKAKLNFSERVQGTDEFGYLTNQPLSSTTTSNDQASNPVAPHFTQETYSPTHYYHPQQIMGTAGSSSFNNQDMLRFFGGDMFVSSQPAASSSSSTSLSQQQEEFLRFSTQFGGSSSEPPRNWRGDGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZD2</accession>
    <name>V7AZD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G140100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZD2"/>
    <dbReference type="SMR" id="V7AZD2"/>
    <dbReference type="STRING" id="3885.V7AZD2"/>
    <dbReference type="Gramene" id="ESW09596">
        <property type="protein sequence ID" value="ESW09596"/>
        <property type="gene ID" value="PHAVU_009G140100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2242">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4692">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LCCFHRL"/>
    <dbReference type="OrthoDB" id="258495at2759"/>
    <dbReference type="PhylomeDB" id="V7AZD2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000151">
        <property type="term" value="C:ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034450">
        <property type="term" value="F:ubiquitin-ubiquitin ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16541">
        <property type="entry name" value="RING-HC_RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12882">
        <property type="entry name" value="SPRY_RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.920:FF:000053">
        <property type="entry name" value="E3 ubiquitin-protein ligase RKP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000133">
        <property type="entry name" value="E3 ubiquitin-protein ligase RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001870">
        <property type="entry name" value="B30.2/SPRY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043136">
        <property type="entry name" value="B30.2/SPRY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045737">
        <property type="entry name" value="RKP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045129">
        <property type="entry name" value="RNF123/RKP/RSPRY1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003877">
        <property type="entry name" value="SPRY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035773">
        <property type="entry name" value="SPRY_RNF123"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057987">
        <property type="entry name" value="TPR_RNF123/RKP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019474">
        <property type="entry name" value="Ub_conjug_fac_E4_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13363:SF5">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13363">
        <property type="entry name" value="RING FINGER AND SRY DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19322">
        <property type="entry name" value="RKP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00622">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25576">
        <property type="entry name" value="TPR_RNF123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10408">
        <property type="entry name" value="Ufd2P_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00449">
        <property type="entry name" value="SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50188">
        <property type="entry name" value="B302_SPRY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B30.2/SPRY" evidence="11">
        <location>
            <begin position="79"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="1222"/>
            <end position="1256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="705"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="709"/>
            <end position="724"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW09596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1270" mass="144025" checksum="10BA8B13009227DC" modified="2014-02-19" version="1">MGEDSPRVGGFSAGLAVLLNGEDGKKNLPKTRLLSCCDDLGQQSVERTLEYVFGLPNRSLNSLTGPVDRGCIHSVIRNDFSRYNVKLRDSYSERDGVCYINGKNGNGPDIIGLEESSICGDIKVIKSPFLIESMAMFSSARASACVWKGKWMYEVMLETSGIQQLGWATLSCPFTDHKGVGDADDSYAYDGRRVSKWNKDAETYGQSWVVGDIIGCCIDLDQDEILFYRNGNSLGVAFQGIRKMGPGFGYYPAVSLSQGERCELNFGARPFKYPIEGYLPLQAPPSKNYFVTQLLQCWSRLLDMHSVERADHSLVQKLRRVKRFDSLEEIFHPASYAICEELFSILEADVGITEYMVWGPLLSFMFEVFGLHAPHDYSSLDKVVEVMLQFQGSHVLFEHILNALSCGCKIALLILTECPYSGSYSHLALACHLLRREELMVLWWKSPDFEFVFEGFLSQKSPNKHDLDFMIPTVWWPGSCEDASYEGNMMLTTTALSESVSKIEEKHRDLCRLVIQFIPPTNPPQLPGAVFRTFLRSLLLKNRGAERNIPPPGVSSNSVLVSIYTVVLHFLSEGFALGDICGWLKSCKTDVGFLHRGGEQSFPVHLFLKSDPHRADISRLGGSYSHLSKLHPTFDHEMEVIQWDEGCMDSEETRVTHSTRQKPCCCSSYDSDFTRNFKVPAKYLAKGSRGHCSSIPERPAHVTAECSDGSLNNEITDKPSPSDQSEPEYGYRQVHHMKSVPKDINISSTTLREEELLDTLLWLYHVGLAPNFKQASYYMTHQTQSISLLEETDKQIRERACSEQLKHLKEARNEYREEVIDCVRHCAWYRISLFSRWKQRGMYAMCMWVVQLLLVLSNMDSVFIYIPEYYLEALVDCFHVLRKSDPPFVPSTIFIKRGLTSFVTFVVTHFNDPRISSADLRDLLLQSISVLVQYREYLATFENNEAATQRMPKALLSAFDNRSWIPVTNILLRLCKGSGFSFSKNGESSSSSVLFQRLLREACISDEGLFSSFLNRLFNTLSWTMTEFSVSVREMQEKYQVIEFQQRKCCVIFDLSCNLARILEFCTREIPQVFLSGPDTNLRRLTELVVFILNHITSAADAEFFDLSLRRHSQSPEKINRGMILAPLVGIILNLLDATNSEEYRENNDLLDVFASMDCPDTVQYGFQYLLDYNWDGSFRGEAYVAKYEQLENFLSLLTCRTVLPHDKVDSVGDTDLDDSLCCICYACEADAQIAPCSHKSCYGCITRHLLNCQRCFFCNATVTSVSKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZS7</accession>
    <name>V7AZS7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">LITAF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G000500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDIP1/LITAF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZS7"/>
    <dbReference type="STRING" id="3885.V7AZS7"/>
    <dbReference type="Gramene" id="ESW11084">
        <property type="protein sequence ID" value="ESW11084"/>
        <property type="gene ID" value="PHAVU_008G000500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0H7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIQESFA"/>
    <dbReference type="OrthoDB" id="1882956at2759"/>
    <dbReference type="PhylomeDB" id="V7AZS7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006629">
        <property type="entry name" value="LITAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037519">
        <property type="entry name" value="LITAF_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23292:SF6">
        <property type="entry name" value="FI16602P1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23292">
        <property type="entry name" value="LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10601">
        <property type="entry name" value="zf-LITAF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00714">
        <property type="entry name" value="LITAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51837">
        <property type="entry name" value="LITAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="LITAF" evidence="7">
        <location>
            <begin position="34"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW11084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="14957" checksum="1CF9EF36B158D3AE" modified="2014-02-19" version="1">MEKKDEVVVGVPVYDGGENQYQRGVIPPNAVVGDPKGIPIYQTIYRDTPAPFNCPYCGTTALTTVRSKLSLAAFVGCLMPMMVGVCFLCPSMDCLWHKYHYCPKCQEKVADFEKSDPCVVMDPPHWTQESFALSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B171</accession>
    <name>V7B171_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">TCP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G188100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B171"/>
    <dbReference type="SMR" id="V7B171"/>
    <dbReference type="STRING" id="3885.V7B171"/>
    <dbReference type="Gramene" id="ESW10186">
        <property type="protein sequence ID" value="ESW10186"/>
        <property type="gene ID" value="PHAVU_009G188100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU5R">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PYRTVIG"/>
    <dbReference type="OrthoDB" id="1426352at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017887">
        <property type="entry name" value="TF_TCP_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005333">
        <property type="entry name" value="Transcription_factor_TCP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31072:SF218">
        <property type="entry name" value="TRANSCRIPTION FACTOR TCP11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31072">
        <property type="entry name" value="TRANSCRIPTION FACTOR TCP4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03634">
        <property type="entry name" value="TCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51369">
        <property type="entry name" value="TCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TCP" evidence="7">
        <location>
            <begin position="88"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="212"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="9"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="37"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="87"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="371"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="385" mass="42151" checksum="4087816B03F40B64" modified="2014-02-19" version="1">MEGGDDFHHHHHHHHHHHQHRQDFPFQLLEKKEDQDPSSCSTSSPYPSLAISAEPSTSNSTPSNNNTALIPTQSESSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISHRSSGSSISVPSQLRSNYFNSNFSLQPRRSLFLENTNTSTTLLNFQSNNPISTSMFQPKHELRDSSSLDLSSENNEEGLGRKRRPLEQDLSSTMQHQVGSYLMQSSSSGTIPESHAQIPANIWMVANSNSQGVSGEAPLWTFPGVSNSALYRGNMSSGLHFMNFPTPMALLPGQQLGSSGIGGNINEGHLSMLSGLNPYRTVIGVSESQASESHSHHGGSEDRHDDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B301</accession>
    <name>V7B301_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G098300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B301"/>
    <dbReference type="SMR" id="V7B301"/>
    <dbReference type="STRING" id="3885.V7B301"/>
    <dbReference type="Gramene" id="ESW12267">
        <property type="protein sequence ID" value="ESW12267"/>
        <property type="gene ID" value="PHAVU_008G098300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHPHNIT"/>
    <dbReference type="OrthoDB" id="691673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd12203">
        <property type="entry name" value="GT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000032">
        <property type="entry name" value="Zinc finger and SCAN domain-containing 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654">
        <property type="entry name" value="FI21293P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654:SF66">
        <property type="entry name" value="TRIHELIX TRANSCRIPTION FACTOR GT-3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="48"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="147"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="157"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="285" mass="34432" checksum="E6E3249D63A053AA" modified="2014-02-19" version="1">MEGHHLHHHHHHRQQQHQQQHQQQQQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCEAIETEAMRQQFPFYNELQGIFTSRMQRMLWAEAEGGSKKKGVQLSSEDEEEGNEESEGDQKGSMMKKKKKGKMVIGGGSSSNMESLKEIMEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQRWREREDQRRIREEVRADKRDALITALLNKLRREEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4A8</accession>
    <name>V7B4A8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Chromatin assembly factor 1 subunit FAS1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G051800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4A8"/>
    <dbReference type="STRING" id="3885.V7B4A8"/>
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        <property type="protein sequence ID" value="ESW11693"/>
        <property type="gene ID" value="PHAVU_008G051800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4364">
        <property type="taxonomic scope" value="Eukaryota"/>
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    <dbReference type="OrthoDB" id="440676at2759"/>
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        <property type="component" value="Chromosome 8"/>
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    <dbReference type="GO" id="GO:0033186">
        <property type="term" value="C:CAF-1 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031507">
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006334">
        <property type="term" value="P:nucleosome assembly"/>
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="project" value="EnsemblPlants"/>
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        <property type="term" value="P:positive regulation of cell cycle"/>
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        <property type="project" value="EnsemblPlants"/>
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    </dbReference>
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        <property type="term" value="P:trichome differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048800">
        <property type="entry name" value="Cac1-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022043">
        <property type="entry name" value="CAF1A_DD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15272:SF0">
        <property type="entry name" value="CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15272">
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="CAF1A_dimeriz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Chromatin assembly factor 1 subunit A dimerization" evidence="7">
        <location>
            <begin position="591"/>
            <end position="657"/>
        </location>
    </feature>
    <feature type="domain" description="Chromatin assembly factor 1 subunit Cac1-like C-terminal" evidence="8">
        <location>
            <begin position="814"/>
            <end position="861"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="101"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="364"/>
            <end position="437"/>
        </location>
    </feature>
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        <location>
            <begin position="450"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="613"/>
            <end position="669"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="897"/>
            <end position="932"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="122"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="364"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="382"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="412"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="458"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="629"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="910"/>
            <end position="921"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF21796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="932" mass="105457" checksum="D89ED8FD1D43A057" modified="2014-02-19" version="1">MERNQSSLARKQIPYPFFVFIFSTFSFLPQNQFFITIILVYICPTFFFIYSPTHYITINRVKFNCFYHRSHRFRIRCQNSKQVLGKVLEVEMAAPTGAMAGNAEHVSTPPRSLPQDPKSNRAKTTTTPRSRKSLLQNLKSAEEKQAYLETLGNELQALFRYYKDAMAEKVRIELSQCGGSRNAVVSALLEESDLPLSKLVDEIHDRLNGEVGSGAIVLAEPVTYATVKSSVLFAGQRVTYGVPNADADVLEDYAESCLWCWETRDLKLMPKSVRGQLGVRRMCRKKIHERIIAVSEMISALKKLESEPNYNDALKRASTKLNKAFPEADIRLLVESSLQKNCEDMDKKRANQESKLLIKQLERNRREAEKEKASMHNELQRETQPNESDLQLSQGQAKNDEKCPVKRQQQKKQVEETKRDQRRREKAEAELKKKRSLEKQASIMERFLKKCKTNSSSENDKASTKSTDDLSSSKNESLYESATLSMDCTLASSSDVTLEDIRKSHFSSWRSLRQSIRSNRKQNWGLRQKPRTEAFKELKLTAIKTDIHDDELDMEKHVDRLGEDSSDISSCAVNADSSLHDSKKYHRARQLYQFDKSHRPAFYGVWPTKSHIVGPRHPLRKDPSLDYDVSSDEEWEEEEPGESLSDCDKDEEECQEECSKSDEESEDGFFVPDGYLSADEGAAQVDMEIDDEIEGNDSSSSYKNNVESVEFCALLRQQKYLNSLTEHALRKNQPLIISNLFHDKECLSNHNISGISKLEQTCLQALSMYVIPGGSLVEIPIAKMQDEEQKVRPSIGKGGASASSGIAAIPDSDLPIIVTTIQSCSQGMNKVLVSLQHKFPSVPKSWMKNKVREVSDYVDNRLQVKKEVLDKLGLAVTPEKSSEGPKSIAAFFSKRCLPPGRESVKPGETSPLPSLKSSSAAIDERPQSSYNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4S1</accession>
    <name>V7B4S1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G1509000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Secreted</location>
            <location evidence="1 9">Extracellular space</location>
            <location evidence="1 9">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4S1"/>
    <dbReference type="Gramene" id="ESW12897">
        <property type="protein sequence ID" value="ESW12897"/>
        <property type="gene ID" value="PHAVU_008G1509000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ4A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLGVITI"/>
    <dbReference type="OrthoDB" id="1335588at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000333">
        <property type="entry name" value="Germin-like protein subfamily 3 member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 8 9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Cupin type-1" evidence="10">
        <location>
            <begin position="2"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="23"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW12897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="9628" checksum="A9011959B31820FB" modified="2014-02-19" version="1" fragment="single">GNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGTITIANALFKSDPPISPEVLTKAFQVDKSTIDYLQKQSWYDNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5U6</accession>
    <name>V7B5U6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G063400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5U6"/>
    <dbReference type="SMR" id="V7B5U6"/>
    <dbReference type="Gramene" id="ESW11846">
        <property type="protein sequence ID" value="ESW11846"/>
        <property type="gene ID" value="PHAVU_008G063400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7CQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHFVWEN"/>
    <dbReference type="OrthoDB" id="1430548at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="116" mass="14104" checksum="6835BDE996DAC0B8" modified="2014-02-19" version="1">MVTLAWGSTHVFITNHLEGREDLNLHCKSKDDDLGQHVLHYNQYFKITFGPNYFLQTLFFCSFQWGNGPFLYYNVYDQSKDLFKCAHDCRWYVHKDGLCRYEEDSRYIRKCYPWKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B721</accession>
    <name>V7B721_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Peroxisomal and mitochondrial division factor 2-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G191300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B721"/>
    <dbReference type="SMR" id="V7B721"/>
    <dbReference type="STRING" id="3885.V7B721"/>
    <dbReference type="Gramene" id="ESW13385">
        <property type="protein sequence ID" value="ESW13385"/>
        <property type="gene ID" value="PHAVU_008G191300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY0Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FYDADQT"/>
    <dbReference type="OrthoDB" id="1433127at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW13385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="303" mass="34096" checksum="8D76D4D8A505EB33" modified="2014-02-19" version="1">MADDGVANGGVDEQYGEESTTKIAVLQRERDELLNENAARKEEIEELTAELDGLRKDRAVNNQKIEEMQRELVQSREGAKAAEVIAARAADLETDLARLQHDMISEMSAAEEARADAAELRKALGEKESRVESLERKIGVLETKEIEERNKRIRFEEEMRDKIDEKEKEIKAFKQKFEELEKIAGEKKSELEKIVAQKNSELEESVKQKLKLEELLTESGKKVTVLESSIVQLREEAKEAEKVILSLKEKASETIKKIDRGVKGIDGEEKVLKLQWPVVAAAGSTGAVVAAAAVFYVCYGRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7L9</accession>
    <name>V7B7L9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AMP-dependent synthetase/ligase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G115400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7L9"/>
    <dbReference type="SMR" id="V7B7L9"/>
    <dbReference type="STRING" id="3885.V7B7L9"/>
    <dbReference type="Gramene" id="ESW12466">
        <property type="protein sequence ID" value="ESW12466"/>
        <property type="gene ID" value="PHAVU_008G115400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1256">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QSCIVAI"/>
    <dbReference type="OrthoDB" id="1700726at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010143">
        <property type="term" value="P:cutin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010025">
        <property type="term" value="P:wax biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272:SF4">
        <property type="entry name" value="LONG CHAIN ACYL-COA SYNTHETASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="113" mass="13528" checksum="FB3D1EE7718FFBA0" modified="2014-02-19" version="1">MDKKNFFQIWVYGNNFESLLMAVVVPQRKAIADWSLVHNVSDDFKSLCDNLKARKYILDELNNTGQKHQVRGFEFLKVIHLELNPFDMERDLITPTFKLKRPQLFKYYKVIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9B9</accession>
    <name>V7B9B9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific lipid-transfer protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G198500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9B9"/>
    <dbReference type="SMR" id="V7B9B9"/>
    <dbReference type="STRING" id="3885.V7B9B9"/>
    <dbReference type="Gramene" id="ESW13463">
        <property type="protein sequence ID" value="ESW13463"/>
        <property type="gene ID" value="PHAVU_008G198500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAI7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CECFKEE"/>
    <dbReference type="OrthoDB" id="1403824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01960">
        <property type="entry name" value="nsLTP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00234">
        <property type="entry name" value="Tryp_alpha_amyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00382">
        <property type="entry name" value="LIPIDTRNSFER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00597">
        <property type="entry name" value="PLANT_LTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756437" description="Non-specific lipid-transfer protein" evidence="4">
        <location>
            <begin position="22"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="5">
        <location>
            <begin position="30"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="121" mass="13231" checksum="3C2A761241196FA8" modified="2014-02-19" version="1">MKSVYVPFLSLVAVLVLTVAATEPPKALTCEETKSLVTPCLDFLTDKTNTPPTPCCQGLNKLIVSTPTKEEKLTACKCLKEAASQIPNFDVSRVNNLPKVCNINVNYPISKDFDCDNIIKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAE1</accession>
    <name>V7BAE1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_008G195900g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="14">Nucleus</location>
            <location evidence="14">Nuclear body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the plant 'ANKYRIN-BTB/POZ' family. 'NPR1-like' subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAE1"/>
    <dbReference type="SMR" id="V7BAE1"/>
    <dbReference type="STRING" id="3885.V7BAE1"/>
    <dbReference type="Gramene" id="ESW13436">
        <property type="protein sequence ID" value="ESW13436"/>
        <property type="gene ID" value="PHAVU_008G195900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFFHEKF"/>
    <dbReference type="OrthoDB" id="71307at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016604">
        <property type="term" value="C:nuclear body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009877">
        <property type="term" value="P:nodulation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000022">
        <property type="term" value="P:regulation of jasmonic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000031">
        <property type="term" value="P:regulation of salicylic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009862">
        <property type="term" value="P:systemic acquired resistance, salicylic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18310">
        <property type="entry name" value="BTB_POZ_NPR_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.20:FF:000239">
        <property type="entry name" value="BTB/POZ domain and ankyrin repeat-containing protein NPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.710.10:FF:000110">
        <property type="entry name" value="Regulatory protein NPR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044292">
        <property type="entry name" value="NPR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021094">
        <property type="entry name" value="NPR1/NIM1-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46475">
        <property type="entry name" value="REGULATORY PROTEIN NPR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46475:SF7">
        <property type="entry name" value="REGULATORY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00651">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12313">
        <property type="entry name" value="NPR1_like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00225">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0536">Nodulation</keyword>
    <keyword evidence="13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-0611">Plant defense</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <keyword evidence="8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BTB" evidence="18">
        <location>
            <begin position="63"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="16">
        <location>
            <begin position="329"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="555"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="17">
        <location>
            <begin position="566"/>
            <end position="575"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00034306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00044947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW13436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="588" mass="65934" checksum="333945DACE1CCD51" modified="2014-02-19" version="1">MDNSNDSSSSLTFVSSQLSHGSSNHNVSSFTSNEHGANIEILTLNKLSGSLEKLLIDAEYDYSDAEIVVEDISVGVHRCILASRSPFFHELFKKGTDGSGKEGKPRYLMSELVPYGAVGYEAFQVFLYYLYTGRLKDSPTEVTTCVGETCIHDACRPAIDYALELMYASAAFLMKELVLLFQRQLLNFVDKALVEDVIPILMAAFNCQLEQLLSRCIHKVASSDFDSISLEKELPHEVVTEIKSCRLSFQPESAADAMEVEPLSEKSIMRIHKALDSDDVELLKLLLNESRVTLDDAYALHYACAYSDSKVIQELLGLGMADILRRNSRGYTVLHVAARRKDPSILVALLNKGACATDTTPDGQTALSICQRLTRRKDYHEKTVKCKESNKDRLCVDVLEREMRRSSMTVSMSVSSQLTADDLHIRLDYLENRVTFARLLYPAEAKVAIENAEADSSSLHANASALEGANGNLKVDLNESPSARTRKLQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDMPDVFFLEKGSEEEQRMKKARFMELKDDVQKAFHKDMAENNHTAFSSSVSSSSSSTRRESLNHRVRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAF4</accession>
    <name>V7BAF4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Mitochondrial glycoprotein family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G230400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAF4"/>
    <dbReference type="SMR" id="V7BAF4"/>
    <dbReference type="STRING" id="3885.V7BAF4"/>
    <dbReference type="Gramene" id="ESW13838">
        <property type="protein sequence ID" value="ESW13838"/>
        <property type="gene ID" value="PHAVU_008G230400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2536">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWLNNVK"/>
    <dbReference type="OrthoDB" id="278212at2759"/>
    <dbReference type="PhylomeDB" id="V7BAF4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.280.10:FF:000002">
        <property type="entry name" value="Mitochondrial glycoprotein family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.280.10">
        <property type="entry name" value="Mitochondrial glycoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003428">
        <property type="entry name" value="MAM33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036561">
        <property type="entry name" value="MAM33_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10826">
        <property type="entry name" value="COMPLEMENT COMPONENT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10826:SF41">
        <property type="entry name" value="MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02330">
        <property type="entry name" value="MAM33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54529">
        <property type="entry name" value="Mitochondrial glycoprotein MAM33-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="251" mass="28501" checksum="3668FDD9D253282D" modified="2014-02-19" version="1">MAFNSILRKSGSFVRALAVAGQLTKNNHLGHRTLIFTAINHQKDSFVPKFHFSSVAAQKKPTSDENLLRVIESEIECAQETDDHNEVEGVPSNFPFKIVDSPGQQTITLERTYQEEEIKVEVHMPDLVTGEGNNEDDDNESERASQSSIPLSISVYKKGGPYLEFNCVGYPDEIIIDSLSVKNPDLTEDQIAYEGPDFQDLDENLQKSFHRYLEIRGIKPSTTNFLHEYMINKDSKEYLVWLNKLKSFVQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDM1</accession>
    <name>V7BDM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_007G114200g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDM1"/>
    <dbReference type="SMR" id="V7BDM1"/>
    <dbReference type="STRING" id="3885.V7BDM1"/>
    <dbReference type="Gramene" id="ESW15922">
        <property type="protein sequence ID" value="ESW15922"/>
        <property type="gene ID" value="PHAVU_007G114200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSBQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHINALT"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF48">
        <property type="entry name" value="PEROXIDASE 16-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
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            <begin position="12"/>
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        <ligand>
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        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
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        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:29108"/>
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        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:29108"/>
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        </location>
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    </evidence>
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    </evidence>
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        </source>
    </evidence>
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    </evidence>
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        <source>
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        </source>
    </evidence>
    <sequence length="326" mass="36192" checksum="AD889DA0BEA30F6D" modified="2014-02-19" version="1">MLYKSCVRPSKVVMANFVTVLLLIEVFAYGFRFGADGLNMNYYLMSCPFIEPVVKNTVNRALMEDPTLAAGLIRMHFHDCFIQGCDGSVLIDSTKDNTAEKDSPGNLSLRGFEVIDAIKEQLEIQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRSFAQRGFSAQEMVALSGAHTLGVASCGSFKNRLSQVDPTLDTEFGKTLGRTCSSGDNAKQPFDATSNDFDNVYFNALLRRNGVLTSDQTLYTSPRTRNFVNAYAFNQAMFFFDFQQAMVKMGLLDVKDYYNGEVRQNCRKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
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    <name>V7BDV6_PHAVU</name>
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    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
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                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
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                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
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                <person name="Wing R.A."/>
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</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
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            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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        <property type="project" value="InterPro"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
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    </dbReference>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="81" mass="9201" checksum="25F135A487DF0A62" modified="2014-02-19" version="1">MPFEPDESIWAALLEACKLHNQPSVTKLAALRALDMKPIRTGTYALISNIYATEDIWTNFASYKKLRRSTKNKNDSGKQLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
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    <name>V7BHK2_PHAVU</name>
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            <fullName evidence="14">Uncharacterized protein</fullName>
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    <organism evidence="14 15">
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        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7BHK2"/>
    <dbReference type="Gramene" id="ESW17378">
        <property type="protein sequence ID" value="ESW17378"/>
        <property type="gene ID" value="PHAVU_007G2346001g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17379">
        <property type="protein sequence ID" value="ESW17379"/>
        <property type="gene ID" value="PHAVU_007G2346001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPUA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTSENFT"/>
    <dbReference type="OrthoDB" id="68020at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000127">
        <property type="term" value="C:transcription factor TFIIIC complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042791">
        <property type="term" value="P:5S class rRNA transcription by RNA polymerase III"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006384">
        <property type="term" value="P:transcription initiation at RNA polymerase III promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16169">
        <property type="entry name" value="Tau138_eWH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000665">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056020">
        <property type="entry name" value="DUF7599"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056062">
        <property type="entry name" value="DUF7645"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056063">
        <property type="entry name" value="DUF7646"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056064">
        <property type="entry name" value="DUF7647"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056467">
        <property type="entry name" value="eWH_GTF3C1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044210">
        <property type="entry name" value="Tfc3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035625">
        <property type="entry name" value="Tfc3-like_eWH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007309">
        <property type="entry name" value="TFIIIC_Bblock-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056428">
        <property type="entry name" value="WH_GTF3C1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15180">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15180:SF1">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04182">
        <property type="entry name" value="B-block_TFIIIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24538">
        <property type="entry name" value="DUF7599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24655">
        <property type="entry name" value="DUF7645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24657">
        <property type="entry name" value="DUF7646"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24658">
        <property type="entry name" value="DUF7647"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24101">
        <property type="entry name" value="WHD_GTF3C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23704">
        <property type="entry name" value="WHD_GTF3C1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="General transcription factor 3C polypeptide 1 winged-helix" evidence="8">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="B-block binding subunit of TFIIIC" evidence="7">
        <location>
            <begin position="104"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7599" evidence="10">
        <location>
            <begin position="221"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7646" evidence="12">
        <location>
            <begin position="311"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="GTF3C1 extended winged-helix" evidence="9">
        <location>
            <begin position="505"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7647" evidence="13">
        <location>
            <begin position="698"/>
            <end position="873"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7645" evidence="11">
        <location>
            <begin position="874"/>
            <end position="932"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="934"/>
            <end position="957"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1192"/>
            <end position="1230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF24101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF24538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF24655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF24657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF24658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW17379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1306" mass="149103" checksum="3CC9AC6D7F4C1427" modified="2014-02-19" version="1" fragment="single">MDSVVNAAVEEICGGIEDGVTLAALWVKLEGSPSLSSANLHLNRTVKRAIWTNLLRIPGLRFEPRPSSSELEDAEKLNLKIFPQSSLIDNFAGLYESQSLQHAQKRVLHLLANARGNGITQTQLAKQLHIDANNFHYVLRSLECQGLVVKRSAIEKKKQISSLGESKNYPCVTTHLVYLRRYAKQLACHQRFEFEITKLNSPDDEEDDADGTTFQTDVQLKDYSPQMKAICDKLANANGKVLLVSDIKKDLGYCGSRQKQRAWRQISHRLKTDGIVQQFVAKVNGKTEPCLQLLDQITAGSGNEDRKLNSGKTCQVIDQLVELPIEHQIFDIIDAAGSCGITLKEICERLGIELKKSHIRLVNLCYRFRMKVMEEQCLKSKTIRVWTSKNFNLEPEVELICKLDENKILNHVPDSSKVISEFVASTASGELADHAKLKDIIVGAELSSVYPRNTESNFVENSIELQDLVVCSSVDADSAPSGAFPSDVLKPFSTGSYKRYANSSLSVDNTRRANRILERLKDERFILKPELNRWLNSFEKDKSRKVDRKTMLRILSVLQEQRLVKCITVHSPVISEYSRTKDYVVVVRPSTSQSPELFDEIQDTIRSFNNYIRRKSTSHQKNDKLIPVMEDIQKNQSVTVPDGQVSKAEAMRVNGFVLAKMIRAKLLHSYVWDCLHRSTGRVDALSSKICENELTDTPHSSSKLFSLEETIKEMPVELFLQVVGSTKKYEEMIEMCKMGLRLIDLPLEEYKCIMDGQATGRLSLIIDILRRLKLIRMVTDLQSRDGLKSPHTHTMELRPYIEEPISNDAVSLNFVSLDLRPRVRHDFTLSNRGAVDEYWKTLEYYYATADRKAASYAFPGSVVKELFRYRSWASTHVMTAEQRAELLKHVMKNNLSDKISYRDFEKIAKDLNLTMEQVLSMYSCKRRRHFVSQFKDEEKDDNSPEGMGDSSCRRKNKFTDLRPAKHARIDALTDVVDMHIEQSHNLDVQSGDCATDMEEFEESMPEDCTPLINQCVLKKMKPTRHRRFIWSDKTDRQLVIQYVKQRAVLGAECHRVDWSSISDLPTSPIACMRRMTLLNANLRFRKAVNKLCNILSERYAKHLQKSQNMSLNSDECKQFVRSQSYEGISNNSSPDVEIQTRSLNREAWDDFENKNIKTALEEILRHKIIAKLDASSQKGQLQYEGCSDASLNADGYESQENEESTSAIPCENVRSHSGKAHSLSSQRSRRRRLDKKFTRFLNNMANVYGQVNESLAISNAVELFKLVFLSTSTSPQPPNLLADILRRYSEHDLFAAFNYLREKKIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHK6</accession>
    <name>V7BHK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G116400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHK6"/>
    <dbReference type="STRING" id="3885.V7BHK6"/>
    <dbReference type="Gramene" id="ESW15946">
        <property type="protein sequence ID" value="ESW15946"/>
        <property type="gene ID" value="PHAVU_007G116400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0731">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLFHGWK"/>
    <dbReference type="OrthoDB" id="2016434at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001891">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FtsH 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF58">
        <property type="entry name" value="INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 5, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="3">
        <location>
            <begin position="782"/>
            <end position="922"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="212"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="346"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1200" mass="138025" checksum="5F8124BE0107AFF1" modified="2014-02-19" version="1">MDSIIASSPLQFPHRPLFTSVRPIPIRTFIANHRRTPRTPLSLAPITLTPPFTSAAKSTTLAPSPSDDVFLKHFVRALFCFAVGFSALGAFRAPPPALAIAVPWSLLGKIGAEKEKEKAKSHQYSDCTDKLLETVSFLLGAVDEARKGNGDASEVEAALKAVKSKKQEMRKEIDGRLYPALKKLRNEKKALWKRSGEILRAILKATAEYDGLKAKAVANEKEKVRMKELEETVGEMENEYNGVWERVGEIEDQISREETLALSYGVREINFIERECEQLVERLKQEIRRKDFESLPTGSVTRLSKSVIQKDLETVHRKYAEQIILPSILDVEDLGPFFHQDSINFAHRLKRVLKDSREKQRNLEAQIRKKMKKFGKEKRSIIYSPDEDVVKGFPEVELKWMFGNKEVVLPKAVGLHLYHGWKKWREEAKANLKQNLIKDAEFCRQYVAERQERILLDRDRVVSRTWYNEGKKRWEMDPVAVPYAVSKKLIEYVRIRHDWGAMYIVLKGEDKEFYVDIKEFEMLFEDLGGFDELYMKMLACGIPTAVHLMWIPFSELNIRQQFLLVLRVSHGICSGLWNSRVVTYAKNWIFTQIKDTTDDIMVVMGFPIVEFLVPYPVRIQLGMAWPEEIYQTVDTTWYLKWQSEAESNFKSRQSADEDEETSWSFWFLVRAAIYGFVLFHVIKFMRRRLPSLLGFGPLRRDPNRQKLRRVKYYISQKLKKIKQRRKDGIDPIKTAFEQMKRVKKPPIPLKNFASVESMKEEINEVVAFLQNPSAFQEMGAQAPRGVLIVGERGTGKTSLALAIAAEAKVPVVEIKAQQLEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGTYIHTKNQDHETFINQLLVELDGFEKQDGVVLMATTRNLKQIDEALQRPGRMDRIFHLQRPTQAEREKILYLAAKETMDNQLIDYVDWKKVAEKTALLRPIELKIVPMALEGSAFRSKVLDTDELMGYCGFFATFSSMIPSWLRKTKSFNKFSKAMVNHLGLTLRKEDLQNVVDLMEPYSQISNGIELLSPPLDWTRETKFPHAVWAAGRGLTALLLPNFDVVDNLWLEPLSWQGIGCTKITKARNEGSINGNSESRSYIEKKLVFCFGSYVASQMLLPFGEENLLSISEIQQAQEIATRMVIQYGWGPDDSPAIYYRSNAVYRPHVHFNYLFFFLMLIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIJ3</accession>
    <name>V7BIJ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SMP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G184800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LEA type SMP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIJ3"/>
    <dbReference type="STRING" id="3885.V7BIJ3"/>
    <dbReference type="Gramene" id="ESW16788">
        <property type="protein sequence ID" value="ESW16788"/>
        <property type="gene ID" value="PHAVU_007G184800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R41N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VVGQYSQ"/>
    <dbReference type="OrthoDB" id="2014755at2759"/>
    <dbReference type="PhylomeDB" id="V7BIJ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042971">
        <property type="entry name" value="LEA_SMP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007011">
        <property type="entry name" value="LEA_SMP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31174:SF34">
        <property type="entry name" value="LATE EMBRYOGENESIS ABUNDANT PROTEIN 47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31174">
        <property type="entry name" value="SEED MATURATION FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04927">
        <property type="entry name" value="SMP"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="SMP" evidence="4">
        <location>
            <begin position="16"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="SMP" evidence="4">
        <location>
            <begin position="156"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="SMP" evidence="4">
        <location>
            <begin position="221"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="54"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="229"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="57"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="90"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="235"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW16788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="281" mass="28992" checksum="52D857441CF73690" modified="2014-02-19" version="1">MSQEQPRKEDRQEEAIKYGDVLDVQGDLRSKPVAPVDAAIMQKAESQMFGKTEKGGAAAAMQSAAAKNERDGVVGHNDMSNAAAGGGASVTETGTPGRQVTSESVGDQVGQKSVEEKEKKVNKLVEVVEQFSKKAPVNSMTSPSLVQDMGDGSGGITIGEALEATVLTAGKKPVEWSDAAAIQAAEVRATGRTNIVPGGVAAAAQSAATLNARVTKEEDKTKLADILADATSKLPSDRPATRRDAEGVTGAEMRNDPNLTTHPGGVSASVAAAARINQTNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJE1</accession>
    <name>V7BJE1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Auxin-induced protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G176700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimers and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Aux/IAA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJE1"/>
    <dbReference type="SMR" id="V7BJE1"/>
    <dbReference type="STRING" id="3885.V7BJE1"/>
    <dbReference type="Gramene" id="ESW16681">
        <property type="protein sequence ID" value="ESW16681"/>
        <property type="gene ID" value="PHAVU_007G176700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU81">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMYTERE"/>
    <dbReference type="OrthoDB" id="1926344at2759"/>
    <dbReference type="PhylomeDB" id="V7BJE1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000078">
        <property type="entry name" value="Auxin-responsive protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033389">
        <property type="entry name" value="AUX/IAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003311">
        <property type="entry name" value="AUX_IAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734:SF8">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02309">
        <property type="entry name" value="AUX_IAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PB1" evidence="12">
        <location>
            <begin position="100"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="22"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW16681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="196" mass="22104" checksum="875DE8F17A753FE3" modified="2014-02-19" version="1">MENSLGSYEKELNLEATELRLGLPGTDEPEKRAIAARTNKRSSPEASEEECISNVSDVTSDHQDNVVPPAKAQVVGWPPIRSYRKNSLQQKKEEQSEGNGMYVKVSMAGAPYLRKIDLRVYQSYPQLLKALENMFKCIFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWHMFVSSCKRLRIMKGSEAQGLGCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJE2</accession>
    <name>V7BJE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G214300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJE2"/>
    <dbReference type="STRING" id="3885.V7BJE2"/>
    <dbReference type="Gramene" id="ESW17143">
        <property type="protein sequence ID" value="ESW17143"/>
        <property type="gene ID" value="PHAVU_007G214300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1GC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPEANYG"/>
    <dbReference type="OrthoDB" id="551672at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd14702">
        <property type="entry name" value="bZIP_plant_GBF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000020">
        <property type="entry name" value="BZIP transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045314">
        <property type="entry name" value="bZIP_plant_GBF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45764">
        <property type="entry name" value="BZIP TRANSCRIPTION FACTOR 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45764:SF34">
        <property type="entry name" value="BZIP TRANSCRIPTION FACTOR 53"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="7">
        <location>
            <begin position="21"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="16662" checksum="3DD03FCFF8533798" modified="2014-02-19" version="1">MASIQRPASSGSSEGGDPAVNERKRKRMESNRESARRSRMRKQKQLETLTEEASRLQSENAALAQSIKAKKEAYVEMEAGNDIIRAQTMELADRLRFLNSILEIAEAAGDLSVEIPQIPDHLFNPWQIPHPMMASPDMFLHGIQGLFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJX5</accession>
    <name>V7BJX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DEAD-box ATP-dependent RNA helicase 53-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G028900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJX5"/>
    <dbReference type="SMR" id="V7BJX5"/>
    <dbReference type="STRING" id="3885.V7BJX5"/>
    <dbReference type="Gramene" id="ESW18294">
        <property type="protein sequence ID" value="ESW18294"/>
        <property type="gene ID" value="PHAVU_006G028900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GLDTICV"/>
    <dbReference type="OrthoDB" id="4255at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00268">
        <property type="entry name" value="DEADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001060">
        <property type="entry name" value="ATP-dependent RNA helicase RhlE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044742">
        <property type="entry name" value="DEAD/DEAH_RhlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050079">
        <property type="entry name" value="DEAD_box_RNA_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE RHLE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47959:SF23">
        <property type="entry name" value="HELICASE ATP-BINDING DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="122"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="325"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="482"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="526"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="6">
        <location>
            <begin position="494"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="546"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="6">
        <location>
            <begin position="559"/>
            <end position="568"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW18294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="577" mass="62005" checksum="2E7A7756BCB2F808" modified="2014-02-19" version="1">MTSVILRRSSSVISRRFFATLASIQPLPRHRGLAVLRHGGSSDGVGVRSLHSKSGPLNFRSSPVSRGAQLAVERDYSNEEVGSGTNCDEGLEIAKLGISREIVDALAKKGIAKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDRIIQLNAKHGRGKDPLAMVLAPTRELARQVEKEFNEAAPNLDTICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRRALNLKDVKFVVLDEADQMLQVGFQEAVEKILENLSPNRQTLMFSATMPPWIKTITRNYLNNPLTIDLVGDSDQKLADGISLYSIVSDMRTKAGILVPLITEHANGGKCIVFTQTKRDADRLSHVMAKSLKCEALHGDISQTQRERTLAGFRNNDFNVLVATDVASRGLDVPNVDLVIHYELPSSSEIFVHRSGRTGRAGKKGAAILIYSEDQFRTVKTIERDVGCKFTELAKINVQSGSVDMFGGWSGGRFGSSGGMRDRQSGGTGFGRSPGFGRSGSYTNSGFGGSSYGNSSSGSYTNSGFGRSSHGETGSFGGPSSSRFGSPGSNRSGGGFGGFGSSDRYGGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLF3</accession>
    <name>V7BLF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Nucleolar protein 14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G274500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in nucleolar processing of pre-18S ribosomal RNA. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NOP14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLF3"/>
    <dbReference type="STRING" id="3885.V7BLF3"/>
    <dbReference type="Gramene" id="ESW17858">
        <property type="protein sequence ID" value="ESW17858"/>
        <property type="gene ID" value="PHAVU_007G274500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2147">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSCWPSL"/>
    <dbReference type="OrthoDB" id="441771at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030692">
        <property type="term" value="C:Noc4p-Nop14p complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030490">
        <property type="term" value="P:maturation of SSU-rRNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007276">
        <property type="entry name" value="Nop14"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23183">
        <property type="entry name" value="NOP14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23183:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04147">
        <property type="entry name" value="Nop14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="265"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="197"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="272"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="305"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="351"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="383"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="396"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="422"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="437"/>
            <end position="469"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="955" mass="109512" checksum="556975D2E05FB3D1" modified="2014-02-19" version="1">MAKSSKRSSNGNSTDSNKKKKKSKKSGPEGVAMKVKAKSNKSNGGGGGGSNPFESIWSRRKFEVLGQKRKGEARRMGLARTLAIQKRNNTLLKEYQQSAKSSLFVDRRIGENDHALDEFGKAILRSQRERQLNMKLSKKSKYHLSDGEEDDFEGIDSLGRDDFEEEMLPDDVDAETHEEIDLVQRRMQIPGENVVDGEEHRHKSKKEVMEEIILKSKFYKAQKARDKEENEHLVEELDKDFTSLVHSEALLSLTEPNKMKALKALVNSNEQSNKDHIPTSRKMENSVQEKPDDYDKLVKQMGLEMRARPSDRTKTPEEIAQEEKERLEQLEEERQKRMVAAEDSSDEDNSDSEKASEQKPRSLSGDDLGDSFSVNEQIMTKKGWVDEILERKDEDSASEDDDGEDSDDLESSEDADEESDEGLEKHEKDLSLKDWEQSDDDDDIGADSEDGDEDDSDEDKQTDSEDLDGVEERLDAAVHIKAKRDDSVKNVKRDKDSSNEKKINVGVKQSKESDIPYIIEAPKTFEELCSLVDECSNSNIILIVNRIRKSNPITLAAENRKKMQVFYGILLQYFAVLANKKPLNIELLNLLVKPLIEMSTEIPYFAAICARRRIESTRKQFIESIKKSESSSWPSSKTLCLLRLWSMIFPCSDFRHPVMTPVILLMCEYLMRCPIVSGRDIAIGSFLCSMLLSVFRHSRKFCPEAIMFLQTSLLATTESKHISDEDSQLYHLMELKALKPILRIHETVNAISPLNFFKIIDLPEDSSFFTEVGFRASVLVTVVETLQGYVDVYKGLSSFPEIFLPILRILNEIEEQKNMPNSLRDKIKDVAEIIKLKVDELHTLRRPLQMRKQKPVPIKMLNPKFEENYVKGRDYDPDRERAELKKLKKQLKREAKGAARELRKDNYFLLDVKDKEKSLLEKDRAEKYGRAKAFLQDQEHAFKSGQLGKGKKRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLJ5</accession>
    <name>V7BLJ5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G0732000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLJ5"/>
    <dbReference type="Gramene" id="ESW18822">
        <property type="protein sequence ID" value="ESW18822"/>
        <property type="gene ID" value="PHAVU_006G0732000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47911">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47911:SF1">
        <property type="entry name" value="OS06G0664400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="26" mass="3038" checksum="F999E5B57A5F06C5" modified="2014-02-19" version="1" fragment="single">SNPGWGFDKKCHFMDKLVGEVSQHYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLW1</accession>
    <name>V7BLW1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FACT complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G0865002g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the FACT complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M24 family. SPT16 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLW1"/>
    <dbReference type="STRING" id="3885.V7BLW1"/>
    <dbReference type="Gramene" id="ESW18973">
        <property type="protein sequence ID" value="ESW18973"/>
        <property type="gene ID" value="PHAVU_006G0865002g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW18974">
        <property type="protein sequence ID" value="ESW18974"/>
        <property type="gene ID" value="PHAVU_006G0865002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1189">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10251642at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035101">
        <property type="term" value="C:FACT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031491">
        <property type="term" value="F:nucleosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006368">
        <property type="term" value="P:transcription elongation by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.150:FF:000004">
        <property type="entry name" value="FACT complex subunit SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.210:FF:000002">
        <property type="entry name" value="FACT complex subunit SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.210">
        <property type="entry name" value="FACT complex subunit Spt16p/Cdc68p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056595">
        <property type="entry name" value="Fact-SPT16_PH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013953">
        <property type="entry name" value="FACT_SPT16_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013719">
        <property type="entry name" value="RTT106/SPT16-like_middle_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040258">
        <property type="entry name" value="Spt16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980">
        <property type="entry name" value="CDC68 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13980:SF18">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24824">
        <property type="entry name" value="PH_SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08512">
        <property type="entry name" value="Rttp106-like_middle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08644">
        <property type="entry name" value="SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01286">
        <property type="entry name" value="SPT16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0158">Chromosome</keyword>
    <keyword evidence="1" id="KW-0227">DNA damage</keyword>
    <keyword evidence="1" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FACT complex subunit SPT16 middle" evidence="2">
        <location>
            <begin position="4"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU367052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW18974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="37206" checksum="326794513E4A74D0" modified="2014-02-19" version="1" fragment="single">EMMIQIDQKNEAVLLPINGSMVPFHVAFIRTVSSQQDTNRNCYVRIIFNVPGTPFSPHDANSMKFPGSIYLKEASFRSKDSRHISEVVQSIKTLRRQVVARESERAERATLVTQEKLQLANNRFKPIRLSDLWIRPAFGGRGRKIPGTLEAHVNGFRYSTTRQDERGDILFGNIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERDRKNKINVEFQTFVNRVNDLWGQAQFNGLELEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIETPFLVVTLGEIEIVNLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRG9</accession>
    <name>V7BRG9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">mitogen-activated protein kinase kinase kinase</fullName>
            <ecNumber evidence="2">2.7.11.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G220800g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.25" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRG9"/>
    <dbReference type="SMR" id="V7BRG9"/>
    <dbReference type="STRING" id="3885.V7BRG9"/>
    <dbReference type="Gramene" id="ESW20579">
        <property type="protein sequence ID" value="ESW20579"/>
        <property type="gene ID" value="PHAVU_006G220800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEYMAGG"/>
    <dbReference type="OrthoDB" id="275301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004709">
        <property type="term" value="F:MAP kinase kinase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd06606">
        <property type="entry name" value="STKc_MAPKKK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050538">
        <property type="entry name" value="MAP_kinase_kinase_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016">
        <property type="entry name" value="MAP KINASE KINASE KINASE SSK2-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016:SF51">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="15"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="341" mass="37097" checksum="1CF1128E193A5882" modified="2014-02-19" version="1">MCAIRQWVWPKPCKWVKGKLIGCGSFGTVHLAMNKSTGSLFVVKSSNSRAGREALDEEVKILNTLNSEHIVQYLGAEEEQGKLNVFMEYMAGGSLADVALKFGGSLDEEVVRVYTREILHGLNYLHLHGIAHCDLKCKNVLLGPPGNVKLADFGCARRVKDLVKSSGGTPLWMAPEVLRNESVDLSADIWSLGCTVIEMATGTPPWAHEVSNHIGAVLRIAHGDGIPQFPPHFSKEGLDFLSMCLQRDPSKRPTAEQLLSHPFVTSTPSQQQPAFSPASVLEVHNFKDSCDIGELESSVGDDFSFTDRFASHSDYSNGTPVCKAEDSALGSSGNWITVRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVU0</accession>
    <name>V7BVU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF868 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G126700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVU0"/>
    <dbReference type="STRING" id="3885.V7BVU0"/>
    <dbReference type="Gramene" id="ESW22094">
        <property type="protein sequence ID" value="ESW22094"/>
        <property type="gene ID" value="PHAVU_005G126700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVR2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TGDSHEI"/>
    <dbReference type="OrthoDB" id="678233at2759"/>
    <dbReference type="PhylomeDB" id="V7BVU0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008586">
        <property type="entry name" value="DUF868_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31972:SF79">
        <property type="entry name" value="DUF868 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31972">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05910">
        <property type="entry name" value="DUF868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW22094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="300" mass="33757" checksum="696D637752696B53" modified="2014-02-19" version="1">MNMADYISCFNENAVNVSQSSCSSYSKNACISPSVTPSTQNSVSSVYKTTLSNQKQVLITVTWCKSNSNQGLAISFGEENPLAPSFRLNTNSRFFRKKKGSKVLESEDSKVEVFWDLSKAKYETGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX20</accession>
    <name>V7BX20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_005G163500g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX20"/>
    <dbReference type="SMR" id="V7BX20"/>
    <dbReference type="Gramene" id="ESW22562">
        <property type="protein sequence ID" value="ESW22562"/>
        <property type="gene ID" value="PHAVU_005G163500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIRINGE"/>
    <dbReference type="OrthoDB" id="2017114at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000146">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase IOS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF202">
        <property type="entry name" value="SENESCENCE-INDUCED RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-0675">Receptor</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 20" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757170" description="non-specific serine/threonine protein kinase" evidence="20">
        <location>
            <begin position="22"/>
            <end position="880"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="500"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="571"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="598"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW22562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="880" mass="98324" checksum="B05768E6191C12E8" modified="2014-02-19" version="1">MGMSSIFVGALVLVILIQAKGQPGFISIDCGAEAGVNYTEPSLDINYVSDANFINTGVRGIITSEETSTHTQRQLWRLRSFPEGKRNCYKISVTRGSKYLVRTVFLYGNYDGRNMLPQFDLLLGANLWDTVTIKNASIDQSMEIIHVSSLDFIQICLVYTGNGTPFITAIELRTLNNDTYVTPGSLERYMRCDLGSNTVYRYGYDDYDRIWSTCDFKENWTQLSVSISDDSFVENEYKPEATIMSTAVTPANDNAPLVIRWEPEHETDEFSVYMHFTELQVLTTNQTRQFNMSGALFLQNYSPPYMRVFTIYSVSALSGKEIKFSLERTENSTLPPIMNAIEIYKVKQFHQSDTFQGDVDAITSIKSVYGVKRDWEGDPCAPAAYLWDGLNCSYQGIESPRITTLNLSSSGLHGKIAPSISNLTMLEILDLSNNSLNGEIPDFLSQLQHLKILNLEKNNLSGLIPPALNKDSLLLRVDQNPYLCEADQSNKKKKKKHNSIATPIVASVGGVLILLVVVAAMLWTAKRRKAKALMLEKDQSAISPQYTEQNDSSLRFQKQIYSYSDIVKITNNFTTIVGKGGFGTVYLGYIEDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKSLTSLVGYCNEGTNKGLVYEYMANGNLQEHLSGKRSQRNFLNWEKRLRIAVDAALGLEYLQNGCKPPIFHRDVKSTNILLNEHLHAKLSDFGLSKAVLTDGGTHVSTVIAGTPGYLDPEYYLTSRLTEKSDVYSFGVVLLEIITGQPVIAKNEEKSHISEWVRSLIGKGDINAIVDSRLEGEFDSNSVWKAVEIATACVSPNPNRRPIISVVVSELNESLSLATELAQTKYRSTDTSDPVKRVTMNLNIESLPRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ23</accession>
    <name>V7BZ23_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G108600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ23"/>
    <dbReference type="SMR" id="V7BZ23"/>
    <dbReference type="STRING" id="3885.V7BZ23"/>
    <dbReference type="Gramene" id="ESW21896">
        <property type="protein sequence ID" value="ESW21896"/>
        <property type="gene ID" value="PHAVU_005G108600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUQV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THCPERK"/>
    <dbReference type="OrthoDB" id="4812at2759"/>
    <dbReference type="PhylomeDB" id="V7BZ23"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009534">
        <property type="term" value="C:chloroplast thylakoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010207">
        <property type="term" value="P:photosystem II assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045037">
        <property type="term" value="P:protein import into chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045038">
        <property type="term" value="P:protein import into chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010027">
        <property type="term" value="P:thylakoid membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01843">
        <property type="entry name" value="Thf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017499">
        <property type="entry name" value="Thf1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03060">
        <property type="entry name" value="PS_II_psb29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34793">
        <property type="entry name" value="PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34793:SF1">
        <property type="entry name" value="PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11264">
        <property type="entry name" value="ThylakoidFormat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="248"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW21896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="297" mass="33998" checksum="EC63D84DA49A9F79" modified="2014-02-19" version="1">MAALTSLSFSAVTHCPERKKLTLSSTRFLTSSSDFFGLRTHFSYHHVRLPASNSTSNMVFQCMSSVTDAPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALGFVTVYDKLMEGYPSDEDRDAIFQAYIKALKEDPQEYRIDARKLEEWAMVQNSSSLPEFSSKEGEVEGILKDIAERAAGKDEFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAEPQKANEAITKCLGEQLPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1R2</accession>
    <name>V7C1R2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">Biotin carboxyl carrier protein of acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G035000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Plastid</location>
            <location evidence="8">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1R2"/>
    <dbReference type="SMR" id="V7C1R2"/>
    <dbReference type="STRING" id="3885.V7C1R2"/>
    <dbReference type="Gramene" id="ESW23298">
        <property type="protein sequence ID" value="ESW23298"/>
        <property type="gene ID" value="PHAVU_004G035000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUI2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="196847at2759"/>
    <dbReference type="PhylomeDB" id="V7C1R2"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06850">
        <property type="entry name" value="biotinyl_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.100:FF:000003">
        <property type="entry name" value="Acetyl-CoA carboxylase biotin carboxyl carrier protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001249">
        <property type="entry name" value="AcCoA_biotinCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050709">
        <property type="entry name" value="Biotin_Carboxyl_Carrier/Decarb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00531">
        <property type="entry name" value="BCCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45266">
        <property type="entry name" value="OXALOACETATE DECARBOXYLASE ALPHA CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45266:SF3">
        <property type="entry name" value="OXALOACETATE DECARBOXYLASE ALPHA CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01071">
        <property type="entry name" value="ACOABIOTINCC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 8" id="KW-0092">Biotin</keyword>
    <keyword evidence="8" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="6 8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="10">
        <location>
            <begin position="202"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="74"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="172"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="175"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW23298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="29257" checksum="8E9A68FAA7062023" modified="2014-02-19" version="1">MASFSVPCPKCPSISSPSLGLKSPQAPFQSGLSFKPFLSFSSLSAESASSRIQCPNNRKQFSVLKAAKVENSNSNSAPVTVKEPNVASSKEKEVLDGKQSGGTIADEASVTAFISQVVDLVKVVDSRDVVELQLKQLDCEIVIRKKEALQPPPVMAPASPPPMHYAAFAPPPAAPAAAPASSSSPKAPPALPSPAKASSPSHPPMKSPIAGTFYRSPGPGQPEFVKVGDKVKKGQVLCILEAMKMMNEIEAEESGTVTEILIENGKQVSLDTPLFVIVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1Z2</accession>
    <name>V7C1Z2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G036500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1Z2"/>
    <dbReference type="STRING" id="3885.V7C1Z2"/>
    <dbReference type="Gramene" id="ESW23315">
        <property type="protein sequence ID" value="ESW23315"/>
        <property type="gene ID" value="PHAVU_004G036500g"/>
    </dbReference>
    <dbReference type="OMA" id="KWINDAV"/>
    <dbReference type="OrthoDB" id="1427045at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="CDD" id="cd22160">
        <property type="entry name" value="F-box_AtFBL13-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053781">
        <property type="entry name" value="F-box_AtFBL13-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006566">
        <property type="entry name" value="FBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055294">
        <property type="entry name" value="FBL60-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31293">
        <property type="entry name" value="RNI-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31293:SF12">
        <property type="entry name" value="RNI-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08387">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00579">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="8"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="FBD" evidence="2">
        <location>
            <begin position="253"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="324" mass="37012" checksum="6BDB3543A77BECDA" modified="2014-02-19" version="1">MADIVSGFPDSILCYILSFLPTKQVVATSVLSKRWNLLWRSVPSFDYEHHDPTGDYEDDLDACSDFLYSMFSHLLLRDMDKPLHRLRLTCCSGYNHYSIEIWIEAALRRSSRLEHLDLNVYKDFVVPSVVFSCITLVVLKLANLVLKDVSFADFPFLKILHLNSISFSGCQDLFKQFLSGSPNLEDLEAKNLDSNPAEKVNRLPKLVRANIDAHIVPLENVKNVQVLVTNGKQNLVAEDDEEAILPCPDPVPACILLHLTCCCLTNYSGSAFEFKFAEYIMQNANYLQFFAFRIYRNNPSRRDDMIRDLSSCKKISDTCKLEFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3J3</accession>
    <name>V7C3J3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G082200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3J3"/>
    <dbReference type="SMR" id="V7C3J3"/>
    <dbReference type="Gramene" id="ESW23860">
        <property type="protein sequence ID" value="ESW23860"/>
        <property type="gene ID" value="PHAVU_004G082200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0637">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNIVVIS"/>
    <dbReference type="OrthoDB" id="28755at2759"/>
    <dbReference type="PhylomeDB" id="V7C3J3"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008506">
        <property type="term" value="F:sucrose:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd17313">
        <property type="entry name" value="MFS_SLC45_SUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000174">
        <property type="entry name" value="Sucrose transport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005989">
        <property type="entry name" value="Suc_symporter_pln"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01301">
        <property type="entry name" value="GPH_sucrose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19432:SF89">
        <property type="entry name" value="SUCROSE_H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19432">
        <property type="entry name" value="SUGAR TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13347">
        <property type="entry name" value="MFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="161"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="209"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="267"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="309"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="342"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="384"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="420"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="453"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW23860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="494" mass="52709" checksum="7FE4E187456702E8" modified="2014-02-19" version="1">MEEQPKLEPSPLRKMVAVSSIAAGVQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSPFGRRRPFILTGSLAVAVAIILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANGFFSFFMAVGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLSLCSIVLTCVNDPQYIPSKQEEAEDEGKTHFSCFLGELCVAFKGLQKPMWMLMLVTAINWLAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVHAGSLGLMLNSVVLAVMSLGVEPLGRLVGVKWLWAMVNVILAACLALTVLITKIAEQQRALNPALIGDPSMDVKGGAMAFFSVLGIPLAVTYSVPFALASIYSSSSGAGQGLSLGLLNVAIVIPQMIISAISGPWDAWFGGGNLPAFVLGAVAAAVSAILAVVLLPTPKKEDEAKISSLSMGSFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5P9</accession>
    <name>V7C5P9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_004G149200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7C5P9"/>
    <dbReference type="STRING" id="3885.V7C5P9"/>
    <dbReference type="Gramene" id="ESW24663">
        <property type="protein sequence ID" value="ESW24663"/>
        <property type="gene ID" value="PHAVU_004G149200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0606">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTHYVEN"/>
    <dbReference type="OrthoDB" id="162894at2759"/>
    <dbReference type="PhylomeDB" id="V7C5P9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05579">
        <property type="entry name" value="STKc_MAST_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000147">
        <property type="entry name" value="probable serine/threonine protein kinase IREH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000961">
        <property type="entry name" value="AGC-kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058783">
        <property type="entry name" value="IREH1/IRE-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050236">
        <property type="entry name" value="Ser_Thr_kinase_AGC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24356">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24356:SF1">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE GREATWALL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26031">
        <property type="entry name" value="IREH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51285">
        <property type="entry name" value="AGC_KINASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="882"/>
            <end position="1171"/>
        </location>
    </feature>
    <feature type="domain" description="AGC-kinase C-terminal" evidence="16">
        <location>
            <begin position="1172"/>
            <end position="1276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="448"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="651"/>
            <end position="692"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="727"/>
            <end position="749"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1216"/>
            <end position="1239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="59"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="69"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="106"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="14">
        <location>
            <begin position="182"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="221"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="501"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="517"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="652"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="731"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="1224"/>
            <end position="1235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW24663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1293" mass="142441" checksum="B4F33CD9A9264557" modified="2014-02-19" version="1">MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGSGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEASKESPVKKLAAGEGRESSASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEAASLNRVGFREGSRGGAPAAGGWGDNRNNSDSVSTSGSMPSREQSPVVLPRSRLQNGESSSEAAGNQASSWAQSGGLRSEDVCTPEAAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQDHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKTLKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSSRDRMASWKKFPSPSGKSPKEAAQLKDQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHVSKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCSQKDSQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSTFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANASLDDDRTSSYLLSCLDDLRVVVERRKFDALTVESFGTRIEKLIREKYLQLTELVDVEKIDTESTADDDLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVLTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQNIFDNILNRKIPWPGVPEEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGASVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C755</accession>
    <name>V7C755_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_004G155300g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C755"/>
    <dbReference type="SMR" id="V7C755"/>
    <dbReference type="STRING" id="3885.V7C755"/>
    <dbReference type="Gramene" id="ESW24731">
        <property type="protein sequence ID" value="ESW24731"/>
        <property type="gene ID" value="PHAVU_004G155300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYNIAPE"/>
    <dbReference type="OrthoDB" id="1416789at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 15" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755852" description="Protein kinase domain-containing protein" evidence="15">
        <location>
            <begin position="30"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="220"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="501"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="509"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW24731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="520" mass="58384" checksum="13E417326E70370D" modified="2014-02-19" version="1">MYAHELKLKMFRTLTLFFLFSVTPTLVLPTKSDVNFNTSSMLLAQTHSKTLNKVGDDVFMACDDRKNCSSNNSVDNHSAYVARRLETTNTNSSDCSTNPYIRVCYNIAPEAPPSPPERSISLSPAPATAPESMFSLPPDYSQDSDNHQHTRTIIIIIGVVSVVIGGFFFIIYCFRRKSSSRLVKSCFTTNNDSNIEAFLRNHGAITQKRYKFSEVKKMTNSFKVKLGQGGFGAVYEGKLPTGSPVAVKLLNESKGNGEDFINEVLSISRTFHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYKKGLVSIVSLSWDNLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCVMNESIISMSDARGTMGYLAPEMWSRNFGRVSQKSDVYSYGMMLLEMVGGRKNINVEVSRTSEIYFPHLAYKRLELDNDVRSNEVINTEENAISKRMTIVGLWCIQTLPNDRPTMTRVIDMLEGNMNFLETPPKPLFSSPTRSETQSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7B6</accession>
    <name>V7C7B6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G161300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7B6"/>
    <dbReference type="SMR" id="V7C7B6"/>
    <dbReference type="STRING" id="3885.V7C7B6"/>
    <dbReference type="Gramene" id="ESW24801">
        <property type="protein sequence ID" value="ESW24801"/>
        <property type="gene ID" value="PHAVU_004G161300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMLDTFC"/>
    <dbReference type="OrthoDB" id="689350at2759"/>
    <dbReference type="PhylomeDB" id="V7C7B6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044526">
        <property type="entry name" value="NAKR1-3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46119:SF23">
        <property type="entry name" value="HEAVY METAL TRANSPORT_DETOXIFICATION SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46119">
        <property type="entry name" value="OS08G0405700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="1">
        <location>
            <begin position="65"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15236" checksum="7BB2A0AC3436D079" modified="2014-02-19" version="1">MGKLGRMLDTFCLSFGSNTCFCMNSMEFEDEFEKKPLIVSASSDHKLRLKDVVDGKQTLAFQLKPQIVTLRVSMHCYGCAKKVEKHISKLEGVSSYKVDLETKIVVVMGDILPSEVLQSVSKVKNAELWKSQGSKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7L0</accession>
    <name>V7C7L0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Malic enzyme</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_004G170800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(S)-malate + NADP(+) = pyruvate + CO2 + NADPH</text>
            <dbReference type="Rhea" id="RHEA:18253"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.40"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>oxaloacetate + H(+) = pyruvate + CO2</text>
            <dbReference type="Rhea" id="RHEA:15641"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="EC" id="1.1.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Divalent metal cations. Prefers magnesium or manganese.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the malic enzymes family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7L0"/>
    <dbReference type="SMR" id="V7C7L0"/>
    <dbReference type="STRING" id="3885.V7C7L0"/>
    <dbReference type="Gramene" id="ESW24906">
        <property type="protein sequence ID" value="ESW24906"/>
        <property type="gene ID" value="PHAVU_004G170800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1257">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NENYEKG"/>
    <dbReference type="OrthoDB" id="5365701at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004473">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006108">
        <property type="term" value="P:malate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd05312">
        <property type="entry name" value="NAD_bind_1_malic_enz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10380:FF:000002">
        <property type="entry name" value="Malic enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000067">
        <property type="entry name" value="Malic enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="entry name" value="Malic enzyme, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminoacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015884">
        <property type="entry name" value="Malic_enzyme_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001891">
        <property type="entry name" value="Malic_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF010052">
        <property type="entry name" value="PRK13529.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23406">
        <property type="entry name" value="MALIC ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23406:SF89">
        <property type="entry name" value="NADP-DEPENDENT MALIC ENZYME 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000106">
        <property type="entry name" value="ME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00072">
        <property type="entry name" value="MALOXRDTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="Aminoacid dehydrogenase-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00331">
        <property type="entry name" value="MALIC_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Malic enzyme N-terminal" evidence="13">
        <location>
            <begin position="116"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="Malic enzyme NAD-binding" evidence="12">
        <location>
            <begin position="307"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>(S)-malate</name>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="282"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="283"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="447"/>
        </location>
        <ligand>
            <name>(S)-malate</name>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="491"/>
        </location>
        <ligand>
            <name>(S)-malate</name>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00050924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000106-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW24906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="591" mass="65351" checksum="8BD89E0E806F0C13" modified="2014-02-19" version="1">MESILKPLRDGESVLDLSPRSTVSGGVEDVYGEDHATEDQLITPWNFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTITSQQLQEKQLINNIRQYQVPLQKYIAMMELQEMNERLFYKLLVDNVEELLPIVYTPVVGEACQKYGSIFKRPQGLFISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGSLADHTFLFLGAGEAGTGIAELIALEMSKRTKIPIEETRKKIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVDSLLEAVKVIKPTVLVGSSGVGKTFTKEVIEALASINEKPLVMALSNPTSQAECTAEEAYQWSEGRAIFASGSPFDPIEYKGKVYYSGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKLVTEENYKKGLIYPPFSDIRTISANIAADVAAKAYELGLATRLPRPQNLVKYAESCMYTPVYRNYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7C877</accession>
    <name>V7C877_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Polyadenylate-binding protein</fullName>
            <shortName evidence="11">PABP</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G0475001g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Binds the poly(A) tail of mRNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the polyadenylate-binding protein type-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C877"/>
    <dbReference type="STRING" id="3885.V7C877"/>
    <dbReference type="Gramene" id="ESW25573">
        <property type="protein sequence ID" value="ESW25573"/>
        <property type="gene ID" value="PHAVU_003G0475001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0123">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNGRMLN"/>
    <dbReference type="OrthoDB" id="19742at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd12379">
        <property type="entry name" value="RRM2_I_PABPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12380">
        <property type="entry name" value="RRM3_I_PABPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12381">
        <property type="entry name" value="RRM4_I_PABPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1900.10:FF:000003">
        <property type="entry name" value="Polyadenylate-binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000217">
        <property type="entry name" value="Polyadenylate-binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000239">
        <property type="entry name" value="Polyadenylate-binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000285">
        <property type="entry name" value="Polyadenylate-binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1900.10">
        <property type="entry name" value="c-terminal domain of poly(a) binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036053">
        <property type="entry name" value="PABP-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006515">
        <property type="entry name" value="PABP_1234"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002004">
        <property type="entry name" value="PABP_HYD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045305">
        <property type="entry name" value="RRM2_I_PABPs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003954">
        <property type="entry name" value="RRM_euk-type"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01628">
        <property type="entry name" value="PABP-1234"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24012">
        <property type="entry name" value="RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00658">
        <property type="entry name" value="MLLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00517">
        <property type="entry name" value="PolyA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00361">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63570">
        <property type="entry name" value="PABC (PABP) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51309">
        <property type="entry name" value="PABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="8 10 11" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="RRM" evidence="13">
        <location>
            <begin position="34"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="13">
        <location>
            <begin position="125"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="13">
        <location>
            <begin position="227"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="PABC" evidence="14">
        <location>
            <begin position="464"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="388"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU362004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="61387" checksum="8E9CBDA0D9A07FED" modified="2014-02-19" version="1" fragment="single">ARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGAGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQEREGAIDKAKFNNVFVKNLAESTTDDELKVIFGEFGTITSAVVMRDGDGKSKCLFVNFENADDAARAVEALNGKKLDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSIGDDKLKELFSPFGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMYPPGGPGIGQQIFYQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQGQRPGGRRAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGIPDVPMPGVAGGMFSVPYDVGGMPLRDASHSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQQAGGAADQLASLSLNDNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAH5</accession>
    <name>V7CAH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G180100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAH5"/>
    <dbReference type="SMR" id="V7CAH5"/>
    <dbReference type="STRING" id="3885.V7CAH5"/>
    <dbReference type="Gramene" id="ESW27172">
        <property type="protein sequence ID" value="ESW27172"/>
        <property type="gene ID" value="PHAVU_003G180100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSV6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCWIMAD"/>
    <dbReference type="OrthoDB" id="2015023at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009579">
        <property type="term" value="C:thylakoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071277">
        <property type="term" value="P:cellular response to calcium ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009704">
        <property type="term" value="P:de-etiolation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090333">
        <property type="term" value="P:regulation of stomatal closure"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00158">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044690">
        <property type="entry name" value="CAS_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34209:SF1">
        <property type="entry name" value="CALCIUM SENSING RECEPTOR, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34209">
        <property type="entry name" value="RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="234"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="392" mass="41330" checksum="D4362E882429CC92" modified="2014-02-19" version="1">MEIAAMASSVTPRPSLPTPSPQTVVTTFSKPQLRRTQIALPTASTISILALFAPPNEAKAAVSIAKDQIVSSLTQVEKTIDQVQEVGSSVLDTAQRVAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASRKAQEALQSSGVDTQPVITAAKTVVDAAQQTTKVIDVAKPIASSTVETISSSDPTVIAGAAGALFVAYLLIPPVWSVISSNLRGYKGDLTPAQALDLISAQNYVLIDIRSEKDKDKTGIPRLPSSAKNRMVAIPLEELPSKLRGQVKNVKKLEAEIVALKISYLKKINKSTNIVILDSYSDVAKTVGRTATSLGFKNTWIVADGFSGNKGWLQSRLGSDSYNFSFAEVLSPSRIIPAAVRGFGTTSQSSTKLLPGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB53</accession>
    <name>V7CB53_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G131500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB53"/>
    <dbReference type="SMR" id="V7CB53"/>
    <dbReference type="STRING" id="3885.V7CB53"/>
    <dbReference type="Gramene" id="ESW26583">
        <property type="protein sequence ID" value="ESW26583"/>
        <property type="gene ID" value="PHAVU_003G131500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0134">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YEGTLMC"/>
    <dbReference type="OrthoDB" id="1663137at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016629">
        <property type="term" value="F:12-oxophytodienoate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009695">
        <property type="term" value="P:jasmonic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031408">
        <property type="term" value="P:oxylipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02933">
        <property type="entry name" value="OYE_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.70:FF:000073">
        <property type="entry name" value="12-oxophytodienoate reductase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045247">
        <property type="entry name" value="Oye-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893:SF112">
        <property type="entry name" value="12-OXOPHYTODIENOATE REDUCTASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893">
        <property type="entry name" value="NADH OXIDOREDUCTASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51395">
        <property type="entry name" value="FMN-linked oxidoreductases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0288">FMN</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADH:flavin oxidoreductase/NADH oxidase N-terminal" evidence="7">
        <location>
            <begin position="7"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="41760" checksum="FE9D67E81AE843D1" modified="2014-02-19" version="1">MADNPTLFSPYNMAKFNLSHRVVLAPMTRCRALQGIPNAAHAEYYAQRSTPGGFLITEGTSISPTSSGFPNVPGIYSDEQVEAWRNVVDAVHAKGSIIFCQLWHVGRASNPVYQPGGAAPISSTSKPISEKWKILLPDGSHGVFSEPHALTTAEISEVVQHYRQSAINAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSVENRCRFLMEVVEGVVSGIGAERVGVRISPAIDHMDAFDSDPLGLGLAVIERLNKIQREKGRKLSYLHVTQPRFSLLEKTSLGESEEESVNLMEEWRKGYEGTLMCSGGFSRDSGMEAVAKGHADLVSFGRLFISNPDLVSKLKLNAPLTNYNRNTFYTSHPVIGYTDYPFLHTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB81</accession>
    <name>V7CB81_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G0939000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB81"/>
    <dbReference type="Gramene" id="ESW26136">
        <property type="protein sequence ID" value="ESW26136"/>
        <property type="gene ID" value="PHAVU_003G0939000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW26136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="25" mass="2877" checksum="53C0EEC21E147EEB" modified="2014-02-19" version="1" fragment="single">ANSISYTKKILQTQIFGPIYFFALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBC5</accession>
    <name>V7CBC5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G208000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBC5"/>
    <dbReference type="SMR" id="V7CBC5"/>
    <dbReference type="STRING" id="3885.V7CBC5"/>
    <dbReference type="Gramene" id="ESW27507">
        <property type="protein sequence ID" value="ESW27507"/>
        <property type="gene ID" value="PHAVU_003G208000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSMM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PFNKIYA"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="PhylomeDB" id="V7CBC5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008126">
        <property type="term" value="F:acetylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22835:SF557">
        <property type="entry name" value="LIPASE_HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22835">
        <property type="entry name" value="ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755164" description="GDSL esterase/lipase" evidence="5">
        <location>
            <begin position="31"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW27507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="382" mass="42191" checksum="33C329CD5A94F8A3" modified="2014-02-19" version="1">MASCVTSMSSSTILLITICTLSSILSVASAAASSVEGRTRPFKKVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGITFFNHSTNRYSDGRLVIDFVAEDLSLPYLPPYRHSKGNDTYGVNFAVAGSTAINHLFFVKNNLSLDITPQSIQTQMIWFNRYLESQECEESKCKDFDDTLFWFGEIGVNDYAYTLGSTVPDDTIRKLAISSVSGALQALLEKGAKYLVVQGLPLSGCLTLSMYLAPPDDRDEIGCVKSVNNQSNYHNLVLQNKLQEFRKQYPQAVILYADYFNAYRTIMKNPTKYGFKEVFNVCCGSGEPPYNFSVFGTCGTPNATACTNPSQYINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFLLAQKEKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD14</accession>
    <name>V7CD14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">22alpha-hydroxysteroid 23-monooxygenase</fullName>
            <ecNumber evidence="18">1.14.14.147</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="21">(22R,23R)-22,23-dihydroxy-campest-4-en-3-one synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="22">(22R,23R)-22,23-dihydroxycampesterol synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="19">6-deoxoteasterone synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="20">Teasterone synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="27" type="ORF">PHAVU_003G258400g</name>
    </gene>
    <organism evidence="27 28">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="28" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="28">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>(22S,24R)-22-hydroxy-5alpha-ergostan-3-one + reduced [NADPH--hemoprotein reductase] + O2 = 3-dehydro-6-deoxoteasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:27325"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:20710"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:59411"/>
            <dbReference type="EC" id="1.14.14.147"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>3-epi-6-deoxocathasterone + reduced [NADPH--hemoprotein reductase] + O2 = 6-deoxotyphasterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:27321"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:20717"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:59410"/>
            <dbReference type="EC" id="1.14.14.147"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 24">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Hormone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="14">Plant hormone biosynthesis; brassinosteroid biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="17">Steroid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 25">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.147" evidence="18"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD14"/>
    <dbReference type="SMR" id="V7CD14"/>
    <dbReference type="STRING" id="3885.V7CD14"/>
    <dbReference type="Gramene" id="ESW28092">
        <property type="protein sequence ID" value="ESW28092"/>
        <property type="gene ID" value="PHAVU_003G258400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIPCYPK"/>
    <dbReference type="OrthoDB" id="3945418at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102097">
        <property type="term" value="F:22alpha-hydroxysteroid 23-monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016709">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016132">
        <property type="term" value="P:brassinosteroid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010268">
        <property type="term" value="P:brassinosteroid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
        <property type="term" value="P:leaf development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048441">
        <property type="term" value="P:petal development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048443">
        <property type="term" value="P:stamen development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016125">
        <property type="term" value="P:sterol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11043">
        <property type="entry name" value="CYP90-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000048">
        <property type="entry name" value="3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286">
        <property type="entry name" value="CYTOCHROME P450 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286:SF319">
        <property type="entry name" value="CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="23" id="KW-1069">Brassinosteroid biosynthesis</keyword>
    <keyword evidence="5 24 25" id="KW-0349">Heme</keyword>
    <keyword evidence="11 24 25" id="KW-0408">Iron</keyword>
    <keyword evidence="23" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="23" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13 26" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 24 25" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 25" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="10 25" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="28" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="6 26" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 26" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="26">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="24">
        <location>
            <position position="440"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00037910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00050234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00051572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00060577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00066344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00075093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00076244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00078776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00083187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00084112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="26">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="EMBL" id="ESW28092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="491" mass="56378" checksum="1DB2F5088135A4A5" modified="2014-02-19" version="1">MEWIIGLWTLMGVFICCWYWFVCVKKENSNRVKQKKKKKGKVPRGNKGWPLLGETLEFIACGYTSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGEYSILQMNGNMHRKIHSLLGGFLRSPQFKARITTDIQHSVQQCFATWTHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPIKFPGTRLHKSLKAKERMMKIVQRVVEERNNSIHNNKNSEEKGVAANDVVDVLLRDIGDRNTISNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDYPLALSKLLEENMELKRQKNSSDDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKAVKDVEIKGYLIPKDWCVVASLTSVHMDGMNYENPFKFDPWRWEKSGAGANNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEEDEIIYFPTVKMKRKLPISVTTINT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDG0</accession>
    <name>V7CDG0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Thaumatin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G263400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thaumatin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDG0"/>
    <dbReference type="SMR" id="V7CDG0"/>
    <dbReference type="Gramene" id="ESW28154">
        <property type="protein sequence ID" value="ESW28154"/>
        <property type="gene ID" value="PHAVU_003G263400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPIR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGEVECK"/>
    <dbReference type="OrthoDB" id="430315at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd09218">
        <property type="entry name" value="TLP-PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.110.10:FF:000001">
        <property type="entry name" value="THAUMATIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.110.10">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037176">
        <property type="entry name" value="Osmotin/thaumatin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001938">
        <property type="entry name" value="Thaumatin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017949">
        <property type="entry name" value="Thaumatin_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31048">
        <property type="entry name" value="OS03G0233200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00314">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002703">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00347">
        <property type="entry name" value="THAUMATIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00205">
        <property type="entry name" value="THN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49870">
        <property type="entry name" value="Osmotin, thaumatin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00316">
        <property type="entry name" value="THAUMATIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51367">
        <property type="entry name" value="THAUMATIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755551" description="Thaumatin-like protein" evidence="3">
        <location>
            <begin position="27"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="41"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="86"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="101"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="155"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="160"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="168"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="184"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="194"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR002703-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="308" mass="32085" checksum="06CD1D4D17F25EA4" modified="2014-02-19" version="1">MSPFSHSSHQSIVFLLILAFIGLRHAGMGVSATTFTFVNKCDHTVWPGILGKPDLGTSGFELKRGSTRTFDAPPGWSGRFWGRTGCQFDDSGHGTCATGDCGSGEVLCNGNGATPPATLAEFTLGSGSPDYYDVSLVDGYNLPMMVDASGGSGLCATTGCGADLNRRCPAELRVEGGDACQSACRAFGKPEFCCSGAFSSPSVCAPSMYSEIFKNACPKSYSYAFDDATSTFTCTAADYTVTFCPSSSPSLKSLMESGPGSSVEQAAVATSSWIANLATGDSTRRQPVSSSNSAFFVSVTFILSYLVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE13</accession>
    <name>V7CE13_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine/threonine protein phosphatase 2A regulatory subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G176100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the phosphatase 2A regulatory subunit B56 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE13"/>
    <dbReference type="SMR" id="V7CE13"/>
    <dbReference type="STRING" id="3885.V7CE13"/>
    <dbReference type="Gramene" id="ESW27125">
        <property type="protein sequence ID" value="ESW27125"/>
        <property type="gene ID" value="PHAVU_003G176100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW27126">
        <property type="protein sequence ID" value="ESW27126"/>
        <property type="gene ID" value="PHAVU_003G176100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2085">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RERACAK"/>
    <dbReference type="OrthoDB" id="10264446at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000159">
        <property type="term" value="C:protein phosphatase type 2A complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019888">
        <property type="term" value="F:protein phosphatase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000041">
        <property type="entry name" value="Serine/threonine protein phosphatase 2A regulatory subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002554">
        <property type="entry name" value="PP2A_B56"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257:SF31">
        <property type="entry name" value="SERINE_THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' KAPPA ISOFORM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01603">
        <property type="entry name" value="B56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028043">
        <property type="entry name" value="PP2A_B56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="14"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR028043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW27126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="509" mass="57444" checksum="26F226AB027A6A9D" modified="2014-02-19" version="1">MIKQILSKLPKKVPKSDSSDSSRSDSSNSTSFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPCLSFKDVSNTQKQSLFISKLNLCCKIYDMSDPDKSSSEQDLKRQTLLELVDFVSSGSVKFTEPAIAALCKMCATNLFRVFPPKFRTSTAGGETEDEEPMFDPAWSHLQVVYDLLLQFINFNSLDVKVAKAHVDHAFILRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFTRKSVSNIIYRFVFETERHNGIAEMLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGIYHQQLTYCVVQFIDKDQRLASSVIKGLLKYWPVTNSQKELMFISELEEILEMTSMAEFQKIMVPLFRRMAQCLNSSHYQVAERAHLLWNNEHILNLITQNRQVILPLVFSAIVHNAQSHWNQAVLNLTQNIRKMLSQMDEELVAACQRRTEEEDSVASAAAERRRVTWERLEAAASVQSSSMGGGGDVLVPVKSATCSVAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEA2</accession>
    <name>V7CEA2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Cytochrome P450 78A5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G183100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEA2"/>
    <dbReference type="SMR" id="V7CEA2"/>
    <dbReference type="STRING" id="3885.V7CEA2"/>
    <dbReference type="Gramene" id="ESW27206">
        <property type="protein sequence ID" value="ESW27206"/>
        <property type="gene ID" value="PHAVU_003G183100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CDSDLPN"/>
    <dbReference type="OrthoDB" id="3934656at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048608">
        <property type="term" value="P:reproductive structure development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd11076">
        <property type="entry name" value="CYP78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000016">
        <property type="entry name" value="Cytochrome P450 78A5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051996">
        <property type="entry name" value="Cytochrome_P450_78A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47946">
        <property type="entry name" value="CYTOCHROME P450 78A7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47946:SF14">
        <property type="entry name" value="CYTOCHROME P450 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="27"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="474"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="540" mass="60396" checksum="B880F7DDDA2D7BAB" modified="2014-02-19" version="1">MSLELCSLFLPLPTCSTILTFDVLLGVMFLVAIFGYWLVPGGLAWALSKFRQGKSLANKPAIPGPSGFPVVGLVSAFTGPLTHRVLAKLAHTFDAKPLMAFSLGFTPFIISSHPDTAKEMLSSSAFADRPIKESAYELLFHRAMGFAPYGEYWRSLRRISATHMFSPKRIAASGKFRTEVGAQMVKDIMDLMRRDGEVEVRKVLHFGSLNNVMMSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWSDHFPLLGRLDLQGVRKRCRSLVDRVNVFVGKIIVEHREKRAAVGEDKVKDNESSGDFVDVLLDLEKENKLEHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGCRRSVSDKDLLNLPYVRSIVKETLRMHPPGPLLSWARLSIHDTQIGNHFVPAGTTAMVNMWAITHDKEVWSDPEEFKPERFEKEEVQIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMFLQQLKWIPSDSGVDLSECLQLSMKMKCSLITKVVTRPSPFIPSVSHYFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEI7</accession>
    <name>V7CEI7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G190800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the nucleosome assembly protein (NAP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEI7"/>
    <dbReference type="SMR" id="V7CEI7"/>
    <dbReference type="STRING" id="3885.V7CEI7"/>
    <dbReference type="Gramene" id="ESW27311">
        <property type="protein sequence ID" value="ESW27311"/>
        <property type="gene ID" value="PHAVU_003G190800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1508">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNDDHEN"/>
    <dbReference type="OrthoDB" id="19419at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006334">
        <property type="term" value="P:nucleosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1120.90">
        <property type="entry name" value="Nucleosome assembly protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037231">
        <property type="entry name" value="NAP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002164">
        <property type="entry name" value="NAP_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11875">
        <property type="entry name" value="TESTIS-SPECIFIC Y-ENCODED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00956">
        <property type="entry name" value="NAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143113">
        <property type="entry name" value="NAP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="215"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="23"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="220"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW27311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="251" mass="29420" checksum="11DE13EBFC809298" modified="2014-02-19" version="1">MVGDKTKKLKIAENLEDTIDEKLILSIEKLQEVQDELDKINEEASDKVLEVEQKFNEIRKPVYDKRNEIIVKSIPDFWFTAFMNHPALCELLNLEDQKIFKYLGSLEVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFFEEGSTKITATPIKWKEGKGLPNGVNHDKNGKRGRIDISFFTWFSDSEQKDDTDEIHDEVAELIKEDLWPNPLTYFNNEFDEEDFDDEADDEEKDEEDQEDDDDEESNDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEU2</accession>
    <name>V7CEU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">U3 small nucleolar ribonucleoprotein protein MPP10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G201700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in nucleolar processing of pre-18S ribosomal RNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
            <location evidence="1 7">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the MPP10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEU2"/>
    <dbReference type="SMR" id="V7CEU2"/>
    <dbReference type="STRING" id="3885.V7CEU2"/>
    <dbReference type="Gramene" id="ESW27436">
        <property type="protein sequence ID" value="ESW27436"/>
        <property type="gene ID" value="PHAVU_003G201700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2600">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFAEDFG"/>
    <dbReference type="OrthoDB" id="445326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034457">
        <property type="term" value="C:Mpp10 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005732">
        <property type="term" value="C:sno(s)RNA-containing ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012173">
        <property type="entry name" value="Mpp10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17039">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17039:SF0">
        <property type="entry name" value="U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04006">
        <property type="entry name" value="Mpp10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017300">
        <property type="entry name" value="snoRNP_Mpp10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 7" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3 7" id="KW-0698">rRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="90"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="489"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="117"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="173"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="189"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="234"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="272"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="494"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR017300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW27436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="528" mass="59958" checksum="6A26A37E22885669" modified="2014-02-19" version="1">MANASDAGVEALRRLKATDPPSWLAPNVELSEAARTASQYLFSTLQPFSPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKQLSENPEEISQLKVPSKSGSKVEQNSRDEWEGDSDGFDEELDEEEEEEGDEDEGKEGEEERMEVEEEDEVEEEEEEEEENEDGGGIEDKFLKIDELAKYLDKEEEDFENGEADREGEEEDDDEESDEDGDFGSGDEDDVDEEAENMESARYEDFFGGKKERGSKRKAQVLRESKYSEDEDDMEFDNEKKGTASAHEKQLEKIQSKIEQMEKANIDPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGLFNDVQRLSKLPSKVPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKDEAVKKTKKKAQEGAIHSPVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFE3</accession>
    <name>V7CFE3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G2503000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFE3"/>
    <dbReference type="STRING" id="3885.V7CFE3"/>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIIYAEC"/>
    <dbReference type="OrthoDB" id="439808at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052462">
        <property type="entry name" value="SLIRP/GR-RBP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48027">
        <property type="entry name" value="HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="93" mass="10282" checksum="D2D11A37EC70D542" modified="2014-02-19" version="1" fragment="single">LSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRSRGFGFIIFSNEDDAKCAKEAMDGKALLGRPLRISIALEKARGVPVVVPRLSDIGHLNRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHQ2</accession>
    <name>V7CHQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G093000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7CHQ2"/>
    <dbReference type="STRING" id="3885.V7CHQ2"/>
    <dbReference type="Gramene" id="ESW29717">
        <property type="protein sequence ID" value="ESW29717"/>
        <property type="gene ID" value="PHAVU_002G093000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0714">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFTEMAK"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="PhylomeDB" id="V7CHQ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44743:SF10">
        <property type="entry name" value="J DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44743">
        <property type="entry name" value="PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="9"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="172" mass="19993" checksum="45C7E4A9BD3E6A0D" modified="2014-02-19" version="1">MEYCKEGSSYYNVLGVSSDSNVEEIKRAYRKLAMQWHPDRWTNTPSLLGEAKHKFQQIQEAYSVLSDSKKRTVYDAGLYDPQEEEDEGFSDFLEEMLSLMAQERKEKKHYDLEELQGMLMDMAKGFECPSMYCGVPSVIDESRCLKRTRFDTSTMETKGSHFQVPDLNLYCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHU6</accession>
    <name>V7CHU6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G089700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHU6"/>
    <dbReference type="SMR" id="V7CHU6"/>
    <dbReference type="STRING" id="3885.V7CHU6"/>
    <dbReference type="Gramene" id="ESW29679">
        <property type="protein sequence ID" value="ESW29679"/>
        <property type="gene ID" value="PHAVU_002G089700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVE0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TEDWANA"/>
    <dbReference type="OrthoDB" id="1686353at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000002">
        <property type="entry name" value="probable WRKY transcription factor 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 36-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429:SF86">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 61-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="7">
        <location>
            <begin position="139"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="32"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="48142" checksum="6CF4B6DDDB713A3C" modified="2014-02-19" version="1">MEQAREENKMLKFLDILEQDKPEDATNAKGVSSQSEESEPLSLSLGISFKGKIKGKRKQDEGMDRGLTLGLDINLDPVDHAEAANISSSASSLGGGKEEEPSEMWPPSKVLKTMKNVDKSEAFQNDQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPLCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQCPSLSSEHGHGLVNSAISSITKFSAPNYNPHNALNFSTYQISRPHQFYFPNSSISSLNYHPTITLDLTAPPTASNSSFPHMPKYSSTNLNFSSDFSPPQSIMPPSPWSSYSGYFNSRALTHNINHGGYFLNPGSQNQPLEHLHQPICMTNNNFPQRFLPDSIIAATKAITSNPKFHSVLATALTTYVGNGASGDTLRENHVLENAELSLKLCSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIJ3</accession>
    <name>V7CIJ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Adenylyl-sulfate kinase</fullName>
            <ecNumber evidence="3 11">2.7.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G010900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="14" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the synthesis of activated sulfate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>adenosine 5'-phosphosulfate + ATP = 3'-phosphoadenylyl sulfate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24152"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="ChEBI" id="CHEBI:58339"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.25"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="10">
            <dbReference type="Rhea" id="RHEA:24153"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 11">Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the APS kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.25" evidence="3 11"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIJ3"/>
    <dbReference type="SMR" id="V7CIJ3"/>
    <dbReference type="STRING" id="3885.V7CIJ3"/>
    <dbReference type="Gramene" id="ESW28706">
        <property type="protein sequence ID" value="ESW28706"/>
        <property type="gene ID" value="PHAVU_002G010900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28707">
        <property type="protein sequence ID" value="ESW28707"/>
        <property type="gene ID" value="PHAVU_002G010900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0635">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCASMKL"/>
    <dbReference type="OrthoDB" id="506431at2759"/>
    <dbReference type="UniPathway" id="UPA00140">
        <property type="reaction ID" value="UER00205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004020">
        <property type="term" value="F:adenylylsulfate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019344">
        <property type="term" value="P:cysteine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070814">
        <property type="term" value="P:hydrogen sulfide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000103">
        <property type="term" value="P:sulfate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02027">
        <property type="entry name" value="APSK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000629">
        <property type="entry name" value="Adenylyl-sulfate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00065">
        <property type="entry name" value="Adenylyl_sulf_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002891">
        <property type="entry name" value="APS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059117">
        <property type="entry name" value="APS_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00455">
        <property type="entry name" value="apsK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003013">
        <property type="entry name" value="PRK03846.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11055:SF76">
        <property type="entry name" value="ADENYLYL-SULFATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11055">
        <property type="entry name" value="BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01583">
        <property type="entry name" value="APS_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0198">Cysteine biosynthesis</keyword>
    <keyword evidence="7 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APS kinase" evidence="12">
        <location>
            <begin position="123"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00052227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW28706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="33399" checksum="7B067D7FA21A5DB9" modified="2014-02-19" version="1">MSAVQALYPPCCCGMWLQIVECGHSATEKLGFTNFCGIDAIGISRNRKRLLKPIMAKENDGAFWIEDGHQVKKPNGLTPLANHSAALFGKNLSEMSNIGNSMNILWHECPIQKHDREHLLKQKGCVIWLTGLSGSGKSTLACFLSRSLHSRGKLTYILDGDNIRHGLNRDLSFRAEDRSENIRRIGEVAKLLADAGLICIASLISPYRKDRDACRALLPEGNFIEVFIDVPLEVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPYSCEIVLQQKGSECTSLGDMTEIVISYLDKKGYLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ11</accession>
    <name>V7CJ11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein transport protein sec16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G063200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Golgi apparatus membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the SEC16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7CJ11"/>
    <dbReference type="Gramene" id="ESW29348">
        <property type="protein sequence ID" value="ESW29348"/>
        <property type="gene ID" value="PHAVU_002G063200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1913">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SENQMQA"/>
    <dbReference type="OrthoDB" id="8918678at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070971">
        <property type="term" value="C:endoplasmic reticulum exit site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012507">
        <property type="term" value="C:ER to Golgi transport vesicle membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007030">
        <property type="term" value="P:Golgi organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070973">
        <property type="term" value="P:protein localization to endoplasmic reticulum exit site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd09233">
        <property type="entry name" value="ACE1-Sec16-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.1030:FF:000005">
        <property type="entry name" value="Protein transport protein sec16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024340">
        <property type="entry name" value="Sec16_CCD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024298">
        <property type="entry name" value="Sec16_Sec23-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13402">
        <property type="entry name" value="RGPR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13402:SF6">
        <property type="entry name" value="SECRETORY 16, ISOFORM I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12932">
        <property type="entry name" value="Sec16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12931">
        <property type="entry name" value="TPR_Sec16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Sec16 central conserved" evidence="9">
        <location>
            <begin position="564"/>
            <end position="685"/>
        </location>
    </feature>
    <feature type="domain" description="Sec16 Sec23-binding" evidence="8">
        <location>
            <begin position="747"/>
            <end position="1012"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="62"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="440"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1034"/>
            <end position="1130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1208"/>
            <end position="1235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1351"/>
            <end position="1423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="88"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="449"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="1061"/>
            <end position="1074"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1208"/>
            <end position="1229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1351"/>
            <end position="1365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1376"/>
            <end position="1389"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1405"/>
            <end position="1414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1423" mass="153777" checksum="F9C76FBDF89D490B" modified="2014-02-19" version="1">MASNPPFHLEDQTDEDFFDKLVEDDMEPVNSGHDEGGDDSDEANAFANLGISDVDATTVSENSYVGESGVEVKGELGTAESDVRLEQEGNSVPSSTSVGFDSNVDPSHDGVGVRSEDTSASAVGTSDKVGSSGVKEVGWNSFHADLNGGDGFGSYSDFFSELGDQSGNFQGNVYDNLSSQAKPGNEVQNVGLNSSGNYVQYQEGEGYESLESHTNRQGDGLNASVNHVQYQNDQNYVASSDDHTNGQDLSSSQYCEDLYPGWKYDHNSGQWYQIDGYSATATTQQSSEANTAADWTAASAGKTEISYMQQTAQSIGGTLAETGRTENVSSWSQVSQGNSGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNSTVQPSGLGQENGHASTSTFLPNDNSLYGEYGQADKYVPQSFDSQAVDGSWSGSYATNHKQGFEMYTTGTASRGDKISSGGNQQIHHSYGPSFSENKDQQHTSSSFGSVTLYNKVNHNHGLANGTFEPRSFGPSGDTGQQFNYSSTKFGEQNVFSNDFTENKKPFSYSPQSIQGGHQFSHAPDVGRSSAGRPAHALVTFGFGGKLIIMKDRNLLSSSYGSQDSVQGSVSVLNLIEVVTGSMDSLSIGNGTSDYFRALSQQSFPGPLVGGSVGSKELYKWLDERIAHFESPDLDYKKGERLRLLLSLLKIACQHYGKLRSPFGTDTLLKENDTPESAVAKLFASSKMSGTEFPQYGTPSHCLQNLASEGQMRAMALEVQNLLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSTDSSINGHPGASNMGQVSAQVGSNGMLDEWEENLAVITANRTKGDELVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKSPRTYATPEAIQRTELYEYSKVLGNSQFTLHPFQPYKLIYAYMLAEVGKVSDSLKYCQALLKSLKTGRAPELETWKQLASSLEERIRTHQQGGYAANMAPGKLVGKLLNFFDSTAHRVVGGLPPPAPSSSQGTFHGSEQHYQHMAPRVSSSQSTMAVSSLVPSASMEPISDWTADNNRMPKPNRSVSEPDIGRIPRQEMTSPDAQGKAQASGGTSRFSRFGFGSQLLQKTVGLVLKPRPGRQAKLGEKNKFYYDEKLKRWVEEGAALPAEEAALPPPPPTTAAFQNGSTEYNLKSALKTESSPPLEGSNTRISSPELSPGMPPIPPSSNQFSARGRMGVRSRYVDTFNQGGGNSANLFQSPSVPSVKPALAANAKFFVPGPAPSSNEQAMEAISESNQEVSATNVDLSTSATNEWSYQDPAHVSSTAMTMQRFPSLGNIPNQGATEGSNSHFAHSRRAASWSGGLNNSYSPPNSGNIRPLEASRFMPDESSMHTPARSSSYGEDLHEVEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK06</accession>
    <name>V7CK06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">UDP-galactose/UDP-glucose transporter 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G089000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleotide-sugar transporter family. UDP-galactose:UMP antiporter (TC 2.A.7.11) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK06"/>
    <dbReference type="STRING" id="3885.V7CK06"/>
    <dbReference type="Gramene" id="ESW29668">
        <property type="protein sequence ID" value="ESW29668"/>
        <property type="gene ID" value="PHAVU_002G089000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1581">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CGAIGQV"/>
    <dbReference type="OrthoDB" id="1601at2759"/>
    <dbReference type="PhylomeDB" id="V7CK06"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005459">
        <property type="term" value="F:UDP-galactose transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005460">
        <property type="term" value="F:UDP-glucose transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013657">
        <property type="entry name" value="SCL35B1-4/HUT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35 MEMBER B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10778:SF10">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35 MEMBER B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08449">
        <property type="entry name" value="UAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0050">Antiport</keyword>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="332" mass="36946" checksum="74C77636EDB51B40" modified="2014-02-19" version="1">MEAHGGGLRRILVLAFCVAGIWSAYIYQGVLQENVSTKRFGPNGERFEHLAFLNLAQNVVCLIWSFIMITIWSSGNSGGAPWWSYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYSFPEYVCTFLVAGGVSTFALLKTSSKTISKLAHPNAPLGYGLCFLNLAFDGFTNATQDSLKARYPKTSAWGIMLGMNLWGTIYNLIYMFGWPHASGFEAVRFCRQYPEAAWDIFLYCCCGAVGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSTKQWGCVFMVFSGLSYQIYLKWEKLQRLQKKRKAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK20</accession>
    <name>V7CK20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF538 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G090100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK20"/>
    <dbReference type="SMR" id="V7CK20"/>
    <dbReference type="STRING" id="3885.V7CK20"/>
    <dbReference type="Gramene" id="ESW29683">
        <property type="protein sequence ID" value="ESW29683"/>
        <property type="gene ID" value="PHAVU_002G090100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRII">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICYEFDA"/>
    <dbReference type="OrthoDB" id="1901318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.240.10">
        <property type="entry name" value="At5g01610-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036758">
        <property type="entry name" value="At5g01610-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007493">
        <property type="entry name" value="DUF538"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31676:SF0">
        <property type="entry name" value="OS03G0210500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31676">
        <property type="entry name" value="T31J12.3 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04398">
        <property type="entry name" value="DUF538"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141562">
        <property type="entry name" value="At5g01610-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="180" mass="20078" checksum="0C3B3630A72F8DBE" modified="2014-02-19" version="1">MERALTKVSSLKVGLGNSWITKKAKEEFSNISGDISIFSNTVEEKAKWIFNKLKGKPQKGLPELLQEYNLPAGLFPLNIICYEFDATKGKLIVYLPSASEVSFKDSSVVRYATRVKGVLTRGKLSAIDGMKTKVLVWVKVTGVAVEGYKSDKLWFTAGVKKSRPKEAYDRPHDAVRVSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKD6</accession>
    <name>V7CKD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein FAR1-RELATED SEQUENCE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G101200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Putative transcription activator involved in regulating light control of development.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the FHY3/FAR1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKD6"/>
    <dbReference type="STRING" id="3885.V7CKD6"/>
    <dbReference type="Gramene" id="ESW29818">
        <property type="protein sequence ID" value="ESW29818"/>
        <property type="gene ID" value="PHAVU_002G101200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS51">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GAQSQEH"/>
    <dbReference type="OrthoDB" id="1938913at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004330">
        <property type="entry name" value="FAR1_DNA_bnd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031052">
        <property type="entry name" value="FHY3/FAR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006564">
        <property type="entry name" value="Znf_PMZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669:SF88">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31669">
        <property type="entry name" value="PROTEIN FAR1-RELATED SEQUENCE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03101">
        <property type="entry name" value="FAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00575">
        <property type="entry name" value="ZnF_PMZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="8">
        <location>
            <begin position="549"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="667" mass="77703" checksum="667DEF89DE6376F0" modified="2014-02-19" version="1">MEEVCLNSEPFFDESDDADVEGSSVAEHGLESLNSQPKNPPVPTVGLEFDSFEEVYNFYNIHAKEQGFGIRVSNSWFRSKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIRMVESRRWRIVEVVLQHNHQVSPQSKQFYKSHKKMILEASKSQPPPEPVTEVHTIKLYRTTVMDVDYNGYSNSDESRDTNFDKFKCLELREGDASAIYNYFCRMKLTDPNFFYLFDIDDDGHLKNVFWADSRSRIAHNYFNDTVTIDTTCLANKYEIPLISFVGVNHHGHSILLGCGFLGHESVDYFVWIFKAWLKCMLGRPPHVVITDQCKTLQIAVAQVFPHARHCYSLQYIMQRVPEKLGGLQGYEAIRRQMYNAVYHSLKIVEFESSWTDMIKCHGLGDNKWIQTLYKDRHLWVPVYLKDVFFVGLISTKENEGLTAFFDGYVHKHTSFKEFLDKYDLALHRKHLKEAMADLETRKESFEFKTRCNFEAQLSKVYTEEIFKKFQTEVEGMYSCFNTRQVNVNGSIITYIVKERVEVEGNEKGVKSFEVLYETTKLDIRCICSLLNYKGYLCRHALNVLNYNGVEEIPSRYILRRWTRDFKQTFNQLHASSNINTYHPVHLYTHLFNSALPVLEVGAQSQEHYMVAVKELQELLDKFDIEDNNSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKJ6</accession>
    <name>V7CKJ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH:ubiquinone reductase (non-electrogenic)</fullName>
            <ecNumber evidence="5">1.6.5.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_002G175300g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>a ubiquinone + NADH + H(+) = a ubiquinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:23152"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Mitochondrion inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Matrix side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.9" evidence="5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKJ6"/>
    <dbReference type="SMR" id="V7CKJ6"/>
    <dbReference type="STRING" id="3885.V7CKJ6"/>
    <dbReference type="Gramene" id="ESW30697">
        <property type="protein sequence ID" value="ESW30697"/>
        <property type="gene ID" value="PHAVU_002G175300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQGGLHV"/>
    <dbReference type="OrthoDB" id="3244603at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) (non-electrogenic) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000009">
        <property type="entry name" value="Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054585">
        <property type="entry name" value="NDH2-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="NADH DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706:SF13">
        <property type="entry name" value="NADH DEHYDROGENASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22366">
        <property type="entry name" value="NDH2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="12" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-0521">NADP</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="19">
        <location>
            <begin position="70"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="External alternative NADH-ubiquinone oxidoreductase-like C-terminal" evidence="20">
        <location>
            <begin position="435"/>
            <end position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00049010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00055996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF22366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW30697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="505" mass="56105" checksum="7857A057E579017D" modified="2014-02-19" version="1">MAWLRNLSTKFSTMMKASSSSSTRTPKTTYPFSFTFLSHFSTNPIEEKPCVKPIVENSGLEPTRAHEKPRVVVLGTGWAGCRLLKGLDPSVYDIVSVSPRNHMVFTPLLASTCVGTLEFRSVAEPIGRIQPAISREPGSYFFLANCTHIDAHNHMVHCETVTEGVETIAPWKFTISYDKLVIALGSQPSTFGIQGVKEHAFFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKQRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYVHVKDYIRVTLIEANEILSSFDDRLRRYATKQLTKSGVRLVRGIVKDVKAHKIVLSDGSEVPYGLLVWSTGVGPLPIIQSLDLPKAPGGRIGVDEWLRVPSVHDVFSIGDCSGFVESTGRQTLPALAQVAERQGKYLAALLNKIGKAGAGHANCAKEIEFGDPFVYKHLGSMATIGRYKALVDLRQGKEAKGLALAGFLSFFIWRSAYITRVVSWRNRFYVFINWITTVVFGRDISRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKT6</accession>
    <name>V7CKT6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transposase, Ptta/En/Spm, plant</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G108200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKT6"/>
    <dbReference type="SMR" id="V7CKT6"/>
    <dbReference type="Gramene" id="ESW29905">
        <property type="protein sequence ID" value="ESW29905"/>
        <property type="gene ID" value="PHAVU_002G108200g"/>
    </dbReference>
    <dbReference type="OMA" id="STWIDYW"/>
    <dbReference type="OrthoDB" id="1429956at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004252">
        <property type="entry name" value="Probable_transposase_24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03004">
        <property type="entry name" value="Transposase_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="364"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="364"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="374"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="385"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="413" mass="46898" checksum="B2B1F5D002E36AEF" modified="2014-02-19" version="1">MTPRGRGGGRGVRVDDISLPNTNICPSFVLPTTMESTHPIYEGPSLPTFHEQDTEHHVGESNPTSFSIEPTMNQPSPIQDSLTPDNESGNVVDQRPWLHAERGEFSPANGPFNVISRIIKQKYDEPSPTWKKVRLEVRDRWFGEFKYRWDLEQDKLIRSIFDTKASPHGQDKGTWIPQLVRATLDQHWSSTEFQNKSVIAKANRAVEKGASAYCGGSISTAAHFEKMVVKRTKKLKTGEWVNGKTRDLAEKYKKRREEAQQQQMLESESLQNSHVASIDDNEIYIDVVGAGNKKGNVYGIGVLSKRFNSSTIAHSTTSQAPIVHQIEEMREIIQKLNDELRTKHVKERTLEEKMELLMKTREEKSERMHKQDEQMQQIMQHIQMNNPISGSSNPTTSGHHQGDNIGDDSSEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL49</accession>
    <name>V7CL49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">poly(A)-specific ribonuclease</fullName>
            <ecNumber evidence="7">3.1.13.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G192700g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="17">Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Exonucleolytic cleavage of poly(A) to 5'-AMP.</text>
            <dbReference type="EC" id="3.1.13.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the CAF1 family.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.4" evidence="7"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL49"/>
    <dbReference type="SMR" id="V7CL49"/>
    <dbReference type="STRING" id="3885.V7CL49"/>
    <dbReference type="Gramene" id="ESW30912">
        <property type="protein sequence ID" value="ESW30912"/>
        <property type="gene ID" value="PHAVU_002G192700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0304">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1373717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030014">
        <property type="term" value="C:CCR4-NOT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004535">
        <property type="term" value="F:poly(A)-specific ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039637">
        <property type="entry name" value="CNOT7/CNOT8/Pop2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006941">
        <property type="entry name" value="RNase_CAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10797">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04857">
        <property type="entry name" value="CAF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0540">Nuclease</keyword>
    <keyword evidence="16" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="15" id="KW-0804">Transcription</keyword>
    <keyword evidence="14" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00025148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW30912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="275" mass="31862" checksum="10C3872F85DE2013" modified="2014-02-19" version="1">MTLTYTSVMTRSVWSYNLESEFELIRSVIALHPFISMDTEFPGVVFQSHPAFRQPKNNYDVMKANVDSMHLIQVGLTLSDCHGNLPTFGTSNRFIWEFNFCEFDVTQHPHAPHSIALLRHQGMNFDKNRKFGVSIVRFAELMMFSGLLCNNNIQWIAFHSTYDFGYMVKILSQRFFYMQPFLPTNLCDFLQLVKYFFGYRVYDVKHLIRFCPNLHGGLDKVSDSLGLDNSGRRSHHAGSDSLVTLHVFNKIKTLYFHTKFDLSKHAGVLYGLEMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLZ5</accession>
    <name>V7CLZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G149500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLZ5"/>
    <dbReference type="SMR" id="V7CLZ5"/>
    <dbReference type="STRING" id="3885.V7CLZ5"/>
    <dbReference type="Gramene" id="ESW30388">
        <property type="protein sequence ID" value="ESW30388"/>
        <property type="gene ID" value="PHAVU_002G149500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RE27">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTRYQFG"/>
    <dbReference type="OrthoDB" id="1902708at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677">
        <property type="entry name" value="AP2 DOMAIN CLASS TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677:SF146">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="48"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="18"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW30388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="400" mass="44372" checksum="EF991DA6E8F7B562" modified="2014-02-19" version="1">MEEAMRRLNGVAPILGSDPKESAVGENPKRSTAVNKRTLREDGSGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPQASSATTEHFFHSFNNNNFIKHSPSLPFTNHRSRHSTGSAMCFDHPSAVDFSYSNPRNPSSTLNMLLLRDLINSSSNNPSLLSSSTHNFHDQFYNKGASTFSSLPTVSSSSSSPLFPSYSVNYPFEGSSSVNVNTLCGTNFTEKGDDDDSGSGFFSRESSDSGLLEEIVNKFLPKTKPSKCESLPKMEVFRNPQESLLPSLISESTLVSTVQCSDDTKKGFQKNESFGVSFDHQGFPMQKFDSFNGFDSVQGMALGNEHTMANHAENCIVEDVFQYQELLNSFAIRMQNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM28</accession>
    <name>V7CM28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Fibronectin type III-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G142900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM28"/>
    <dbReference type="STRING" id="3885.V7CM28"/>
    <dbReference type="Gramene" id="ESW30315">
        <property type="protein sequence ID" value="ESW30315"/>
        <property type="gene ID" value="PHAVU_002G142900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ55">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HMAIGTT"/>
    <dbReference type="OrthoDB" id="47059at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046556">
        <property type="term" value="F:alpha-L-arabinofuranosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009044">
        <property type="term" value="F:xylan 1,4-beta-xylosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031222">
        <property type="term" value="P:arabinan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1700:FF:000001">
        <property type="entry name" value="probable beta-D-xylosidase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.300:FF:000004">
        <property type="entry name" value="probable beta-D-xylosidase 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1700">
        <property type="entry name" value="Glycoside hydrolase family 3 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="entry name" value="Glycoside hydrolase, family 3, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044993">
        <property type="entry name" value="BXL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026891">
        <property type="entry name" value="Fn3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002772">
        <property type="entry name" value="Glyco_hydro_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036881">
        <property type="entry name" value="Glyco_hydro_3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42721:SF1">
        <property type="entry name" value="BETA-D-XYLOSIDASE 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42721">
        <property type="entry name" value="SUGAR HYDROLASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14310">
        <property type="entry name" value="Fn3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01915">
        <property type="entry name" value="Glyco_hydro_3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01217">
        <property type="entry name" value="Fn3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52279">
        <property type="entry name" value="Beta-D-glucan exohydrolase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756268" description="Fibronectin type III-like domain-containing protein" evidence="7">
        <location>
            <begin position="29"/>
            <end position="774"/>
        </location>
    </feature>
    <feature type="domain" description="Fibronectin type III-like" evidence="8">
        <location>
            <begin position="696"/>
            <end position="766"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW30315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="774" mass="84911" checksum="E8A864FB82F907A9" modified="2014-02-19" version="1">MRKQWAWSSMMMLLLMFFLVSEIATTRSSDYACKLPHHSYPFCDASHPTLTRARSLVSLLTLPEKIQLLSDNASSIPRLGIPAYEWWSESLHGIAPNGPGVSFNGTIPSATGFPQVILSAASFNRSLWFRTAAAIAREARAMFNVGQAGLTFWAPNINLFRDPRWGRGQETPGEDPMLSSAYSVEYVRGLQGLSGIQEAVGDDDDDDDDALMVSACCKHFTAYDLDKWKQFARYNFNAVVSQQDMEDSYQPPFRSCIQQGKASCLMCSYNEVNGVPACASEELLGLARDKWGFKGYITSDCDAVATVYEYQNYTKSSEDAVADVLKAGLDTDCGTFMLRHTKSAIEQGKVKEEDIDRALLNLFSVQLRLGLFDGDPVRGRFGKLGPKDVCTPEHKTLALEAARQGIVLLKNDKKFLPLNRDIGASLAVIGPMATTTKLGGDYSGIPCSLTSIYEGLREFAERISFALGCHDVSCESDDGFGEAVHTAKQADFVVIVVGLDGTQETEDHDRVSLLLPADASKNPVILVLIGGGPLDVSFAKENKKIASILWVGYPGEAGGKALAEIIFGEFNPVGRLPMTWYPEAFTNVPMNDMNMRADPSRGYPGRTYRFYTGSRVYGFGHGLSYSHFSYNFLSAPSEISLSRITKDGFRKRLLHQAGKEVNGVDYIPINELQNCNSFSFSVRISVTNLGDLDGGHVVMLFSKGPKVVDGSPETQLVGFSSLHTVSNKSTDTSILVHPCEHLSFADEEGKRILPMGPHTLSVGDVEHIVSIQMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN40</accession>
    <name>V7CN40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G180900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN40"/>
    <dbReference type="SMR" id="V7CN40"/>
    <dbReference type="Gramene" id="ESW30768">
        <property type="protein sequence ID" value="ESW30768"/>
        <property type="gene ID" value="PHAVU_002G180900g"/>
    </dbReference>
    <dbReference type="OMA" id="ENISMDR"/>
    <dbReference type="OrthoDB" id="884464at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246:SF64">
        <property type="entry name" value="C2 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246">
        <property type="entry name" value="INGRESSION PROTEIN FIC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="20416" checksum="BDCD3469354AEE15" modified="2014-02-19" version="1">MEAKQHKLTLEITLMSGENISVDRNSIAEKAYVVVRAESLNCCTTKMVNGDDGMHAWNEKMLLEVPSYARSVTFEVQSKKFKGVRPVGVARIALSDLLIDKNDNVLSESVSQMFCYGLRNWEGRRNGIIHFSVRVMNNLSSETKQEKDIKMMKFREIENGVIGFHVNHKKPRNVVIGIPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN47</accession>
    <name>V7CN47_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G181700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN47"/>
    <dbReference type="Gramene" id="ESW30778">
        <property type="protein sequence ID" value="ESW30778"/>
        <property type="gene ID" value="PHAVU_002G181700g"/>
    </dbReference>
    <dbReference type="OMA" id="CYLRIVT"/>
    <dbReference type="OrthoDB" id="1922339at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="AntiFam" id="ANF00025">
        <property type="entry name" value="Antisense to 23S rRNA"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="75" mass="8803" checksum="EF3DD654B999C502" modified="2014-02-19" version="1">MSISPSLCYVFRAGRNLSDKKFCYLRIVTITVVVHRDFSCRLPYHQVTNFLDLSALGRRQPAYMVLRLCKDLCFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNF3</accession>
    <name>V7CNF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G154000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNF3"/>
    <dbReference type="SMR" id="V7CNF3"/>
    <dbReference type="Gramene" id="ESW30451">
        <property type="protein sequence ID" value="ESW30451"/>
        <property type="gene ID" value="PHAVU_002G154000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZJ7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QGNEEPD"/>
    <dbReference type="OrthoDB" id="1932364at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045277">
        <property type="entry name" value="DRE1A-I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839:SF85">
        <property type="entry name" value="AP2_ERF DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="9">
        <location>
            <begin position="5"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW30451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="168" mass="18512" checksum="6537D48E83765127" modified="2014-02-19" version="1">MRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPTPEMAATAYDVAALALKGDAAVLNLPHSVTKYQIPATNSPADIRTAASAAAAMMKSETEASHNIASQTEATHTNYASTWWFENNFLDEEAIFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWSYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPS4</accession>
    <name>V7CPS4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G195200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPS4"/>
    <dbReference type="Gramene" id="ESW30941">
        <property type="protein sequence ID" value="ESW30941"/>
        <property type="gene ID" value="PHAVU_002G195200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10407248at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="103"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="129" mass="14628" checksum="D20A5D27216CA808" modified="2014-02-19" version="1">MAKKDYGSDKFATQKSFNNYQDGSQDFTKVVITSRRIEASFNNKGSGFQNLKGLKIQCDDKSIWDSFQEVALFGMDKLFNYDQNGSQTFLGFTFLKYLQTSSANRMGGMDPNPNPETKTKKTKTKKSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQE2</accession>
    <name>V7CQE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Vacuolar protein 14 C-terminal Fig4-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G321100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VAC14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQE2"/>
    <dbReference type="SMR" id="V7CQE2"/>
    <dbReference type="STRING" id="3885.V7CQE2"/>
    <dbReference type="Gramene" id="ESW32422">
        <property type="protein sequence ID" value="ESW32422"/>
        <property type="gene ID" value="PHAVU_002G321100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0212">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CFLYDIF"/>
    <dbReference type="OrthoDB" id="5574975at2759"/>
    <dbReference type="PhylomeDB" id="V7CQE2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010008">
        <property type="term" value="C:endosome membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070772">
        <property type="term" value="C:PAS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006661">
        <property type="term" value="P:phosphatidylinositol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:001082">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000411">
        <property type="entry name" value="protein VAC14 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000169">
        <property type="entry name" value="protein VAC14 homolog isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021133">
        <property type="entry name" value="HEAT_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026825">
        <property type="entry name" value="Vac14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021841">
        <property type="entry name" value="VAC14_Fig4p-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16023:SF0">
        <property type="entry name" value="PROTEIN VAC14 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16023">
        <property type="entry name" value="TAX1 BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12755">
        <property type="entry name" value="Vac14_Fab1_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11916">
        <property type="entry name" value="Vac14_Fig4_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50077">
        <property type="entry name" value="HEAT_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="HEAT" evidence="5">
        <location>
            <begin position="92"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="Vacuolar protein 14 C-terminal Fig4-binding" evidence="7">
        <location>
            <begin position="429"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="671"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="678"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="689"/>
            <end position="700"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF11916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="719" mass="80747" checksum="1B816F5615AE8550" modified="2014-02-19" version="1">MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLATAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELRALKADPAEAFDVGAILSIARRQLSSESEGTRIEALHWMSTLLIKYRNEVLQYLNDIFDTLLKALSDPSDQVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRYLLKQSLVDPAGKDLYVSLYASWCHSPMAIISLCLLAQAYQHASSVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYHFLQNMSGGSQISEDGDMTLDRGNSLNGINFSARLQQFQQMQHQHRVHLKIQTSKYSSSSKEAQRHEEPKRPQLSEVNVVAPSRSSKRAQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQF0</accession>
    <name>V7CQF0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial</fullName>
            <shortName evidence="10">Glu-AdT subunit B</shortName>
            <ecNumber evidence="10">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">GATB</name>
        <name evidence="13" type="ORF">PHAVU_002G322100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="function">
        <text evidence="10">Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-aspartyl-tRNA(Asn) + L-glutamine + ATP + H2O = L-asparaginyl-tRNA(Asn) + L-glutamate + ADP + phosphate + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>L-glutamyl-tRNA(Gln) + L-glutamine + ATP + H2O = L-glutaminyl-tRNA(Gln) + L-glutamate + ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Subunit of the heterotrimeric GatCAB amidotransferase (AdT) complex, composed of A, B and C subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Mitochondrion</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Plastid</location>
            <location evidence="10">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the GatB/GatE family. GatB subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQF0"/>
    <dbReference type="SMR" id="V7CQF0"/>
    <dbReference type="STRING" id="3885.V7CQF0"/>
    <dbReference type="Gramene" id="ESW32432">
        <property type="protein sequence ID" value="ESW32432"/>
        <property type="gene ID" value="PHAVU_002G322100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2438">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARKWWMG"/>
    <dbReference type="OrthoDB" id="1722066at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030956">
        <property type="term" value="C:glutamyl-tRNA(Gln) amidotransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070681">
        <property type="term" value="P:glutaminyl-tRNAGln biosynthesis via transamidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032543">
        <property type="term" value="P:mitochondrial translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.410:FF:000001">
        <property type="entry name" value="Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.150.380:FF:000001">
        <property type="entry name" value="Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.380">
        <property type="entry name" value="GatB domain, N-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00121">
        <property type="entry name" value="GatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018027">
        <property type="entry name" value="Asn/Gln_amidotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004413">
        <property type="entry name" value="GatB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042114">
        <property type="entry name" value="GatB_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017958">
        <property type="entry name" value="Gln-tRNA_amidoTrfase_suB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00133">
        <property type="entry name" value="gatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004012">
        <property type="entry name" value="PRK05477.1-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004014">
        <property type="entry name" value="PRK05477.1-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659:SF0">
        <property type="entry name" value="GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT B, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02637">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00845">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="GatB/YqeY motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="Glutamine synthetase/guanido kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01234">
        <property type="entry name" value="GATB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="3 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0934">Plastid</keyword>
    <keyword evidence="6 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Asn/Gln amidotransferase" evidence="12">
        <location>
            <begin position="397"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="33"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="33"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="46"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="548" mass="61083" checksum="8FB3495846AA245B" modified="2014-02-19" version="1">MASAIFRSLQVHPFLLYPTTLLRRRNGVYHLTTKATQSQTDTQPRQPQTKVSTSSTQSKKLDKIPKNYEAIIGIETHVQLSTLTKAFCGCPYHYGSPPNSSICPICMGLPGALPVLNSKVIEFAVKLGLALNCNLAFNSKFDRKQYFYPDLPKGYQISQFDVPIASAGFVDVDIPVEFGGGHKRFGITRVHMEEDAGKLLHAENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSSVSRAIDFEIARQVQLHSQGQEDQIVQETRLWEEGSQRTITMRKKEGLADYRYFPEPDLPAVILAQEYVDDIIKSLPELPEIKRRRYEQMGLSMQDVLFLANDKNIAEFFDATLAKGADPKLVANWIMSDIAAFMKNEKLTINEIRLTPEELSELIASIKGGTISGKIGKEVLFELLAKGGTVKELIEKKDLVQIVDPVEIEKMVEKVIAENPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNRILLEKLSSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR15</accession>
    <name>V7CR15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Storage protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G259900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR15"/>
    <dbReference type="STRING" id="3885.V7CR15"/>
    <dbReference type="Gramene" id="ESW31695">
        <property type="protein sequence ID" value="ESW31695"/>
        <property type="gene ID" value="PHAVU_002G259900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQAA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTKKREN"/>
    <dbReference type="OrthoDB" id="9985979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007877">
        <property type="entry name" value="DUF707"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31210:SF52">
        <property type="entry name" value="LYSINE KETOGLUTARATE REDUCTASE TRANS-SPLICING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31210">
        <property type="entry name" value="OS06G0731900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05212">
        <property type="entry name" value="DUF707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="388" mass="44579" checksum="A4768816926ED501" modified="2014-02-19" version="1">MVTARSFAVRRPNESMRHVLILFVGGFLGLIIGLSLPPLSITKLNLPYGLLHLSCVQKKYIDSSTTSQNQFQSDPTKIWVPTNPRGAERLAPGIVKAESDLFLRRLSGVPSEDLTFIPKYLVTFTVGYEQRKNIDAAVKKFSKDFTILLFHYDGRTTEWDEFEWSKQAIHVSVPKQTKWWYAKRFLHPDIVAPYDYIFMWDEDLGVENFNAEEYLKLVRKYGLEISQPALEPSKSTKGVCWNMTKKRENSEVHKEAVEAGRCRFPLLPPCAAFVEIMAPVFSRSAWRCVWYMIQNEFVHGWGLDFSFRKCVEPAHEKIGVVDAQWIVHQGIPSLGNQGEAQTTGKPAWRAVKERCGMEWRMFQGRLTNAEKGYYKSKGIDFSTLLLHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSF5</accession>
    <name>V7CSF5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="2">Glutaredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G300200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSF5"/>
    <dbReference type="SMR" id="V7CSF5"/>
    <dbReference type="Gramene" id="ESW32180">
        <property type="protein sequence ID" value="ESW32180"/>
        <property type="gene ID" value="PHAVU_002G300200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2824">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NAIQEPW"/>
    <dbReference type="OrthoDB" id="423313at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd03031">
        <property type="entry name" value="GRX_GRX_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000273">
        <property type="entry name" value="Glutaredoxin family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45669:SF7">
        <property type="entry name" value="F1N19.7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45669">
        <property type="entry name" value="GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23733">
        <property type="entry name" value="GRXCR1-2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="2">
        <location>
            <begin position="198"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="37670" checksum="614C92DAC3FD4C20" modified="2014-02-19" version="1">MGCAASKGVDVAAVPYRPPPTSLAVFDINAIEEPWLKHLNEKTTQVHKDKTPLPAPILHKLEMLDATDAPQSWDEVSKTLQDLKPVITKPPPTSPPQPPPQPQPQPPQKTNSFHTLEELDANTKPKPKPEAVKPETAKPAAVVNVNVARGSKLKDNVFLVRDRLEREKDEKESTFERLRRDPLSALPEKCPPGGSETVVVYTTSLRGVRKTFEDCNRVRDVLETHRVVFDERDVSLHGDFLREVKELVGEAVALPRVFVKGRYVGGLEELVELNETGRLGRILRATRVERGIGRQTCGGCGGARFVPCLECGGSCKVLVNGVDKQKCPNCNENGLVHCPSCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSK3</accession>
    <name>V7CSK3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G046500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSK3"/>
    <dbReference type="STRING" id="3885.V7CSK3"/>
    <dbReference type="Gramene" id="ESW33142">
        <property type="protein sequence ID" value="ESW33142"/>
        <property type="gene ID" value="PHAVU_001G046500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXWM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHKPNSH"/>
    <dbReference type="OrthoDB" id="1933825at2759"/>
    <dbReference type="PhylomeDB" id="V7CSK3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044246">
        <property type="entry name" value="ZFP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287:SF17">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="8">
        <location>
            <begin position="108"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="15"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="288" mass="31536" checksum="6992DE8736183A17" modified="2014-02-19" version="1">MEGISKKEAYFCDRPSMFSSAPEAPPSPSTPLQHPHEKKQVSVEEEEEENKESKHATIVDLNVSGDDSCTAEGLELNLITCLDVGSSSNANSSSEAPLGSDAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHNNNHFASMASLPLYGASNNRGGALGIQAHSMIQKPSHHHVSGFGNSYAHHHSWSRPIIEQQPGIAKLAVADFHRTKSAFSSSQTSVGRFEMVNTMMNSSAKKEISGFVARAEPRLKSNNQEEMKHLDLSLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSS2</accession>
    <name>V7CSS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G047800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSS2"/>
    <dbReference type="SMR" id="V7CSS2"/>
    <dbReference type="STRING" id="3885.V7CSS2"/>
    <dbReference type="Gramene" id="ESW33159">
        <property type="protein sequence ID" value="ESW33159"/>
        <property type="gene ID" value="PHAVU_001G047800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKERNTH"/>
    <dbReference type="OrthoDB" id="544400at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 13" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="31"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW33159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="331" mass="37656" checksum="2FFC7DA6B13046C2" modified="2014-02-19" version="1">MSMYENIESYLEQNSLAPIRYSYKEIKKMAAGFKEKLGEGGFGYVFMAKLRSGPSVAIKILNKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNTHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLVKLYPIDNSIVTMTVARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMTSKRKNLNPHADHSSQLYFPLWIYDHIREEKDADIEDVTEEENKIAKKMIIVALWCIQLKPNDRPSMNIVMEMLEGDIEDLEIPPKPILFPDETVTKDQTINSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT43</accession>
    <name>V7CT43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Vacuolar iron transporter</fullName>
            <shortName evidence="9">VIT</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G322900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Vacuolar Fe(2+) uptake transporter.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>Fe(2+)(in) = Fe(2+)(out)</text>
            <dbReference type="Rhea" id="RHEA:28486"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:28487"/>
        </physiologicalReaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Vacuole membrane</location>
            <topology evidence="1 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">The cytoplasmic metal binding domain (MBD) is located between transmembrane 2 (TM2) and transmembrane 3 (TM3).</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the CCC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT43"/>
    <dbReference type="STRING" id="3885.V7CT43"/>
    <dbReference type="Gramene" id="ESW32440">
        <property type="protein sequence ID" value="ESW32440"/>
        <property type="gene ID" value="PHAVU_002G322900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4473">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNFHHTL"/>
    <dbReference type="OrthoDB" id="73465at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140315">
        <property type="term" value="F:iron ion sequestering activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005381">
        <property type="term" value="F:iron ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005384">
        <property type="term" value="F:manganese ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030026">
        <property type="term" value="P:intracellular manganese ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02435">
        <property type="entry name" value="CCC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008217">
        <property type="entry name" value="Ccc1_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31851">
        <property type="entry name" value="FE(2+)/MN(2+) TRANSPORTER PCL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01988">
        <property type="entry name" value="VIT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0410">Iron transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <keyword evidence="4 9" id="KW-0926">Vacuole</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="62"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="193"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00044464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU369115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW32440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="247" mass="26198" checksum="D9F9EF01CF570964" modified="2014-02-19" version="1">MAATEHGISVDSERTNLLNHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANVTSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYSRELKREQEEIIAVPETEAAEVAEILAEYGIQPHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGVVPLLPYVFIPRASEAVVFSVVVTLFALLVFGYAKGHFTGNKPFRSALETALIGAIASAAAFGLAKAFHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT61</accession>
    <name>V7CT61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">U-box domain-containing protein</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G331800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT61"/>
    <dbReference type="SMR" id="V7CT61"/>
    <dbReference type="Gramene" id="ESW32553">
        <property type="protein sequence ID" value="ESW32553"/>
        <property type="gene ID" value="PHAVU_002G331800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS2D">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSHDERT"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000442">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF119">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="6">
        <location>
            <begin position="27"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW32553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="444" mass="49892" checksum="10C83BE8F1B06308" modified="2014-02-19" version="1">MVVGWRRLRRGKKNKEKKEEKVEEEVVTPNHFQCPISLELMKDPVTLCTGITYDRQSIETWFDQGRFTCPLTNHLLSNFDLIPNHTLRIIIQDWCVENQRCGVQRIPTPRVPITPNDVHHLLLLLHAKASRLDQDACLQSVHKIQRLGAESQRNMRCLVDNGAPTALASAFHAFANANDSVERNGDVSVLRQILSALNSMFSTQLEEEAIQHLGSPPSLRCIVSFLRRQDLSMKENSIVALKHLLSFGHHQHLEALVQIEGIHQLLLQFLNPRIFSPTIVKASLAVVWYLVSSSSPCTHKMRLKFIELGMVCVVLDILVDSERSLCEKGLGVLDSLCACEEGREKAYGNALAIPLLVKKLLRVSSLGSDHSVCAIWRLCKFGEEMVVVEALQVGAFQKLLLVLQVGCADETKEKATQLLKLLNPYRDAAKKCIDSDFNNLKTSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUC3</accession>
    <name>V7CUC3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G025200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUC3"/>
    <dbReference type="SMR" id="V7CUC3"/>
    <dbReference type="STRING" id="3885.V7CUC3"/>
    <dbReference type="Gramene" id="ESW32880">
        <property type="protein sequence ID" value="ESW32880"/>
        <property type="gene ID" value="PHAVU_001G025200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HTEAIRN"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000060">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000344">
        <property type="entry name" value="Transcription factor MYB44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050560">
        <property type="entry name" value="MYB_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614">
        <property type="entry name" value="MYB PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614:SF190">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="7"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="7"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="59"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="64"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="124"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="170"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="7">
        <location>
            <begin position="202"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW32880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="276" mass="29885" checksum="CCC7F6FFB0B706F2" modified="2014-02-19" version="1">MASGSRDMDRVKGPWSPEEDEALQRLVQALGPRNWTVISKSIPGRSGKSCRLRWCNQLSPEVEHRPFSPEEDDAIVRAHGRFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSAVSLDVTDRPPLKRSASVGAGYLNPSSPSGSELSDPGQPALSTPSASARCRPNLMETASSPSDPATSLSLCLPGFGSEPSLVAAPRPASSPPPVSPPPPPPAAVEERGKQLFNAEFLRVMQEMIRKEVRSYMSGMELKNGLRIQTEAIGNAVVKRMGISNIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUD4</accession>
    <name>V7CUD4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DM2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G094300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUD4"/>
    <dbReference type="SMR" id="V7CUD4"/>
    <dbReference type="STRING" id="3885.V7CUD4"/>
    <dbReference type="Gramene" id="ESW33729">
        <property type="protein sequence ID" value="ESW33729"/>
        <property type="gene ID" value="PHAVU_001G094300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2570">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPLYPKF"/>
    <dbReference type="OrthoDB" id="10263741at2759"/>
    <dbReference type="PhylomeDB" id="V7CUD4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10568">
        <property type="entry name" value="SWIB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.245.10">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019835">
        <property type="entry name" value="SWIB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036885">
        <property type="entry name" value="SWIB_MDM2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003121">
        <property type="entry name" value="SWIB_MDM2_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13844">
        <property type="entry name" value="SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02201">
        <property type="entry name" value="SWIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00151">
        <property type="entry name" value="SWIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47592">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51925">
        <property type="entry name" value="SWIB_MDM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DM2" evidence="2">
        <location>
            <begin position="251"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="471" mass="53254" checksum="9F65B62D3C70C933" modified="2014-02-19" version="1">MSMYNNYNSMKPLGASSSGTQHPQIAPGQYPQSQAHAIVQAQFQAQLQAHGLSFAPNAKRFPPKPPVHTATPLKQTESVPGPRRKKHKQNEKQLPEKALAILPESALYAQLLDVEVRVDAALARKKVDIQEAVKNPPFIQKTLRIFVFNTFANQNVDSSAPTWTLKIVGRILEDGEESEQAGVAAHRMPPLYPKFSAFFKRVTISLDKRLYPENHVITWENSRSSATHEGFEVKRKGDKEFSAQIRLEMNYVPEKFMLSPVLRELLGIQVDTRARIVSAIWHYVKARKLQNQNDPSYFHCDLALQKVFGEDKVRFSMVSQKISQHLFPPQVILLEHMIKLSGNSPVGSACYDVMVDVPFPMQRELNALVANVERNKEIDACDESICGIIRKIHEHRRRRAFFVGFSQSPLEFIKALVESQNKDLKVLLGESGHNADKERKSDFFKQPWVEDAIVRYLNRKPAAGSNAPGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWH1</accession>
    <name>V7CWH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G085500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWH1"/>
    <dbReference type="SMR" id="V7CWH1"/>
    <dbReference type="STRING" id="3885.V7CWH1"/>
    <dbReference type="Gramene" id="ESW33625">
        <property type="protein sequence ID" value="ESW33625"/>
        <property type="gene ID" value="PHAVU_001G085500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ2A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="551431at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd04873">
        <property type="entry name" value="ACT_UUR-ACR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11443">
        <property type="entry name" value="bHLH_AtAMS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000066">
        <property type="entry name" value="BHLH transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051358">
        <property type="entry name" value="TF_AMS/ICE1/BHLH6-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31945:SF129">
        <property type="entry name" value="TRANSCRIPTION FACTOR SCREAM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31945">
        <property type="entry name" value="TRANSCRIPTION FACTOR SCREAM2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="8">
        <location>
            <begin position="234"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="168"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="427" mass="46961" checksum="CACAA4FAC5EF8FC9" modified="2014-02-19" version="1">MMEGYTLPAPPTEEDAPPPSWGRPNSQEEDIAIALGAPLTFKSMLQQQPQPQQPQLDSFFNFNINSATSIPFVPSMESFPPLDPFSPSLPPPPFFNTNTNTLPFDPGFDMGLETGLHSSCPPLFSQLQQGFKFGELEALTAPGNVPFLDGAKGDNPLERVQPTLYRKRRGTAEIPGLETVRRKGRKWEEGEGEEGSSADVDGSGLNYESDENDNGNNGLKGSENGGDHKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEMTSAGSSLPPSTSTSFQPLTPTLPTLPCRVKEELYPGALPSPKNQAAKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFKAEQCREGQDVLPEQIKAVLLDSAGFHGMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWK2</accession>
    <name>V7CWK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G094900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWK2"/>
    <dbReference type="STRING" id="3885.V7CWK2"/>
    <dbReference type="Gramene" id="ESW33738">
        <property type="protein sequence ID" value="ESW33738"/>
        <property type="gene ID" value="PHAVU_001G094900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZC6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSAYEYH"/>
    <dbReference type="OrthoDB" id="2012779at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36712">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36712:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="122" mass="14007" checksum="EBDDCED798AC89B7" modified="2014-02-19" version="1">MRLYEELREIVKIQKFRRLVSYTGFYCFATLISYAYVSNTTRAGYSRADQFYASYPAGTELLTDTTKLYKAALGNCFEAEDWGPFEFCIMAKHFDRQGKSPYAYHAQYMAHLLSLGQLDGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXH4</accession>
    <name>V7CXH4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4283 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G122500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXH4"/>
    <dbReference type="SMR" id="V7CXH4"/>
    <dbReference type="Gramene" id="ESW34078">
        <property type="protein sequence ID" value="ESW34078"/>
        <property type="gene ID" value="PHAVU_001G122500g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1418158at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW34078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="291" mass="33648" checksum="8F0B428014279A8E" modified="2014-02-19" version="1">MWKVFRRWGRVLDVFISRKLNSRNRKFGLVRFQGVEDMYALEKKLDVIWIGTWKLRANLPKYSRFKRVSKKLGEQPHSTGRLREQVQQKKRIMQTGTVQRKGEQAQQQLTFAEVVLQIEVKSSSWLDNCYVERLLKAPNMQLVKESFVLGGFGFVRLRYLVEKFVLLSCDEEGLIGKLVEENKEWFAGMFVSATEAREVLEYVRLRVSISIGISLCEKKEVSINDFSYSISFEEETYESVLEFVVNSEDDGGRERLVSKGRRGDDGSVFGGADRTYPCNKECSRGEWSGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXV2</accession>
    <name>V7CXV2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G092500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXV2"/>
    <dbReference type="STRING" id="3885.V7CXV2"/>
    <dbReference type="Gramene" id="ESW33711">
        <property type="protein sequence ID" value="ESW33711"/>
        <property type="gene ID" value="PHAVU_001G092500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4J2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VGVHMYI"/>
    <dbReference type="OrthoDB" id="652307at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021775">
        <property type="entry name" value="DUF3339"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128">
        <property type="entry name" value="OS05G0103400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128:SF51">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11820">
        <property type="entry name" value="DUF3339"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="7547" checksum="F1FCA342728CD059" modified="2014-02-19" version="1">MGDWGPVFVSVVLFILLTPGLLVQIPGRGSFIEFGNFQTSGLSILIHAILYFALVCIFMLAIGIHMYMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZP6</accession>
    <name>V7CZP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Inosine nucleosidase</fullName>
            <ecNumber evidence="9">3.2.2.2</ecNumber>
            <ecNumber evidence="10">3.2.2.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Xanthosine nucleosidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">NSH1</name>
        <name evidence="14" type="ORF">PHAVU_001G188700g</name>
    </gene>
    <organism evidence="14 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <reference evidence="15" key="3">
        <citation type="journal article" date="2021" name="Front. Plant Sci." volume="12" first="0" last="651015">
            <title>Nucleoside Metabolism Is Induced in Common Bean During Early Seedling Development.</title>
            <authorList>
                <person name="Delgado-Garcia E."/>
                <person name="Piedras P."/>
                <person name="Gomez-Baena G."/>
                <person name="Garcia-Magdaleno I.M."/>
                <person name="Pineda M."/>
                <person name="Galvez-Valdivieso G."/>
            </authorList>
            <dbReference type="PubMed" id="33841480"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>inosine + H2O = hypoxanthine + D-ribose</text>
            <dbReference type="Rhea" id="RHEA:16657"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:47013"/>
            <dbReference type="EC" id="3.2.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>uridine + H2O = D-ribose + uracil</text>
            <dbReference type="Rhea" id="RHEA:15577"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:47013"/>
            <dbReference type="EC" id="3.2.2.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>xanthosine + H2O = D-ribose + xanthine</text>
            <dbReference type="Rhea" id="RHEA:27994"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:18107"/>
            <dbReference type="ChEBI" id="CHEBI:47013"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IUNH family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.2" evidence="9"/>
    <dbReference type="EC" id="3.2.2.3" evidence="10"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="MW435747">
        <property type="protein sequence ID" value="QWS72097.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZP6"/>
    <dbReference type="SMR" id="V7CZP6"/>
    <dbReference type="STRING" id="3885.V7CZP6"/>
    <dbReference type="Gramene" id="ESW34878">
        <property type="protein sequence ID" value="ESW34878"/>
        <property type="gene ID" value="PHAVU_001G188700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2938">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WVGVETK"/>
    <dbReference type="OrthoDB" id="432381at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047724">
        <property type="term" value="F:inosine nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045437">
        <property type="term" value="F:uridine nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006152">
        <property type="term" value="P:purine nucleoside catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042454">
        <property type="term" value="P:ribonucleoside catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02650">
        <property type="entry name" value="nuc_hydro_CaPnhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.245.10:FF:000004">
        <property type="entry name" value="Probable uridine nucleosidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.245.10">
        <property type="entry name" value="Ribonucleoside hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001910">
        <property type="entry name" value="Inosine/uridine_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023186">
        <property type="entry name" value="IUNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036452">
        <property type="entry name" value="Ribo_hydro-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12304">
        <property type="entry name" value="INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12304:SF1">
        <property type="entry name" value="URIDINE NUCLEOSIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01156">
        <property type="entry name" value="IU_nuc_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53590">
        <property type="entry name" value="Nucleoside hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 15" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inosine/uridine-preferring nucleoside hydrolase" evidence="13">
        <location>
            <begin position="22"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00050806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00050902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00051638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00066757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00078894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00081651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW34878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="QWS72097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="334" mass="35750" checksum="6013232982EBB329" modified="2014-02-19" version="1">MASQVNSPNGAVNGVLGNAEKLIIDTDPGIDDSMAILMAFQSPDVEVLGLTSIFGNAMTEVSTRNALLLCEIAGRENVPVAQGSSEPLKGGTPRIADFVHGEDGLGNTFLPLPKGKKIEKSACEFLVEKVSENPGEVSVLALGPLTNVALAIKRDSSFASKVKRIVILGGSFFALGNVNPAAEANIYGDPEAADVVFTSGADIVVVGINITTQVQFTDADLIQLKESQGKYAPFLSDICKFYRDWHAKSDGVHGIFLHDPVSFVALVRPDLFTYQKGVVRVETQGICVGHTLLDQGLKNWNMSNPWTGYSPVSVVWTVDVEGVVDYIKELVMKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0P0</accession>
    <name>A0ACC3P0P0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L004443</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="223" mass="25111" checksum="83A368753A336C63" modified="2026-01-28" version="1">MESRTSAGREPSGSLSVSRWSPKKEQIAILESFYKQGIRTPNTEQIKEITSRLSAYGHIQGKNVFYWFQNHKARQRQKQKQQCIAYSNSFLHASQPIGQTVVCAPFYPQQCGMNFYPQPGKIVPAGGVIETVVPFGMLKMCDVQQKQLQQRVQTGYNYSISDSKTLTLFPLHPTGILEEKTTNQVSSHASLVSVDVTDTCHGSLSVVEDSRPEKQQFLDFLTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AD60</accession>
    <name>V7AD60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G012400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AD60"/>
    <dbReference type="SMR" id="V7AD60"/>
    <dbReference type="Gramene" id="ESW03419">
        <property type="protein sequence ID" value="ESW03419"/>
        <property type="gene ID" value="PHAVU_011G012400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRGK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LYIHSRT"/>
    <dbReference type="OrthoDB" id="438224at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000031">
        <property type="entry name" value="2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48420">
        <property type="entry name" value="NON-HAEM DIOXYGENASE N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48420:SF1">
        <property type="entry name" value="NON-HAEM DIOXYGENASE N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="2">
        <location>
            <begin position="214"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW03419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="42632" checksum="C6E942F336ADEF82" modified="2014-02-19" version="1">MQTLILYRFLHPISQNAVVPRYAMSRSSEASFPTITTTSISFSQLQDKNADLSLKIEEGFGTNGLGILSVTDVPGYPSLRRNLLQLAPRLAKLPKEVKEDLEDPNSRYNFGWSHGKEKLESGKPDILKGSYYANPILDTPTTEVSLIQRYPSYCGSNIWPRNALPELEVAFKALGMLIFDVGLMLAYHCDQYVSKGMKTHKDEGLESILRRSRCHKGRLLYYFPSQQGDPDGNSLSSWCGWHTDHGSLTGLTCGMFTRDGVEMSCPDSAAGLYIRTRSDQIVKVVFGKDDIAYQIGETTQILSGSYLCATPHCVQAPKGNKSSGIERSTFALFMQPDWDEKLNFPEEIHIHKELIPSNASLTFGEYSEMLLDKYYHQKLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADS1</accession>
    <name>V7ADS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="2">PPIase</shortName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G034400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADS1"/>
    <dbReference type="SMR" id="V7ADS1"/>
    <dbReference type="STRING" id="3885.V7ADS1"/>
    <dbReference type="Gramene" id="ESW03692">
        <property type="protein sequence ID" value="ESW03692"/>
        <property type="gene ID" value="PHAVU_011G034400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEMSFWV"/>
    <dbReference type="OrthoDB" id="193499at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016018">
        <property type="term" value="F:cyclosporin A binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.100.10:FF:000030">
        <property type="entry name" value="Peptidyl-prolyl cis-trans isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF449">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="3">
        <location>
            <begin position="59"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW03692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="234" mass="25757" checksum="C4A00AAB5836DCA0" modified="2014-02-19" version="1">MCRTIAFLVHPRVLLLFLVLSIFLIFTYTGSTTTYDSTTPKLVVEEKIEEVHEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFIALCTGRKEKSENGVKLHYKGGTPFHRIVSGFVIQGGDIVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKASWLDGEHVVFGKVVEGMDIVYAIEGGAGTYSGKPRKKVVIADSGEIPKSEWDEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFB9</accession>
    <name>V7AFB9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G056300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFB9"/>
    <dbReference type="SMR" id="V7AFB9"/>
    <dbReference type="STRING" id="3885.V7AFB9"/>
    <dbReference type="Gramene" id="ESW03970">
        <property type="protein sequence ID" value="ESW03970"/>
        <property type="gene ID" value="PHAVU_011G056300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TSESRCH"/>
    <dbReference type="OrthoDB" id="65569at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000020">
        <property type="entry name" value="Beta-glucosidase 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="GH_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF240">
        <property type="entry name" value="BETA-GLUCOSIDASE, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753315" evidence="5">
        <location>
            <begin position="26"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW03970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="514" mass="58813" checksum="FA918F89829E081A" modified="2014-02-19" version="1">MVITMNMFSLLCVFVTSSIITLTHSKAVPPILDVSYLNRSSFPKGFVFGTASASYQYEGAAREDGKGPSIWDTFTHKYPEKVKDRSTGDVTTDQYHRYKEDVGIMKGMNLDAYRFSISWPRVLPKGKLSAGVNKAGINYYNNLINQLLKNGMEPYVTLFHWDVPQALDDEYGGFLSPHIVDDFRDFAELCFKEFGDRVKHWITLNEPSTVAFDGYTVGDHAPGRCSDWQKLNCTGGDSGTEPYLVSHYLLLSHAAAANLYKTKYQESQKGLIGITLNSDWYLPASDDIADMDAARRALDFRFGWYMDPLTKGEYPTSMRHLVGNRLPRFSKEEAKQLKGSFDFLGLNHYSTFYAANAPDLRGSKPSLLKDSLANVTNQHDGRILCPLAASNWLCVYPRGLRQLLVYIKKNYNNPVIYITENGFDEFNDPTLSLEEKLLDTNRVDYLYRYLYYVKMAIRDGVKVKGYFVWSFLDNMEWNSGYTVRFGFIFVDFKNGLKRYPKLSAQWFKNFLSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGD2</accession>
    <name>V7AGD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH:ubiquinone reductase (non-electrogenic)</fullName>
            <ecNumber evidence="5">1.6.5.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_011G111300g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>a ubiquinone + NADH + H(+) = a ubiquinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:23152"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Intermembrane side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.9" evidence="5"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGD2"/>
    <dbReference type="SMR" id="V7AGD2"/>
    <dbReference type="STRING" id="3885.V7AGD2"/>
    <dbReference type="Gramene" id="ESW04624">
        <property type="protein sequence ID" value="ESW04624"/>
        <property type="gene ID" value="PHAVU_011G111300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QIPAQKD"/>
    <dbReference type="OrthoDB" id="3244603at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) (non-electrogenic) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000002">
        <property type="entry name" value="External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000008">
        <property type="entry name" value="External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054585">
        <property type="entry name" value="NDH2-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706:SF3">
        <property type="entry name" value="EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="NADH DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22366">
        <property type="entry name" value="NDH2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0521">NADP</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="20" id="KW-0732">Signal</keyword>
    <keyword evidence="12" id="KW-0809">Transit peptide</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755508" description="NADH:ubiquinone reductase (non-electrogenic)" evidence="20">
        <location>
            <begin position="33"/>
            <end position="573"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="21">
        <location>
            <begin position="374"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00049010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW04624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="573" mass="64146" checksum="DFA355C996B6D21E" modified="2014-02-19" version="1">MTVASFFKRASRVLSSSRFLLVCTLSGGGVVAFSESQTGAERPSIEANGPSKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEINFWEAECVKIDSSNKKVFCRSNIDNLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSITDEERRSILHFVVVGGGPTGVEFAAELHDYVLEDLIKLYPTAKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVETGCRVVGVDDKVITMKTKSTGDICSVPHGLVVWSTGISTLPVIRDFMKEIGQAERHVLATNEWLRVKGREDVYAIGDCSSITQRKIMDDITTIFEAADKNKSGTLTIEEFQEVMDDIILRYPQVEHYLKQKHLRDFSTLWKDLQGNESKEIDVEAFKLALSHADSQVKSLPATAQVAAQQGAYLARCFNHRDHAEEHPEGPRRFSGSGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGE8</accession>
    <name>V7AGE8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G088300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGE8"/>
    <dbReference type="SMR" id="V7AGE8"/>
    <dbReference type="STRING" id="3885.V7AGE8"/>
    <dbReference type="MEROPS" id="A01.A56"/>
    <dbReference type="Gramene" id="ESW04355">
        <property type="protein sequence ID" value="ESW04355"/>
        <property type="gene ID" value="PHAVU_011G088300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTWILIV"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="PhylomeDB" id="V7AGE8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05476">
        <property type="entry name" value="pepsin_A_like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000018">
        <property type="entry name" value="Aspartic proteinase-like protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000020">
        <property type="entry name" value="Aspartic proteinase-like protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034161">
        <property type="entry name" value="Pepsin-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF375">
        <property type="entry name" value="PEPTIDASE A1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00792">
        <property type="entry name" value="PEPSIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753693" description="Peptidase A1 domain-containing protein" evidence="12">
        <location>
            <begin position="21"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="13">
        <location>
            <begin position="77"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW04355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="52592" checksum="28160E41288882F9" modified="2014-02-19" version="1">MEVVAAVFLFAAALLSVGEGSPVTLTLERAFPSNHGVELNQLRARDSLRHRRMLQSTNYVVDFPVKGTFDPSQVGLYYTKVKMGTPPREFYVQIDTGSDVLWVSCGSCNGCPQTSGLQIQLNYFDPRSSSTSSLISCSDRRCKNGVQSSDASCSGQNNQCTYTFQYGDGSGTSGYYVSDLMHFASIFEGSLTTNSSASVVFGCSIQQTGDLTKSDRAVDGIFGFGQQGMSVISQLSSQGIAPRVFSHCLKGDNSGGGVLVLGEIVEPNIVYTPLVPSQPHYNLYLQSISVNGQPLQIDPAVFATSNNRGTIVDSGTTLSYLAEEAYTTFVNAITAAIPQSVRSVLSRGNQCYLITSSSNVDIFPQVSLNFAGGASLVLRPLDYLIQQNYIGEGSVWCIGFQKIPGESVTILGDLVLKDKIFVYDLAGQRIGWVNYDCSLPVNVSASTGRGRSEFVDAGELGGSTSLCDGPHTLIRTLFLALFMHITLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGV2</accession>
    <name>V7AGV2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_011G100000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Plays a continuous role in plant development probably in the structural organization of compartments.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ESW04500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7AGV2"/>
    <dbReference type="STRING" id="3885.V7AGV2"/>
    <dbReference type="Gramene" id="ESW04500">
        <property type="protein sequence ID" value="ESW04500"/>
        <property type="gene ID" value="PHAVU_011G100000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0712">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SILNEGM"/>
    <dbReference type="OrthoDB" id="550424at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030544">
        <property type="term" value="F:Hsp70 protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="dnaJ protein homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DnaJ subfamily A member 2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Heat shock protein DnaJ, cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ZF_CR"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0143">Chaperone</keyword>
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    <keyword evidence="3 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0488">Methylation</keyword>
    <keyword evidence="10" id="KW-0636">Prenylation</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 12" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="14">
        <location>
            <begin position="13"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="15">
        <location>
            <begin position="135"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="12">
        <location>
            <begin position="135"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="378"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="378"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
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    </evidence>
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        <source>
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    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
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    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00037547"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW04500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46544" checksum="5993F701F3319EB3" modified="2014-02-19" version="1">MFGRAPKKSDNTRYYEILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDQYGEDALKEGMGGGGGHDPFDIFSSFFGGGSPFGSGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCTGKGSKSGASMKCAGCQGTGMKVSIRHLGPSMIQQMQHACNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFRRKAEDLFVEHTLSLTEALCGFQFVLTHLDSRQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYLHFTVEFPDFLNPEQVKALEAVLPPKQPSQLTDMELDECEETTLHDVNMEDETRRRQQQAAQEAYEEDDDMPGGAQRVQCAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHP1</accession>
    <name>V7AHP1_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G150700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW05084"/>
        <property type="gene ID" value="PHAVU_011G150700g"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13085" checksum="FC12A006B04742FA" modified="2014-02-19" version="1" fragment="single">KIDELMLKNPEIAYISPNDPIGAIFGKEHLGRVRGLSYGVFPNLAFKRFTIRLSGMNYASSSETSANVEDKVVQMESELATVNIQIQTLLAYISSRKDVLEHFTAITSNLVHASINEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIA7</accession>
    <name>V7AIA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Alpha-amylase/subtilisin inhibitor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G166500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIA7"/>
    <dbReference type="SMR" id="V7AIA7"/>
    <dbReference type="STRING" id="3885.V7AIA7"/>
    <dbReference type="MEROPS" id="I03.029"/>
    <dbReference type="Gramene" id="ESW05274">
        <property type="protein sequence ID" value="ESW05274"/>
        <property type="gene ID" value="PHAVU_011G166500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0HP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIVRESH"/>
    <dbReference type="OrthoDB" id="1918435at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004866">
        <property type="term" value="F:endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd23367">
        <property type="entry name" value="beta-trefoil_STI_KPI104-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011065">
        <property type="entry name" value="Kunitz_inhibitor_STI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002160">
        <property type="entry name" value="Prot_inh_Kunz-lg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107">
        <property type="entry name" value="KUNITZ TRYPSIN INHIBITOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107:SF31">
        <property type="entry name" value="KUNITZ TYPE TRYPSIN INHIBITOR 104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00197">
        <property type="entry name" value="Kunitz_legume"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00291">
        <property type="entry name" value="KUNITZINHBTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00452">
        <property type="entry name" value="STI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50386">
        <property type="entry name" value="STI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753396" description="Alpha-amylase/subtilisin inhibitor" evidence="1">
        <location>
            <begin position="24"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="207" mass="23132" checksum="C79D97EADD40E1DA" modified="2014-02-19" version="1">MSMKLFASLSLALWLLVATPTLSQSNNRYVMDTHGDPLESDEEYFIRPAITDNGGRFTLINRNQSCPLHVGLENTDLPQGYPVRFTPFAREEDDDEVRVDRDLKVEFVEVSSTCVQSTAWKLGENDTSIGRRVIVTGLDDGTHSAGNYFRIEETQNASIYNIRWCPTEVCPTCRFICGTGGIVRENGTILFALDGSALPVVFQKKDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL83</accession>
    <name>V7AL83_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Trichome birefringence-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G1346000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PC-esterase family. TBL subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL83"/>
    <dbReference type="STRING" id="3885.V7AL83"/>
    <dbReference type="Gramene" id="ESW04896">
        <property type="protein sequence ID" value="ESW04896"/>
        <property type="gene ID" value="PHAVU_011G1346000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="630188at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016413">
        <property type="term" value="F:O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029962">
        <property type="entry name" value="TBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026057">
        <property type="entry name" value="TBL_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285:SF354">
        <property type="entry name" value="PMR5_CAS1P GDSL_SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32285">
        <property type="entry name" value="PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13839">
        <property type="entry name" value="PC-Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trichome birefringence-like C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="40" mass="4376" checksum="87630672DDC73322" modified="2014-02-19" version="1" fragment="single">YRKDAHPEGYSGVMAVDCSHWCLPGLPDTWNELLSAVLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMC1</accession>
    <name>V7AMC1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein uL4m</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G046600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMC1"/>
    <dbReference type="SMR" id="V7AMC1"/>
    <dbReference type="STRING" id="3885.V7AMC1"/>
    <dbReference type="Gramene" id="ESW06420">
        <property type="protein sequence ID" value="ESW06420"/>
        <property type="gene ID" value="PHAVU_010G046600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1624">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIENTDA"/>
    <dbReference type="OrthoDB" id="275876at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1370.10:FF:000006">
        <property type="entry name" value="50S ribosomal protein L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01328_B">
        <property type="entry name" value="Ribosomal_uL4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002136">
        <property type="entry name" value="Ribosomal_uL4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013005">
        <property type="entry name" value="Ribosomal_uL4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023574">
        <property type="entry name" value="Ribosomal_uL4_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03953">
        <property type="entry name" value="rplD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10746">
        <property type="entry name" value="50S RIBOSOMAL PROTEIN L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10746:SF6">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL4M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00573">
        <property type="entry name" value="Ribosomal_L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52166">
        <property type="entry name" value="Ribosomal protein L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="150"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00040565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW06420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="313" mass="34775" checksum="8F90889CFB6157B7" modified="2014-02-19" version="1">MAALISKRLLRCSSGSLPSLGRSYFNLPNAGSASLYNSRDVHSRVSGERLLSANCSLVRSMIRQFSTSILTPGSDEGAFPSDLLSKNTLATSERTIGLCQDLLIPVTNFHNENKGFMVLPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGKARHGTLRGPQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNMVNYYNQMEKTKKLLLVDGGPIDEKLKLSTQNLHYVNILPSIGLNVYSILLHDTLVMSRSAVTRIVERMRTPINR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMV0</accession>
    <name>V7AMV0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G181400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_011G181400g"/>
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        <property type="entry name" value="Ribonuclease Inhibitor"/>
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        <property type="entry name" value="ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE"/>
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    </dbReference>
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        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
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    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="L domain-like"/>
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        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
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        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="4">
        <location>
            <begin position="23"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
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            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1056" mass="119895" checksum="159AFEB49B320EC6" modified="2014-02-19" version="1">MAEQPMMSDVASSSNSSSMASCKKYDVFLSFRGEDTRMNFTSHLHEALKQKKVKTYIDYQLEKGDEISQGLIKAIEDSHVSIVIMSENYASSKWCLEELSKILECQKNQGQIVIPVFYNIDPSHVRKQTGSYEQAFVKHQEDLRCNKWRAALTEVANLSGWDSRNRTESKLLMDIVGDILRKLTARYPNQLKGLVGIEENYEQIESLLRIGSREVRMLGIWGMGGIGKTTLATALYAQLSPEFEGGCFLTNVRENSSRHGGLEALHKKLYTELLDNESHCFDAPLLVPQFVMHRLGHKKVFIVLDDVATYEQLEHLIEDYGLLGPGSRVIVTTRDKQIFRPNDEIYEVKKLSFHRSLELFSLTVFEEKTPKHGHEDLSRRAVSYCKGIPLALKVLGASLRRRSKEAWESELRKLKKISNKEINNVLKLSYDGLDRSQKDIFLDIACFFKGKDRDWVTNLLEACDFFAASGIEVLLDKALVTISDCNSIEMHDLIQEMGREIVDQESIKEPGRRSRLWRPEEVHEVLKHNLGTEVVECITLDTCNLNRDLNLSSNCFAKMVSLRFLDIHCSLSSTRFHVYLPSGLESLSDKLRYFYWDGFCHESLPSNFHAEDLVEIYMCRSKLKKLWDGVQNLVNLEKIYLESSGNLVEIPDLSKAEKLRSIDLSYCKSLRKLHPSLSSLPKLTMLELSGCTEIENLNVHSKYLQRLYLKGCSSLKEFSVTSHEMTILELSYTAICALPSSIKYNRKLTQLLLYGCNNFDCTQDNTNLSLVQSVPNIIGHLFCLEYLDLSGTIVENLPESIKNLSMMTLLRLNDCRKLVSLSELPPSLKILTAYNCTSLVFSQLLVFEHMLQNCTPSLSKQYYPKQFEGGCVVFPGDHIRNDCGFHTRDSSITIPYLSLPELCGFICCVIVSEGSVEGHFSCSIYQDSKQVGMDEGQLLHTTLISDHVAFLFVETCDHLSEIPFKFEFNYSQKTEKVIIKECGVFPVYASESGLKLFELESITQIFNESQSRAIGDGLTEIGVDGSNNENGNENETWLRVVRSSKSSITCSILLPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANU4</accession>
    <name>V7ANU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">LIMR family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G001200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANU4"/>
    <dbReference type="SMR" id="V7ANU4"/>
    <dbReference type="STRING" id="3885.V7ANU4"/>
    <dbReference type="Gramene" id="ESW05891">
        <property type="protein sequence ID" value="ESW05891"/>
        <property type="gene ID" value="PHAVU_010G001200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPKQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YAYCAMY"/>
    <dbReference type="OrthoDB" id="73273at2759"/>
    <dbReference type="PhylomeDB" id="V7ANU4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006876">
        <property type="entry name" value="LMBR1-like_membr_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31652">
        <property type="entry name" value="LIMR FAMILY PROTEIN DDB_G0283707-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31652:SF0">
        <property type="entry name" value="LIMR FAMILY PROTEIN DDB_G0283707-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04791">
        <property type="entry name" value="LMBR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="206"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="331"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="373"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="421"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="474"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="255"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="508" mass="56360" checksum="877EEBF9C7A275A0" modified="2014-02-19" version="1">MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVSAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDALLVFFVIPFAMFYYEGDQDKSVGKRIKSALCWMVTTAIVCALVLGILYGIIGKVDFTVRHLSSSTSSFPSTWEFNSGQQCIGNTHQCSAYTSSPASEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAESLHQEEKSASKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKLVLGVLGLIVSVAWVAHIIIYLLVDPPLSPFLNVVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMVVGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSMSVIQFCSTAFAYYAQATAAQEIFGHTFESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASK2</accession>
    <name>V7ASK2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G106900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASK2"/>
    <dbReference type="Gramene" id="ESW07161">
        <property type="protein sequence ID" value="ESW07161"/>
        <property type="gene ID" value="PHAVU_010G106900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R7R9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1730662at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053258">
        <property type="entry name" value="Ca-permeable_cation_channel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34115">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34115:SF15">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="172" mass="20150" checksum="1A5564F7B2BD2C46" modified="2014-02-19" version="1">MADGAFGMRGNALIFNTANIQICNRPIETNPGDALVAFIFFVLLPFLQLRYPENPSPFHLHPNTIWLSILSFLLYCFFTFSSNLNFGIRVNHFQTLKRVFASLSLLCLLVMLLPDTWECFAFLLYILWFMIWFIIHVLPAIKTHFMEARVQRPYTRRVVRRPLLPITSMDFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASZ4</accession>
    <name>V7ASZ4_PHAVU</name>
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        <recommendedName>
            <fullName evidence="7">THO complex subunit 5B</fullName>
        </recommendedName>
    </protein>
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        <name evidence="5" type="ORF">PHAVU_009G065600g</name>
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    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the THOC5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASZ4"/>
    <dbReference type="SMR" id="V7ASZ4"/>
    <dbReference type="STRING" id="3885.V7ASZ4"/>
    <dbReference type="Gramene" id="ESW08684">
        <property type="protein sequence ID" value="ESW08684"/>
        <property type="gene ID" value="PHAVU_009G065600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2216">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KDMECTP"/>
    <dbReference type="OrthoDB" id="20582at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000445">
        <property type="term" value="C:THO complex part of transcription export complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006406">
        <property type="term" value="P:mRNA export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019163">
        <property type="entry name" value="THO_Thoc5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13375">
        <property type="entry name" value="FMS INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13375:SF3">
        <property type="entry name" value="THO COMPLEX SUBUNIT 5 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09766">
        <property type="entry name" value="FmiP_Thoc5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="279"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="548"/>
            <end position="569"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="548"/>
            <end position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW08684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="805" mass="92231" checksum="89355F5BB8EF08D9" modified="2014-02-19" version="1">MEDGEIEEGSIGGVEEEERSSEPHKSEESPYEMLRNSKASVENIIADVLAIKKDGKPKQHLRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACTDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCKLHEKLEQQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAGLLPPALYVIYSQLFAQKEAFAEPIDLEIIGSLKDAQAFARQQAHKDTDNSTTMESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIVHVYEDEDSDSKSAKLITLRFEYLVKLNVVCVGIEGCNEGPENDILCNLFPNDTGLELPQQSAKLFVQDATTFNSQRTSRPYKWAQHLAGIDFLPEVSPLLLTEDSGAAKNENVISGLSLYRQQNRVMTVLHRIRDRRKAQLALLEQLEFLAKLDWPCLSCKIVPWAFHTPLCNLDSWSPVRLPPVPRESSSPAVIDEEEHVHEPMDADVNEHSDVTKAEPESITEDGELPTLLPNMSKLDHSTQLNLISKSIVPPLNKIRSQSFKKYDDSSDFLLDTESDLDEPAQTELEHENILSNYHDRNSVSWMHHGLKEFCLVLCRKISADESNVKLEAKIKISMEYPLRPPLFALSIRCISSGEKRDKLGLEWYNELRAMEAEVNLHILKMLPINQQNYVLAHQVSCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLGRCFRGRDRRKMISWKDMKFNSRCPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT49</accession>
    <name>V7AT49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transposase-associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G078200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT49"/>
    <dbReference type="Gramene" id="ESW08827">
        <property type="protein sequence ID" value="ESW08827"/>
        <property type="gene ID" value="PHAVU_009G078200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SUS6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1431713at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029480">
        <property type="entry name" value="Transpos_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13963">
        <property type="entry name" value="Transpos_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transposase-associated" evidence="1">
        <location>
            <begin position="3"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15982" checksum="2746A71184C25881" modified="2014-02-19" version="1">MDKSWINMPRNTCQYMDGLNKYLDFAFANKSVEGKIICPCPKCNLKKWQTREATHEHLILHPFSKGYTFWLLHGETSFVQNTNETPPVFQSNEHKVSGNDLIRVMVNDAFKKKFYDDNVEDDENMRPRSSEMMPDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATX5</accession>
    <name>V7ATX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF4005 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G015200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IQD family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATX5"/>
    <dbReference type="SMR" id="V7ATX5"/>
    <dbReference type="STRING" id="3885.V7ATX5"/>
    <dbReference type="Gramene" id="ESW08062">
        <property type="protein sequence ID" value="ESW08062"/>
        <property type="gene ID" value="PHAVU_009G015200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08063">
        <property type="protein sequence ID" value="ESW08063"/>
        <property type="gene ID" value="PHAVU_009G015200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08064">
        <property type="protein sequence ID" value="ESW08064"/>
        <property type="gene ID" value="PHAVU_009G015200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSVPHFM"/>
    <dbReference type="OrthoDB" id="1747078at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025064">
        <property type="entry name" value="DUF4005"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295">
        <property type="entry name" value="IQ-DOMAIN 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295:SF154">
        <property type="entry name" value="PROTEIN IQ-DOMAIN 32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13178">
        <property type="entry name" value="DUF4005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4005" evidence="6">
        <location>
            <begin position="738"/>
            <end position="802"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="191"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="304"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="376"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="485"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="616"/>
            <end position="827"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="194"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="376"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="627"/>
            <end position="639"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="661"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="681"/>
            <end position="691"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="692"/>
            <end position="706"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="732"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="774"/>
            <end position="785"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="799"/>
            <end position="814"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00045534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW08063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="827" mass="90517" checksum="0263073DAB08C47D" modified="2014-02-19" version="1">MGKSTSCFKLITCGGDAPEKDDYHQVSEVKESNDKRGWSFRKKSARHRVLSNTVIAESPSSANKEHSESTNFNFQPLPEPNVVEKIYTANYSDEKPQLSSFENSQVAETNVIESEKKVDVNPPESDVIIIQAAIRGLLAQRELLQRTKVVKLQAAFRGHLVRRHALGTLRCVQAIIKMQVLVRARRAQQSHLENPLDHKDGKKDSSEALGNENLMTKSNVNYTSIEKLLSNRFASQLLESTPKNKPIHVKCDPSKGDSAWKWLERWMSISSKDIANCNETSSLTEQSKESKDSASVFQFETGIPSEPFPPAANTIPTVEDSPLPPEDEEKSITYDPNNFEFQASCSTPSIVKDDMEQVPAEEKTAYDAKVTLADTDSFQNDNSASDASAPPELYSLRKGPEIAPPSEHSSLHGEPEIAPPPELNSFYQKPEIDSEQNKRSMKRFASDQLESEGKKTMNGSKKLSNPAFIAAQSKFEELSSVANSGRTSNLSYQDSAVESQGDTFSVGNDGAYKTKEFAFENPALYLSRLAGSDCGTELSISSTLDSPDISEPGVMESERDAKDLVEGIGNIENTINRDDETNVSSAIPASNLATSVLDQSEVVDVISGNLGHSVVAVDSGEPANSNTEKDASDLQREPAESALQDLRSSPEASPRSHLTVPESQGTPSSQVSGQPKESKINKSRSGNKRRSLSLSNKSPTTPNQDSGSGGSREQLPKDQQNGKRRSSFGSVKPDHIDQEPRDNSTNSNSVPHFMQATESARAKINANNSPRSSPDVHERDVEVKKRLSLPGAAGRQGSPRIQRSTSKAQQTAKGNNIHPPQERKWLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUC1</accession>
    <name>V7AUC1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G161200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUC1"/>
    <dbReference type="SMR" id="V7AUC1"/>
    <dbReference type="Gramene" id="ESW07816">
        <property type="protein sequence ID" value="ESW07816"/>
        <property type="gene ID" value="PHAVU_010G161200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S159">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIWNFVN"/>
    <dbReference type="OrthoDB" id="3941538at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.340.30">
        <property type="entry name" value="Hypothetical protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005019">
        <property type="entry name" value="Adenine_glyco"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31116:SF17">
        <property type="entry name" value="DNA-3-METHYLADENINE GLYCOSYLASE I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31116">
        <property type="entry name" value="OS04G0501200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03352">
        <property type="entry name" value="Adenine_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="DNA-glycosylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="34"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="88"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="328"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR605019-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="41943" checksum="313EE0E33D57EB19" modified="2014-02-19" version="1">MSGPPRVRSMNVAVADPDARPVLVPAGNKVRAAVDVRKPVKKSTPEAEKKPVAHSNAPPQCISVPPPFILRRQERHQAVLKNLSSMNASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKTDKVSIDNVGGSDDADLSDSLEGKKRCAWVTPNTEPCYAAFHDNEWGVPVHDDRKLFEVLSFSGALAELTWPTILNKRQLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFNTFIWNFVNHKPIVNQFRYPRQVPVKSPKAEVISKDLIRRGFRSVGPTVIYTFMQVAGLTNDHLMSCFRFKECASNAEAMANESSLNSKVKEKANEEPTEVGLLLAVNKMNFTSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUL7</accession>
    <name>V7AUL7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_009G033900g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUL7"/>
    <dbReference type="SMR" id="V7AUL7"/>
    <dbReference type="Gramene" id="ESW08283">
        <property type="protein sequence ID" value="ESW08283"/>
        <property type="gene ID" value="PHAVU_009G033900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PDRWGFT"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000187">
        <property type="entry name" value="E3 ubiquitin-protein ligase ATL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053238">
        <property type="entry name" value="RING-H2_zinc_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155">
        <property type="entry name" value="RING FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155:SF583">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="17" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753758" description="RING-type E3 ubiquitin transferase" evidence="17">
        <location>
            <begin position="35"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="18">
        <location>
            <begin position="132"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="197"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="285"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="198"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="338"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW08283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="362" mass="40599" checksum="B420179EE7824770" modified="2014-02-19" version="1">MTTLPLKPHTTLHHDLFLFYFYFLLLTHFPPAAAAQLPNALTPPPPDRLSRLKFDKSMAIVLVILVAVFFLLGFLSVYTRQCAERRMRGRFDLSISIGRRNRGLDREIIETFPTFVYSTVKSLKIGLATLECAVCLSEFEEEETLRLIPKCSHVFHPECVDAWLANHSTCPVCRANLLPKPDDPSFVSIQIPDPVQPVLNSPVQPESTDSPKPNDLINHNRSPWSRSTGFSLASLIPRSHSTGHSLVQPRENCERFTLRLPEEVRNQLMTSTTLSRTTSCGLNLGLTPENSGRRGYRTRSVGSSLSAHVNRGVGSTGSSPHVRGHDRRWFFQSPPSKDSIKEDVGERSSDRLFSEATKDSHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUZ6</accession>
    <name>V7AUZ6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G044000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUZ6"/>
    <dbReference type="STRING" id="3885.V7AUZ6"/>
    <dbReference type="Gramene" id="ESW08418">
        <property type="protein sequence ID" value="ESW08418"/>
        <property type="gene ID" value="PHAVU_009G044000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2013011at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35127:SF1">
        <property type="entry name" value="GENOME ASSEMBLY, CHROMOSOME: A10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35127">
        <property type="entry name" value="OS03G0736900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="7629" checksum="773B8A8A9FBB08FA" modified="2014-02-19" version="1">MKAWDVVVQGKGVGCGLVCYLLKTCRVGSGPGNGMGVCLTHFCLVKVKDLMERVQSQLKNCWLLQSQWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXX9</accession>
    <name>V7AXX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transmembrane 9 superfamily member</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G209100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXX9"/>
    <dbReference type="Gramene" id="ESW10434">
        <property type="protein sequence ID" value="ESW10434"/>
        <property type="gene ID" value="PHAVU_009G209100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1278">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPNYGFY"/>
    <dbReference type="OrthoDB" id="1666796at2759"/>
    <dbReference type="PhylomeDB" id="V7AXX9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010008">
        <property type="term" value="C:endosome membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072657">
        <property type="term" value="P:protein localization to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004240">
        <property type="entry name" value="EMP70"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10766:SF55">
        <property type="entry name" value="TRANSMEMBRANE 9 SUPERFAMILY MEMBER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10766">
        <property type="entry name" value="TRANSMEMBRANE 9 SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02990">
        <property type="entry name" value="EMP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0967">Endosome</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007366111" description="Transmembrane 9 superfamily member" evidence="10">
        <location>
            <begin position="26"/>
            <end position="658"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="291"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="357"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="390"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="433"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="465"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="515"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="547"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="582"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="626"/>
            <end position="652"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW10434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="658" mass="74769" checksum="5FFB812BB16BBD65" modified="2014-02-19" version="1">MEYFAQFGLWVILILCSFQIQPNYGFYLPGSYPQKHGVTDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGIKDSAENLGELLMGDKIENSPYRFKMRNNESEIYLCQVEALSGDQLKILKERIDEMYQVNLLLDNLPAIRFTQKEGYFMRWTGYPVGVKIEDAYYLFNHLKFNVLVHKYEENVARVMGTGEGVELIPVGKEGSSEKPGYMVVGFEVIPCSIMHSANLVKNLKMYDKYPSSIRCDPATVAMPIKEGQPLVFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPSLLCVMVGDGVQILGMSIVTILFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRMWRTIGFGDQKGWVSIAWKTACFFPGISFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFSISVPLTLVGGYFGAKAPHIEYPVRTNQIPREIPEQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFVVLILLVLVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAMYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVHYLFSSVKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZJ0</accession>
    <name>V7AZJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_009G230200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZJ0"/>
    <dbReference type="STRING" id="3885.V7AZJ0"/>
    <dbReference type="Gramene" id="ESW10695">
        <property type="protein sequence ID" value="ESW10695"/>
        <property type="gene ID" value="PHAVU_009G230200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0605">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KIIDWPN"/>
    <dbReference type="OrthoDB" id="3638488at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05599">
        <property type="entry name" value="STKc_NDR_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000042">
        <property type="entry name" value="Non-specific serine/threonine protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000106">
        <property type="entry name" value="Non-specific serine/threonine protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000961">
        <property type="entry name" value="AGC-kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017892">
        <property type="entry name" value="Pkinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050839">
        <property type="entry name" value="Rho-assoc_Ser/Thr_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22988:SF76">
        <property type="entry name" value="CHROMOSOME UNDETERMINED SCAFFOLD_135, WHOLE GENOME SHOTGUN SEQUENCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22988">
        <property type="entry name" value="MYOTONIC DYSTROPHY S/T KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00433">
        <property type="entry name" value="Pkinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00133">
        <property type="entry name" value="S_TK_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51285">
        <property type="entry name" value="AGC_KINASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="1"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="AGC-kinase C-terminal" evidence="12">
        <location>
            <begin position="298"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="379"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="382"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW10695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="404" mass="46470" checksum="9F02854A9D76967D" modified="2014-02-19" version="1">MRCVTLCREKTSGNIYAMKKLKKSEMLTRGQVEHVRAERNVLAEVASDCIVKLFYSFQDEEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSSLSSIHEMEILDDGNLYDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYSVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCGVSHRLGTNGAEEIKAHPWFKDVIWDRLYEMEAAFKPQVYGELDTQNFMKFDEVEQPKATRAGSGPFRKKLLTTQDLNFVGYTYKNFAAIIKIITTFLERDTDPGNMSPQRTSIDSTHSDSGVNYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZS5</accession>
    <name>V7AZS5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G238500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZS5"/>
    <dbReference type="SMR" id="V7AZS5"/>
    <dbReference type="STRING" id="3885.V7AZS5"/>
    <dbReference type="Gramene" id="ESW10795">
        <property type="protein sequence ID" value="ESW10795"/>
        <property type="gene ID" value="PHAVU_009G238500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RMNH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MGTKLEC"/>
    <dbReference type="OrthoDB" id="1928288at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33167:SF33">
        <property type="entry name" value="MYB-CC TYPE TRANSCRIPTION FACTOR LHEQLE-CONTAINING DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33167">
        <property type="entry name" value="TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="247"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="272"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="34191" checksum="9F9B1A3687E9AD15" modified="2014-02-19" version="1">MGTKIEYSINLLASSVDSNNFIVGGVDVWEYYQHKGVTNNHFSLGINKLQDPPMDRMLDRNNIESIKKTMQMHEDIFKQQVRELHRVYSVQKMLMDDQRKETKQKKFWTPMNGIDMSHSHFLQQQQQQQTATTLISYGPDFHVQSLKEVTCSKERSGSCSGETMKRQRGFDLQRCAERDIFGRCEENEAGPSSYTALERCKISSNGCDEDMEVDLTLSIGGSQVKNNNNNNNSIKKPYHLLPLGCSDSPNGKTRELNSSVSFQSDRVGDCSDPTTPMSSSSVTFDQERKGPHWLSQGLKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B173</accession>
    <name>V7B173_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Carboxypeptidase</fullName>
            <ecNumber evidence="11">3.4.16.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G019100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Probable carboxypeptidase.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the peptidase S10 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.-" evidence="11"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B173"/>
    <dbReference type="SMR" id="V7B173"/>
    <dbReference type="STRING" id="3885.V7B173"/>
    <dbReference type="Gramene" id="ESW11310">
        <property type="protein sequence ID" value="ESW11310"/>
        <property type="gene ID" value="PHAVU_008G019100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VANKLWV"/>
    <dbReference type="OrthoDB" id="443318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004185">
        <property type="term" value="F:serine-type carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11320:FF:000004">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000453">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001563">
        <property type="entry name" value="Peptidase_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033124">
        <property type="entry name" value="Ser_caboxypep_his_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018202">
        <property type="entry name" value="Ser_caboxypep_ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802:SF435">
        <property type="entry name" value="SERINE CARBOXYPEPTIDASE-LIKE 46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802">
        <property type="entry name" value="SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00450">
        <property type="entry name" value="Peptidase_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00724">
        <property type="entry name" value="CRBOXYPTASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00560">
        <property type="entry name" value="CARBOXYPEPT_SER_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00131">
        <property type="entry name" value="CARBOXYPEPT_SER_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 11" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148948" description="Carboxypeptidase" evidence="11">
        <location>
            <begin position="26"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00037399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW11310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="461" mass="51797" checksum="7FC562EC8FCBB36D" modified="2014-02-19" version="1">MCSLLRSSIAMCVALQLLQLGIVHPSASHLRITHLPGQPQVEFQQFSGYVTVDDRNQQALFFYFAEAEKDAASKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNREANMLYLETPIGVGFSYSTDTSSYEGVNDEITARDNLVFLKNWFIKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDTTYKVFTSVCNYSRYVREYYNGAVSPVCSSVMSQVSTETSRFVDKYDVTLDVCLSSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVQEGIPVLVYSGDQDSVIPLTGSRTLVHKLAKKLGLKTTVPYRVWFEKQQVGGWTQVYGDILSFATIRGASHEAPFSQPERALVLFKSFLEGRPMPQEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2S1</accession>
    <name>V7B2S1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FPL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G235200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2S1"/>
    <dbReference type="SMR" id="V7B2S1"/>
    <dbReference type="STRING" id="3885.V7B2S1"/>
    <dbReference type="Gramene" id="ESW10756">
        <property type="protein sequence ID" value="ESW10756"/>
        <property type="gene ID" value="PHAVU_009G235200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2219">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEKHAKW"/>
    <dbReference type="OrthoDB" id="294052at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005770">
        <property type="term" value="C:late endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016197">
        <property type="term" value="P:endosomal transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901096">
        <property type="term" value="P:regulation of autophagosome maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007034">
        <property type="term" value="P:vacuolar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039272">
        <property type="entry name" value="CLEC16A/TT9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019155">
        <property type="entry name" value="CLEC16A/TT9_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21481">
        <property type="entry name" value="PROTEIN CLEC16A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21481:SF4">
        <property type="entry name" value="PROTEIN TRANSPARENT TESTA 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09758">
        <property type="entry name" value="FPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FPL" evidence="1">
        <location>
            <begin position="42"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="862" mass="97266" checksum="3DEC50858F636E4D" modified="2014-02-19" version="1">MWFSFWRSRDRFSLDHLRYLTDQLTKVQIVNDVNKDFVIEALRSIAELITYGDQHDPTFFEFFMEKQVVGDFVRILKLSKSISIPLQLLQTVSIMIQNLRSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTRNEEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDEFVNRYITSTPRTEHFSNLVSFFRNQCMDLYRLVSETLKNPGSDSTSAITAVVDEIEDNLYYFSDVISAGIPDVGRLITDSILMLLMFPLLLPSLRIVDTNDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALFYPSETFTKFSRGQVNGYASDCGFTSVSQKPDDNSAECKAEYLTVDVPNSSSSSGLYPESVMSENNCSRSNLALREVLLAYVTKGDDVQVLGSLSVLATLLQTKELDESMLDKLGILPQRKQHKNQLLQALVGEASGEEQLFSSENSSMRDSIGCELNTYLEKIKELYGLSYLCSDLVTSPRVPRFQVLDALVSLFCRSNISAETLWVGGWLLRQLLPYSEAEFNSHHLELLQVSYKNSATALVKEVRGFWPDLLITVLCNEWKNCKRAMESSYPPKEPKCVLFPTQILSSEEDTPEGSSFAAGERMHELAKVFVVLHQIQIFTLGRPLPEKPLIYPPGDLPANSRAQTSGLDLSGPKPGTEVNLVNAVPCRIAFERGKERHFSFLAISVGTSGWLVLAEELPLKKPFGLVRVAAPLAGCNPKIDDKHPRWLHLRIRPSSLPVLDPAKFNTHGKSKTKAFVDGRWTLAFREEESCKSALCMIVEEINFLHDEVHRRLKPLLNLETSLDLSGLADEVSSSNTTSSNTTPRNSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5W3</accession>
    <name>V7B5W3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G156700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5W3"/>
    <dbReference type="STRING" id="3885.V7B5W3"/>
    <dbReference type="Gramene" id="ESW12970">
        <property type="protein sequence ID" value="ESW12970"/>
        <property type="gene ID" value="PHAVU_008G156700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQYH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INVNCVP"/>
    <dbReference type="OrthoDB" id="1907298at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053284">
        <property type="entry name" value="RGS1-HXK1_interactor"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34554:SF1">
        <property type="entry name" value="ALANINE-TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34554">
        <property type="entry name" value="RGS1-HXK1-INTERACTING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="9921" checksum="00E88A9BD14ABAFF" modified="2014-02-19" version="1">MGALHAEEQFLHGRRKLRQAGKQIRNVIQSAYKIERRAGGLKDILGELPKREASIFRSQVSKLASEAKKEKRSLSKEISKISNYGISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B609</accession>
    <name>V7B609_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA mismatch repair proteins mutS family domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G188400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B609"/>
    <dbReference type="SMR" id="V7B609"/>
    <dbReference type="STRING" id="3885.V7B609"/>
    <dbReference type="Gramene" id="ESW13347">
        <property type="protein sequence ID" value="ESW13347"/>
        <property type="gene ID" value="PHAVU_008G188400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT8G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMPLSQM"/>
    <dbReference type="OrthoDB" id="1924787at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045910">
        <property type="term" value="P:negative regulation of DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001241">
        <property type="entry name" value="Endonuclease MutS2 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046893">
        <property type="entry name" value="MSSS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005747">
        <property type="entry name" value="MutS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01069">
        <property type="entry name" value="mutS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48466:SF2">
        <property type="entry name" value="OS10G0509000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48466">
        <property type="entry name" value="OS10G0509000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20297">
        <property type="entry name" value="MSSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005814">
        <property type="entry name" value="MutS_YshD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="DNA repair protein MutS, domain III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair proteins mutS family" evidence="6">
        <location>
            <begin position="501"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="685"/>
            <end position="728"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="611"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="691"/>
            <end position="728"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="792" mass="87816" checksum="4CB84171D9C5AD92" modified="2014-02-19" version="1">MLSFAITIPVVPVITINKWKQRHMQRLRQRVSASIHHDSLRVLEWDKVCDLVASFATTSLGRQALKDQLWSLNQTFEESLALLEETNAAVEMHKHGTLRLHLGHLDAMLVKTAIQHARRSTPVSGNEARAIVTLLQCAEILQGDLKAAIKEDKDWHGRFMPLTELIMEFVINRSLIKVIEQVVDEDGSVKDSASPALKHSRQQVQVIERKVKQLIESIIRSERSETSILEVNNEDGRWCIRVDSRQKTSFKGLLLSSGSGIGSTIEPLSVVPLNDELQRARSLVAKAEADVLLALTKKMQLDLDDIEKILNSLVQLDVINARATYGLSFGGSSPHIFLPDRSESSTTEAFLRRSENSYGPLANKRGWKLYLLKAYHPLLLHRHRENLKRTKKDVNLATSDATLDNALPVPVDFLISKKTRVVVITGPNTGGKTICLKTVGLAAMMAKSGVYVLASESAKIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISHIKLHATSQSLVLLDEVGAGTNPLEGAALGMSLLESFAHDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSVVVDTSRKLYGSASAEIDEVITDMERFKQNYKELMDEARNYLMHSRELYNSLLNTRRKIMKHSTDIRFKKMRDVSDAAAMARSILRKKVREMDISAKQPSQNNKTISSSHLSATNKSQIAANNKEPTVADRSTSAVKVFSQSSLGSGKSKPPKVGDTVHISSLGKKVTVLEVDSSKGEIVVQAGIMKLKLKLTDVQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6C8</accession>
    <name>V7B6C8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific lipid-transfer protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G198400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6C8"/>
    <dbReference type="SMR" id="V7B6C8"/>
    <dbReference type="STRING" id="3885.V7B6C8"/>
    <dbReference type="Gramene" id="ESW13462">
        <property type="protein sequence ID" value="ESW13462"/>
        <property type="gene ID" value="PHAVU_008G198400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAI7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASNDYNC"/>
    <dbReference type="OrthoDB" id="1403824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01960">
        <property type="entry name" value="nsLTP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00234">
        <property type="entry name" value="Tryp_alpha_amyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00382">
        <property type="entry name" value="LIPIDTRNSFER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754182" description="Non-specific lipid-transfer protein" evidence="4">
        <location>
            <begin position="21"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="5">
        <location>
            <begin position="30"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="12721" checksum="FE1C38DCA7C9B797" modified="2014-02-19" version="1">MKSAFVLFLSLVVVLVLTLAATEPPKALNCEQTKSLMSPCLDYLTKKTSTPSTPCCLGLNKLIVSTPTKEEKCAACKCLKGEASHIPNLDVDRANSLPKVCKINVDYPISKDFDCEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B728</accession>
    <name>V7B728_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G130100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B728"/>
    <dbReference type="STRING" id="3885.V7B728"/>
    <dbReference type="Gramene" id="ESW12643">
        <property type="protein sequence ID" value="ESW12643"/>
        <property type="gene ID" value="PHAVU_008G130100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWHILPP"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047:SF182">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="37649" checksum="D439747A30872C6E" modified="2014-02-19" version="1" fragment="single">MEGLFSEAESSSLKLYILPFPAPGHMNPQINLAQVLAFRGHHVTILTTPLNHQFIPKHLNVHTFNFPSDQAGLSSTLQNISSAEDNQTAYKIWKATHGLKPQIETFLQQNPPHVLISDIMFPWNFASTLNIPRVVFSPTPIFALCVAEAINNCHPQVLPSDSSLPFVVPGDLPHHVTLNFDPWTTSFRTMARCWLHAKEKNTAGVIVNTFAELEDGYSEYFQKLTGVKVWHVGELSLMLDYYHRRGSSSQKNHVSDKVGEHECLNWLSSKEAKSVVYICFGSLGGLSKEQYLEIARGMEASGQNFLLVLPKNVNDDGWVHGLEERMRENERGMVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAA9</accession>
    <name>V7BAA9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Conserved oligomeric Golgi complex subunit 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G193300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAA9"/>
    <dbReference type="STRING" id="3885.V7BAA9"/>
    <dbReference type="Gramene" id="ESW13406">
        <property type="protein sequence ID" value="ESW13406"/>
        <property type="gene ID" value="PHAVU_008G193300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2211">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLRINIT"/>
    <dbReference type="OrthoDB" id="18786at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017119">
        <property type="term" value="C:Golgi transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006891">
        <property type="term" value="P:intra-Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019465">
        <property type="entry name" value="Cog5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048485">
        <property type="entry name" value="COG5_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049176">
        <property type="entry name" value="COG5_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13228">
        <property type="entry name" value="CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13228:SF3">
        <property type="entry name" value="CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20649">
        <property type="entry name" value="COG5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10392">
        <property type="entry name" value="COG5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Conserved oligomeric Golgi complex subunit 5 N-terminal" evidence="6">
        <location>
            <begin position="52"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="Conserved oligomeric Golgi complex subunit 5 helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF10392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF20649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="521" mass="56587" checksum="B3A96F3EFF098273" modified="2014-02-19" version="1">MASPAAARSPVSAGASPMQRLSTFKSPSAGAASVTTPTSSALDSLALDPIFSAFLSPSFSSTSFSSAALSSGSPASTAEKLHHAIRLLENQLRSEVLSRHHDLLSQLSSLHHADHALSTLRSSLSSLQSSVRRLRSELSDPHRAVTAKTTQLSNLHLTTELLQHSIRALRLSKKLRDLMAADPEKLDLAKAAQLHYEILSLCDEYDLGGIDAVDEEIVWVRETGDLVRSEAMKVLERGMEGLNQAEVGTGLQVFYNLGELKVTVEQVVNKYKGLGAKSVSVALDMKAVTGGSGYGPGGIRSSGTPHIGGGAKAREALWHRLGSCMDQLHSIAVAVWHLQRVLSKKRDPFSHVLLLDEVIQEGDPMLTERVWEAIAKAFANQMKSAFTASSFVKEIFTMGYPKLYSMIENLLERISHDTDVKGVLPAINSSGKEQIISAIEIFQNAFLAHCLGRLSDLVNSVFPMSSRGSVPSKEQISRIITRIQEEIEAVQVDARLTLLVLREIGKVLILLAERAEYQVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBQ6</accession>
    <name>V7BBQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">FAS1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G037300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the fasciclin-like AGP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBQ6"/>
    <dbReference type="SMR" id="V7BBQ6"/>
    <dbReference type="STRING" id="3885.V7BBQ6"/>
    <dbReference type="Gramene" id="ESW15020">
        <property type="protein sequence ID" value="ESW15020"/>
        <property type="gene ID" value="PHAVU_007G037300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RIKK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPCKLLW"/>
    <dbReference type="OrthoDB" id="1893649at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052806">
        <property type="entry name" value="Fasciclin-like_AGP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33985:SF34">
        <property type="entry name" value="FASCICLIN-LIKE ARABINOGALACTAN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33985">
        <property type="entry name" value="OS02G0491300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754366" description="FAS1 domain-containing protein" evidence="2">
        <location>
            <begin position="18"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="3">
        <location>
            <begin position="23"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="3">
        <location>
            <begin position="163"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="35321" checksum="E24EF9E45889D473" modified="2014-02-19" version="1">MKQSAFVFVLFFSLAGALPREAIFDAADVLSDSGFVSMALTLEVVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLLRFHLAPLPLTPSSLRLLTAGAKIPTMLSGQSLTATTSSADRLTSINNIKLTQSPIYDDGSLLVYGIDRFFDPNFQLPSSSDSNSSCSAKNHTASVSDSFNQAIQTLKTGGYSAVAAFLEMQLFGVAEFSGITVFAPADDLVLNRIGDFSQYPSFFRRHVVPCRLLWNDLVNFDDGSELSSFLEGFTINITRSGGVLVFNGVPVFFPDVFFNDRIVVHGVSNILASQNTAFRHNAHVVDYEGNLFDTSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCH1</accession>
    <name>V7BCH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G080600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCH1"/>
    <dbReference type="SMR" id="V7BCH1"/>
    <dbReference type="STRING" id="3885.V7BCH1"/>
    <dbReference type="Gramene" id="ESW15539">
        <property type="protein sequence ID" value="ESW15539"/>
        <property type="gene ID" value="PHAVU_007G080600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0910">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAANDIC"/>
    <dbReference type="OrthoDB" id="2121326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008047">
        <property type="term" value="F:enzyme activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000001">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45663">
        <property type="entry name" value="GEO12009P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45663:SF15">
        <property type="entry name" value="THIOREDOXIN Y1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="7">
        <location>
            <begin position="53"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="28"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="175" mass="19509" checksum="9128EF87297EA130" modified="2014-02-19" version="1">MTVSVSASSAISSLSSERSTRLPPSFAAVSSSAKQSSLQFPSRTRLLRISTPRAPTSPRPRFLPQAQAKKQTFNSFDDLLANSEKPVLVDFYATWCGPCQFMVPILNEVSTRLKDKIQVVKIDTEKYPSIADKYKIEALPTFIMFKDGEPYDRFEGALTADQLIERIEAGLKVEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCH2</accession>
    <name>V7BCH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FLZ-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G058400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FLZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCH2"/>
    <dbReference type="STRING" id="3885.V7BCH2"/>
    <dbReference type="Gramene" id="ESW15264">
        <property type="protein sequence ID" value="ESW15264"/>
        <property type="gene ID" value="PHAVU_007G058400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW15265">
        <property type="protein sequence ID" value="ESW15265"/>
        <property type="gene ID" value="PHAVU_007G058400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS8T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWSESNT"/>
    <dbReference type="OrthoDB" id="1902692at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044593">
        <property type="entry name" value="FLZ8/MARD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007650">
        <property type="entry name" value="Zf-FLZ_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46443">
        <property type="entry name" value="FCS-LIKE ZINC FINGER 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46443:SF21">
        <property type="entry name" value="FCS-LIKE ZINC FINGER 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04570">
        <property type="entry name" value="zf-FLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51795">
        <property type="entry name" value="ZF_FLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="FLZ-type" evidence="5">
        <location>
            <begin position="222"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="FLZ-type" evidence="4">
        <location>
            <begin position="222"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="276" mass="30636" checksum="495696ED8C8971BC" modified="2014-02-19" version="1">MADSGSSEKYKKSVSSSFFGSPRLFTNFTPKGFHETETMMSPTSILDSKPFSGFKNPFWSETNSPRTPGSEHKRHWDRLDSKGVGLGLVDALVDEDKHSEVSSKHESRMVVFGSQLKIQIPPLSPTESSKFVAEKGNYSPGSLCMGKSASGGANSPRVFMGCLSASEMELSEDYTRVISHGPNPRTTHIFDNCIIESSCFELGCSAKEDGCFPHRTSYHSRSFLSVCFHCKRNLGEGKDIYMYRGERAFCSNECRYQGMVLEEEMSKLEGSDIYGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCM7</accession>
    <name>V7BCM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CHORD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G063300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCM7"/>
    <dbReference type="STRING" id="3885.V7BCM7"/>
    <dbReference type="Gramene" id="ESW15325">
        <property type="protein sequence ID" value="ESW15325"/>
        <property type="gene ID" value="PHAVU_007G063300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1667">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEGSCTY"/>
    <dbReference type="OrthoDB" id="10261079at2759"/>
    <dbReference type="PhylomeDB" id="V7BCM7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051879">
        <property type="term" value="F:Hsp90 protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1130.20:FF:000003">
        <property type="entry name" value="Cysteine and histidine-rich domain-containing protein RAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1130.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007051">
        <property type="entry name" value="CHORD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043316">
        <property type="entry name" value="RAR1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47895">
        <property type="entry name" value="CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47895:SF2">
        <property type="entry name" value="CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04968">
        <property type="entry name" value="CHORD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51401">
        <property type="entry name" value="CHORD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CHORD" evidence="4">
        <location>
            <begin position="10"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="CHORD" evidence="4">
        <location>
            <begin position="157"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW15325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="223" mass="24681" checksum="7B9F57794CECD308" modified="2014-02-19" version="1">MEKTSLKVRCQRIGCDATFSEDDNPDGSCRYHDSPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVIAPVKKNTMPSPTAVSSTNASSKDSCSRCRQGFFCSDHGSQSKPVNVVNKSPNLVGNASAVINSSVQAPKPEKIVNLNEPQICKNKGCGQTFKEKDNNDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCTKGWHNADPESH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD73</accession>
    <name>V7BD73_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G102500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD73"/>
    <dbReference type="SMR" id="V7BD73"/>
    <dbReference type="STRING" id="3885.V7BD73"/>
    <dbReference type="Gramene" id="ESW15792">
        <property type="protein sequence ID" value="ESW15792"/>
        <property type="gene ID" value="PHAVU_007G102500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4234">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSAIDDC"/>
    <dbReference type="OrthoDB" id="1872379at2759"/>
    <dbReference type="PhylomeDB" id="V7BD73"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051879">
        <property type="term" value="F:Hsp90 protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013105">
        <property type="entry name" value="TPR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052769">
        <property type="entry name" value="TPR_domain_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46014">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46014:SF1">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07719">
        <property type="entry name" value="TPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="121"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="162"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="196"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="14"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="48"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="76"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="107"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW15792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="32619" checksum="AAB56FBD283F7CA2" modified="2014-02-19" version="1">MVVIEQEESEHRNASPSNAAGAANDASDGFETASEADLGSDDDNGDGGADRQEEKNHPEKHHQQQQTEQQPEHDVSQSTTESSENALITEESSENALITEESSENALIKEEESRQKSLDQANEAKVEGNKLFVDGKYEEALSQYEVALQVAPDTPSSVEIRSICHSNRGVCFLKLGKYDNTIKECTKALELNPVYVKAFVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKTIRRLEPLAAEKREKMKEEMIGKLKDMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGC2</accession>
    <name>V7BGC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G079800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGC2"/>
    <dbReference type="SMR" id="V7BGC2"/>
    <dbReference type="STRING" id="3885.V7BGC2"/>
    <dbReference type="Gramene" id="ESW15531">
        <property type="protein sequence ID" value="ESW15531"/>
        <property type="gene ID" value="PHAVU_007G079800g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="691673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
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        <property type="entry name" value="GT1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000061">
        <property type="entry name" value="Trihelix transcription factor GT-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000092">
        <property type="entry name" value="Trihelix transcription factor GT-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654">
        <property type="entry name" value="FI21293P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21654:SF73">
        <property type="entry name" value="TRIHELIX TRANSCRIPTION FACTOR GT-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="58"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="438"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="198"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="355"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="564"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="7">
        <location>
            <begin position="200"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="210"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="233"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="7">
        <location>
            <begin position="368"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="575"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="591"/>
            <end position="617"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="635" mass="71490" checksum="4EC3ED74F637F8CA" modified="2014-02-19" version="1">MQLGDTTAMETSSGEAVAAHDGGEVIMMDATSGEEKGKEGGLEEEEEGDKINNSCAGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVARKLAELGYHRSSKKCKEKFENVYKYHKRTKESRSGKQEGKHYKFFDQLQALENQFIVSYPLTPQPTLATTNTVALLPPPTKPSDTTTISYVTTTVPSTNPTAISLLSPPPPPPPPTNATTTTTITSPTVLTNPSNPPQPNNNNHNIPYSLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDKREREHVAQQDAWRIQEMARINREHELLVQERSTAAAKNAAVIAFLQQLSGQNQNPSTQAGANFLQPPPSQPPPTPQVSQVKPPPQHAPQPQTPMVMANINNIEIQKMSNGHSAVAATPTTAATAICVVSTTPTSLNSLSSSRWPKAEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRIGYNRSAKRCKEKWENINKYFKKVKESNKHRRENSKTCPYFNELDAIYKEKSKTQNPFGASFLNMKPHELMEPLMVQPEQQWRPPSQYEEGAVKENSESEYERKEREEEEEEDDEEVEEDENEEGDLESVEDEGGSRYEIATNKLSSVDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGJ0</accession>
    <name>V7BGJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Neprosin PEP catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G120100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGJ0"/>
    <dbReference type="SMR" id="V7BGJ0"/>
    <dbReference type="STRING" id="3885.V7BGJ0"/>
    <dbReference type="Gramene" id="ESW15988">
        <property type="protein sequence ID" value="ESW15988"/>
        <property type="gene ID" value="PHAVU_007G120100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSP9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRNDAPD"/>
    <dbReference type="OrthoDB" id="1858978at2759"/>
    <dbReference type="PhylomeDB" id="V7BGJ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1320.10:FF:000001">
        <property type="entry name" value="Putative carboxyl-terminal proteinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1320.10">
        <property type="entry name" value="Outer-capsid protein sigma 3, large lobe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053168">
        <property type="entry name" value="Glutamic_endopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004314">
        <property type="entry name" value="Neprosin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025521">
        <property type="entry name" value="Neprosin_propep"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31589:SF238">
        <property type="entry name" value="CARBOXYL-TERMINAL PEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31589">
        <property type="entry name" value="PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03080">
        <property type="entry name" value="Neprosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14365">
        <property type="entry name" value="Neprosin_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52045">
        <property type="entry name" value="NEPROSIN_PEP_CD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754307" description="Neprosin PEP catalytic domain-containing protein" evidence="1">
        <location>
            <begin position="42"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="Neprosin PEP catalytic" evidence="2">
        <location>
            <begin position="189"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS52045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW15988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="446" mass="50466" checksum="EB048E0437505D0E" modified="2014-02-19" version="1">MGITGRKRRCSCSAPSPCEERLLLLLFLFVAMLLQRAMVESRPLNYTRHRQTSTLRLERISRHLDKINKPPVLTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQKMPTEMPRGMKVNSRSDNEEEGESMRVREDAWQMWHLNGTRCPKGTVPIRRSTVHDVVRAKSLYDYGKKRSQLPLSRRNDAPDVLSANGHEHAIAYTGSSQEMYGAKATINVWDPSIQVMNEFSLSQLWILSGSFDGTDLNSIEAGWQVSPELYGDSRPRLFTYWTSDSYRATGCYNLLCAGFIQTNSRIAIGAAISPVSSYDGNQYDITILIWKDPKVGNWWMSFGDKTLVGYWPAELFTHLADHATMVEWGGEVVNSRSNGQHTFTQMGSGHFAEDGFGKASYFRNLQIVDMDNSLSSVQSISTLAENTNCYDIKSFYSKEWGTYFYYGGPGNNPQCPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIZ9</accession>
    <name>V7BIZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G200700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIZ9"/>
    <dbReference type="SMR" id="V7BIZ9"/>
    <dbReference type="STRING" id="3885.V7BIZ9"/>
    <dbReference type="Gramene" id="ESW16988">
        <property type="protein sequence ID" value="ESW16988"/>
        <property type="gene ID" value="PHAVU_007G200700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYTA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWCLASF"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="PhylomeDB" id="V7BIZ9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31964:SF125">
        <property type="entry name" value="OS05G0357525 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="6"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="161" mass="17670" checksum="C87B9B33ACC23583" modified="2014-02-19" version="1">MAEEGRRILVAVDEGEESMHALSWCLKNLVFQNSKDTLILLYVKSPRVVYSAFDGTGYLFSSEVTAAMESYVLRVADSVLEKAKKLCNNVEKVETRIENGDPREVICDMAQKLGADVLVMGSHGYGLIKRTFLGSVSNHCAQTVKCPVLIVKKPKSTAGNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJD6</accession>
    <name>V7BJD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta-carotene isomerase D27-like C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G175900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJD6"/>
    <dbReference type="STRING" id="3885.V7BJD6"/>
    <dbReference type="Gramene" id="ESW16671">
        <property type="protein sequence ID" value="ESW16671"/>
        <property type="gene ID" value="PHAVU_007G175900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSSG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CQFTREY"/>
    <dbReference type="OrthoDB" id="416096at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016859">
        <property type="term" value="F:cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901601">
        <property type="term" value="P:strigolactone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038938">
        <property type="entry name" value="D27-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025114">
        <property type="entry name" value="D27-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33591">
        <property type="entry name" value="BETA-CAROTENE ISOMERASE D27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33591:SF1">
        <property type="entry name" value="BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13225">
        <property type="entry name" value="D27-like_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-carotene isomerase D27-like C-terminal" evidence="1">
        <location>
            <begin position="140"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="270" mass="30151" checksum="58E89DE1F4EEBD93" modified="2014-02-19" version="1">MDAKLVALCRSPTLTSAHWKPKYHCVVAVLPRSADEISGETSKTKVYKDTFFGHIAINHISKCLQEATGLRNSKSGYESLVEAATMASQNFSPIQQHQVVTKSLDRAFPKPMLLLIKKVLPESKFTRTLFAIFTTLFFAWLVGPSEVRESDIDEGRREKNVVHIKKCRFLEEANCVGMCINLCKLPTQSFVKGSLGMPVNMVPNFDDMSCEMIFGQEPPESTNDPALKQPCYKLCKAKKSHGTNCQVNAEGFEVSKEGTRVAHIWCDDKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJE0</accession>
    <name>V7BJE0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G015200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJE0"/>
    <dbReference type="STRING" id="3885.V7BJE0"/>
    <dbReference type="Gramene" id="ESW18129">
        <property type="protein sequence ID" value="ESW18129"/>
        <property type="gene ID" value="PHAVU_006G015200g"/>
    </dbReference>
    <dbReference type="OMA" id="MRRCVIP"/>
    <dbReference type="OrthoDB" id="625231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31929">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="93" mass="10433" checksum="BF9F96F68FEA8F24" modified="2014-02-19" version="1">MGFRIKGILRRASVSTIQVASKGGEVPKGYIAVYVGDEMRRCVIPVSYLNQPSFQELLSKAEEEFGYDHPKGALTIPCQEDEFLNIISHFNQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJF7</accession>
    <name>V7BJF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">HSF-type DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G015700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the HSF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJF7"/>
    <dbReference type="Gramene" id="ESW18134">
        <property type="protein sequence ID" value="ESW18134"/>
        <property type="gene ID" value="PHAVU_006G015700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0627">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QDESLCW"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="PhylomeDB" id="V7BJF7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000037">
        <property type="entry name" value="Heat stress transcription factor B-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000232">
        <property type="entry name" value="HSF_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015">
        <property type="entry name" value="HEAT SHOCK TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015:SF304">
        <property type="entry name" value="HEAT STRESS TRANSCRIPTION FACTOR B-4B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00447">
        <property type="entry name" value="HSF_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00056">
        <property type="entry name" value="HSFDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00415">
        <property type="entry name" value="HSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00434">
        <property type="entry name" value="HSF_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HSF-type DNA-binding" evidence="10">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW18134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="31489" checksum="7578BCC14EFE8B56" modified="2014-02-19" version="1">MAFTVERFEENMVFSFETQKSVPAPFLTKTYQLVEDPLTDHIVSWGEDDTTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFKKGAKHLLCEIHRRKTPQLHHQLYHDQPPSQILQQDESLCWLDTPLSSPKSSTDILTALSEDNQRLRRKNFMLLSELSHMKSLYNDIIYFIQNHVKAPPFEQRTSSAIQKLVEFDSLNEPINNISLRTSKSSFVDKSFFTSTEESDSSVKLFGVLLSGRKRLHPDNIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMB9</accession>
    <name>V7BMB9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TRAF-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G262800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMB9"/>
    <dbReference type="STRING" id="3885.V7BMB9"/>
    <dbReference type="Gramene" id="ESW17720">
        <property type="protein sequence ID" value="ESW17720"/>
        <property type="gene ID" value="PHAVU_007G262800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17721">
        <property type="protein sequence ID" value="ESW17721"/>
        <property type="gene ID" value="PHAVU_007G262800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSC3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EQKCTAN"/>
    <dbReference type="OrthoDB" id="1737200at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001293">
        <property type="entry name" value="Znf_TRAF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10131:SF161">
        <property type="entry name" value="F26K24.24 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10131">
        <property type="entry name" value="TNF RECEPTOR ASSOCIATED FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02176">
        <property type="entry name" value="zf-TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50145">
        <property type="entry name" value="ZF_TRAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="TRAF-type" evidence="6">
        <location>
            <begin position="216"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="TRAF-type" evidence="4">
        <location>
            <begin position="216"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="341"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="342"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="377" mass="42692" checksum="300BBD402F0CC941" modified="2014-02-19" version="1">MELPTANVDLGPKKIEHEKEEGPLLHCDFCDIEVVHNLAQMFMPGLACACVDNTTGDPFNTPGFVAVDLRKEMIEFVTQKSELFVAESIISEGGPDGEALEHPFDIISYFVDEFVNSKRNLWSQFSGWLLSDKREDKIDDFIQEMEVNGFWPLDRRETLAKDLLKNVDFKSSFHCSMSFNSAEDLANHVDACDFRTVICQNEGCNVRFSAGQLKEHDSTCDFKIVPCEQKCTANILRREMDRHCLTVCPLKLVNCPFSAIGCRSTTAQSMIRKHCSDDIESHLFLMLKGIHQPASSEDLQRRVEQIVQTSSRSKLAEAKDVRSFKRIVKDLEVKLGSLEVSAEEKTSTEEVAKNEDREENRTSAVNGVNKEDSEHRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMU4</accession>
    <name>V7BMU4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G035600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMU4"/>
    <dbReference type="Gramene" id="ESW18375">
        <property type="protein sequence ID" value="ESW18375"/>
        <property type="gene ID" value="PHAVU_006G035600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1437005at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="30625" checksum="BCAD3355C557415D" modified="2014-02-19" version="1">MGNKFIMELHKWSSAAFPEEYALVCTSPFDKSKRSIFRLRVNPEMVLLRLAESVCDHHGVRLFHMELSAQRDNMDCFNLGKVRVVVDGTSPQTQSKGTKYLTLGACSPSASEYAGKDSLSDLCGRKSCFYEVMRKVESSGSVERVSWEFFHSYKVTLRSHIRYHVIIECDKETGLRANIRGPFQCDGPVLRAECVPRSLIQPVLTQEPSKAIRAFAESEFEGKEYILFHGASDKQCVIIDNTRALFHGHGNASQYKDCNIIMQTVVGKSLSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNY1</accession>
    <name>V7BNY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Amine oxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G028600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amine and polyamine degradation; spermine degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the flavin monoamine oxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNY1"/>
    <dbReference type="SMR" id="V7BNY1"/>
    <dbReference type="STRING" id="3885.V7BNY1"/>
    <dbReference type="Gramene" id="ESW18291">
        <property type="protein sequence ID" value="ESW18291"/>
        <property type="gene ID" value="PHAVU_006G028600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0029">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEDWPGF"/>
    <dbReference type="OrthoDB" id="5046242at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046592">
        <property type="term" value="F:polyamine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006598">
        <property type="term" value="P:polyamine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.660.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001613">
        <property type="entry name" value="Flavin_amine_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050281">
        <property type="entry name" value="Flavin_monoamine_oxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10742">
        <property type="entry name" value="FLAVIN MONOAMINE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10742:SF383">
        <property type="entry name" value="POLYAMINE OXIDASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00757">
        <property type="entry name" value="AMINEOXDASEF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54373">
        <property type="entry name" value="FAD-linked reductases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amine oxidase" evidence="6">
        <location>
            <begin position="36"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="245"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="351"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR601613-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="54179" checksum="01D5872AE131B8B9" modified="2014-02-19" version="1">MESRNKRSPQLTRALCYGNSKQEGRSPSVIVVGGGMAGVAAARALHDASFQVVLLESRERIGGRIHTDYSFGFPVDLGASWLHGVSKENPLASVIGRLGLPLYRTSGDNSVLYDHDLESYALFDTDGNQVPQELVTKVGGIFETILEETNKIREEFSEDMSVFRGLSIVLDRKPELRLEGLAHKVLQWYLCRMEGWFAADSDTISLKEWDQEVLLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKVIRRYNGVKVTVENGKTFFADAAIIAVPLGVLKAKRIQFEPKLPDWKEAAIADLGIGLENKIILHFENVFWPNVEFLGVVSDTSYGCSYFLNLHKAAGHPVLVYMPSGRLAKDIEKMSDEAAANFAFMQLQKILPDASSPIHHLVSRWGSDINSLGSYSYDAVGKPHELFERLRVPVDNLFFAGEATSMSYPGSVHGAFSTGMMAAEDCRMRVLERYGELDLFQPVMGEEASLSIPLQISRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP14</accession>
    <name>V7BP14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">glucan endo-1,3-beta-D-glucosidase</fullName>
            <ecNumber evidence="4">3.2.1.39</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">(1-&gt;3)-beta-glucan endohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">Beta-1,3-endoglucanase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_006G149100g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of (1-&gt;3)-beta-D-glucosidic linkages in (1-&gt;3)-beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.39"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
            <topology evidence="2">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 17">Belongs to the glycosyl hydrolase 17 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.39" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP14"/>
    <dbReference type="SMR" id="V7BP14"/>
    <dbReference type="STRING" id="3885.V7BP14"/>
    <dbReference type="Gramene" id="ESW19714">
        <property type="protein sequence ID" value="ESW19714"/>
        <property type="gene ID" value="PHAVU_006G149100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTII">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="941679at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042973">
        <property type="term" value="F:glucan endo-1,3-beta-D-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000002">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1040:FF:000001">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000490">
        <property type="entry name" value="Glyco_hydro_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044965">
        <property type="entry name" value="Glyco_hydro_17_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012946">
        <property type="entry name" value="X8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32227">
        <property type="entry name" value="GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00332">
        <property type="entry name" value="Glyco_hydro_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07983">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00768">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00587">
        <property type="entry name" value="GLYCOSYL_HYDROL_F17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14 18" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8 18" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="10 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0611">Plant defense</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 20" id="KW-0732">Signal</keyword>
    <keyword evidence="19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754791" description="glucan endo-1,3-beta-D-glucosidase" evidence="20">
        <location>
            <begin position="25"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="490"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="domain" description="X8" evidence="21">
        <location>
            <begin position="371"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00033335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00033417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU004336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="SMART" id="SM00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW19714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="511" mass="55758" checksum="C235FEC91DAC3B8E" modified="2014-02-19" version="1">MINSNYLIFLVSLLLILAFTQHHAATSDQTNAPFVGVNIGTDVSNLLPAPDLVNFLKHQKITHIRLYDANPDILRALSGTDIHVTISVPNNQLLAIGSSNATASSWIRKNVAAFRPATRIIAVSVGDEVLTTLPSAAPLLLPALLSLHAALVDSNLHKDVVVSTPHSASIILNPFPPSQAFFNQTLETFILPLLHFLSQTNSPLMLNLYPYYVFMQNKNLVPLDNTLFKTIPASKQMVDPNTLLHYTNLLDAMIDAAYFSMKNLNVSDVVVLVTETGWPSKGDSKEPYATLSNAVTFNSNLIKHVLDRSGTPLHPETTSSVYIYELFNEDLRSPPLSEAYWGLFYGNATPAYLLRVSGVGAFLASDNANQTYCVAGDGVDLKVLQAALDWACGPGRANCSEIQPGESCFQPNNVKNHASYAFDSYYQSQGMSPGSCDFKGVAMITTTDPSRGSCIFPGSRDLSNKTKQVVNTTHSSNAGDRTFRSIEISAIYDILHNYLVAIFPLLLLFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP52</accession>
    <name>V7BP52_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G034500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP52"/>
    <dbReference type="STRING" id="3885.V7BP52"/>
    <dbReference type="Gramene" id="ESW18361">
        <property type="protein sequence ID" value="ESW18361"/>
        <property type="gene ID" value="PHAVU_006G034500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1121">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LNEWCKN"/>
    <dbReference type="OrthoDB" id="1607513at2759"/>
    <dbReference type="PhylomeDB" id="V7BP52"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="hAT-like_transposase_RNase-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008906">
        <property type="entry name" value="HATC_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052035">
        <property type="entry name" value="ZnF_BED_domain_contain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481">
        <property type="entry name" value="ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481:SF11">
        <property type="entry name" value="ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05699">
        <property type="entry name" value="Dimer_Tnp_hAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14372">
        <property type="entry name" value="hAT-like_RNase-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02892">
        <property type="entry name" value="zf-BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00614">
        <property type="entry name" value="ZnF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="11">
        <location>
            <begin position="13"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW18361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="663" mass="75832" checksum="E6EC9CD0D803C734" modified="2014-02-19" version="1">MDMSDAVIVKSSRLKSVVWNDFDRIKKGDTCVAVCRHCKKKLSGSSTSGTSHLRNHLIRCQRRSSHGIAQYISAREKRKEGTLAIANFNIDQDTNKDDNTLSLVNIKFEQTQLKDDTVNTGTSNFDQRRSRFDLARMIILHGYPLAMVEHVGFRAFVKNLQPLFELVSLNRVEADCIEIYEREKKKVNEMLDKLPGKISLSADVWNAVGDAEYLCLTSNYIDESWQLRRRILNFIRIDPSHTEDMVSEAIMNCLMYWDIDRKLFSMILDSCSTCDNIAVRIGDRLLQNRFLYCNGQLFDIRCAANVINAMVQHALGAVSEIVIKIRETIGYIKSSQIILAKFNEMAKEVGILSQKGLCLDNASQWNSTYSMLEVALEFKDVLILLQENDAAYKVYLSDVEWERVTAVTSYLKLFVEVINVFTKNKYPTANIYFPELCDVKLHLIEWCKNSDEYISSLASRLRSKFDEYWEKCSLGLAVAAMLDPRFKMKLVDYYYPQIYGSMSASRIEEVFDGVKALYNEHSIGSPLASHDQGLAWQVGNGPLLLQGSAKDSRDRLMGFDKFLHETSQGEGTKSDLDKYLEEPLFPRNVDFNILNWWRVHTPRYPVLSMMARNVLGIPMAKVAPELAFNHSGRVLDRDWSSLNPATVQALVCSQDWIRSELEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPE8</accession>
    <name>V7BPE8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G160000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPE8"/>
    <dbReference type="Gramene" id="ESW19844">
        <property type="protein sequence ID" value="ESW19844"/>
        <property type="gene ID" value="PHAVU_006G160000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SC9G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAFGACE"/>
    <dbReference type="OrthoDB" id="1146319at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35726:SF5">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35726">
        <property type="entry name" value="GLUTAMIC ACID-RICH PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="159" mass="17305" checksum="61680C5BD74D37D9" modified="2014-02-19" version="1">MGEIEHIGDNKFCSSFFFEEEMKGVDVSSWLLIEDSADSEGDTGFFSLLYPNNIVANTGYNEDDAESCTRDTAGTCGLCGDGEGGEDENGYGEFCGDEDEGCGSGWSNSTMWLSDASLEVECSSPLVVEDEVETRIVKVNVNDVEDKIFWETCMAVGYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT21</accession>
    <name>V7BT21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PI31 proteasome regulator N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G149300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the proteasome inhibitor PI31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT21"/>
    <dbReference type="SMR" id="V7BT21"/>
    <dbReference type="STRING" id="3885.V7BT21"/>
    <dbReference type="Gramene" id="ESW19716">
        <property type="protein sequence ID" value="ESW19716"/>
        <property type="gene ID" value="PHAVU_006G149300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4761">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PFGFPDI"/>
    <dbReference type="OrthoDB" id="68090at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000502">
        <property type="term" value="C:proteasome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004866">
        <property type="term" value="F:endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070628">
        <property type="term" value="F:proteasome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043161">
        <property type="term" value="P:proteasome-mediated ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1000.30:FF:000005">
        <property type="entry name" value="Probable proteasome inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1000.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045128">
        <property type="entry name" value="PI31-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021625">
        <property type="entry name" value="PI31_Prot_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13266">
        <property type="entry name" value="PROTEASOME INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13266:SF1">
        <property type="entry name" value="PROTEASOME INHIBITOR PI31 SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11566">
        <property type="entry name" value="PI31_Prot_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PI31 proteasome regulator N-terminal" evidence="4">
        <location>
            <begin position="15"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="152"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="260"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="153"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="163"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="282"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF11566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="32129" checksum="98380C1DA70B2F94" modified="2014-02-19" version="1">MASEKSVLGVIRAARPAFRNRNDKIAFAIHSSFLASGYILTATGPQALSDNPFSDPSNDEVSVDNWNELNEEYAFVYANPEKGSEKVLVKSLVMNDKLLVNVLSQGSSEPISLEIDVGDYSGEDGGSNYAQQFKNLGKLVKRIDGDILSKLDGSAASAGSSRRSSETRDRTRQDIPEPVSGFGEPAGPPPQIIFPSVPIGSGSDLVPGPAAGVLPSRGGHGIGGSMLVGPDDPLWFGGGIGRDPAFPGRMPGLPPGARFDPYGPPGIPGFEPNRFARNPRRPGYDAHPDLQHFRRDADSDYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTF8</accession>
    <name>V7BTF8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Glycosyltransferase subfamily 4-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G057900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTF8"/>
    <dbReference type="STRING" id="3885.V7BTF8"/>
    <dbReference type="Gramene" id="ESW21282">
        <property type="protein sequence ID" value="ESW21282"/>
        <property type="gene ID" value="PHAVU_005G057900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2941">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKLIIDW"/>
    <dbReference type="OrthoDB" id="614844at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000030">
        <property type="term" value="F:mannosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000109">
        <property type="entry name" value="Chitobiosyldiphosphodolichol beta-mannosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000083">
        <property type="entry name" value="UDP-glycosyltransferase TURAN isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026051">
        <property type="entry name" value="ALG1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13036">
        <property type="entry name" value="BETA1,4 MANNOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13036:SF0">
        <property type="entry name" value="CHITOBIOSYLDIPHOSPHODOLICHOL BETA-MANNOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13692">
        <property type="entry name" value="Glyco_trans_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="480" mass="53814" checksum="32535298ED265BF8" modified="2014-02-19" version="1">MAGKSNEKKGGRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDVVAYGGSEPHTALLANPSIHFHIMKQWFTASQRLPKILQPIMLLLKPLVQFLMLLWFLCVKIPSPGVFIVQNPPSVPTLVAVKWASWLRNSYFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGNMADASLCVTKAMQHELAQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFQPLGVRDCVSNGNSLIASRETLFTTEVGSSIHLKPNRPALVVSSTSWTPDEDFSILLEAAVMYDRRVAAILGEDDSVDEEVMWKEISDGKQYLYPRLLFIITGKGPEKEKYEAKIKRLKLKRVAFRTMWLSADDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVRVDNNGLLFSSSSELADELLLLFKGFPDDCDALKVLKYGALETGSSARWATEWEEHAKPLITEVLSRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUB8</accession>
    <name>V7BUB8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">SUN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_005G002700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. [TAIR].</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUB8"/>
    <dbReference type="SMR" id="V7BUB8"/>
    <dbReference type="STRING" id="3885.V7BUB8"/>
    <dbReference type="Gramene" id="ESW20628">
        <property type="protein sequence ID" value="ESW20628"/>
        <property type="gene ID" value="PHAVU_005G002700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1396">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DSWKSHI"/>
    <dbReference type="OrthoDB" id="266334at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031965">
        <property type="term" value="C:nuclear membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034975">
        <property type="term" value="P:protein folding in endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000062">
        <property type="entry name" value="Galactose-binding protein isoform 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045120">
        <property type="entry name" value="Suco/Slp1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012919">
        <property type="entry name" value="SUN_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12953">
        <property type="entry name" value="MEMBRANE PROTEIN CH1 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12953:SF0">
        <property type="entry name" value="SUN DOMAIN-CONTAINING OSSIFICATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07738">
        <property type="entry name" value="Sad1_UNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51469">
        <property type="entry name" value="SUN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="23"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="541"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="581"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="domain" description="SUN" evidence="12">
        <location>
            <begin position="176"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="477"/>
            <end position="539"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00054046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW20628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="605" mass="68478" checksum="9AB2D4E1B71E93C2" modified="2014-02-19" version="1">MQRSRKALLERRAVEKATSGRSYLYKISLSLVFVLWGLVFLFSLWISCGYGYGDGLGEVPVGVSNWHEDEHNQCKNSNSADEYLTKETDDDTYTSSETFSSDVAKSNGFIVESLSGGESINNVVPGDKENYISPKIEEHEVERSESSVKLQNDVHKYNHLSQAMPLGLDEFKSRAIGSKIKSATSQHENIIHRLEPGGSEYNYASAAKGAKVLSSNKEARGASDILSRNKDKYLRNPCSSEEKFVVIELSEETLVKTIEIANFEHHSSNFKDFELHGSLVYPTDSWIFLGNFTASNVKQAQRFVLQEQKWVRYLKLNLQSHYGSEFYCTLSIVEVYGVDAIERMLEDLIYAQDKPFVSGEGNGEKRVASSLLANAADAGDVQQNTIRGINSDPTSEISSENKEAVIVNGNVPDPVEEIRQQVGRMPGDTVLKILMQKVRYLDLNLSVLEQYMEDLNSRYVSIFKEYGKDMGEKDLLLEKIKQEIRRFLEKQDVMMKEVSDLDSWKSHISMQLDHVLRDNAVLRSEVEKVRENQVSMENKSVVVFCVCVIFSFLAILGLSLDMIMSIYRVFSFERTETSRKFCLGISSWFLLLLSCSIIIFTLTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUG6</accession>
    <name>V7BUG6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Molybdopterin synthase sulfur carrier subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Molybdenum cofactor synthesis protein 2 small subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Molybdenum cofactor synthesis protein 2A</fullName>
            <shortName evidence="6">MOCS2A</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Sulfur carrier protein MOCS2A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G004900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotetramer; composed of 2 small (MOCS2A) and 2 large (MOCS2B) subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of MOCS3, then thiocarboxylated (-COSH) via the rhodanese domain of MOCS3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MoaD family. MOCS2A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUG6"/>
    <dbReference type="SMR" id="V7BUG6"/>
    <dbReference type="STRING" id="3885.V7BUG6"/>
    <dbReference type="Gramene" id="ESW20663">
        <property type="protein sequence ID" value="ESW20663"/>
        <property type="gene ID" value="PHAVU_005G004900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3474">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVLFFAK"/>
    <dbReference type="OrthoDB" id="5531344at2759"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990133">
        <property type="term" value="C:molybdopterin adenylyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990140">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030366">
        <property type="term" value="F:molybdopterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00754">
        <property type="entry name" value="Ubl_MoaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.30:FF:000010">
        <property type="entry name" value="Molybdopterin synthase sulfur carrier subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03051">
        <property type="entry name" value="MOCS2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044672">
        <property type="entry name" value="MOCS2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028887">
        <property type="entry name" value="MOCS2A_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01682">
        <property type="entry name" value="moaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33359">
        <property type="entry name" value="MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33359:SF1">
        <property type="entry name" value="MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="MoaD/ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="1-thioglycine; alternate" evidence="6">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <feature type="modified residue" description="Glycyl adenylate; alternate" evidence="6">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="103" mass="11330" checksum="29FCF77B02D9D010" modified="2014-02-19" version="1">MMEGDIKTLDENDTPNKNQSSLVKIKVLFFARARDLTGLSEMPLEVPSGSTTHDCLKKLFVKFPGLEEIRGCMVLALNEEYTTESSIVKDTDELALIPPISGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV68</accession>
    <name>V7BV68_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G025600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the thioredoxin family. Plant CITRX-type subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV68"/>
    <dbReference type="SMR" id="V7BV68"/>
    <dbReference type="STRING" id="3885.V7BV68"/>
    <dbReference type="Gramene" id="ESW20918">
        <property type="protein sequence ID" value="ESW20918"/>
        <property type="gene ID" value="PHAVU_005G025600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEYEFAQ"/>
    <dbReference type="OrthoDB" id="2121326at2759"/>
    <dbReference type="PhylomeDB" id="V7BV68"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009579">
        <property type="term" value="C:thylakoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009657">
        <property type="term" value="P:plastid organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000149">
        <property type="entry name" value="Thioredoxin-like protein CITRX, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044182">
        <property type="entry name" value="CITRX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47834">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47834:SF2">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="9" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="11">
        <location>
            <begin position="53"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="185" mass="21285" checksum="06C8FDA4B2F7BCF5" modified="2014-02-19" version="1">MFLSHCHVPHHTMPTLSPFNSKPLSSSLPNPSFLTHHHPYPLTTTTHLNNNKPLSLSTIPRKFLCKPPQGKYIRDDYLVKKLSAEEIQELVKGERKVPLIIDFYATWCGPCILMAQELEMLAVEYENKAVFVKVDTDDEYEFSRDMQVRGLPTVFFISPDPNKDAIRTEGLIPIQMMRDIIDKDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWB3</accession>
    <name>V7BWB3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G062300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW21333">
        <property type="protein sequence ID" value="ESW21333"/>
        <property type="gene ID" value="PHAVU_005G062300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEIANDL"/>
    <dbReference type="OrthoDB" id="1747797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057135">
        <property type="entry name" value="At4g27190-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF203">
        <property type="entry name" value="AAA+ ATPASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23247">
        <property type="entry name" value="LRR_RPS2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="5">
        <location>
            <begin position="141"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1511" mass="173664" checksum="1822F7D51DBFB8F1" modified="2014-02-19" version="1">MDSKIGESTTEHVRRQLGYITSYRSNHAKLIKEVEILEFRKSCVQEMVKKAKRNGEKILNNVQIWLKKMDATIVEANTLIFNGIQANYPMNIPNIQFRHQHSKKLQKMMHEIDQVLAEGFFDTISKPPILKEIQQVLKDPNIYKIGLYGIDGVGKTTLAKELAQEVKKDGSFDVVAMAEVTDSPNVENIQGQIANALALKFDEETKEERAEKLRRRIRKEKNILVILDDIWEKADLAELGIPFGDDHKGCKLLLTSERLNVLKRQMGTQKIFRLELLSDEDSWELFEKIAGQDIKLITTNNYGSALDEINFIVENVPKCCNGLPLFIVVVAKALRTKDLSTWKDALKQLKGLNEKGNFKEVVCPLELGYRYLKSNELRTLLLSIVSLGPGRICWEKRPNLRAQQKQLPFIIMREDITNLGYITVKEGMLIYNPQTSFPNNEPTDVGLGIKPKSTNLHLGLISCYWGLYGDSYELTKARNKYYKLIDDLRASSFLIEVEIEYVRMHDSVRDTAKAISSRTHLTYEVPNFTHKEQWDIDQLKKCHYINFPSYNLDELPEKLDCPELKLMSLKSNLGHLTIPDNFFVGMGEVKVLNLHRMNFAPSPPPSFRLLTNLRSLNLYECVLDDITIVAELTNLEIVSLERSKIQELPKDIGQLAYLRMLNLTNCCQLKTIPKNLISSLTCLEELYMGNCNIQWEGEGGESQTNHASLGELRNLNQLTTLDLSIHDASVLPADMDVFKQLQRYNISIGNMWKWSSLWSGDAREISRTLKLVDSLNTLIFLNRGVQMLFTTIEELSLGKLNFVDDVSYQLNTEAFQNLRHLYVQNSDAFRNLETLILCNLRDMYGPLAKQTLLLCNLRVMEDISYGPLATQCFEKLQVFKVQDCYKLKKLLSYSIAKNLSQLQEIEIVNCTAMEEIVYEEKLEDENMHNIKYNATLCFEKLQVIKVHHCHKLKKLLPYSLAKSLSKLQELEIFDCSDMEEIIYEEKLEIENLHNMKDFGTHCFQKLQVIKVQGCHKLKKLLPYSFAENLSQLQEMEILNCTVMEEIISEEKLEDENLHNMKDIGIHPFEKLQVINVQSCHKLKKLLPYALAKNLPQLQEMKIFQCKVLEEIISEEKLEDGKEFSKIMLPKLRSLTLNTLPKLRSFSLPLEINKDDGSIPLPLFNQKVSSPKLDMLVIINLNCLNSIWYNQQTPNSVSNLKEIKITGCHALHHVFPTAVAKELLQLQVLEISTSKIEMIVEDNNIQHAPDEITLPKLEQLKLEYLPRLTKFCQESYNLKFPSLKTVEIIGCNLKSSGHVDLTTRTELEWGGKNGQKDNELNLFNEKVTFPNLETLFINGMNGLNSIWNNFQGPNSFHKLNKIQIIGCRSLHHVFPVVVAKELQQLQVLQISRSSNIENIVVKSLSGGALRKHKNNSDAVFMPFKENKGDDADEIVFMNLKELYLEHLLRLGSFCEESYNFRFLALEKVRVIRCPNMKTFCYGNVSAPCLSNVRFGWTENLRWDGDLNTTVQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX94</accession>
    <name>V7BX94_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_005G1642001g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX94"/>
    <dbReference type="Gramene" id="ESW22569">
        <property type="protein sequence ID" value="ESW22569"/>
        <property type="gene ID" value="PHAVU_005G1642001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DERCRHR"/>
    <dbReference type="OrthoDB" id="2017114at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000146">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase IOS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.100">
        <property type="entry name" value="Cytochrome c1, transmembrane anchor, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF202">
        <property type="entry name" value="SENESCENCE-INDUCED RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="13 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-0675">Receptor</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="261"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="18">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW22569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="554" mass="61329" checksum="9FE22D06D1B9CF7E" modified="2014-02-19" version="1" fragment="single">PSTIIISGKEIKISLERTENSNLPPIINAIEIYRLIEFQQSDTYQGDVDAITSMKSVYGVKRDWEGDPCAPAAYLWDGLNCSYHGIESPRITTLNLSSSGLSGNVDPTISNLSMLEKLDLSNNNLTGEVPDFLIHLQRLKILNLEKNDLSGSIPSALVERSEEGSLSLSVGQNPYLCESGQCNETKKKNTVTPIVASISGVLILLIAVAILWIFFKRKKSKDSVTVNHQNKISQQSTEKDDSLLQCKSQMYSYNDVLQITNNFNRIIGKGGFGTVYLGFIDDTPVAVKMLSPLAVHGYQQFQAEVKVLIRVHHKNLTSLIGYCNGGTNKGLIYESKYNESPFLSWKERLRVAVDAAQGLEYLQNGCKPPIFHRDVKSSNILLDEHFQAKLSDFGLSKVVPDDGRSHVSTIVAGNFGYLDPHYHSSNRLTQKSDVCSFGVVLLEIITNQSVTGRNEENGHISERVSSMIPTGDIRAIVDSRLEGNFDINSAWKALEIAMTCVSPNPNERPMMSVVVIELQETLATELARTEHNNGADPWYSVAAWSESELMPLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXS4</accession>
    <name>V7BXS4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 13">Uroporphyrinogen decarboxylase</fullName>
            <ecNumber evidence="7 13">4.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_005G065500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 13">
            <text>uroporphyrinogen III + 4 H(+) = coproporphyrinogen III + 4 CO2</text>
            <dbReference type="Rhea" id="RHEA:19865"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57308"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="EC" id="4.1.1.37"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Porphyrin-containing compound metabolism; chlorophyll biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 14">Belongs to the uroporphyrinogen decarboxylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.37" evidence="7 13"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXS4"/>
    <dbReference type="SMR" id="V7BXS4"/>
    <dbReference type="STRING" id="3885.V7BXS4"/>
    <dbReference type="Gramene" id="ESW21376">
        <property type="protein sequence ID" value="ESW21376"/>
        <property type="gene ID" value="PHAVU_005G065500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2872">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAGQRGH"/>
    <dbReference type="OrthoDB" id="339900at2759"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004853">
        <property type="term" value="F:uroporphyrinogen decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00717">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.210:FF:000006">
        <property type="entry name" value="Uroporphyrinogen decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00218">
        <property type="entry name" value="URO_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006361">
        <property type="entry name" value="Uroporphyrinogen_deCO2ase_HemE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000257">
        <property type="entry name" value="Uroporphyrinogen_deCOase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01464">
        <property type="entry name" value="hemE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21091">
        <property type="entry name" value="METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21091:SF167">
        <property type="entry name" value="UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01208">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="UROD/MetE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00906">
        <property type="entry name" value="UROD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00907">
        <property type="entry name" value="UROD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="8 13" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="10 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="11 13" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Uroporphyrinogen decarboxylase (URO-D)" evidence="15">
        <location>
            <begin position="68"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Uroporphyrinogen decarboxylase (URO-D)" evidence="16">
        <location>
            <begin position="187"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS00906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS00907"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW21376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="408" mass="45074" checksum="024E592B9E960C59" modified="2014-02-19" version="1">MATSINSTVLGWKYSSFFSQSNAFNAVSPPFKPKPPLSKFSLTCSAASSSSDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKYPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGVDFDIEDIRGPVIHSPIRSEEDLKTLHPIDFDKLKFVGESLKILRQEVGGHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLKTLLSHLTQAIADYVIFQVESGAHCIQIFDSWGGQLPPAMWERWSKPYIKEIVHLVKKKCPEVPIVLYINGNGGLLERMKDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPAYLFSPLAALTEEIQRVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLQFDTLFPSNTAKNPNLVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYX7</accession>
    <name>V7BYX7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_005G102500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a long chain fatty alcohol + a fatty acyl-CoA = a long-chain alcohol wax ester + CoA</text>
            <dbReference type="Rhea" id="RHEA:38443"/>
            <dbReference type="ChEBI" id="CHEBI:17135"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:77636"/>
            <dbReference type="ChEBI" id="CHEBI:235323"/>
            <dbReference type="EC" id="2.3.1.75"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>an acyl-CoA + a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + CoA</text>
            <dbReference type="Rhea" id="RHEA:10868"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58342"/>
            <dbReference type="ChEBI" id="CHEBI:64615"/>
            <dbReference type="EC" id="2.3.1.20"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Glycerolipid metabolism; triacylglycerol biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Lipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">In the N-terminal section; belongs to the long-chain O-acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYX7"/>
    <dbReference type="SMR" id="V7BYX7"/>
    <dbReference type="Gramene" id="ESW21831">
        <property type="protein sequence ID" value="ESW21831"/>
        <property type="gene ID" value="PHAVU_005G102500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSH5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIRSGHK"/>
    <dbReference type="OrthoDB" id="619536at2759"/>
    <dbReference type="UniPathway" id="UPA00282"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004144">
        <property type="term" value="F:diacylglycerol O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047196">
        <property type="term" value="F:long-chain-alcohol O-fatty-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019432">
        <property type="term" value="P:triglyceride biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045034">
        <property type="entry name" value="O-acyltransferase_WSD1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009721">
        <property type="entry name" value="O-acyltransferase_WSD1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004255">
        <property type="entry name" value="O-acyltransferase_WSD1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31650">
        <property type="entry name" value="O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31650:SF34">
        <property type="entry name" value="O-ACYLTRANSFERASE WSD1-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06974">
        <property type="entry name" value="WS_DGAT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03007">
        <property type="entry name" value="WS_DGAT_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="O-acyltransferase WSD1-like N-terminal" evidence="11">
        <location>
            <begin position="69"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="O-acyltransferase WSD1 C-terminal" evidence="12">
        <location>
            <begin position="311"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF06974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW21831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="461" mass="51553" checksum="FCA9AA547F053CF4" modified="2014-02-19" version="1">MNCFEEDVPMPLSPMADYFSSSLINVFVLCVVESEIPIDESKFQPLLKNKLLPICSRFSSIMVTDKNGKKVWKQVDVNPEDHIKIPKFASTNGTLKLYDECLDEYMSKIAMEQLREDKPLWEVHIFNYPTTKAAGTIVVKLHHALGDGYSFMATFLSITQSADNPSLPIKLPSSKSVESTSTKGIGKRLSQTASVVFKSAFDFGWSFMKSSVMPDEQTPLRSGHEDVGFRPMSITNVSLSLDTIKEVKNKLKVSVNDVLVGAIFFGIQLYMKAKNQKSGTSESTALVLLNTRKIRAYKSAKEMHNDSEAPWGNRFHFMHVPIPMLTDKNELNPLEFVFEAKKKISRQRTSLAVPMTGVLLHLLNQIKGPQAATNYLYKTMNNASLSISHMVGPAEKVTLANHPIKGFYFMTVGLSQSITVTITSYMGHLRVGFGVEEGFIDEYQLKSCFETSLQQILEAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ28</accession>
    <name>V7BZ28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ENTH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G143700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasmic vesicle</location>
            <location evidence="1">Clathrin-coated vesicle</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ28"/>
    <dbReference type="SMR" id="V7BZ28"/>
    <dbReference type="STRING" id="3885.V7BZ28"/>
    <dbReference type="Gramene" id="ESW22315">
        <property type="protein sequence ID" value="ESW22315"/>
        <property type="gene ID" value="PHAVU_005G143700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2056">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKEEPRM"/>
    <dbReference type="OrthoDB" id="4033880at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030125">
        <property type="term" value="C:clathrin vesicle coat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030276">
        <property type="term" value="F:clathrin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005543">
        <property type="term" value="F:phospholipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006897">
        <property type="term" value="P:endocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03571">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013809">
        <property type="entry name" value="ENTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276:SF116">
        <property type="entry name" value="ENTH_VHS FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12276">
        <property type="entry name" value="EPSIN/ENT-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01417">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00273">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50942">
        <property type="entry name" value="ENTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0968">Cytoplasmic vesicle</keyword>
    <keyword evidence="3" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENTH" evidence="6">
        <location>
            <begin position="34"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="304"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="305"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="37109" checksum="5E86BF7944085531" modified="2014-02-19" version="1">MSVLLNKKMGTPLFHDFKKQASFFLKEKFKTARLALTDVTPAELMTEEVTKGNPWAPDSPTLRSISRAAFELEDYWRIVEILHKRLLKFEKKNWRASYNSLIVVEHLLTHGPESVAEEFQIDKEVISQMKGFQYSDDSGFNWGLTVREKSERILKLLEEGTLLKEERNRARRLSRGIQGFGSVSQRSTQAQGVLQEKALPTIFDRSNSDFNNNHYQENQSFGSNHFLDTAAAKSLSPGHERGIFKSQDGVEPENYLDDQGKAQIYQKSETPSKKEFHLWNLKGESNPLLDGNQENDSRLSIFTAEDDHPFNPKEIHSSSSLLPCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZD8</accession>
    <name>V7BZD8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G033700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZD8"/>
    <dbReference type="SMR" id="V7BZD8"/>
    <dbReference type="STRING" id="3885.V7BZD8"/>
    <dbReference type="Gramene" id="ESW23282">
        <property type="protein sequence ID" value="ESW23282"/>
        <property type="gene ID" value="PHAVU_004G033700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0332">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DFKNLCM"/>
    <dbReference type="OrthoDB" id="10265785at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="term" value="C:nuclear envelope"/>
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        <property type="project" value="EnsemblPlants"/>
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        <property type="term" value="F:ATP binding"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="F:hydrolase activity"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="F:mRNA binding"/>
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="term" value="F:RNA helicase activity"/>
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        <property type="project" value="UniProtKB-EC"/>
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        <property type="term" value="P:poly(A)+ mRNA export from nucleus"/>
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="term" value="P:response to abscisic acid"/>
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        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="term" value="P:response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
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        <property type="entry name" value="DEADc_DDX19_DDX25"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SF2_C_DEAD"/>
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        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
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        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
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        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
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        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
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        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="11">
        <location>
            <begin position="87"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="121"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="325"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="7">
        <location>
            <begin position="87"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="52"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="71"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="495" mass="54805" checksum="B546C1263D88EAB0" modified="2014-02-19" version="1">MAEPSTSAASTASSTTTTTAVIKSWADEADEETESPATIAAAETSSVNLDALKIEDNDDNPPKLLDDPDDSNIQAVTSGETPYTSASKFEDLNLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCVCPTRELANQNTEVLRKMGKYTGIASECAVPTDNNALSIAKRAPIMAQVVIGTPGTIKKWMSFKKLGASRLKILVFDEADQMLAEDGFKDDSLRIMKEIERVNSNCQVLLFSATFNDTVKNFVSRTVKADHNKLFVKKEELSLDAVKQYKVYCSDELAKIEVIKDYIFEIGENVGQTIIFVRTRNSAQMLHKSLVDLGYEVTSIQGALGYEEREKIVKEFRDGLTQVLISTDLLARGFDQQQVNLVINYDLPMKHTASYTREPEPDCEVYLHRVGRAGRFGRKGAVFNLICDEKDERLMSKIENHFGTRVAEVRAKSVEDYKGALKEAGLLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZY2</accession>
    <name>V7BZY2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G051300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7BZY2"/>
    <dbReference type="Gramene" id="ESW23487">
        <property type="protein sequence ID" value="ESW23487"/>
        <property type="gene ID" value="PHAVU_004G051300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0019">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYTLESQ"/>
    <dbReference type="OrthoDB" id="1555129at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050796">
        <property type="entry name" value="SCF_F-box_component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672">
        <property type="entry name" value="BNACNNG10540D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672:SF13">
        <property type="entry name" value="F-BOX PROTEIN CPR30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755128" description="F-box domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="411" mass="47758" checksum="F314AE147C14F801" modified="2014-02-19" version="1">MHIIFGRSFGYWLLLYLSGCGEGILTSKHNDHDHYTLESQPRASFIDTKDINAQKLLRGTKITLFLKDNQLEYLQDTTIKNLISKHCQLITHPIYLWSDNNKDHWQLINIWLRNKEMYDKFMSPKLGNHLPDDLAFSILFKLPLKSLKRYGCLHKSWAILLEKSNFMELFRINFISNQHSYYEDTSLLLCLDQPDKSSLFSLSSMSFQNIEKEIWSKGHCFGYFTLGSSSINGILCLYPYESGTIYLWNPSSDEFKIIPPSPIECIPDSMDPMFEYHGFGYDCARDDYKVIRELILFPKSWEIYSLRKSFILLNGSISLISNYYETTTFSISILAEIGKKETWTKLVTLGPLPYLPRPIGIGNMKYILFRTINGKLAWLDLRTHLVEKLDVNAHGIICQLIVYKGNLFPTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0C3</accession>
    <name>V7C0C3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DDT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G063200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0C3"/>
    <dbReference type="SMR" id="V7C0C3"/>
    <dbReference type="STRING" id="3885.V7C0C3"/>
    <dbReference type="Gramene" id="ESW23627">
        <property type="protein sequence ID" value="ESW23627"/>
        <property type="gene ID" value="PHAVU_004G063200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1411616at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040221">
        <property type="entry name" value="CDCA7/CDA7L"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018501">
        <property type="entry name" value="DDT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028942">
        <property type="entry name" value="WHIM1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31169">
        <property type="entry name" value="OS05G0300700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31169:SF8">
        <property type="entry name" value="ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15612">
        <property type="entry name" value="WHIM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00571">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50827">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0832">Ubl conjugation</keyword>
    <feature type="domain" description="DDT" evidence="11">
        <location>
            <begin position="251"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="392"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="557" mass="63546" checksum="83F13C8E5F6967F1" modified="2014-02-19" version="1">MEMSSIWMSHGNKYSYMTIMGKGRQKYPTKIANQPSSLCCSLHLTIQGGNSFSYFNMDNRLFSTQNKNFEEGFTSEKLKRSNSCPIQIGANGKSCHQCRQKKEDFAATCKNLKKGKPCPIKYCHKCLLTRYGENAEEVAHLADWICPKCRGFCNCSLCQKKRGEQPTGPLYRNAKESGFKSVAEMLAVKKASDDSGLNKELEVHFSGEFGKESCIDTNDAPFQEESKPIEEEILLPPGKELKEIFGIEVPSKDVGNALQLLEFCKVFGKALDLKEGEAEAILEELVCKQNMHGENTFLIEFHIRVLDLILNNSRNESPSLPTRDGNNSWLKHVEDLIMKSYHILNDFPLDWLQEGIGGYYKLDLSKKFKLMTFLCDEALNTEKLRSYIHEENSRHAKEVKEAKHKVAATKEKVKCLEKKLRSEKAKVVHSTVSPFPMEEHEALLSKIRIEVDEAHTDMLGLKGITQKAKLGCDALRIKPEFVDNNGQAFWNFRSCSSEYTVILQEIKIEDEIAKAPEEKWYVYGPDKKEEVHKYISKRSKRLNRRKVSHELLSEASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C275</accession>
    <name>V7C275_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G112400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C275"/>
    <dbReference type="STRING" id="3885.V7C275"/>
    <dbReference type="Gramene" id="ESW24224">
        <property type="protein sequence ID" value="ESW24224"/>
        <property type="gene ID" value="PHAVU_004G112400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMMANES"/>
    <dbReference type="OrthoDB" id="191139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055280">
        <property type="entry name" value="TIC32"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48476">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE TIC 32, CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48476:SF1">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE TIC 32, CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="220" mass="23991" checksum="E46752673BBD22D8" modified="2014-02-19" version="1">MWGLSRKGDSGFSSSSTALQVTQGIHATALTAIVTGASSGIGAETARVLALRGVHVIMGVIDMIDANNVKESILKEIPTAKVDVMKLDLSSMASVQNFATEFNSTRLPLNILINNAGICAAPFMLSTDNVELQFAINYLGHFHLTNLLLDNMKKTTRESKVQGRIVNVSSTGHQFTYRGGIHFEKINDPSSYNNWRAYGQSKLANILHAKELARRFKVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C284</accession>
    <name>V7C284_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF7733 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G113300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C284"/>
    <dbReference type="STRING" id="3885.V7C284"/>
    <dbReference type="Gramene" id="ESW24234">
        <property type="protein sequence ID" value="ESW24234"/>
        <property type="gene ID" value="PHAVU_004G113300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU47">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSQVFME"/>
    <dbReference type="OrthoDB" id="1906194at2759"/>
    <dbReference type="PhylomeDB" id="V7C284"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056635">
        <property type="entry name" value="DUF7733"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33829">
        <property type="entry name" value="OSJNBA0044M19.10 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33829:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24867">
        <property type="entry name" value="DUF7733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7733" evidence="2">
        <location>
            <begin position="46"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF24867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="247" mass="27758" checksum="78879EEE1DBB27F4" modified="2014-02-19" version="1">MSGGVGPTACDISLPKESELDYKEQQDQPPKNFNKSTPQNNLGFLSFNQLNSLVVVIVLSASGMVSPEDFAFVFFSLFYMYFISKVAFPPLKPSRDPQFFNPQSKLLQLYVLIGSTIGLFAPIAYILEGVFEGDKEGIRAAAPHVFLLASQVFMEGVASSQTFSDPIRAFVPAFYNARRIFTIVDWVRSEVYKNDEHSGSAWRVNVGRALALTNMAFWSFNLFGFMLPLYLPKVLKAYYSGYNEKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2S4</accession>
    <name>V7C2S4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G024400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2S4"/>
    <dbReference type="Gramene" id="ESW23171">
        <property type="protein sequence ID" value="ESW23171"/>
        <property type="gene ID" value="PHAVU_004G024400g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1427073at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="77" mass="8825" checksum="885FC2C4766B9F09" modified="2014-02-19" version="1">MFSSSRHKTILRRDGAAVKVCISARVVSYSIALWSGVAAFTIWAGHETNIPSFYCYLLVVFLEYDCCILYNFYPIYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C350</accession>
    <name>V7C350_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G036600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C350"/>
    <dbReference type="SMR" id="V7C350"/>
    <dbReference type="Gramene" id="ESW23316">
        <property type="protein sequence ID" value="ESW23316"/>
        <property type="gene ID" value="PHAVU_004G036600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW23317">
        <property type="protein sequence ID" value="ESW23317"/>
        <property type="gene ID" value="PHAVU_004G036600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EQIPECE"/>
    <dbReference type="OrthoDB" id="626167at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="7">
        <location>
            <begin position="11"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="184"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="8">
        <location>
            <begin position="439"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="9">
        <location>
            <begin position="731"/>
            <end position="851"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW23316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1151" mass="132170" checksum="478D3F3104C08C31" modified="2014-02-19" version="1">MAAEVIGGALLSAFLQVAFDKLASPQFLDFFRQRKLDEKLLTNLNIMLHSINSLADDAELKQFTDPHVKAWLFAAKEAVFDAEDLLGEIDYELTRSQVEAQSEPQTFTYKVSNFFNSTFTSFNKKIESRMKEVLEKLEYLAKQKGALGLKECTYSDNRLGSKVLQKLPSSSLVVESVIYGRDADKDIIINWLTSEIDNSNQPSILSIVGMGGLGKTTLAQHVYNDPKIDDVKFDMKAWVYVSDHFHVLTVTRTILEAVTGKTDDSRNLEMVHKKLKEKLSGKKFLLVLDDVWNERREEWELVQTPLSYGAPGSRILVTTRGENVASNMKSKVHRLMQLGEDECWNVFENHALKDGDLELNDELKDIGRRIVKRCKGLPLALKTIGCLLRTKSSISDWKNILESEIWELPKENNEIIPALFMSYCYLPSHLKKCFAYCALFPKDYGFVKEELVLLWMAQNFLQCPQQIRHPQHIRHLEEVGEQYFNDLVSRSFFHQSSVVGRFVMHDLLNDLAKYVCVDFCFRLKFDKGECIPKTTCHFSFEFRDVKSFDGFGSLTNAKRLRSFLPISQYWGSQWNFKISIHDLFSKIKFIRMLSFRDCSCLREVPDCVGDLKHLHSLDLSWCDAIQKLPDSMCLLYNLLILKLNYCSELQELPLNLHKLTKLRCLELNYCSKLEELPLNLHKLTKLRCLEFEGTEVSKMPMHFGELENLQVLSTFFVDRNSELSTKQLGGLGGLNLHGKLSINDVQNIMNPLDALEANVKDKHLVELELKWKSDHIPDDPRKEKEVLQNLQPSKHLEDLKISNYNGTEFPSWVFDNSLSNLVFLQLQDCKHCLCLPPLGILSSLKDLEIMGLDGIVSIGVEFYGSNSSFASLERLEFHNMKEWEEWECKTTSFPRLHELYMNECPKLKGTQVVVSDELTISGKSIDTWLLETLHIDGGCDSLTMFRLDFFPKLRSLELKRCHNIRRISQDYAHNHLQHLNIFDCPQFKSFLFPKPMQILFPFLMSLEITVSPQVEFHGLPLNVKYMSLSCLKLIASLRETLDPNTCLETLLIQNSDMKCFPDDVLLPRSLTSLLINSCLNLKKMHYKGLCHLSSLTLLDCPSLQCLPAEGLPKSISSLSIGRCPLLKERCQNPNGEDWPKIAHIRELNVWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C566</accession>
    <name>V7C566_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Mediator complex subunit 23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G021100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Mediator complex subunit 23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7C566"/>
    <dbReference type="STRING" id="3885.V7C566"/>
    <dbReference type="Gramene" id="ESW25264">
        <property type="protein sequence ID" value="ESW25264"/>
        <property type="gene ID" value="PHAVU_003G021100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1883">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RGHQIQD"/>
    <dbReference type="OrthoDB" id="9982951at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016592">
        <property type="term" value="C:mediator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005667">
        <property type="term" value="C:transcription regulator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010628">
        <property type="term" value="P:positive regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021629">
        <property type="entry name" value="Mediator_Med23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12691">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12691:SF10">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11573">
        <property type="entry name" value="Med23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1235"/>
            <end position="1264"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1331"/>
            <end position="1359"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1611" mass="180231" checksum="5C1C4B1638800719" modified="2014-02-19" version="1">MDQSQNPRAATSTTPSRSFQFHPARGPILDLFNLYLGLGRNSRNKPEDSLRDPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQLRSVTEAILISLVVQCSGHGPRADFLLFVLRSLCGIGCINWDSLLQSLLSSVSSAELPVGQLNQAVPTVSSSSLSQTGMLPPPSTIANSSNFQSSNPASPLTAVHTIGSPAQSTIESLSCAAMSPVKSSDISSAGQQSKLRGSSAIRNNDISNSSLRQLCCKIILIGLEFSLKPVTYAEIFNHMLNWLVNWDQRQQGMDESDVIKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTHVSGETHMRLSPITYSSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQMPTAGAVFSSEMICEATINRIVELLKMTNSEINCWQDWLVFSDIFYFLIKSGCIDFVDFVDKLVSRLSEGDHHILKTNHVTWLLAQIIRIEQVMNALNSDPRKVETTRKILSFHREDRSADPNNSQSILLDFVSSCQNLRIWSLNSSTRDYLNNEQLQKGKQIDEWWRQASKGDRMVDYMNMDERSIGMFWVVTYTMAQPACETVMNWLNSAGVADLLPGTNLQPAERLMATREVSPLPMSLLSGFSINLCVKLSYQMEDSLFSGQVIPSIAMVETYTRLLLLAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTDFTETLNRVTVITLAILIKTRGIADAEHLLYLQNMLEQIMATSHHTWSEKTLHHFPSVLREALSGRIDKRSLDIQTWQQAETTVIHQCNQLLSPSADPSYVMTYLGHSFPQHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSLQDLMLKASASLAFFVWTNELLPLDILLLALIDRDDDTHALRIVISLLDRQELQQRVKLFCMTRGHPEHWLYSGIFKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERVLAMYTPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDVSKIPFLESFPLQISLTNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSMGEASNNAQRTTQSKPAVVSQSGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVQSLVQIVVNIQPTLIQSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVALLRIAFRIMGPLLPKLANAHALFNKTLSSLLSILVDVFGKNSQTTIAVDASDIADIIDFLHHIVHYEGQGGPVQAISKPRADVLALIGRASENLRPDIQHLLSHLNPDVNSSVYAASHPKLVQNPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C583</accession>
    <name>V7C583_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G131200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C583"/>
    <dbReference type="SMR" id="V7C583"/>
    <dbReference type="STRING" id="3885.V7C583"/>
    <dbReference type="MEROPS" id="I03.025"/>
    <dbReference type="Gramene" id="ESW24440">
        <property type="protein sequence ID" value="ESW24440"/>
        <property type="gene ID" value="PHAVU_004G131200g"/>
    </dbReference>
    <dbReference type="OMA" id="NHAGKEI"/>
    <dbReference type="OrthoDB" id="1751999at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004867">
        <property type="term" value="F:serine-type endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011065">
        <property type="entry name" value="Kunitz_inhibitor_STI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002160">
        <property type="entry name" value="Prot_inh_Kunz-lg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107:SF21">
        <property type="entry name" value="KUNITZ FAMILY TRYPSIN AND PROTEASE INHIBITOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107">
        <property type="entry name" value="KUNITZ TRYPSIN INHIBITOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00197">
        <property type="entry name" value="Kunitz_legume"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00452">
        <property type="entry name" value="STI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50386">
        <property type="entry name" value="STI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0646">Protease inhibitor</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0722">Serine protease inhibitor</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755376" evidence="4">
        <location>
            <begin position="26"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW24440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="19863" checksum="191CAA1296CEB5AE" modified="2014-02-19" version="1">MKSTLSLTLSFSLLFTSNFLPLAFSRVLEQVLDSNGGGVEVDFDGNPRCQVSVIQNYDKFFRGEGLRFNTEGRSSGAILTETSLEIKFDYHPYCASSSKWVVGGDDFPAKCVGIGDGANHAGKEILSGTFTIKKYGEGYKFALCSNNTNHNTCFSVGRIDDHKRRRLILMDDSHPNAPFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C604</accession>
    <name>V7C604_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myb-like protein X</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G050700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C604"/>
    <dbReference type="STRING" id="3885.V7C604"/>
    <dbReference type="Gramene" id="ESW25612">
        <property type="protein sequence ID" value="ESW25612"/>
        <property type="gene ID" value="PHAVU_003G050700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS3H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARENNHV"/>
    <dbReference type="OrthoDB" id="1913135at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34660">
        <property type="entry name" value="MYB-LIKE PROTEIN X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34660:SF3">
        <property type="entry name" value="RRM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="269"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="269"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="378"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="405"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="422"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="552" mass="63642" checksum="DAA4A0D277D97FB9" modified="2014-02-19" version="1">MSRCFPFPPPGYLKKTVTDELDLLKKEKQKERKRKKDKKDKEKRETKEKRDKEGRDGKHKEKKDKKEKHREKKKDKNKDKSKDRDKSKISTTDDKGFPRKAEGLNGNQHQKEVKQDDKKDIMLENRLTKQCTGSNGEKAGEKNHFGEENKDSKFLLELNRRIRDDNGGADNQFVHNFTNTNNRKEEGTFRLVTKAGGPCCDGNEKLVDKGLDVKKIDERGIQAEIRPIGNTPVPNHAGKFHPRVDGIPKHLGKSFERNLEATVEAKEKVKEKKYEDKEMAKRKTKDGKVKEKKDEGNEKVKDKKDDKRRDKRKDKEKEKKGHGKNKDRDKEKKKEEKAREHSEHKTTDQNKSKESNNVGFKDFSQLSRNSLEVPVRGENLKKRKDIESNGVPHVNDSFPNKFPKLSSSRTFTDNGRTLEPHQISTPESSYRSQEDNCVKVENKECKINGISETKPFSASSKKTHTAIVSSDLLTEACLKAPHPDTKYLDQVYSVPKVDHWSDFDEEWLFGGNLPERKSMVKSSEVGDTPQVWAEALHIEQADVFALPYVIPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7F6</accession>
    <name>V7C7F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">40S ribosomal protein S15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G089200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7F6"/>
    <dbReference type="SMR" id="V7C7F6"/>
    <dbReference type="STRING" id="3885.V7C7F6"/>
    <dbReference type="Gramene" id="ESW26074">
        <property type="protein sequence ID" value="ESW26074"/>
        <property type="gene ID" value="PHAVU_003G089200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0898">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLDMQLC"/>
    <dbReference type="OrthoDB" id="1843218at2759"/>
    <dbReference type="PhylomeDB" id="V7C7F6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000028">
        <property type="term" value="P:ribosomal small subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.860.10:FF:000002">
        <property type="entry name" value="40S ribosomal protein S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="entry name" value="30s Ribosomal Protein S19, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_uS19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_uS19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020934">
        <property type="entry name" value="Ribosomal_uS19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005713">
        <property type="entry name" value="Ribosomal_uS19_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_uS19_SF"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003121">
        <property type="entry name" value="PRK04038.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01025">
        <property type="entry name" value="uS19_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="RIBOSOMAL PROTEIN S19P FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880:SF53">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US19U-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002144">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="Ribosomal protein S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00323">
        <property type="entry name" value="RIBOSOMAL_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW26074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="152" mass="17158" checksum="CF9ADE4A9920CC36" modified="2014-02-19" version="1">MADVEVDVAAAAQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C832</accession>
    <name>V7C832_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">(+)-abscisic acid 8'-hydroxylase</fullName>
            <ecNumber evidence="14">1.14.14.137</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G004800g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>2-cis-(+)-abscisate + reduced [NADPH--hemoprotein reductase] + O2 = (+)-8'-hydroxyabscisate + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12897"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:37569"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:58490"/>
            <dbReference type="EC" id="1.14.14.137"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 15">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="13">Plant hormone degradation; abscisic acid degradation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.137" evidence="14"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C832"/>
    <dbReference type="SMR" id="V7C832"/>
    <dbReference type="STRING" id="3885.V7C832"/>
    <dbReference type="Gramene" id="ESW25071">
        <property type="protein sequence ID" value="ESW25071"/>
        <property type="gene ID" value="PHAVU_003G004800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DDTRQMP"/>
    <dbReference type="OrthoDB" id="1372046at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010295">
        <property type="term" value="F:(+)-abscisic acid 8'-hydroxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016125">
        <property type="term" value="P:sterol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000014">
        <property type="entry name" value="Abscisic acid 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286:SF220">
        <property type="entry name" value="ABSCISIC ACID 8'-HYDROXYLASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286">
        <property type="entry name" value="CYTOCHROME P450 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 15 16" id="KW-0349">Heme</keyword>
    <keyword evidence="9 15 16" id="KW-0408">Iron</keyword>
    <keyword evidence="11 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 15 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 16" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="463"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00050609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00060633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00066338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW25071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="519" mass="59043" checksum="60E3F231A6FD01DF" modified="2014-02-19" version="1">MSSNSFSFSFSSSLFLSKFTSSTMHPLTNPFQDSLLFIITSFFFTSFFLLLTLLQWCHHHNHKKLPPGSMGWPYLGETLKLYTQNPNSFFSNRQNRYGDIFKTNILGCPCVMISSPEAARTVLVTQAHLFKPTYPPSKERLIGPEAVFFQQGAYHSMLKRLVQASFMPSTIKHSVSQVEQIVIKMVPSWTNKTINTLQEMKKYAFEVAAISAFGEIKELEMEEIRELYRCLEKGYNSYPLHLPGTSYWKAMKARKHLNKSIRKIIERRKVESPKQGGGLLEVLLQARSTSSSFSSSPSNDGGEKKKVLIELSDSQVADNLIGVIFAAHDTTASALTWVLKYLHDNSNLLEAVTKEQEGIKSKLAMENRGLSWDDTRQMPFTSRVIQETLRSASILSFTFREAVRDVELEGYRIPKGWKVLPLFRSIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLELLVLLHHLTLSYRWEVVGNEDGIQYGPFPVPKHGLPVKITPRTKIFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8K8</accession>
    <name>V7C8K8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein CHUP1, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G122900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8K8"/>
    <dbReference type="SMR" id="V7C8K8"/>
    <dbReference type="Gramene" id="ESW26479">
        <property type="protein sequence ID" value="ESW26479"/>
        <property type="gene ID" value="PHAVU_003G122900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW26480">
        <property type="protein sequence ID" value="ESW26480"/>
        <property type="gene ID" value="PHAVU_003G122900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVIT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YQSPKFK"/>
    <dbReference type="OrthoDB" id="673648at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072699">
        <property type="term" value="P:protein localization to cortical microtubule cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040265">
        <property type="entry name" value="CHUP1/IPGA1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31342:SF43">
        <property type="entry name" value="F11A17.16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31342">
        <property type="entry name" value="PROTEIN CHUP1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="239"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="268"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="567" mass="62692" checksum="72F12ED59E411892" modified="2014-02-19" version="1">MKQKTPSSPITARTVLKKQGDSNKSLQSPPQPRLRASPKAPKSPPEPSTRAKSVPTDLKDVSRAKRGAVVRSQKGREAEEAKVVVVARSRRRLGDFDLKKSEDDDPDGKKRKELQEKLEVSDNLIKSLQSEVLALKEELDKVKSLNVELESQNTKLTRNLAAAEAKEATVGIGNSGKESIGEHQSPKFKDIQKLIADKLELSRVKKEGAPEVNFAKASIPSPTPSFSIYETISIGRKSPPNSCLQPLPPPPPPITSLGRNSAPRTCLQPPPPPPPPPIPSRPSARLSNTQKAPAVVELFQSLNNKNGKIDSKGPVNHPRPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFVNDLIKKVVDAAFTDIEEVLKFVNWLDGKLSSLADERAVLKHFKWPEKKADAMREAAVEYHELKMLEQEISSYKDDPDIPCGAALKKMGSLLDKSERIIQRLIKLRSSVIHSYQVYNIPTAWMLDSGIMKNIKQASMTLVKMYMKRVTMELESIRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDAETMCAFEEMRQRVPGHLAGSRELLVGIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAT7</accession>
    <name>V7CAT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G115400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAT7"/>
    <dbReference type="SMR" id="V7CAT7"/>
    <dbReference type="STRING" id="3885.V7CAT7"/>
    <dbReference type="Gramene" id="ESW26385">
        <property type="protein sequence ID" value="ESW26385"/>
        <property type="gene ID" value="PHAVU_003G115400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0895">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FNDFWSE"/>
    <dbReference type="OrthoDB" id="47801at2759"/>
    <dbReference type="PhylomeDB" id="V7CAT7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd23837">
        <property type="entry name" value="UBCc_UBE2O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.110.10:FF:000133">
        <property type="entry name" value="Putative ubiquitin-conjugating enzyme E2 38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46116">
        <property type="entry name" value="(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46116:SF19">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="3">
        <location>
            <begin position="41"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW26385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="333" mass="37942" checksum="58DFD5F69601CBBF" modified="2014-02-19" version="1">MAAGTDNNNNMERFDVVSDDADHYFLVPVVDSRGFSRVGSNVYKRIMREWKILARGLPDSIYVRVYEKRIDLLRATIVGAAGTPYHDGLFFFDIAFPPDYPASPPDVHFRSYGFSVNPNLYSNGQVCLSLINTWIGRRNERWDPSRSTVLQLLLSIQALVLNDKPFFNDFWSEIFLLGRVFLEKRSQAYNEAVFALNCRTMLCQLRRPPRNFQTFVVAHFRDRAHAILSACADYANGRVRVGHCGEDGEGSKSKVKVSAKLRDSLVMLYPKLVEAFVLSGAVLGSDEERLRMEKRNGLCRSNVAMRKYRVIMTKVIGRIRKVYTSTLKTGDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBD2</accession>
    <name>V7CBD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G136200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBD2"/>
    <dbReference type="SMR" id="V7CBD2"/>
    <dbReference type="STRING" id="3885.V7CBD2"/>
    <dbReference type="Gramene" id="ESW26643">
        <property type="protein sequence ID" value="ESW26643"/>
        <property type="gene ID" value="PHAVU_003G136200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4667">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHIPTHE"/>
    <dbReference type="OrthoDB" id="9988524at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000170">
        <property type="entry name" value="Alpha/beta-Hydrolases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42886:SF49">
        <property type="entry name" value="BAAT_ACYL-COA THIOESTER HYDROLASE CARBOXY-TERMINAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42886">
        <property type="entry name" value="RE40534P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="1">
        <location>
            <begin position="34"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="29857" checksum="529EEE42BBF9E610" modified="2014-02-19" version="1">MADAQNPSFQQQKVIIRNKHGNRLVGILHESGTQEIVILCHGLRASKENFIMTNLAAALENAGISSFRFDFTGNGESEGLFEFGSYWREAEDIRAVAQHFQETNHTVIAIVGHSKGANAALLYASKYHDTKTIVNLSGSHDLKVGLENRFGKDFMERLGREGFIELKAESAGGIDYRVTEESLKDRLNIIMLEECLHIDKECRVFTVHGGTDTTIPVVAALEFAKVLPNHKLHIIEGADHVYTDHQAELASFVVDVIKETLQINLLTAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBG3</accession>
    <name>V7CBG3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G211000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBG3"/>
    <dbReference type="Gramene" id="ESW27542">
        <property type="protein sequence ID" value="ESW27542"/>
        <property type="gene ID" value="PHAVU_003G211000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8528" checksum="7AD0F48287B30BB3" modified="2014-02-19" version="1">MQQQHKSHLTYCVMLTAMGLLTWCFLSVHVNHPNTKSVVLSVFFFKFIRAFGPTLVTIRETFTECPGPNSGIVIVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCB7</accession>
    <name>V7CCB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G231100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCB7"/>
    <dbReference type="SMR" id="V7CCB7"/>
    <dbReference type="STRING" id="3885.V7CCB7"/>
    <dbReference type="Gramene" id="ESW27774">
        <property type="protein sequence ID" value="ESW27774"/>
        <property type="gene ID" value="PHAVU_003G231100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWLCDME"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052610">
        <property type="entry name" value="bHLH_transcription_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959:SF25">
        <property type="entry name" value="BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="155"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="124"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="212"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="52"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="135"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="241"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="38430" checksum="9FFCF72F1A19323E" modified="2014-02-19" version="1">MTSMEESWTSWLCDMEPDDYSFISQSDIKVEDMIGSLASPCDIATALEENPQSSFSQESHSSVTESGIEERPLKLLKKTCTSNSAKTDQLSQKKASTPSSYILSFDNTNPPTAKVESLVKPETKVNRGIALPSKNEPKRVTQESKKTGSSARSSHHTQDHIIAERMRREKISQQFIALSALIPDLKKMDKVSVLGEAIRYVKELKEKVKVMEEQGKRKSQEPVMRGKKSQVCATADEDVSDTSSNSCELGNSDDPSSKTNLSLPEVEARVSKKNVLIRILCEKEKVVLVNIFREIEKLHLSVINSSALSFGSSVLDTTIVAEMEDEFKMSVKELAGNLRVGLMQFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCJ3</accession>
    <name>V7CCJ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">U1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G133900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCJ3"/>
    <dbReference type="SMR" id="V7CCJ3"/>
    <dbReference type="STRING" id="3885.V7CCJ3"/>
    <dbReference type="Gramene" id="ESW26611">
        <property type="protein sequence ID" value="ESW26611"/>
        <property type="gene ID" value="PHAVU_003G133900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2186">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNWIKNS"/>
    <dbReference type="OrthoDB" id="21474at2759"/>
    <dbReference type="PhylomeDB" id="V7CCJ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000122">
        <property type="term" value="P:negative regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1490.490:FF:000001">
        <property type="entry name" value="cell growth-regulating nucleolar protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:001583">
        <property type="entry name" value="UBP1-associated proteins 1C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039999">
        <property type="entry name" value="LYAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003604">
        <property type="entry name" value="Matrin/U1-like-C_Znf_C2H2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058719">
        <property type="entry name" value="WHD_LYAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014898">
        <property type="entry name" value="Znf_C2H2_LYAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13100:SF10">
        <property type="entry name" value="CELL GROWTH-REGULATING NUCLEOLAR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13100">
        <property type="entry name" value="CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25879">
        <property type="entry name" value="WHD_LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08790">
        <property type="entry name" value="zf-LYAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12874">
        <property type="entry name" value="zf-met"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00451">
        <property type="entry name" value="ZnF_U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51804">
        <property type="entry name" value="ZF_C2HC_LYAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="U1-type" evidence="9">
        <location>
            <begin position="92"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="123"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="64"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="135"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="154"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW26611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="35073" checksum="5D6B1E23C6C9B640" modified="2014-02-19" version="1">MVWFQCEDCGDNLKKPKLSGHFRTCSAYKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLSAATATPNKDNKQRPEVDINVGLSERPPWFCSLCNTKATSKQALLLHADGKKHRAKARAFHASKQQPIQEDKYATDDAKAVVETGPNDEARDDKNVELPKLQKSSTENDSRPGNEISSAKKKRKLEALEDDLVKKSKNNTLVDMGNGEVIQGEKATGESNLKKEGMLKPHCTSAVKNKIKWKKFIKSALKSHPDGILKMKKLRKVVLKALQESGIAVDETELSEELEKKINSSSRFAVENKYVRLMAKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDQ5</accession>
    <name>V7CDQ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">WDR11 first beta-propeller domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G167000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDQ5"/>
    <dbReference type="STRING" id="3885.V7CDQ5"/>
    <dbReference type="Gramene" id="ESW27021">
        <property type="protein sequence ID" value="ESW27021"/>
        <property type="gene ID" value="PHAVU_003G167000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1912">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMFSSRW"/>
    <dbReference type="OrthoDB" id="1291858at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:002559">
        <property type="entry name" value="Os02g0136933 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057852">
        <property type="entry name" value="Beta-prop_WDR11_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039694">
        <property type="entry name" value="WDR11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14593">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14593:SF5">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23751">
        <property type="entry name" value="Beta-prop_WDR11_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WDR11 first beta-propeller" evidence="2">
        <location>
            <begin position="25"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="486" mass="53461" checksum="EDA12FDCDAEB0CF7" modified="2014-02-19" version="1" fragment="single">MLASPRAPPTVTAQPQESWESMLPGPPSRNNFGSADLSPHGLMAFPSGSSISIVDTRSMQLLSSFPIPPPPSSAAPFVTALRWSPLPLSRHLLSSEPSSNHLLLAAADRQGRIALLDFRLKSAILWFDTDSKKGVQDLCWAQARPDSYLLAAINGPSTLSLYNASTGRCFWKYDASPEYLSCVRRDPFDSRHICAVGLRGFLLSVVLLGDTDDAVVIKELQIPTDSSELAKFERDATAGSSTSAVVSPAAAAFPSYVARLAFSQQWRHILFVTFPRELVVFDLQYETVVFSTALPRGCGKFLDVLPDPSNDWIYCAHRDGKLSTWRRKTGEQAHSMYSLEELMPSVGTSVPSPSILSVLLCQSDSTFQNIGKDYSDVPSSPYLREDFDNPFDFCYESNIVSKIHLISISDDGKIWNWLLAAEGLADTQKDDKKLDLVNDDHKVLFPRANSNTLASSSGGRDLNVGNNNRSRLQSSIFDQEEISMKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE27</accession>
    <name>V7CE27_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G210400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DDA1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE27"/>
    <dbReference type="SMR" id="V7CE27"/>
    <dbReference type="STRING" id="3885.V7CE27"/>
    <dbReference type="Gramene" id="ESW27534">
        <property type="protein sequence ID" value="ESW27534"/>
        <property type="gene ID" value="PHAVU_003G210400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW27535">
        <property type="protein sequence ID" value="ESW27535"/>
        <property type="gene ID" value="PHAVU_003G210400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ5K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEDQHIQ"/>
    <dbReference type="OrthoDB" id="445357at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080008">
        <property type="term" value="C:Cul4-RING E3 ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032436">
        <property type="term" value="P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.720.30">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033575">
        <property type="entry name" value="DDA1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018276">
        <property type="entry name" value="DDA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003034">
        <property type="entry name" value="SAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036361">
        <property type="entry name" value="SAP_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31879">
        <property type="entry name" value="DET1- AND DDB1-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31879:SF2">
        <property type="entry name" value="DET1- AND DDB1-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10172">
        <property type="entry name" value="DDA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02037">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00513">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68906">
        <property type="entry name" value="SAP domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50800">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAP" evidence="3">
        <location>
            <begin position="122"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="67"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="138"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="72"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="143"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="157" mass="17148" checksum="40713F88A10FEA2E" modified="2014-02-19" version="1">MLMDAPNPSSSAASSFLANLPSRGHFSSTIVLSNPVGMRAYVCDHDTSPPEGQHIKTNQQNILIRSLTLKKQRGDSSSKDGSDGSRKRNAEKVLERSSAKKTNNQINSRQEGSNSQTATRDFHNLTVERLRALLKAKGLSTKGKKEELITRLKDATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE81</accession>
    <name>V7CE81_PHAVU</name>
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        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G215700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cornichon family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE81"/>
    <dbReference type="SMR" id="V7CE81"/>
    <dbReference type="STRING" id="3885.V7CE81"/>
    <dbReference type="Gramene" id="ESW27595">
        <property type="protein sequence ID" value="ESW27595"/>
        <property type="gene ID" value="PHAVU_003G215700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2729">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKKECFI"/>
    <dbReference type="OrthoDB" id="434393at2759"/>
    <dbReference type="PhylomeDB" id="V7CE81"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003377">
        <property type="entry name" value="Cornichon"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12290">
        <property type="entry name" value="CORNICHON-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03311">
        <property type="entry name" value="Cornichon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01398">
        <property type="entry name" value="Cornichon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="137" mass="16220" checksum="E843D5E510B643B3" modified="2014-02-19" version="1">MADLFAWLISFFIIIALIVLVIYQLMCLADLEFDYINPYDSSSRINKVVLPEYIIVGVLCGFYLVTGHWIMSLLCAPYLYYNVRLYRQGKHLIDVTEIFNLLSKEKKQRLVKLFYLVLILFLSLFWMIYTSLDDHDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEJ8</accession>
    <name>V7CEJ8_PHAVU</name>
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        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G232300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEJ8"/>
    <dbReference type="SMR" id="V7CEJ8"/>
    <dbReference type="Gramene" id="ESW27788">
        <property type="protein sequence ID" value="ESW27788"/>
        <property type="gene ID" value="PHAVU_003G232300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWAPELP"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="PhylomeDB" id="V7CEJ8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000015">
        <property type="entry name" value="Transcription factor RAX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000283">
        <property type="entry name" value="Transcription factor RAX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48000:SF67">
        <property type="entry name" value="MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48000">
        <property type="entry name" value="OS09G0431300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="9"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="9"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="63"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="63"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW27788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="323" mass="36446" checksum="9106C1B4782246CC" modified="2014-02-19" version="1">MGRAPCCDKANVKRGPWSPEEDAKLKSYIEDHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKQRKEQHAHARRVGGLKQEIKRESEDLMLPVGVISRTPCWPHEQNSWPIPVANACLQYYDLNNKTSSIVHIPDNTVTATMNSQYSSFDISLTQDQLYPSTGNMITTDTCHTSNVFQGFGNFSSDFACVNSQQMDGSELVFYGMESMEIANGSTNTNSTESTSWGDIISSMVYPPLVSHYEACQQRIMPQDVTFEESSYFAMRTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGN4</accession>
    <name>V7CGN4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Hydroxyproline-rich glycoprotein family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G286300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGN4"/>
    <dbReference type="STRING" id="3885.V7CGN4"/>
    <dbReference type="Gramene" id="ESW28435">
        <property type="protein sequence ID" value="ESW28435"/>
        <property type="gene ID" value="PHAVU_003G286300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZJZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DRTDPHP"/>
    <dbReference type="OrthoDB" id="1936969at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037699">
        <property type="entry name" value="At5g65660-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34291:SF11">
        <property type="entry name" value="GLYCOPROTEIN FAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34291">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW28435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="134" mass="14814" checksum="40AEFB193F6F9E99" modified="2014-02-19" version="1">MDTPDLSPPPHVDASRPSLGFPLGTALLLIIIFTLSGVLSCCYHWDRLRSVRQSQSQSQSDPQMHSDPTKSKPPTELRQNRGQSLPVLMPGDDVPKFIAMPCPCQPSRPDNIVVTVELEKQPPKPPQLPVPLYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK46</accession>
    <name>V7CK46_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fringe</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G1591001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK46"/>
    <dbReference type="STRING" id="3885.V7CK46"/>
    <dbReference type="Gramene" id="ESW30514">
        <property type="protein sequence ID" value="ESW30514"/>
        <property type="gene ID" value="PHAVU_002G1591001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESHYEKE"/>
    <dbReference type="OrthoDB" id="421979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006740">
        <property type="entry name" value="DUF604"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10811">
        <property type="entry name" value="FRINGE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04646">
        <property type="entry name" value="DUF604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="215" mass="25128" checksum="E3930B547C425F93" modified="2014-02-19" version="1" fragment="single">YDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEALQRLTIPMKLDSASLVQQSICYDKKRKWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKLNSTLNQTLTEYERHLVPHPECHWQMPDPSQLQKIEVHKKPDPLLWDRAPRRNCCRVKKTNKTGIMKIDVGICRDGEIHEPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKE6</accession>
    <name>V7CKE6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nodulin-related protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G168000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKE6"/>
    <dbReference type="SMR" id="V7CKE6"/>
    <dbReference type="STRING" id="3885.V7CKE6"/>
    <dbReference type="Gramene" id="ESW30614">
        <property type="protein sequence ID" value="ESW30614"/>
        <property type="gene ID" value="PHAVU_002G168000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1DM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNFISDQ"/>
    <dbReference type="OrthoDB" id="695806at2759"/>
    <dbReference type="PhylomeDB" id="V7CKE6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010115">
        <property type="term" value="P:regulation of abscisic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040294">
        <property type="entry name" value="Nodulin-rel_1/2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35098">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35098:SF1">
        <property type="entry name" value="NODULIN-RELATED PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="106"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="116" mass="12044" checksum="20083BF88CE1F4F8" modified="2014-02-19" version="1">MASDETQNKVIEPSSSDLLASAKLVANAAQSTLRNESDKVDKTKVADAAGDLLDAAGKYGKLDDQKGVGQYVDKAADYLHQYQDKAAAPSQPADSKPEESGGLGGLANLAGGFFKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMN2</accession>
    <name>V7CMN2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cupin type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G239800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Protein storage vacuole</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the 11S seed storage protein (globulins) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMN2"/>
    <dbReference type="STRING" id="3885.V7CMN2"/>
    <dbReference type="Gramene" id="ESW31462">
        <property type="protein sequence ID" value="ESW31462"/>
        <property type="gene ID" value="PHAVU_002G239800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUW2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WFNDGES"/>
    <dbReference type="OrthoDB" id="735591at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000326">
        <property type="term" value="C:protein storage vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045735">
        <property type="term" value="F:nutrient reservoir activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="cupin_11S_legumin_N"/>
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        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="2"/>
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        <property type="entry name" value="11S_seedstore_pln"/>
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        <property type="entry name" value="RmlC-like_jellyroll"/>
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        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
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        <property type="entry name" value="Seed_Storage-Functional"/>
    </dbReference>
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        <property type="entry name" value="OS03G0336100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31189:SF45">
        <property type="entry name" value="OS09G0552500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="2"/>
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        <property type="entry name" value="11SGLOBULIN"/>
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    </dbReference>
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        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="2"/>
    </dbReference>
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    <keyword evidence="4" id="KW-0926">Vacuole</keyword>
    <feature type="domain" description="Cupin type-1" evidence="9">
        <location>
            <begin position="7"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="9">
        <location>
            <begin position="192"/>
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        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004558"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00007178"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
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    </evidence>
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        <source>
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    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW31462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="32171" checksum="F99C8277FB3FEB58" modified="2014-02-19" version="1">MELDLTPKLAQPMFEGDGGGYYTWSSSQMPVLAATNVGAGRLLLHPRGFALPHYADSSKIGYVIQGSDGVVGMVLPNTEQEVVLKVKQGDVLPVPIGSVSWWFNNGDSDLTIVFLGETSKALIPGQFTYFFLSGVIGVIGGFSTELTSKVYDLDKDEVQKLTKSQTGVLIVKLDETQTLPKPHMDMTKKLVYNIDAACTQNVVENAGLVKTLTEKGFPFIGEVGLSVIRVKLEPGAIKAPSYPATTTIQLIYIARGSGSIEIVGLNGERALDAQVKAGELLVVPQFYVVAKIAGEEGMES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP48</accession>
    <name>V7CP48_PHAVU</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G278800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Virion</location>
        </subcellularLocation>
    </comment>
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    </dbReference>
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        <property type="gene ID" value="PHAVU_002G278800g"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <source>
            <dbReference type="ARBA" id="ARBA00004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="224" mass="25198" checksum="A3E2602B1F913B06" modified="2014-02-19" version="1">MTEINPKYAHVSDTMDMNGTMSSSDDFLDNSHLGKTAILLDRCDDKFIARLGRKTIPMMVSGFSQRAAGAIFVLAYALKDSADGDYVFDMPAEALLLEDILYEELPNKMPATNRAHAPMPKMNNNAEEAQAYSYLAASLLRLFRTNEDNYIGAFNHIVTEYSRFYNKQMPIAPPQPTLEGIRTLSNYFSGDSVFKTTLFRILYCGGGIKKAKRLRSFLYESHLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PHAVU_002G287300g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
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        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
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            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW32032"/>
        <property type="gene ID" value="PHAVU_002G287300g"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Chromosome 2"/>
    </dbReference>
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        <property type="entry name" value="CLE14-like"/>
    </dbReference>
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    </dbReference>
    <dbReference type="PANTHER" id="PTHR35472:SF4">
        <property type="entry name" value="DUF19 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756017" evidence="1">
        <location>
            <begin position="39"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="97" mass="10993" checksum="D7075E6E691B2A0B" modified="2014-02-19" version="1">MFLTTHKTAVMAVQYSRLSLLILMTILMLSQLSSCCKAGRWMNKEIKQKEKSTSSQRLSISWHFYTKTQQGPSTEKVHPLYGVSLRDVPGGPNPLHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPR8</accession>
    <name>V7CPR8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PB1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G220700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPR8"/>
    <dbReference type="STRING" id="3885.V7CPR8"/>
    <dbReference type="Gramene" id="ESW31230">
        <property type="protein sequence ID" value="ESW31230"/>
        <property type="gene ID" value="PHAVU_002G220700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVUK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIGYHHL"/>
    <dbReference type="OrthoDB" id="1938580at2759"/>
    <dbReference type="PhylomeDB" id="V7CPR8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd06410">
        <property type="entry name" value="PB1_UP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000058">
        <property type="entry name" value="Octicosapeptide/phox/Bem1p domain kinase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053198">
        <property type="entry name" value="Gynoecium_Dev_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000270">
        <property type="entry name" value="PB1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066">
        <property type="entry name" value="OS05G0427100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31066:SF33">
        <property type="entry name" value="OS07G0556300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00564">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00666">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PB1" evidence="2">
        <location>
            <begin position="46"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="194"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="244"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="195"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW31230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="46632" checksum="27D2AAB74BE92DC1" modified="2014-02-19" version="1">MTSHSHYQPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSTLILKLSKLSGMANITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRTSSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETHQRDPRPKDRPVLQDNVSVSDPGSPAPVVSSPYCSTSSAPCVPSLPNLPPVKTKLSNPVPDSDFKESPIEPETEPQPNLNHNLYPGNPVIHYPQEPAYSAHSVNPVPVYYVPSPVRPGTVPVPLQQTPYPYVQQPYHAVMPSQVPIGYHHLIPGSGQVYGAGVRQVSPLQPYNPSAAVVHDGFKQHMYQAVPNSGPVPLHPMMPMTGADEPKRGGAEYVVGRGPNSLNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPZ5</accession>
    <name>V7CPZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G299600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CPZ5"/>
    <dbReference type="STRING" id="3885.V7CPZ5"/>
    <dbReference type="Gramene" id="ESW32174">
        <property type="protein sequence ID" value="ESW32174"/>
        <property type="gene ID" value="PHAVU_002G299600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4430">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAWHRDW"/>
    <dbReference type="OrthoDB" id="21204at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15315:SF26">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE NRDP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15315">
        <property type="entry name" value="RING FINGER PROTEIN 41, 151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="33"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="6">
        <location>
            <begin position="65"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="319"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="494"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="924"/>
            <end position="987"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1163"/>
            <end position="1182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="924"/>
            <end position="955"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1163"/>
            <end position="1175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1287" mass="142276" checksum="8B51F55390898CA2" modified="2014-02-19" version="1">MEADFVTNDILSLTHDAFDANDNDDEAMEGETCGICMDMVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGNNKVEDDSLLRDDDDWSIEGKNNTLSFPSYYIDENAVICLDGDDCKVRNGLATVEGDSDLSTSIACDSCDIWYHAFCVGFDTESMSDNTWLCPRCVADDVSKGASNSMERTTVDCNADNSNNECHAEDSFSGKVSVSVADTGETAVVVSMVDRTKWVPATSEKSLLPFEVGGDPMTESCILMFDTNDQQSGEIRTNSLPIMEEEELELSLSNNLSCSLTSMSLVHNDLEKSTSGAMNEPSPLDGTKFLDESHTKTSPSRIESNMGLDLGLSVGSFLSVDNADKSEPKDQATIVPCLTSEECFSKGDDIEVNACKDNVRVAGGKRKHADYSSEQVHIKAEDGDAEPELPDEVVPKKIKATDRQMSNTNDTANDHLLENATKHSALKHPPTKPTVTPDIMNIVKGTDRRLSKGHSDTNACDKSSESKGNMAGLRVKKIMKRNSEDRESSLVVQNLRKEIREAVRNKSSINFEDNHFDPKLLEAFRTAITGPKTELVNKLSPAAMKAKKSMLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCMRATKPEKIETLKSVLDLLRKGSDGPESKQASECQTKNPILSRLYLADTSVFPRKQDVKPLSVLKTVDNSEQTKQNNPSEKVPNLSVNNNTIKATDVNYLLSKISFVSSEKKVDKKIVHGPVGDNSTSGKIRLNNHLERTPISSAGAKTGTKELGLKSGCMKNDKRKWALEVLARKTATTSGNTANGNQEENAIFKGHYPLLAQLPIDMRPTLAPSRHNKIPISVRQTQLYRLTERLLKNTNLSVIRRTGITELAVADAINIEKEVADRSNSKLVYLNLCSQELLHRTSNTTSDVASDTSPPASSAMLTDQQSELNTDDLSANPEVETALKNAGLLSDSPPSSPHDNRETCNGDMLGPDNILELDSHPDLDIYGDFEYDLEDEDYIGASVTQVSKPKQEQNESKVKLVFSTMNLKKSDIALDCADCEGSERKEVPGEASCSPNCHNDAVHRDRASVSSELLPFESAVEPLDTEFEDLLYGPDKEPLIKKFPAGESRSLHGDGKTETLSVADDYHNDVQHALDNAVKASERGNENLTEKVSDTTITDQSSNISEAGESFQRKEEKSDVTAKQIDSVNHITKKVEVYIKEHIRPLCKSGVITADQYRWAVAKTTEKVMKYHCKAKNANFLIKEGEKVKKLAEQYAEAAQQNRKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR52</accession>
    <name>V7CR52_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Calmodulin-binding family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G237000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR52"/>
    <dbReference type="SMR" id="V7CR52"/>
    <dbReference type="Gramene" id="ESW31416">
        <property type="protein sequence ID" value="ESW31416"/>
        <property type="gene ID" value="PHAVU_002G237000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRIN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWLQCQS"/>
    <dbReference type="OrthoDB" id="7344096at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044159">
        <property type="entry name" value="IQM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31250:SF14">
        <property type="entry name" value="IQ DOMAIN-CONTAINING PROTEIN IQM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31250">
        <property type="entry name" value="IQ DOMAIN-CONTAINING PROTEIN IQM3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW31416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="690" mass="77876" checksum="4A3B31CCCF580CF0" modified="2014-02-19" version="1">MENASSCTLIPTLQFSGPRIAQVSADWFCCHMGISFSCPFAEYNDVEDGLDSVVVKSINFGNDEIKTPVRSVSFKKEDLEPTILRSLGSGKMTIEASVSFKRKDIDDIVATNTLSFDKEKNMPISRTKKSKDMDNLSFKSESQEETIQSALQNPSSPKHIAALKLQKVYKSFRTRRKLADCAILVEQSWWKLLDFAELKRSSISFFDIEKHETAVSRWSRARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHFYYDKWFQCQSREPFFYWLDIGEGKEVNLEKCPRSKLQQQCIKYLGPMERLSYEVVVEDGKFFYKQSGELLNTTGKDAHAKWIFVLSTSKTLYVGKKSKGSFQHSSFLAGGATSSAGRLVIEHGVLKAVWPHSGHYRPTAENFKEFISFLQENNVSLSDVKMDPVDEADELRSLRSGHLRSHSSEEDFTENMNGLEIEETIIEGSVAAEKANLIQTERPSAVMTPSPRHFQILGRELSKLEIPNRGHAFEGLENEVKGVEQNCESFQMEPHSVVQEATQAFASELEHAMAEKNSCDDNDVETIPQESILKRINSHKDMKSYQLGKQLSCKWTTGAGPRIGCVRDYPCELQFRALEQVNLSPRSGSRYKSSLTHRSTTLLNSSLSNVASLCGDTTIEPLHMPQRGEHNNSRSECSPLFRGSSVIPVIHTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR96</accession>
    <name>V7CR96_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G010800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the thioredoxin family. Plant H-type subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR96"/>
    <dbReference type="SMR" id="V7CR96"/>
    <dbReference type="STRING" id="3885.V7CR96"/>
    <dbReference type="Gramene" id="ESW32707">
        <property type="protein sequence ID" value="ESW32707"/>
        <property type="gene ID" value="PHAVU_001G010800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIHYVTD"/>
    <dbReference type="OrthoDB" id="10263751at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016671">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000104">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050620">
        <property type="entry name" value="Thioredoxin_H-type-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10438:SF453">
        <property type="entry name" value="THIOREDOXIN H4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="6" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="8">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW32707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13177" checksum="CEC6807154279A74" modified="2014-02-19" version="1">MAEEGQVIAVHTLEAWQEQFQKGEDSKKLVVVDFTASWCGPCRFIAPILAEIAKKTPEAIFLKVDVEELSTVAEKWSIEAMPTFFFLKEGKLVDRIMGAKKEELQGTIDKHLSHTAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRK8</accession>
    <name>V7CRK8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G014000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRK8"/>
    <dbReference type="SMR" id="V7CRK8"/>
    <dbReference type="STRING" id="3885.V7CRK8"/>
    <dbReference type="Gramene" id="ESW32744">
        <property type="protein sequence ID" value="ESW32744"/>
        <property type="gene ID" value="PHAVU_001G014000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="6612291at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000325">
        <property type="term" value="C:plant-type vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051119">
        <property type="term" value="F:sugar transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17358">
        <property type="entry name" value="MFS_GLUT6_8_Class3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000043">
        <property type="entry name" value="sugar transporter ERD6-like 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044775">
        <property type="entry name" value="MFS_ERD6/Tret1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050549">
        <property type="entry name" value="MFS_Trehalose_Transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48021">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48021:SF23">
        <property type="entry name" value="SUGAR TRANSPORTER ERD6-LIKE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="174"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="279"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="346"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="380"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="420"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="452"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="10">
        <location>
            <begin position="50"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW32744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="486" mass="52360" checksum="761733F47F6DE72C" modified="2014-02-19" version="1">MSLREENEEGRDLKKPFLHTGSWYRMSGRQSSLFGSTQAIRDSSISVIACVLIVALGPIQFGFTAGYTSPTQAAIISDLGLSLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIASIPNIIGWLAISFANDSSFLYMGRLLEGFGVGIISYTVPVYIAEISPPNLRGGLVSVNQLAVTIGIMLAYLLGIFVEWRFLAILGILPCALLIPGLFFVPESPRWLAKMGMTEEFETSLQVLRGFDTDISAEVNEIKRSVASSSRRSTVRFADLKQRRYWLPLMIGIGLLILQQMSGINGVLFYSSTIFRNAGISSSDAATLGVGAVQVLATSLTLWLADKSGRRLLLIVSATAMTFSLLVVAISFYVKASISETSSMYGILSTLSVVGVVAMVIAFSLGMGAMPWIIMSEILPINIKGLAGSVATLANWLFSWLVTLTANMLLDWSSGGTFTIYALVCALTVGFVTIWVPETKGRSIEEIQLSFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRV4</accession>
    <name>V7CRV4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G022800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRV4"/>
    <dbReference type="SMR" id="V7CRV4"/>
    <dbReference type="STRING" id="3885.V7CRV4"/>
    <dbReference type="Gramene" id="ESW32854">
        <property type="protein sequence ID" value="ESW32854"/>
        <property type="gene ID" value="PHAVU_001G022800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4569">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWFNLLY"/>
    <dbReference type="OrthoDB" id="438440at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004806">
        <property type="term" value="F:triacylglycerol lipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044819">
        <property type="entry name" value="OBL-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46086">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46086:SF4">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="282"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="Fungal lipase-type" evidence="3">
        <location>
            <begin position="202"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="474" mass="54824" checksum="BDA4E8E35AB3BA5C" modified="2014-02-19" version="1">MDSKELFGGNYLQLKPEEASVVDLGILLFSSKLSNRKFIECTEEVEARDFRQRWLLFTSVVAQILLLATRNSFKKVENILELWLNLLSFNGGFIGLFLNFLRGKVKTAERSSASFLSVVGNTDTRVDLDKNIKQNDAKYKGFISMMASKLSYENEQFVGNTVRNLWNMEFMGLHSFWNDYQELWSTRAIILQDTKSEPNLIIVAFRGTEPFDADQWRTDVDISWYELPNMGRVHGGFMKALGLQKNSGWPKEIDQRSQHRYAYYTIREKLRTMLEANRDAKFILAGHSLGGALAILFAAVLSIHEEAWLLDKLEGVYTFGQPRVGDIKFGEFMKEKLRKYDVRYMRYVYCNDVVPRIPYDDKTLFFKHFGPCLYFNSFYKGQVLEEEPNKNYFSLFWVIPKIINAVWELIRGFLIPFVEGGGYIQNWFMTIIRIVGMIIPGIPAHLPPDYVNITRLGSLPEFSGLQNSQDSKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSQ7</accession>
    <name>V7CSQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PPPDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G046700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DeSI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSQ7"/>
    <dbReference type="SMR" id="V7CSQ7"/>
    <dbReference type="STRING" id="3885.V7CSQ7"/>
    <dbReference type="MEROPS" id="C97.A06"/>
    <dbReference type="Gramene" id="ESW33144">
        <property type="protein sequence ID" value="ESW33144"/>
        <property type="gene ID" value="PHAVU_001G046700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0324">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LYYWINE"/>
    <dbReference type="OrthoDB" id="412286at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101005">
        <property type="term" value="F:deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.30">
        <property type="entry name" value="PPPDE domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008580">
        <property type="entry name" value="PPPDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042266">
        <property type="entry name" value="PPPDE_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378">
        <property type="entry name" value="DESUMOYLATING ISOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378:SF17">
        <property type="entry name" value="OS06G0182100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05903">
        <property type="entry name" value="Peptidase_C97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01179">
        <property type="entry name" value="DUF862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51858">
        <property type="entry name" value="PPPDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPPDE" evidence="5">
        <location>
            <begin position="17"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="165"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW33144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="215" mass="24144" checksum="84F66C5F636A2F50" modified="2014-02-19" version="1">MLCKLVPVPRKRKSGLNPVYLNVYDLTPMNGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSILIGSTDMGAKEVRELMERMAEEYSGNTYHLIQKNCNHFCDDVCGKLTGKSTPRWVNRLARLGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKTRTHCSRYEASPNPPLSSSRRHCLPPSSVIIASPSSTLTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUF4</accession>
    <name>V7CUF4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">Protoporphyrinogen oxidase</fullName>
            <ecNumber evidence="4 11">1.3.3.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G0958001g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>protoporphyrinogen IX + 3 O2 = protoporphyrin IX + 3 H2O2</text>
            <dbReference type="Rhea" id="RHEA:25576"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
            <dbReference type="EC" id="1.3.3.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Plastid</location>
            <location evidence="11">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the protoporphyrinogen/coproporphyrinogen oxidase family. Protoporphyrinogen oxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.4" evidence="4 11"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUF4"/>
    <dbReference type="STRING" id="3885.V7CUF4"/>
    <dbReference type="Gramene" id="ESW33749">
        <property type="protein sequence ID" value="ESW33749"/>
        <property type="gene ID" value="PHAVU_001G0958001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1276">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ITCVSNQ"/>
    <dbReference type="OrthoDB" id="419752at2759"/>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009534">
        <property type="term" value="C:chloroplast thylakoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004729">
        <property type="term" value="F:oxygen-dependent protoporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004572">
        <property type="entry name" value="Protoporphyrinogen_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050464">
        <property type="entry name" value="Zeta_carotene_desat/Oxidored"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00562">
        <property type="entry name" value="proto_IX_ox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42923">
        <property type="entry name" value="PROTOPORPHYRINOGEN OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42923:SF44">
        <property type="entry name" value="PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC_MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54373">
        <property type="entry name" value="FAD-linked reductases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8 11" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 11" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amine oxidase" evidence="12">
        <location>
            <begin position="30"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU367069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW33749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="32884" checksum="D8FB7CCBDE33FD12" modified="2014-02-19" version="1" fragment="single">FGSVIAGALQSKLFSKREKTGENKTALKKNKHKRGSFSFQGGMQTLTDTLCKELGKENLKLNSKVLTLAYGHDESSSSQNWSITCVSNQSTQDVDAVIVTAPLCNVKDIKITKRSIPFPLNFLPEISYVPISVMITTFKKENVKRPLEGFGVLVPSKERQNGLKTLGTLFSSMMFPDRAPGDSYLYTTFVGGTQNRELAQASTDELQKIVTSDLRKLLGAEGEPTFVNHFYWSKGFPLYGRNYGSVVEAIDKMEKDLPGVFFAGNHKGGLSVGKSIASGWQAADLVITYLNSASTTVLDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUU1</accession>
    <name>V7CUU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G1116001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUU1"/>
    <dbReference type="Gramene" id="ESW33947">
        <property type="protein sequence ID" value="ESW33947"/>
        <property type="gene ID" value="PHAVU_001G1116001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2640">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPIEMDG"/>
    <dbReference type="OrthoDB" id="1899781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044794">
        <property type="entry name" value="APRL5/7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47126:SF3">
        <property type="entry name" value="5'-ADENYLYLSULFATE REDUCTASE-LIKE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47126">
        <property type="entry name" value="5'-ADENYLYLSULFATE REDUCTASE-LIKE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="232" mass="26210" checksum="E596CCEFB4F399E5" modified="2014-02-19" version="1" fragment="single">VDGNFIEGVLCTRKRVGYASVLFYASWCPFSHRILPEFETLSSMFPQVEHVALEQSSALPSLYSKYGIHSLPAILLVNQTSRVRYHGPNNLNSLVEFYARNTGLEARDKVVVGELSDLLSDEHSTIKGFSLGEISRREPYLALSILFLCLRIILSVFSTIMPHLKAFWSSYVRHLSLQKLGQVMERVLNVMDVRIWTKLELCKSRSFHERAKSARVWASSLASVSLGDSSAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVQ6</accession>
    <name>V7CVQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G131800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVQ6"/>
    <dbReference type="Gramene" id="ESW34184">
        <property type="protein sequence ID" value="ESW34184"/>
        <property type="gene ID" value="PHAVU_001G131800g"/>
    </dbReference>
    <dbReference type="OMA" id="FMETELY"/>
    <dbReference type="OrthoDB" id="1416326at2759"/>
    <dbReference type="PhylomeDB" id="V7CVQ6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="294" mass="33518" checksum="18832526967D0947" modified="2014-02-19" version="1">MATSSSTNAQPQVNSTLNIPPDTGNSSQNPLAGSTNLSSNSHTITIPQNHNINQTRITFRHVLSYYWWGVNHNMAYPTPPQIWLAQNVYPLMTPMRIICFIVSLISFMLACCFFMETELYTTHVSGGHNHARLVVFSVIVVHFLCVFFLLFFSFFTSAYERFNNQFFLKSIGEFVVMRVMSLLISGIEQKHQDGSSDVAEWVTCAFLTIDSLCIIILLKPGHNYSLLDATLTLTLHLGLEGQRIYAFTADAFVFVMMAIKNFLWLHIANMYGRDQEQLHLVWYDSHQTHHFSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVV3</accession>
    <name>V7CVV3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G141100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVV3"/>
    <dbReference type="STRING" id="3885.V7CVV3"/>
    <dbReference type="Gramene" id="ESW34302">
        <property type="protein sequence ID" value="ESW34302"/>
        <property type="gene ID" value="PHAVU_001G141100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S23Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MENGIGT"/>
    <dbReference type="OrthoDB" id="693270at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34055:SF7">
        <property type="entry name" value="NEUROFILAMENT MEDIUM POLYPEPTIDE-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34055">
        <property type="entry name" value="OS09G0491596 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15164" checksum="CF918EE4DBE9D886" modified="2014-02-19" version="1">MGRGRGKGKKQSVIAEDPGSGEEDKVPAYRRRGRPLKPLTDEIEEVEVTEIIEKDEENVKVNGSTNDLKTPAITVNKRKRKRSTQVKEKIDHLKEDNGILAKTGPDDSIKSTGFRQNGSRRKNKPRRAAEAGVDCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWB9</accession>
    <name>V7CWB9_PHAVU</name>
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        <recommendedName>
            <fullName evidence="14">F0F1 ATP synthase subunit A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_001G151500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase A chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWB9"/>
    <dbReference type="SMR" id="V7CWB9"/>
    <dbReference type="STRING" id="3885.V7CWB9"/>
    <dbReference type="Gramene" id="ESW34424">
        <property type="protein sequence ID" value="ESW34424"/>
        <property type="gene ID" value="PHAVU_001G151500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4665">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEGHHLT"/>
    <dbReference type="OrthoDB" id="1378527at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045259">
        <property type="term" value="C:proton-transporting ATP synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015078">
        <property type="term" value="F:proton transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015986">
        <property type="term" value="P:proton motive force-driven ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.220">
        <property type="entry name" value="ATP synthase, F0 complex, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045082">
        <property type="entry name" value="ATP_syn_F0_a_bact/chloroplast"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035908">
        <property type="entry name" value="F0_ATP_A_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42823">
        <property type="entry name" value="ATP SYNTHASE SUBUNIT A, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42823:SF3">
        <property type="entry name" value="ATP SYNTHASE SUBUNIT A, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81336">
        <property type="entry name" value="F1F0 ATP synthase subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="4" id="KW-0138">CF(0)</keyword>
    <keyword evidence="6" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="34"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW34424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="7555" checksum="9B9823D74DEF6A13" modified="2014-02-19" version="1" fragment="single">FFVPNVLFLFLLFGNILADELVVVVLVSLVPLVVPIHVMFLGLFTSGIQALIFATLAVAYISESIESHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CY55</accession>
    <name>V7CY55_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">COP9 signalosome complex subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G102200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CSN2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CY55"/>
    <dbReference type="SMR" id="V7CY55"/>
    <dbReference type="STRING" id="3885.V7CY55"/>
    <dbReference type="Gramene" id="ESW33831">
        <property type="protein sequence ID" value="ESW33831"/>
        <property type="gene ID" value="PHAVU_001G102200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1464">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEENWKD"/>
    <dbReference type="OrthoDB" id="194139at2759"/>
    <dbReference type="PhylomeDB" id="V7CY55"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008180">
        <property type="term" value="C:COP9 signalosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.570:FF:000011">
        <property type="entry name" value="COP9 signalosome complex subunit 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050871">
        <property type="entry name" value="26S_Proteasome/COP9_Components"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058796">
        <property type="entry name" value="COPS2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10678">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25983">
        <property type="entry name" value="COPS2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00753">
        <property type="entry name" value="PAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00088">
        <property type="entry name" value="PINT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0736">Signalosome</keyword>
    <feature type="domain" description="PCI" evidence="9">
        <location>
            <begin position="243"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW33831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="51457" checksum="E1E43427D8D857EC" modified="2014-02-19" version="1">MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEQEKAEWGFKALKQTVKLYYRLGRYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIFFDIGEYGRMSKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSKGMKKYTAIDKWNTQLKSLYQTISNRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0J8</accession>
    <name>V7D0J8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G211300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0J8"/>
    <dbReference type="STRING" id="3885.V7D0J8"/>
    <dbReference type="Gramene" id="ESW35153">
        <property type="protein sequence ID" value="ESW35153"/>
        <property type="gene ID" value="PHAVU_001G211300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2P8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AAEMWRQ"/>
    <dbReference type="OrthoDB" id="779250at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35985">
        <property type="entry name" value="OS07G0675200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35985:SF1">
        <property type="entry name" value="OS07G0675200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="233" mass="26149" checksum="7F4BD2D4E078111C" modified="2014-02-19" version="1">MQSRLVEATRRASSALSSTTRFTLKRGFCSGTRSRTADPEIHSGEQEAGPRVHRGQPQGISTNDNAKNAEIAETERRASKAHEMLKSPKSPCEPFPKLKSEGVNQRLDPNIQQKREHSWKGFEDLSCAGLDGSPWPEDENKGKEDDKDYYKHHKASPLSEIEFVDSRKPISRASHKTADSGRGVDVIGWLPEQMETAEETLLRAAEMWRQRAMCGDPDAPHSRVLRALRGEEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1Y3</accession>
    <name>V7D1Y3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G214700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1Y3"/>
    <dbReference type="SMR" id="V7D1Y3"/>
    <dbReference type="STRING" id="3885.V7D1Y3"/>
    <dbReference type="Gramene" id="ESW35196">
        <property type="protein sequence ID" value="ESW35196"/>
        <property type="gene ID" value="PHAVU_001G214700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0925">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKVYPLY"/>
    <dbReference type="OrthoDB" id="10253254at2759"/>
    <dbReference type="PhylomeDB" id="V7D1Y3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17973">
        <property type="entry name" value="DEXHc_DHX15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18791">
        <property type="entry name" value="SF2_C_RHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1080:FF:000003">
        <property type="entry name" value="Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:006066">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000951">
        <property type="entry name" value="Putative pre-mRNA-splicing factor ATP-dependent RNA helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1080">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011709">
        <property type="entry name" value="DEAD-box_helicase_OB_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044756">
        <property type="entry name" value="DHX15_DEXHc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048333">
        <property type="entry name" value="HA2_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007502">
        <property type="entry name" value="Helicase-assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF109">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DHX15 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21010">
        <property type="entry name" value="HA2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07717">
        <property type="entry name" value="OB_NTP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04408">
        <property type="entry name" value="WHD_HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00847">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="70"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="264"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="724" mass="82647" checksum="761E0AB05093BF63" modified="2014-02-19" version="1">MGMERKRKVSLFDVVDDSVAKIAKYNGGANNSVANALINHWNARPYTQRYFEILEKRKTLPVWHQKEEFLKVLKDNQTLILVGETGSGKTTQIPQFVLEAVQLETPDKRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGRLHPVEIFYTQDPERDYLEAGIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEISNLGDQVGPVKVVPLYSTLPPAMQQRIFEPPPPPLKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKQCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKSREKEKEQTRSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P2A7</accession>
    <name>A0ACC3P2A7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L009143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="490" mass="54420" checksum="BE50CBEC7E4E92D9" modified="2026-01-28" version="1">MEYSAESLGRDLKSVRKYFGSGKTKEESWRESQLKGLQNFLVEREEEILRALKKDLGKHYVEAFRDEVGTLGKALNFAKKHLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIEGGPEVGKLLLEQQWDKIFFTGSARVGRIVMSAASVHLTPVTLELGGKCPALVDSLTSSWDREVAVKRVLVAKFGACAGQACIAIDYVLVEKSFSSTLVTLMKAGIKKMFGENPKESNTVARIVNHKHFMRLKNLLTDPRVKDSVVYGGSMNEKDLFIEPTILLNPPLDSPIMADEIFGPVLPIITVEKIEDSIEFINSRPKPLAIYAFTKNKTLHKRLLSETSSGSLVFNDAILQYVVDTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYFTDFWYRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKRSKRSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>T2DLR9</accession>
    <name>T2DLR9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">alcohol dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G067300g</name>
    </gene>
    <organism evidence="14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="14">Pod</tissue>
        </source>
    </reference>
    <reference evidence="15" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a primary alcohol + NAD(+) = an aldehyde + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10736"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15734"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a secondary alcohol + NAD(+) = a ketone + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:35681"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="KF033366">
        <property type="protein sequence ID" value="AGV54356.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DLR9"/>
    <dbReference type="SMR" id="T2DLR9"/>
    <dbReference type="STRING" id="3885.T2DLR9"/>
    <dbReference type="Gramene" id="ESW33413">
        <property type="protein sequence ID" value="ESW33413"/>
        <property type="gene ID" value="PHAVU_001G067300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVYWWDV"/>
    <dbReference type="OrthoDB" id="417550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051903">
        <property type="term" value="F:S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046294">
        <property type="term" value="P:formaldehyde catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08301">
        <property type="entry name" value="alcohol_DH_plants"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000007">
        <property type="entry name" value="Alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:001292">
        <property type="entry name" value="Alcohol dehydrogenase class-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880:SF26">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE CLASS-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Alcohol dehydrogenase-like N-terminal" evidence="13">
        <location>
            <begin position="34"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Alcohol dehydrogenase-like C-terminal" evidence="12">
        <location>
            <begin position="206"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="AGV54356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW33413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="41355" checksum="B5A22668E42ACBC8" modified="2013-11-13" version="1">MSATAGKVIKCRAAVAWEPEKPLSIENIEVAPPGKGEVRLKILFNSLCRTDVYWWDVKGQNPLFPRILGHEASGIVESVGEGVTHLKPGDHALPIFTGECGECKYCKSEESNLCEVLRINSDRGVMLSDGKTRFSKNGQPIYHFLGTSTFSEYTVLHAGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNDTVAVFGLGAVGLAACEGARVSGASRIIGVDLLPSRFEQAKQFGVTEFVNPKEHNKPVQEVIAEMTDGGVDRAIECTGNIQASISALECTHDGWGVAVLVSVPKKDAEFKTHPMKFMEGRTLKGTFYGHYKPRTDIPSVVEKYLNKELELDKFITHTVPFSEINKAFDLMLRGEGIRCLICMEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADY3</accession>
    <name>V7ADY3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G015400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADY3"/>
    <dbReference type="Gramene" id="ESW03455">
        <property type="protein sequence ID" value="ESW03455"/>
        <property type="gene ID" value="PHAVU_011G015400g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1749484at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW03455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="71" mass="8769" checksum="DF6E559C0CA44661" modified="2014-02-19" version="1">MRECEEYLGDVLYGDDDLVEMKDFMYREDVVESMRRERESKELKNREKRRRSSCCTECFCFLTLLRAFFNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGF2</accession>
    <name>V7AGF2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phospholipid:diacylglycerol acyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G088800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGF2"/>
    <dbReference type="STRING" id="3885.V7AGF2"/>
    <dbReference type="Gramene" id="ESW04360">
        <property type="protein sequence ID" value="ESW04360"/>
        <property type="gene ID" value="PHAVU_011G088800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2369">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNISPAF"/>
    <dbReference type="OrthoDB" id="190846at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008374">
        <property type="term" value="F:O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003386">
        <property type="entry name" value="LACT/PDAT_acylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11440">
        <property type="entry name" value="LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02450">
        <property type="entry name" value="LCAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="614" mass="68893" checksum="1E54116B1B248D86" modified="2014-02-19" version="1">MYVGGKLKKFCLVEPLKNSSIGFQSVKVERKRQKKQKNGQCKERRCIDYWFWVIGYMCTTWWFLSLLYGCLSATLLGFEAPVSPGVRLSREGVTALHPVVLVPGIVTDGLELWEGRSCAEGLFRKRLWGDGLAQILKRPLCWLEHLSLHDETGLDPPGIKVRAVPGVVAADNFASGYLVWADLIENLARIGYEGKNLYMAAYDWRLSFQNTEIRDQSLSTLKSNVELMFETNGYKKVVVVPQSIGAIYFLHFLKWVEAPPPMGGGGGPGWCDKYIKSILNISPAFLGVPRAFSNILSTEGSFGFMMESLNFRRAVAFGITNFDYLGRHTLELIMKVFRTWDSTVSLMPKGGKTIWGDLNWCPEEWNNYDQEISRGGNSATFNLSRKAVWTDNDDISRKSIPEVTKNRAYIARTAFDLPNFVAPTMMKRGEAHFSYGIAENLEDPKYAHYKYWSNSLETKLPNAPDMEIYCLYGVGIPHEKLVPSDKSKSIPFQFDGPEDGKEESWSQNGVYSVDGDESVSIVSSGFMCVKGWRGRTRFNPSGLATYAREYLVKQRGSLIDRSRVLSGKSSNIVGNVALIEDVLLVAGGATGVDIGGDRIFSDIMRMSERINLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AH25</accession>
    <name>V7AH25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G106100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AH25"/>
    <dbReference type="SMR" id="V7AH25"/>
    <dbReference type="STRING" id="3885.V7AH25"/>
    <dbReference type="Gramene" id="ESW04565">
        <property type="protein sequence ID" value="ESW04565"/>
        <property type="gene ID" value="PHAVU_011G106100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQDM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="665283at2759"/>
    <dbReference type="PhylomeDB" id="V7AH25"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045868">
        <property type="entry name" value="Znf_C3H13/40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38160">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38160:SF1">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="6">
        <location>
            <begin position="6"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="54"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="99"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="111"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="47295" checksum="C43A05394BD50276" modified="2014-02-19" version="1">MVERKQFKTKLCVLYQRGRCNRHNCSFAHGNSELRRFPASFSGRRDYLGNDLRDKLDRRNLSPRRYSPAQDARGRQSIREYSPPRSLENKRRHRRKQGITGQSDTSGNLKASDRVQDEVKERKMLSSGSRNTLEEQLKKVDSGIGVLQNRKFQLEVYLDESIQEVDSLKSRIQELEAQLCKEDEECKRITSRIRKFVRVHNHSSQLQDELKRSQVRLQRFGDQLVSEISKIGANEDLSIDIVSNGENTGLLPIVKHVEHNDASSHRKRLHIERDALEDLKQDRSKDGHLVETGRTKKRSRWNISDQLNDESLGGPDNATEVIRVLDPEGRHKRGLKQPRIEVPSTSMAAHVADDDVDIELYNGTDVNETANTENENGVPYKVKAAPLMLPPALIPRSNYSKYEGNDENVDVDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJS9</accession>
    <name>V7AJS9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Carboxypeptidase</fullName>
            <ecNumber evidence="9">3.4.16.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G087900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase S10 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.-" evidence="9"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJS9"/>
    <dbReference type="SMR" id="V7AJS9"/>
    <dbReference type="STRING" id="3885.V7AJS9"/>
    <dbReference type="MEROPS" id="S10.017"/>
    <dbReference type="Gramene" id="ESW04351">
        <property type="protein sequence ID" value="ESW04351"/>
        <property type="gene ID" value="PHAVU_011G087900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1283">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QEPKEVW"/>
    <dbReference type="OrthoDB" id="443318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004185">
        <property type="term" value="F:serine-type carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000123">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001563">
        <property type="entry name" value="Peptidase_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018202">
        <property type="entry name" value="Ser_caboxypep_ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802:SF3">
        <property type="entry name" value="RETINOID-INDUCIBLE SERINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802">
        <property type="entry name" value="SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00450">
        <property type="entry name" value="Peptidase_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00724">
        <property type="entry name" value="CRBOXYPTASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00131">
        <property type="entry name" value="CARBOXYPEPT_SER_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 9" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5006531163" description="Carboxypeptidase" evidence="9">
        <location>
            <begin position="26"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW04351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="458" mass="51055" checksum="98D7C9531D327CED" modified="2014-02-19" version="1">MEKVPHLLSIFLFIALLFHGGKVLAFKTQDGSEEWGYVPVRPKAHMFWWLYRSPYRVEDPSKPWPIILWLQGGPGASGVGIGNFEEVGPLNTDLKPRNSTWLQKADLLFVDNPVGTGYSFVEDKKLFVKTDNEAATDLTTLLIELFNKNEKLQKSPLFIVAESYGGKFAVTLGLSALKAIEAGKLKLILGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSNSVAERIKQQLEDGKFVEATDSWSELESVISMSSNFVDFYNFLEDAGSDDVAALELGLYKKISTKRYSRYLTSLRSRSKSPGGDNDLDKLLNGVIKKKLKIIPENVTWGGQSGDVFEYLSGDFMKPRIDEVDELLAKGVNVTVYNGQIDLICSTKGTDAWVHKLKWEGLKNFLAKDRTPLYCGSDKSTTKGFVRSYKNLHFYWILKAGHFVPTDQPCVALDMVGAITHSPAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJW7</accession>
    <name>V7AJW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Subtilisin-like protease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G190300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJW7"/>
    <dbReference type="Gramene" id="ESW05565">
        <property type="protein sequence ID" value="ESW05565"/>
        <property type="gene ID" value="PHAVU_011G190300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU9V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IDRSFHS"/>
    <dbReference type="OrthoDB" id="10256524at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 9" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Peptidase S8/S53" evidence="10">
        <location>
            <begin position="44"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="11">
        <location>
            <begin position="578"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="463"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="678" mass="72982" checksum="F0047776C5CF6102" modified="2014-02-19" version="1" fragment="single">TGGDGVVSVFPDPVLELHTTRSWDFLESDLGMKLSKTLIQHSSSDTIIAVIDTGIWPESPSFRDEGIGEIPARWKGVCMESHDFKKSNCNRKLIGARYYNIQAAPGSNQTHIEATKDSPRDSVGHGTHTASIAAGVYVNNASYYGLAPGTARGGSPSARIAAYRTCSEEGCSGATILKAIDDAVNDGVDVISISIGLSSLFQADFLSDPIAIGAFHAEQMGVMVVCSAGNDGPDPFTVVNSAPWIFTIAASNIDRNFQSTIVLGNGKYFQGSGINFSNLTHSKMHSLVFAEQVAAKFAPASEARNCYPGSLDYSKIAGNIVVCANDDPTVSRRIKKLVVQDGRALGLILIDEDNKDVPFDAGVFPFTEVGNLEGHQILQYINSTKNPTATILPTAEVARYKPSPIVASFSSRGPSSLTENILKPDIMAPGIGILAAMIPKSTEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHQNWTPSMVKSALMTTATNYNNLRKPLTNSSNYIADPHEIGVGEINPLRALHPGLVFETTMEDYLRFLCYFGYSQNKVRSMSKTNFNCPKNSSEDLVSNINYPSVSISTLKRQQKPKVITRTVTNVGSLNATYTAKVRSPEGLVVKVIPNKLVFSEGVQRITYKISFYGKEANGGYNFGSLTWLDGHHYVHTVFAVKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK40</accession>
    <name>V7AK40_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G008600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK40"/>
    <dbReference type="SMR" id="V7AK40"/>
    <dbReference type="STRING" id="3885.V7AK40"/>
    <dbReference type="Gramene" id="ESW05972">
        <property type="protein sequence ID" value="ESW05972"/>
        <property type="gene ID" value="PHAVU_010G008600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV7I">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAFHHAP"/>
    <dbReference type="OrthoDB" id="515004at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35731">
        <property type="entry name" value="8-AMINO-7-OXONONANOATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35731:SF4">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="243" mass="27169" checksum="D62BCE2E2BB58B50" modified="2014-02-19" version="1">MIALKPIVHASLHAFHHAPPHNVRGSVWCVCRSKESDSEGSPAEGDAKSQELLAQIAMLQTQKVRLTDFLDERSAYLSQFGEEAKAEFDKIGEDALKELDEAGARITANIESEMLAFEESSELNRVEIEESEKKIEEFEGQMEKNRNEGLFFKNLGEKALDDKEKKPKEKVEKIKEVNTENSGSGKTRKNVYLFFIGLLSLGIVDSFASSSGADWKRVSVLGGVLVVLFSLFINEQNKDNQKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK99</accession>
    <name>V7AK99_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_011G166400g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RLP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK99"/>
    <dbReference type="SMR" id="V7AK99"/>
    <dbReference type="STRING" id="3885.V7AK99"/>
    <dbReference type="Gramene" id="ESW05273">
        <property type="protein sequence ID" value="ESW05273"/>
        <property type="gene ID" value="PHAVU_011G166400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUAH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LERFWIT"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000430">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase PEPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000041">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000619">
        <property type="entry name" value="Putative leucine-rich repeat receptor-like protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000358">
        <property type="entry name" value="Putative leucine-rich repeat receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48052:SF60">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48052">
        <property type="entry name" value="UNNAMED PRODUCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="13"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 22" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="19" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="17 23" id="KW-0472">Membrane</keyword>
    <keyword evidence="13 22" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-0675">Receptor</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="11 24" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 23" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="16 23" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="24">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753825" description="non-specific serine/threonine protein kinase" evidence="24">
        <location>
            <begin position="21"/>
            <end position="1043"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="23">
        <location>
            <begin position="720"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="25">
        <location>
            <begin position="770"/>
            <end position="1043"/>
        </location>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="799"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW05273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1043" mass="116278" checksum="7B2CC087930BC6D3" modified="2014-02-19" version="1">MVRFNLVMLCLSVLLCVVNALNTDGVTLLSLQKHWTFVPPSINLSWNASDSTPCSWLGVQCDNNYNAISLNLSEHSISGLLGPEIGHLSHLQTLDLASNNFSGKIPPELGNCSLLQNLDLSYNSITGNIPDSLRNLHNLVSFSVRYNMLTGQIPEFLFQLQHLEDLFLNRNSLTGSIPMNVGNGTQILMLYLDGNQLSGGIPPSIGNCSKLVELYLDYNQLHRVLPESLNNLHSVVRLSLSNNRLEGTIPLFGSSICKSLQYLDLRHIPSSLGQLRELSILRIENNHLSGQIPSEIGNCRSLQQLMLNNNEFEGEIPSEFGKLSQLQDLRLHVNHLTGGIPELHVYYNNLSGEEPSELAELKQLKNLTLYHNQFSGVIPQSLGINSSLEVLDISYNNFTGNIPPNICFGQQLVRLILSSNQFQGGIPPDIGRCTTLVRLRLDGKNFTGPLPHFTSNSSLTFVDLSKNNINGAIPSCLGNCTNLTNVILSHNNLFGIIPFELGNLVNLQTLNLSHKKLVGPLPPELSNCKKMQYFDAGFNSLNGSFPSSLRTWTGLTTLNLRDNHFTGGIPTFLSEYEGLSDLHLGGNYFGGQIPRSIGELHNLLYLLNLSANELTGEIPPEIGKLKSLQSLDISLNNLTGKIEVLEDLSSLTELNISYNSFSGSLPDTLVNLLHSSPLSFMGLPGLCIRCLPSNCSKSNSLKPCDERNSTHKKGLSKIKVVLIALGSTLLVTFLLLGLVYRLHYKQHVKIFPEQRSSTFLKKVMKVTQNLNDRHIIGRGAHGVIYKVEFDQDNVFVIKKFPFSDNNDQITSMTTEIKTTAMIRHRNLVRIKKFWLRKDCGLILYKYMENGSLHDVLHEKYPPPPLEWNVRYKIAVGIAHGLEYLHHDCHPFIVHRDIKPKNILLDSDMEPHIADFGIARLLDHSSSLQSFFVPGTVGYIAPENAYAAMISTKSDVYSYGVLLLELISRKKVLDDPLFVEGTDLVEWITFTWEKTKGIDGIVDSGLEEELLASNLKEEVEQMLLMALRCTKKHPSERPTMREVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKV5</accession>
    <name>V7AKV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">chlorophyll(ide) b reductase</fullName>
            <ecNumber evidence="13">1.1.1.294</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G185400g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>7(1)-hydroxychlorophyllide a + NAD(+) = chlorophyllide b + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24768"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83356"/>
            <dbReference type="ChEBI" id="CHEBI:83357"/>
            <dbReference type="EC" id="1.1.1.294"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>7(1)-hydroxychlorophyllide a + NADP(+) = chlorophyllide b + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24772"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:83356"/>
            <dbReference type="ChEBI" id="CHEBI:83357"/>
            <dbReference type="EC" id="1.1.1.294"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.294" evidence="13"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKV5"/>
    <dbReference type="SMR" id="V7AKV5"/>
    <dbReference type="STRING" id="3885.V7AKV5"/>
    <dbReference type="Gramene" id="ESW05508">
        <property type="protein sequence ID" value="ESW05508"/>
        <property type="gene ID" value="PHAVU_011G185400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNMEGLG"/>
    <dbReference type="OrthoDB" id="3592703at2759"/>
    <dbReference type="PhylomeDB" id="V7AKV5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034256">
        <property type="term" value="F:chlorophyll(ide) b reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015996">
        <property type="term" value="P:chlorophyll catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010304">
        <property type="term" value="P:PSII associated light-harvesting complex II catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05233">
        <property type="entry name" value="SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000223">
        <property type="entry name" value="Chlorophyll(Ide) b reductase NOL, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052625">
        <property type="entry name" value="Chl_b_Red"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24314:SF15">
        <property type="entry name" value="CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24314">
        <property type="entry name" value="NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0881">Chlorophyll catabolism</keyword>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00050138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00052465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00066856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW05508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="350" mass="38435" checksum="53603C2D490A7F5A" modified="2014-02-19" version="1">MAATTTLSFFHSPYPTLSSHSQFSLSSPSSLFKPYTVASRHNLRISTTAAAALTLSAFPNANSPTFLATASRNTQPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVEAAVHSLRVEFGEQYVWGTKCDVRNADDVKNLVSFAQEKLKYIDIWINNAGSNAYSYKPLVEASDEDLIEVVTTNTLGLMICCREAIKMMLDQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVLVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSTKPTYIRFLTGLKAYSQIFSRFAFGARRNRYILED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL44</accession>
    <name>V7AL44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RNA polymerase Rpb4/RPC9 core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G030200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the eukaryotic RPB4 RNA polymerase subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL44"/>
    <dbReference type="SMR" id="V7AL44"/>
    <dbReference type="STRING" id="3885.V7AL44"/>
    <dbReference type="Gramene" id="ESW06234">
        <property type="protein sequence ID" value="ESW06234"/>
        <property type="gene ID" value="PHAVU_010G030200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2351">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRKTQNE"/>
    <dbReference type="OrthoDB" id="2186918at2759"/>
    <dbReference type="PhylomeDB" id="V7AL44"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030880">
        <property type="term" value="C:RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.40:FF:000004">
        <property type="entry name" value="Dna-directed rna polymerase ii subunit 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006590">
        <property type="entry name" value="RNA_pol_Rpb4/RPC9_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045222">
        <property type="entry name" value="Rpb4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005574">
        <property type="entry name" value="Rpb4/RPC9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038324">
        <property type="entry name" value="Rpb4/RPC9_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21297">
        <property type="entry name" value="DNA-DIRECTED RNA POLYMERASE II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03874">
        <property type="entry name" value="RNA_pol_Rpb4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00657">
        <property type="entry name" value="RPOL4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="HRDC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA polymerase Rpb4/RPC9 core" evidence="4">
        <location>
            <begin position="16"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="138" mass="15921" checksum="CE179FEF4649F3A6" modified="2014-02-19" version="1">MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMS4</accession>
    <name>V7AMS4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G058700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMS4"/>
    <dbReference type="STRING" id="3885.V7AMS4"/>
    <dbReference type="Gramene" id="ESW06570">
        <property type="protein sequence ID" value="ESW06570"/>
        <property type="gene ID" value="PHAVU_010G058700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTMQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTHHTRG"/>
    <dbReference type="OrthoDB" id="1927217at2759"/>
    <dbReference type="PhylomeDB" id="V7AMS4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043622">
        <property type="term" value="P:cortical microtubule organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949">
        <property type="entry name" value="GASTRIC MUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949:SF2">
        <property type="entry name" value="OS05G0480600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="415"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="128"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="143"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="190"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="214"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="415"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="435"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="501" mass="54140" checksum="8741493CDA716510" modified="2014-02-19" version="1">MNNTRNVTHHHHTRGHSFNGFANIRPFSYTISSQGKPGKLSFESAKLATIGIDDLLSSTEGGKHDYDWLLTPPETPHLPSSEGLSQPTLVPPRSSLGRPMSYSHASTLSASQSENNNTHSHSRPARSGSVTRSPNRSSSIHNTRPSSPITRSPSAARSSTPTSRQTTTPTPPRALLPRSFPSSTTDTNKTRTSQVSRPSTPSSTPRPSIPANLHSPSATSRSPSRPSTPSRRHSLPSPLPSATRVARSSATPRPQLIVPPDFSLETPPNLRTTLPSDRPVSAGRSRPGAVATLPLKPNSEMQTPVVTVSRRQPSPIANRGRLSEYTSKTRVHGNAGDASELVARKSVKSSTTASDNNGLGRTISKKSLDMAIRHMDVRNGSGTLRSLSSATLYPQSVRTSTPKTHHTRGLSVASSMNINGSLQSRNNGNNTNRKNGREKGERQKQYLGKLNAVVDVYPYDSVLLKEDLNNTNWLHSVDGKCDEGAIFDNGFESLPEPFGFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMV6</accession>
    <name>V7AMV6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G080700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
            <location evidence="1">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMV6"/>
    <dbReference type="SMR" id="V7AMV6"/>
    <dbReference type="STRING" id="3885.V7AMV6"/>
    <dbReference type="Gramene" id="ESW06834">
        <property type="protein sequence ID" value="ESW06834"/>
        <property type="gene ID" value="PHAVU_010G080700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2SH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWHIDNV"/>
    <dbReference type="OrthoDB" id="1430376at2759"/>
    <dbReference type="PhylomeDB" id="V7AMV6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000006">
        <property type="entry name" value="Pectinesterase inhibitor 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051955">
        <property type="entry name" value="PME_Inhibitor"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080:SF12">
        <property type="entry name" value="PLANT INVERTASE_PECTIN METHYLESTERASE INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0052">Apoplast</keyword>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753906" description="Pectinesterase inhibitor domain-containing protein" evidence="7">
        <location>
            <begin position="22"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="8">
        <location>
            <begin position="36"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="219" mass="24715" checksum="13F274D76E983BA3" modified="2014-02-19" version="1">MAQLNLTLFVIFLSLLFSFLATPVEPSSLKRQRNPKTMTYIESSCNGTLYPNLCIRCLSQYAKSPLNGPQHLAQYALSVSLSRALHTKGYLLEVAKELQVIKSNKREYLTVQDCVNQITDSVEQISQAMKELRRFNQHGSSMSDKMLWHISNVETWVSTALTDASSCVYSFPGNRMSKRMASIKVKAMNVAQVTSNALFLFHRYASTYQKAATKITKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQT4</accession>
    <name>V7AQT4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">SH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G004000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQT4"/>
    <dbReference type="SMR" id="V7AQT4"/>
    <dbReference type="STRING" id="3885.V7AQT4"/>
    <dbReference type="Gramene" id="ESW07924">
        <property type="protein sequence ID" value="ESW07924"/>
        <property type="gene ID" value="PHAVU_009G004000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJ7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="19092at2759"/>
    <dbReference type="PhylomeDB" id="V7AQT4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.60">
        <property type="entry name" value="Arfaptin homology (AH) domain/BAR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.40">
        <property type="entry name" value="SH3 Domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027267">
        <property type="entry name" value="AH/BAR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050384">
        <property type="entry name" value="Endophilin_SH3RF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036028">
        <property type="entry name" value="SH3-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001452">
        <property type="entry name" value="SH3_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14167:SF81">
        <property type="entry name" value="ENDOPHILIN-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14167">
        <property type="entry name" value="SH3 DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14604">
        <property type="entry name" value="SH3_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00326">
        <property type="entry name" value="SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103657">
        <property type="entry name" value="BAR/IMD domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50044">
        <property type="entry name" value="SH3-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50002">
        <property type="entry name" value="SH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0728">SH3 domain</keyword>
    <feature type="domain" description="SH3" evidence="8">
        <location>
            <begin position="302"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="262"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="149"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="41180" checksum="7F3EFF4A4252DC28" modified="2014-02-19" version="1">MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEVELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGADNTCTSGSTLSRAALNYARARAQMEKERGSLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNTENAMKLEAAEAKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQRIIAMVEAERAYHQRVLQILDQLEGEMISERQRIEAPPTPSVDNSTPPPPSYEEVNGVYASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSVGDYIVVRKVTNNGWAEGECKGKAGWFPFGYIERRERVLASKVAEVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR79</accession>
    <name>V7AR79_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF632 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G021600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR79"/>
    <dbReference type="SMR" id="V7AR79"/>
    <dbReference type="STRING" id="3885.V7AR79"/>
    <dbReference type="Gramene" id="ESW08137">
        <property type="protein sequence ID" value="ESW08137"/>
        <property type="gene ID" value="PHAVU_009G021600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUPN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CDFLDYA"/>
    <dbReference type="OrthoDB" id="658187at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006868">
        <property type="entry name" value="DUF630"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006867">
        <property type="entry name" value="DUF632"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21450:SF19">
        <property type="entry name" value="F5M15.15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21450">
        <property type="entry name" value="PROTEIN ALTERED PHOSPHATE STARVATION RESPONSE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04783">
        <property type="entry name" value="DUF630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04782">
        <property type="entry name" value="DUF632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF630" evidence="3">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="DUF632" evidence="2">
        <location>
            <begin position="241"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="78"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW08137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="671" mass="76094" checksum="70105235091CA305" modified="2014-02-19" version="1">MGCNTSRLDRLPAVALCRDRCKFLDEALRQSYALADAHVAHMEALRKLGPALLCFFDGLDDSGETNVPNKTKVSVVKSEPQPRSPSSLSSDSDDTHGHVLLHSESEAEEAEKQEFQSFTHARYDYAPFSPPRSGGYFGSKPPSPPPPPSGSAWDFLNFFEPYEKYHVPYIPSGGDADAAEKEKGKVVKRDVYKLKAENGEAREKKKNGDSKEKKVVLEKEEVVLVSEQCSDSAKVKSGKGFSEAVKEIQVLFERASESGNPILELLDVGKLRYHRKFDLNPVSCKMMHVFTPSSPLGAKCMESQLLGRGMGSESEGVCRDKGLGYGNLSSTLKKLCLWERKLYHEVKAEEKLRMLHQKKCKQLRRMKQKDADSQKIDSVQTFIGILATKMKISIQVVDKISITISKLREEELWPQINRFILTFLGMWRDMQECYKCQYQQIVEAKTLDASSLNRKHGNDHIDATMKLKSEIQKWNLSFLDWIQAQKSHVKSLNGWLVRCLLYEPEEVPDDSTPFSPSKIGAPPVFVICNKWSRAVDNLSEKNVIEAVNGFMLRLNELLEKHILDLQQKLTLDKELEKKVKMLDREEQKMHKVVRAREKKMVPVGREDFDALLRGDAVHHADIVDTTDLQSGLKQIFGAMERFSDTTARLYEELCQQIKQDGHVLGESKKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARS0</accession>
    <name>V7ARS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DUF4005 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G118500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="6">Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the IQD family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARS0"/>
    <dbReference type="SMR" id="V7ARS0"/>
    <dbReference type="STRING" id="3885.V7ARS0"/>
    <dbReference type="Gramene" id="ESW07303">
        <property type="protein sequence ID" value="ESW07303"/>
        <property type="gene ID" value="PHAVU_010G118500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R300">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TDHRDSI"/>
    <dbReference type="OrthoDB" id="776767at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23767">
        <property type="entry name" value="IQCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.190:FF:000062">
        <property type="entry name" value="IQ-domain 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025064">
        <property type="entry name" value="DUF4005"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295">
        <property type="entry name" value="IQ-DOMAIN 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295:SF6">
        <property type="entry name" value="PROTEIN IQ-DOMAIN 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13178">
        <property type="entry name" value="DUF4005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="DUF4005" evidence="8">
        <location>
            <begin position="388"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="302"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="521"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="21"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="46"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="302"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="320"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="338"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="363"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="398"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="427"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="454"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="546" mass="61111" checksum="D157352CCCE78AA5" modified="2014-02-19" version="1">MGKKGSGSSWLTAVKRAFRSPTKDTDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVSSGHNTQQKLKHDVTATTEGSRTDQDQKHALAVAVATAEAAMATAQVAVEVARLTKPASHAREHYAAVVIQTAFRGYLAKRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSLHQSPATPSPAKSRPIQVRSASPRCIREDRNYPTSQTPSLRSNYHYTGNLYQNGRAVGSGTSSGGGGGGGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCCTESLGGGEVSPSSTGDLRRWLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASC6</accession>
    <name>V7ASC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GrpE protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G026300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Mitochondrion matrix</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the GrpE family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASC6"/>
    <dbReference type="SMR" id="V7ASC6"/>
    <dbReference type="STRING" id="3885.V7ASC6"/>
    <dbReference type="Gramene" id="ESW08190">
        <property type="protein sequence ID" value="ESW08190"/>
        <property type="gene ID" value="PHAVU_009G026300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3003">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTNAKED"/>
    <dbReference type="OrthoDB" id="201635at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:protein-folding chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.22.10:FF:000001">
        <property type="entry name" value="Protein GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="entry name" value="Head domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_CC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237:SF40">
        <property type="entry name" value="CELL CYCLE AND APOPTOSIS REGULATOR PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="GRPE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="Coiled-coil domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="Head domain of nucleotide exchange factor GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01071">
        <property type="entry name" value="GRPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="44"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="276"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="286"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="303" mass="34466" checksum="D0E962D9095AF3E9" modified="2014-02-19" version="1">MATFLSNQSLLASCPCSTPFSSKPFQTLKPKIISFPFRGFPRPLNSSLNRRTPLKYSQDSPPTRNDETGETRKDLRGIDGDEDKKPLPSLMVLLEAYKEAFFNGDENVVALIEEKIYSELNRKNKLIQKVSSLSADKATSKDRYFRLQADFDNFRKRFDKERLSIQSDAQQELIEKLLLMVDSFEKTKQHIKAATEKEKKIDVSYQGIYKQFVEILRSHHVSVVATVGKPFNPLQHEAIAREESTEFKKGIIIKESRRGFLLRDRVLRPALVKVSLGPGTKKSPLSPDNSMEQPSTAAGIDER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU95</accession>
    <name>V7AU95_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF1677 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G110700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU95"/>
    <dbReference type="STRING" id="3885.V7AU95"/>
    <dbReference type="Gramene" id="ESW09227">
        <property type="protein sequence ID" value="ESW09227"/>
        <property type="gene ID" value="PHAVU_009G110700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW09228">
        <property type="protein sequence ID" value="ESW09228"/>
        <property type="gene ID" value="PHAVU_009G110700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1CX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CQKFNST"/>
    <dbReference type="OrthoDB" id="678173at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012876">
        <property type="entry name" value="DUF1677_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108">
        <property type="entry name" value="OS01G0745000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108:SF14">
        <property type="entry name" value="OS01G0745000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07911">
        <property type="entry name" value="DUF1677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="143" mass="16515" checksum="E5C531184093541C" modified="2014-02-19" version="1">MEQNQQKLRKAVSDVSREIDRYYNELKLERQLGGIEEVEQAECKCCGLKEECTEVYIREVEECFCGNWVCGLCSEAVKERVGRSPTVAMQDALNSHRDFCQEYNATRLNPQLSLTHSMREIAKRSLENRNSKGLKLSRTTSYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUP1</accession>
    <name>V7AUP1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Ubiquitin-fold modifier 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G121900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the UFM1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUP1"/>
    <dbReference type="SMR" id="V7AUP1"/>
    <dbReference type="STRING" id="3885.V7AUP1"/>
    <dbReference type="Gramene" id="ESW09367">
        <property type="protein sequence ID" value="ESW09367"/>
        <property type="gene ID" value="PHAVU_009G121900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3483">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEHAVGK"/>
    <dbReference type="OrthoDB" id="284357at2759"/>
    <dbReference type="PhylomeDB" id="V7AUP1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990592">
        <property type="term" value="P:protein K69-linked ufmylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01766">
        <property type="entry name" value="Ubl_UFM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000044">
        <property type="entry name" value="Ubiquitin-fold modifier 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005375">
        <property type="entry name" value="UFM1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15825">
        <property type="entry name" value="UBIQUITIN-FOLD MODIFIER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15825:SF0">
        <property type="entry name" value="UBIQUITIN-FOLD MODIFIER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03671">
        <property type="entry name" value="Ufm1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038027">
        <property type="entry name" value="Ubiquitin-like_Ufm1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0833">Ubl conjugation pathway</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00055867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR038027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="87" mass="9196" checksum="276279B0B19E1747" modified="2014-02-19" version="1">MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVM5</accession>
    <name>V7AVM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">U-box domain-containing protein</fullName>
            <ecNumber evidence="7">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G148200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="7"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVM5"/>
    <dbReference type="SMR" id="V7AVM5"/>
    <dbReference type="Gramene" id="ESW09692">
        <property type="protein sequence ID" value="ESW09692"/>
        <property type="gene ID" value="PHAVU_009G148200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTKN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FRVHTEL"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000502">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF20">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="8">
        <location>
            <begin position="11"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="412" mass="45017" checksum="C01BBE808A1A629A" modified="2014-02-19" version="1">MVRARDDLCINVPTFFKCPISLDVMKSPVSLCTGVTYDRSSIQRWLDAGNNTCPATMQLLQTKDFVPNRTLQSLIQIWSDSLRHSTVPHPLLSPDQVLPTVAQLETHSLCSASLTKLLHFARDSHHNKLFLAKLEGFVNQLLRFLDNVDGGLVASANTQFLQQVVILLGLILDSVEDRDGLRNSLLKGNKQSLDSLLLVLQRGCCESRIASARVLQFIAADAESKILIAEKEGVVAELLKSAAPEKDPALVEAALASLVAISTPKRNKLKLVSLGAVKALSRLLAEAKLGAAAVEKVLKLVETASSTREGRKEICEDAACVAAVLSKVLKVSSVATEHAVTTLWSVCYLFRDRKAQEAVTQANGLTKILLLMQSNCAPQVRQMCTDLLKIFRVNSKSCLSCYDTKTTHIMPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWC2</accession>
    <name>V7AWC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G085400g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWC2"/>
    <dbReference type="SMR" id="V7AWC2"/>
    <dbReference type="Gramene" id="ESW08918">
        <property type="protein sequence ID" value="ESW08918"/>
        <property type="gene ID" value="PHAVU_009G085400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDEAVGM"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="PhylomeDB" id="V7AWC2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000011">
        <property type="entry name" value="probable protein phosphatase 2C 59"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000222">
        <property type="entry name" value="PP2C_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01032">
        <property type="entry name" value="PPM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 12" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="14">
        <location>
            <begin position="34"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="12"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW08918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="32406" checksum="366CA24DDE8A5D1C" modified="2014-02-19" version="1">MSFPNSVLPAPNQVQNSQNAIVSGGGTSQNGKFSYGYASSPGKRSSMEDFYDTRIDGVNGQIVGLFGVFDGHGGARAAEYVKKNLFSNLINHPKFISDTKSAISDAYNHTDSEFLKSENSNNKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDNSLEFLILASDGLWDVVSNEEAVAMIKSMEDAEEAAKRLMQEAYKRGSADNITCVVVRFLTNQGISSHSSSSGGANKAIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWQ4</accession>
    <name>V7AWQ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G061400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWQ4"/>
    <dbReference type="SMR" id="V7AWQ4"/>
    <dbReference type="STRING" id="3885.V7AWQ4"/>
    <dbReference type="Gramene" id="ESW08636">
        <property type="protein sequence ID" value="ESW08636"/>
        <property type="gene ID" value="PHAVU_009G061400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCAMIGF"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd20654">
        <property type="entry name" value="CYP82"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000026">
        <property type="entry name" value="Cytochrome P450 82C4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050651">
        <property type="entry name" value="Plant_Cytochrome_P450_Monoox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947:SF26">
        <property type="entry name" value="CYTOCHROME P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47947">
        <property type="entry name" value="CYTOCHROME P450 82C3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 12 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 13" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="12">
        <location>
            <position position="414"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW08636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="477" mass="54527" checksum="20FCD67734F03AEE" modified="2014-02-19" version="1">MNSVGRPRCLPVQKPYHITMGNMADKYGPVFTLRLGVHKNLIVSNWEMAKQCFTVNDKAFANRPNMLALEVLGYNFSMVGFSPYGSYWRHMRKILTQKLLSTHRVDMFKHVMESEVKVGIKESYDIWQKKENNGSEKATTEMKRWLGDITFNIVFRAIVGKRFVGDNDSENERILKILRDYINLAGAFTVSDALPYLRWLDLDGAERNMKKTIKELDGFLQVWLEQHKLNRNGDLANQDFMDVLLGLVEEGEEFDGHDADTTIKATCLALILAATDTSTATMTWAVALLVNNPEILKKAIEELDREVGKEKMVDISDLKKLKYIHCIIMETLRLYPAAPLSLIHESMEDCIVGGYHVPTGTRLLTNISKLQRDPFMYPHPLEFRPERFLTTHKDVDIKGRHFQLIPFGAGRRMCPGLYFGFQLIHLTLATLLHGFHFATPDGKPVDMLEQVSLTNIMASPLQLILTPRLSSHIYHQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXE2</accession>
    <name>V7AXE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AIPP2-like SPOC-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G1919001g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXE2"/>
    <dbReference type="STRING" id="3885.V7AXE2"/>
    <dbReference type="Gramene" id="ESW10234">
        <property type="protein sequence ID" value="ESW10234"/>
        <property type="gene ID" value="PHAVU_009G1919001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="651601at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140566">
        <property type="term" value="F:histone reader activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034244">
        <property type="term" value="P:negative regulation of transcription elongation by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056280">
        <property type="entry name" value="AIPP2-like_SPOC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049914">
        <property type="entry name" value="PHD1-3/5-6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33304">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33304:SF36">
        <property type="entry name" value="GB|AAF26970.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23121">
        <property type="entry name" value="SPOC_AIPP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="AIPP2-like SPOC-like" evidence="6">
        <location>
            <begin position="179"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF23121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW10234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="364" mass="41264" checksum="A2D58A7709749D23" modified="2014-02-19" version="1">MQRDSTCVMISNWPFSFFYCIQINTTIIPEDWLCETCQSKHDSTSQRKVNQVVGSWASKRKPSVRGGKVKYLDLDEVIRLSSGKASAVSKNVIPKIPSLSPKANLPILPPKVLGKLPRNDEVRKKPMTNQHASCSLFKGGEHSDDAECNRSNMEKNDPQSIQKNLNLYRKFLPSSIHAWRGQIQILQTASSWILYDGFEAQPPCIVNKKAYKFSREMPSVLHLEAFPALNVLTNIFPDESPKLQDIALYFFPSECTDRFRKDLNDILKFMNDEKAMLRSFIDGVELLVFTSNQLDIDSRGVIAEVKGGHFLWGVFRQFKIDKAIQRVPAMEPVDMEIDMIGGKDVEGKVDHFQKHKPKSASDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXQ9</accession>
    <name>V7AXQ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CASP-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G179200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3 8">Homodimer and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Cell membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the Casparian strip membrane proteins (CASP) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXQ9"/>
    <dbReference type="STRING" id="3885.V7AXQ9"/>
    <dbReference type="Gramene" id="ESW10080">
        <property type="protein sequence ID" value="ESW10080"/>
        <property type="gene ID" value="PHAVU_009G179200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW75">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ADHSMAI"/>
    <dbReference type="OrthoDB" id="672180at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006702">
        <property type="entry name" value="CASP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573:SF50">
        <property type="entry name" value="CASP-LIKE PROTEIN 4A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33573">
        <property type="entry name" value="CASP-LIKE PROTEIN 4A4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04535">
        <property type="entry name" value="CASP_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Casparian strip membrane protein" evidence="10">
        <location>
            <begin position="123"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="65"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW10080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="30210" checksum="23814D3142276000" modified="2014-02-19" version="1">MKKSLSKGSESSNQLDSPVQFHSPMRWDGTGPPVFSEYPSPENSTVKQADHSMAIVTVGKLKQLVPDKRTEHRKPPENPPPPARVFNGTMTEETQHPAAKAAPVSVGGERRSSSSRWTTEETVCKAALGFRLSEMVVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIGFAYSALQACDLACQLATGKHLINHHLRNHFDFFMDQVLAYLLISASSSAATRVDDWISNWGKDEFTEMATASIGMSFLAFVAFAVSSLISGYTLCNRSSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AY54</accession>
    <name>V7AY54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcription initiation factor TFIID subunit 10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G222000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TAF10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AY54"/>
    <dbReference type="SMR" id="V7AY54"/>
    <dbReference type="STRING" id="3885.V7AY54"/>
    <dbReference type="Gramene" id="ESW10587">
        <property type="protein sequence ID" value="ESW10587"/>
        <property type="gene ID" value="PHAVU_009G222000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3423">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQCRSIV"/>
    <dbReference type="OrthoDB" id="154356at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000124">
        <property type="term" value="C:SAGA complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005669">
        <property type="term" value="C:transcription factor TFIID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990841">
        <property type="term" value="F:promoter-specific chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016251">
        <property type="term" value="F:RNA polymerase II general transcription initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006367">
        <property type="term" value="P:transcription initiation at RNA polymerase II promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003923">
        <property type="entry name" value="TAF10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21242">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21242:SF0">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03540">
        <property type="entry name" value="TAF10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="74" mass="8329" checksum="DFDCE1291DAC1741" modified="2014-02-19" version="1">MNQNPQSSEGRGDDDATLSDFLASLMDYTPTIPDELVKHYLAKNGFQCRSIVVAEDALHYTYHQCLVALQHCKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZC6</accession>
    <name>V7AZC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TF-B3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G170300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZC6"/>
    <dbReference type="Gramene" id="ESW09968">
        <property type="protein sequence ID" value="ESW09968"/>
        <property type="gene ID" value="PHAVU_009G170300g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="682109at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="11364" checksum="7C5F7D928C403E8E" modified="2014-02-19" version="1">MAVIPEEIVKLSGKGLFTTVNIRAENGHVDRAFAIEFENELEEEWTLSDSQGNIHIVYYNKDILCPQIVYGWSRLSDFYGFKGDHNILFRGQAFPRLPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZS3</accession>
    <name>V7AZS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Vta1/callose synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G1503000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZS3"/>
    <dbReference type="STRING" id="3885.V7AZS3"/>
    <dbReference type="Gramene" id="ESW09716">
        <property type="protein sequence ID" value="ESW09716"/>
        <property type="gene ID" value="PHAVU_009G1503000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0916">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HQSEACE"/>
    <dbReference type="OrthoDB" id="1880850at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005771">
        <property type="term" value="C:multivesicular body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032511">
        <property type="term" value="P:late endosome to vacuole transport via multivesicular body sorting pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.270">
        <property type="entry name" value="Vacuolar protein sorting-associated protein vta1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044538">
        <property type="entry name" value="Vta1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039431">
        <property type="entry name" value="Vta1/CALS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023175">
        <property type="entry name" value="Vta1/CALS_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46009">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46009:SF1">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04652">
        <property type="entry name" value="Vta1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Vta1/callose synthase N-terminal" evidence="3">
        <location>
            <begin position="39"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04652"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="94" mass="10536" checksum="17E8ADC0BA39E302" modified="2014-02-19" version="1" fragment="single">MPGLDAAPNTLTRRPSRSAATTFSAEVFDNEVVPSALASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1U3</accession>
    <name>V7B1U3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ripening-related protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G066000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the kiwellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1U3"/>
    <dbReference type="SMR" id="V7B1U3"/>
    <dbReference type="STRING" id="3885.V7B1U3"/>
    <dbReference type="Gramene" id="ESW11872">
        <property type="protein sequence ID" value="ESW11872"/>
        <property type="gene ID" value="PHAVU_008G066000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ0R">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GVPPNEW"/>
    <dbReference type="OrthoDB" id="406505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd22270">
        <property type="entry name" value="DPBB_kiwellin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="entry name" value="RlpA-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039271">
        <property type="entry name" value="Kiwellin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33191:SF82">
        <property type="entry name" value="PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33191">
        <property type="entry name" value="RIPENING-RELATED PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24300">
        <property type="entry name" value="KWL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="Barwin-like endoglucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753991" description="Ripening-related protein 1" evidence="5">
        <location>
            <begin position="27"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW11872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="188" mass="20370" checksum="F6466D55B7E91EDA" modified="2014-02-19" version="1">MKRFCSNASFILLATLILTSCFESEAQKCRPSGRIRGKKAPPGQCNQENDSDCCKEGKLYTAYECSPPLSTHTNAYLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHKSRCLHNITISGNGRSVVAMVVDECDSTKGCDADHDYQPPCPNNTVDASRAVWKALGVPPNEWGGLDITWSDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2F2</accession>
    <name>V7B2F2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dirigent protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G083300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Secreted</location>
            <location evidence="4">Extracellular space</location>
            <location evidence="4">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the plant dirigent protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2F2"/>
    <dbReference type="SMR" id="V7B2F2"/>
    <dbReference type="STRING" id="3885.V7B2F2"/>
    <dbReference type="Gramene" id="ESW12082">
        <property type="protein sequence ID" value="ESW12082"/>
        <property type="gene ID" value="PHAVU_008G083300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYKV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKITFLM"/>
    <dbReference type="OrthoDB" id="1685727at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009699">
        <property type="term" value="P:phenylpropanoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.480.10">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044859">
        <property type="entry name" value="Allene_oxi_cyc_Dirigent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004265">
        <property type="entry name" value="Dirigent"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46215:SF17">
        <property type="entry name" value="DIRIGENT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46215">
        <property type="entry name" value="DIRIGENT PROTEIN 24-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03018">
        <property type="entry name" value="Dirigent"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0964">Secreted</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008194053" description="Dirigent protein" evidence="4">
        <location>
            <begin position="24"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW12082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="222" mass="24293" checksum="85F405DDC54B3011" modified="2014-02-19" version="1">MATPIPSIVVIFMLLFFMTKCSSARTLDNIPSSYHNHGHQKITFLMSDVLNSSSTQYFGKPTTTNVTGQIPQFTPTVPLNSSSQTFDLSTIGFSFPTRATLQELEYGSVTPIDEELVQNDGDEVHKLGKAQGVYVVSSEDRSSHMVAITTSFLKGGYQDGLRLFGVHKSDVFESHIAVIGGTGKYYNANGYAAVKVVYKVGSSSKEKKVTSSKFLLFDVYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B313</accession>
    <name>V7B313_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MOSC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G243300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B313"/>
    <dbReference type="SMR" id="V7B313"/>
    <dbReference type="STRING" id="3885.V7B313"/>
    <dbReference type="Gramene" id="ESW10851">
        <property type="protein sequence ID" value="ESW10851"/>
        <property type="gene ID" value="PHAVU_009G243300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2362">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARQYPQM"/>
    <dbReference type="OrthoDB" id="17255at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032787">
        <property type="term" value="P:monocarboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005303">
        <property type="entry name" value="MOCOS_middle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14237:SF19">
        <property type="entry name" value="MITOCHONDRIAL AMIDOXIME REDUCING COMPONENT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14237">
        <property type="entry name" value="MOLYBDOPTERIN COFACTOR SULFURASE MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03473">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03476">
        <property type="entry name" value="MOSC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141673">
        <property type="entry name" value="MOSC N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="136"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="310" mass="34804" checksum="8C1724124FB38067" modified="2014-02-19" version="1">MESAIPAPKVSRLFIYPIKSCRGISVSHAPLTPTGLRWDRQWVVVNSQGRACTQRVDPKLALVEVQLPPEALVEHYQPTNNSYMVLKAPGMESLKICLSKQHEVTEAITVWEWTGSAWDEGIEASRWFSDFLGKPCQLVRFNAASEVRQVDPDYVGGQHRTYFSDGYPFLLLSQESLDALNELLKEPIPINRFRPNILVEGCDPYSEDLWTEIKISGFSFQGVKLCSRCKVPTINQETGIAGSEPTETLMKTRSGKVIRPDAKNKNKVYFGQNMVWNWMDSSAEENAKMIQVGDSVYVLRKVSSAVEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B396</accession>
    <name>V7B396_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Proline dehydrogenase</fullName>
            <ecNumber evidence="2 5">1.5.5.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G022000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Converts proline to delta-1-pyrroline-5-carboxylate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>L-proline + a quinone = (S)-1-pyrroline-5-carboxylate + a quinol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23784"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17388"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.5.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the proline oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.2" evidence="2 5"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B396"/>
    <dbReference type="SMR" id="V7B396"/>
    <dbReference type="STRING" id="3885.V7B396"/>
    <dbReference type="Gramene" id="ESW11343">
        <property type="protein sequence ID" value="ESW11343"/>
        <property type="gene ID" value="PHAVU_008G022000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0186">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WMQDAAD"/>
    <dbReference type="OrthoDB" id="5464at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004657">
        <property type="term" value="F:proline dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010133">
        <property type="term" value="P:L-proline catabolic process to L-glutamate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002872">
        <property type="entry name" value="Proline_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015659">
        <property type="entry name" value="Proline_oxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13914:SF33">
        <property type="entry name" value="PROLINE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13914">
        <property type="entry name" value="PROLINE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01619">
        <property type="entry name" value="Pro_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="FAD-linked oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 5" id="KW-0642">Proline metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proline dehydrogenase" evidence="7">
        <location>
            <begin position="133"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="22"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="22"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW11343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="54147" checksum="F4580FD629624673" modified="2014-02-19" version="1">MATRVIPPRILRNLRYNTATKPLKSVQPPLSPSLSPSPCLPPPTSTVLRPAATPDLNFHDVEKLFSHVRTTALLRSAAVLHATAVEPLVDFGSWLLRSNLVNVPGLRELIFATVRATFYDHFCAGEDAPTAASKIQELNHAGLRGMLVYGVEDALDNDACDRNFRGFLRTIDVSRSLPPSSVSFVIVKITAICPMSLLERMSDLLRWQHKDPSFSLPWKQDCFPIFSESSPLYHTRTRPEPLTPEEERDLELAMQRFLELCQKCAQSNIPLLVDAEHTSVQPAIDYFTYSSAIVNNKDDNAIVYGTIQTYLKDAKERLLLTVTAAEKMGIPMGFKLVRGAYMSSETKLAESLGYQSPIHDTIDDTHECFNACSSYMLEKVANGPGGVVLATHNVESGKLAAAKAHELGIGKVNHKVEFAQLHGMSEALSFGLSNAGFQVSKYMPFGPVETVMPYLLRRAEENRGLLAASGFDRQLMRKELGRRLKSAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3D8</accession>
    <name>V7B3D8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3'-5' exonuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G109700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3D8"/>
    <dbReference type="SMR" id="V7B3D8"/>
    <dbReference type="STRING" id="3885.V7B3D8"/>
    <dbReference type="Gramene" id="ESW12407">
        <property type="protein sequence ID" value="ESW12407"/>
        <property type="gene ID" value="PHAVU_008G109700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4373">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YISFEVG"/>
    <dbReference type="OrthoDB" id="1920326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06141">
        <property type="entry name" value="WRN_exo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.10:FF:000054">
        <property type="entry name" value="Werner Syndrome-like exonuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051132">
        <property type="entry name" value="3-5_Exonuclease_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13620">
        <property type="entry name" value="3-5 EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13620:SF105">
        <property type="entry name" value="OS01G0737700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="3">
        <location>
            <begin position="50"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="231" mass="26464" checksum="1834AC9CBB1CCB69" modified="2014-02-19" version="1">MIELVDGNGVPIWMRNRSNPVATVNVVDHNLRNNTYNLYDVTFETHNIHTLVTSHPSEVATWLSRNTGRRHGLMVGLDVEWRPNTRTNTQNPVATLQLCVGHACLVFQIIHSPYIPRSLASFLEDSNVTFFGVGIQADADKLLRDYDLHVANVCDLRPLAADQLWRHPHLRQAGLKTLCLYVLDVEIQKPQSVTRSSWDNRWLTTQQVQYAAIDAFLSYEIGRRLREPVIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7B499</accession>
    <name>V7B499_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G109500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B499"/>
    <dbReference type="Gramene" id="ESW12405">
        <property type="protein sequence ID" value="ESW12405"/>
        <property type="gene ID" value="PHAVU_008G109500g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="8204" checksum="00597394F49A5BCF" modified="2014-02-19" version="1">MQLEFNMWNSIQQHYINYSDFSVFKYLKKLFLLDGNIVGCVGGEGFKWPTNLQEAEFKQSEQHYSFISE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B545</accession>
    <name>V7B545_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Iron-sulfur cluster biosynthesis family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G154100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B545"/>
    <dbReference type="STRING" id="3885.V7B545"/>
    <dbReference type="Gramene" id="ESW12934">
        <property type="protein sequence ID" value="ESW12934"/>
        <property type="gene ID" value="PHAVU_008G154100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1119">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIDLFWY"/>
    <dbReference type="OrthoDB" id="4518at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009941">
        <property type="term" value="C:chloroplast envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044200">
        <property type="entry name" value="At5g03900-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47380">
        <property type="entry name" value="OS02G0533000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47380:SF4">
        <property type="entry name" value="OS02G0533000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="373"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="416" mass="46345" checksum="4260289331577305" modified="2014-02-19" version="1">MASISKCITVIPTCGLSRLQSFTLSSLAKPPKQAIAFPCVQNPLIGGVRRRGLDSRVLVARPGGTVETDKVPSDVRKRTMDAVDGCGGRVTIGDVASRAGLNLNQAQKALQALAADTDGFLEVSEEGDVLYVFPKDYRSRLGAKSLRIKAEPYFEKAKAAVEYLIRVSFGTALIASIVIVYTTIIALVTSSRSDDDNRGRRGGRSYDSGVTFFFNPVDLFWYWDPYYYRRRRLQADDDKMNFIESVFSFVFGDGDPNQGIEEERWKLIGQYIASNGGVVAAEELAPYLDIDSMEGLKDDESYILPVLLRFDGQPDVDEKGNILYRFPSLQRTASQKSKRKEYVGRRWADWVGIEKFFQEKKWQFSKTGTSERAMVFGLGGLNLFGVIILGTMLKDMAVAPSSFIKFVGDIFPLLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5N0</accession>
    <name>V7B5N0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G088400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5N0"/>
    <dbReference type="STRING" id="3885.V7B5N0"/>
    <dbReference type="Gramene" id="ESW12148">
        <property type="protein sequence ID" value="ESW12148"/>
        <property type="gene ID" value="PHAVU_008G088400g"/>
    </dbReference>
    <dbReference type="OMA" id="YIGESPN"/>
    <dbReference type="OrthoDB" id="1416252at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.200">
        <property type="entry name" value="LURP1-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007612">
        <property type="entry name" value="LOR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038595">
        <property type="entry name" value="LOR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025659">
        <property type="entry name" value="Tubby-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087:SF58">
        <property type="entry name" value="OS07G0230700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04525">
        <property type="entry name" value="LOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54518">
        <property type="entry name" value="Tubby C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="144" mass="16227" checksum="08BECC50F7F27263" modified="2014-02-19" version="1">MAKQVSVINSSYCAPHSVTLQINTEEGATYNEKDDRLFYTDDTFFTLHNRRVLYDDAENPIVTLYSKTVSLHGRCNVFKGESTDSSELLFSVKKIKKSPGITKLNVFLANNQDKKKSDFRMIIFGSKRSCTVYAGESPNIVAKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6I5</accession>
    <name>V7B6I5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PGG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G203800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6I5"/>
    <dbReference type="STRING" id="3885.V7B6I5"/>
    <dbReference type="Gramene" id="ESW13522">
        <property type="protein sequence ID" value="ESW13522"/>
        <property type="gene ID" value="PHAVU_008G203800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0504">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1925304at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026961">
        <property type="entry name" value="PGG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24177:SF446">
        <property type="entry name" value="ANKYRIN REPEAT-CONTAINING PROTEIN NPR4-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24177">
        <property type="entry name" value="CASKIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13962">
        <property type="entry name" value="PGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="415"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="441"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="485"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="2">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="PGG" evidence="4">
        <location>
            <begin position="412"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW13522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="549" mass="61584" checksum="FC335EDEBC8B9B61" modified="2014-02-19" version="1">MQEQLVERGVSCTTATIIFLHQHTSIFFQGSPLKMMNPDVEVSDESNIKITISRDYLSHDQTLPPVAVTPSSEMLWCAFSGDWSKMEDIVKNDPSSVRIQFIGSGNTALHIAAGAGNTSFVEELTKLMKPEDQLIPNFQGMLPVHLAALSGHGRIVKDLCSQQRLLDKMAYKDIRKLFFITISNNMFDVAITIFKKCPLELSTARDEEQLTAMHMLARKPSTVLRMELEDDKDDKGSGIILLRGIWAEVGKLKIEETFALITQPSVVLFDAIQSVSHKEVINMFLKCIEILSTVKDPNGRNLLHLLFLHRRDDIFNTLVNHRKEQLVRAVDNEGNNVLHLAALFPIQFQSFSGSSAYIQMQRELKWFKKAQESVPSELKSVINKKGKRPIDVFYDEHNQLSKDIKEAAKGIADSGMIVATLVATVAFAAALTVPGDKNNNWFIVFIFTNAVALFTSSASILSFLSNFTSSRFAQSEFVVSLHPSLTFGPVLLIISVASMVLAFIAATFLIFAHTTNTTHRVEGEWREGKKHYKDTDENLCTVNYQKMYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7W7</accession>
    <name>V7B7W7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Isopenicillin N synthase-like Fe(2+) 2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G2139000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7W7"/>
    <dbReference type="STRING" id="3885.V7B7W7"/>
    <dbReference type="Gramene" id="ESW13645">
        <property type="protein sequence ID" value="ESW13645"/>
        <property type="gene ID" value="PHAVU_008G2139000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isopenicillin N synthase-like Fe(2+) 2OG dioxygenase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="83" mass="9491" checksum="CADFC926409AF836" modified="2014-02-19" version="1" fragment="single">VISNGKYKSVEHRVNARSDGTRMSVASFYNPGSDALIYPAPPLLERDPLYPTFVFEDYMKLYATVKFQPKEPRFQAIKALNSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9E7</accession>
    <name>V7B9E7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G259000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9E7"/>
    <dbReference type="SMR" id="V7B9E7"/>
    <dbReference type="STRING" id="3885.V7B9E7"/>
    <dbReference type="Gramene" id="ESW14175">
        <property type="protein sequence ID" value="ESW14175"/>
        <property type="gene ID" value="PHAVU_008G259000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4361">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECLHMAG"/>
    <dbReference type="OrthoDB" id="417450at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:protein-folding chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050821">
        <property type="term" value="P:protein stabilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.120">
        <property type="entry name" value="BAG domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039773">
        <property type="entry name" value="BAG_chaperone_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036533">
        <property type="entry name" value="BAG_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003103">
        <property type="entry name" value="BAG_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12329:SF16">
        <property type="entry name" value="BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12329">
        <property type="entry name" value="BCL2-ASSOCIATED ATHANOGENE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02179">
        <property type="entry name" value="BAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00264">
        <property type="entry name" value="BAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63491">
        <property type="entry name" value="BAG domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51035">
        <property type="entry name" value="BAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="41"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="BAG" evidence="3">
        <location>
            <begin position="133"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW14175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="247" mass="27562" checksum="BC07E7C26799F6C1" modified="2014-02-19" version="1">MKTSASKGAPNDGVKGSIDWELRPGGMLVQKRQPLESSSSTMIKIKVSHGSYHHHFTVPAQSTFGHLKGVLTRETGLEAKEQRLLFRGKEKEDEEWLHMVGVKDMSKVILLEDPASKERKLEEMQKREDILKACEAISGVRTQVDKLHKKVVALETTMVEDKEFSILTELLMVQLLKLDSIAADGEAKVQRRAEVLRVQSYLETVEMLKAKNCGAFSNGGNINAVAFESGVGSLKSTVITQNWEHFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9E9</accession>
    <name>V7B9E9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA/RNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G201200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9E9"/>
    <dbReference type="SMR" id="V7B9E9"/>
    <dbReference type="STRING" id="3885.V7B9E9"/>
    <dbReference type="Gramene" id="ESW13493">
        <property type="protein sequence ID" value="ESW13493"/>
        <property type="gene ID" value="PHAVU_008G201200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2162">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VETCPRK"/>
    <dbReference type="OrthoDB" id="69928at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005697">
        <property type="term" value="C:telomerase holoenzyme complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070034">
        <property type="term" value="F:telomerase RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042162">
        <property type="term" value="F:telomeric DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000184">
        <property type="term" value="P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000225">
        <property type="entry name" value="Protein SMG7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018834">
        <property type="entry name" value="DNA/RNA-bd_Est1-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019458">
        <property type="entry name" value="Est1-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045153">
        <property type="entry name" value="Est1/Ebs1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15696:SF35">
        <property type="entry name" value="NONSENSE-MEDIATED MRNA DECAY FACTOR SMG7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15696">
        <property type="entry name" value="SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10374">
        <property type="entry name" value="EST1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10373">
        <property type="entry name" value="EST1_DNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Telomerase activating protein Est1-like N-terminal" evidence="4">
        <location>
            <begin position="65"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="DNA/RNA-binding" evidence="3">
        <location>
            <begin position="200"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="644"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="790"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="655"/>
            <end position="664"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW13493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="943" mass="104962" checksum="0694B46B66A20DA0" modified="2014-02-19" version="1">MDKAFAPSSWERAHRLYEKNLELENKQRRSAQAQVPSDPNAWQQIRENYEAIILEDHAFSEKHNIEYALWQLHYKRIEELRAYFNAAHTSVSSKSSMGGKGPVRPDRITKIRLQFKTFLSEATGFYHDLIMNIRAKYGLPLGYFEDAENKIIVGKDGKKSSEMKKGLISCHRCLIYLGDLARYKGLYGGGDSKKREYAAASSYYLQAATTWPSSGNPYHQLALLASYNEDELTTVYCYFRSLAVDSPFSTARDNLILAFEKNRQSYSKLSGGDLKAHAVNGMGKGEAKLVTRDTGVETCPRKEGASNIQDTYKSFCTRLVRLNGILFTRTSLETFAEVLSLVCAGLHELLSSGQDEELNFGIDTLENKLAIVRIVSMIIFTVYNVKKDSEGQTYAEILQRAALLKNAFTAAFELMSLVVEKCMLLRDPSCSYLLPGILVFVEWLACYPDIAAGKDEDNQAPIRSKFWNHCLSFLNRLLSLLPMSEDEEETCFNNMSRYEEGETENRLALWEDFELRGFVPLLPAQTILDFSRKNSLGSDSEKERKARVKRILAAGKALANVVTVDQQMIYFDSKGKKFVVGVKPQISDDFVISSFSSTPGADYHQYIEGEDDDEVIVFKPLVAEKGADMVVASSWAPPEGLESVPTASVGDMKFNENSTSKPLNDANHQISLPASVNAMVPQHPPVQPHSLRWLEEEISLANSLKGLRFMENGHMMKPGLPFKEAVAISDPPARAVPTQQSVSTGTSIFYGHDLSKADDFANSFKVDANASTGTFTDNSVVKMSSTLQAGVKKSPVSRPSRHLGPPPGFSHVPLKQGIEPTGSDSISGNSIMDDYSWLDGYQLPVSTKGLGPNGPLTWSQSNSHQVGNNGLSGPVSFSYTGKQIPSLQVEKQNGWQDQQTFELLKTHQNQQLQPQVLTNGNHHFTPLPEQFQGQSIWTGQYFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9Z6</accession>
    <name>V7B9Z6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G184000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9Z6"/>
    <dbReference type="SMR" id="V7B9Z6"/>
    <dbReference type="Gramene" id="ESW13291">
        <property type="protein sequence ID" value="ESW13291"/>
        <property type="gene ID" value="PHAVU_008G184000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEFCKIG"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000294">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At1g09900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050872">
        <property type="entry name" value="PPR_P_subfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128">
        <property type="entry name" value="MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128:SF211">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="13"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="112"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="147"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="214"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="249"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="284"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="319"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="354"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="389"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="424"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="459"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="494"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="529"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="564"/>
            <end position="598"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="622" mass="69132" checksum="C365CF1ACAFEEAC8" modified="2014-02-19" version="1">MACKSELFVLLGDIRAIDIRKPNGTCSRKHLGNCLFAVSKYENCGLKGNLQHFERFRKGALNGMESSPDGVNSSLSFEDSENDHLRMLVKNGELEEGSKFLEYMTNKGSMPDVIACTTLIHEFCKIGRTKKATQIMGILDESGAVIDVTTYNFLIGGYCKSGEIKEALRVLDRMSVAPNADTYDTIFHSLCDRMKLKQAMEVPDIELQSKCYPDVVTYTELIDATCKENGVGQSMKLLIEMMSKGCKPNVVTYNVLIKGICNEGRLDEAIRFLNKLRSYGCNPDVISHTIILHSLCSGGRWMDAMKLLASMLRKGCSPSVVTFNILIKFFCQKGLLGKALNVLEMMPKHGCTPNSRSYNPLIEGFCNEKSVDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVEILNQLSFEGFLSSLITYNIVIDRLLTVGKTEPAVELFEEMSRKGLEPDIVTYSTIIDGLLKVGKTEHGLELLEEMCSKGMKPNLITFTSVVGGLSRKGKVHEAIIFFNYLEGLGITPNAFIYNSIMMGLCKTQQTSRAIDFLAYMVANGCKPTESTYNILVKGISCEGFPEEASKLWNELYSKGLVKRSLVEKNTVKMQKKTSMATAKSTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAS6</accession>
    <name>V7BAS6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">alcohol dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G207700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a primary alcohol + NAD(+) = an aldehyde + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10736"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15734"/>
            <dbReference type="ChEBI" id="CHEBI:17478"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a secondary alcohol + NAD(+) = a ketone + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17087"/>
            <dbReference type="ChEBI" id="CHEBI:35681"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAS6"/>
    <dbReference type="STRING" id="3885.V7BAS6"/>
    <dbReference type="Gramene" id="ESW13571">
        <property type="protein sequence ID" value="ESW13571"/>
        <property type="gene ID" value="PHAVU_008G207700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVTHEIR"/>
    <dbReference type="OrthoDB" id="417550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051903">
        <property type="term" value="F:S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046294">
        <property type="term" value="P:formaldehyde catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000007">
        <property type="entry name" value="Alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000003">
        <property type="entry name" value="S-(hydroxymethyl)glutathione dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43880:SF7">
        <property type="entry name" value="ALCOHOL DEHYDROGENASE-LIKE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Alcohol dehydrogenase-like N-terminal" evidence="13">
        <location>
            <begin position="37"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Alcohol dehydrogenase-like C-terminal" evidence="12">
        <location>
            <begin position="209"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW13571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="384" mass="41303" checksum="9371B0A96450FB18" modified="2014-02-19" version="1" fragment="single">NLPTATEGQPLRCKAAICRKPGSSLSIEEIIVAPPLPREARIRIICTSLCHTDVTFWNMQVPPETSPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEFAPGMPRDGTSRFKNLKGETIEHFMFVSSFSEYTVVDIAHLTKIDAAIPPNMACLLSCGVSTGVGAAWIAAGVEPGSTVAVFGLGSIGLAVAEGARLCGATKIIGVDVNPEKYEIGKKFGLTDFVHAGESEDKSVSQVIIEMTDGGADYCFECVGKTSLMEEAYASCRKGWGKTIVLGLEKPGSKLSLSCSEVLVSGKSLEGCLFGGLKPKSHVPILVKRYMDKELNLDEFVTHEVQFQDINKAFDLLIQGNSLRCVIWMDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBD2</accession>
    <name>V7BBD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_008G224900g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBD2"/>
    <dbReference type="SMR" id="V7BBD2"/>
    <dbReference type="STRING" id="3885.V7BBD2"/>
    <dbReference type="Gramene" id="ESW13771">
        <property type="protein sequence ID" value="ESW13771"/>
        <property type="gene ID" value="PHAVU_008G224900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPYS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000317">
        <property type="entry name" value="Inactive leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000383">
        <property type="entry name" value="Leucine-rich repeat receptor protein kinase EMS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:001362">
        <property type="entry name" value="Lrr receptor-like serinethreonine-protein kinase gso2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000358">
        <property type="entry name" value="Putative leucine-rich repeat receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051809">
        <property type="entry name" value="Plant_receptor-like_S/T_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27008:SF596">
        <property type="entry name" value="OS02G0215500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27008">
        <property type="entry name" value="OS04G0122200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 21" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="16 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 21" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10 23" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 22" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="23">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5013311544" description="non-specific serine/threonine protein kinase" evidence="23">
        <location>
            <begin position="16"/>
            <end position="1009"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="654"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="24">
        <location>
            <begin position="710"/>
            <end position="1009"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="739"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW13771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1009" mass="110021" checksum="44C7F467ECF920BB" modified="2014-02-19" version="1">MAIILFVFLLGVVSQNLVYMMPGTIALALSSESDKLALLALKHKLTNGVPNALSSWNSSLHFCQWQGVTCSHRHMRVSVLHLENQNWGGTLGPPLANLTFLRGLILSNINLHGEIPTQIGRLKRLQVLDLSHNNLNGQIPIHLTNCSKLEVINLLYNKLSGKVPSWFGLGSMTRLNKLLLGANDLVGTIPPSLGNLSSLQNITLARNHLVGSIPHVLGRLSNLKELYLGLNYLSGVVPDSLYNLSNIQVLVLGVNQLSGNFPSKMQLAFPNLRAFFVGGNQFNGTFPSSISNITGLQAFDISSNGFSGPIPSTLGRLNKLKKFSISDNSFGSGRAQDLDFLSSLTNCTQLRILLLDWNEFGGVLPDLIGNFSTHLTWLSMGLNQISGMIPEGIGQLIGLTDFIMEDNYLEGIIPDSIGRLKNLVRLVLQENKLSGNSPTAIGNLTMLSELYLHTNRFVGGIPLSLKYCIRMQSFGVSTNNLSGNIPNQTFGNLEDLINLDLSNNSFTGSIPLEFGNLKHLSILHLYENKLSGEIPQELGACSALTELELESNFFRGTIPSFLGSLGSLEILDLSNNSFSGTIPGELQNLSYLNTLKLSFNHLYGEVPTGGVFNNVTAISLIGNKDLCGGIPQLNLPACSRVPSKKHRWSFRKKLILIIVIGVGGVLISSIISISIYYFRKKPKSFCSSRSLQNLYLKVSYGELHEATNGFSSSNLVGAGSFGCVYRGSLLHFEKPVAVKVLNLEALGASKSFTSECKALEKMKHQNVLKILTYFSGIDYNGDDFKAIVFELMLNGSLESLLHSDEELKSRNLNPNLQLWLNIALDVANALDYLHHGSEKTVVHCDIKPSNVLLDDEVVAHLGDFGLARLLTVVTGHASRDQMSSLAIKGTIGYVPPEYGAGGRVSAQGDIYSYGILVLEMLTGKKPTNDMFGESLSLHKFCEMAIPEGILEIVDSRLLVPYGVMETNITECLASFARIGVACSAELPIQRLGIKDVIMELNAIKQKLSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC85</accession>
    <name>V7BC85_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G076100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the band 7/mec-2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC85"/>
    <dbReference type="SMR" id="V7BC85"/>
    <dbReference type="STRING" id="3885.V7BC85"/>
    <dbReference type="Gramene" id="ESW15482">
        <property type="protein sequence ID" value="ESW15482"/>
        <property type="gene ID" value="PHAVU_007G076100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2620">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="434619at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007005">
        <property type="term" value="P:mitochondrion organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="entry name" value="Band 7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050710">
        <property type="entry name" value="Band7/mec-2_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032435">
        <property type="entry name" value="STML2-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001972">
        <property type="entry name" value="Stomatin_HflK_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327">
        <property type="entry name" value="STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327:SF10">
        <property type="entry name" value="STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16200">
        <property type="entry name" value="Band_7_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00721">
        <property type="entry name" value="STOMATIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="Band 7/SPFH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Band 7" evidence="4">
        <location>
            <begin position="8"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="STML2-like C-terminal extension" evidence="5">
        <location>
            <begin position="62"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="11770" checksum="E18565FB2474D9A2" modified="2014-02-19" version="1">MVNCVTKLLQEAINVAAKSWGLECLRYEIRDISPPRGVRAAMEMQAEAERKKRAQILESELKAASLRIAEQYIQAFSNIAKEGTTMLLPSSASNPANNFAITWSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEI4</accession>
    <name>V7BEI4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G120300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEI4"/>
    <dbReference type="STRING" id="3885.V7BEI4"/>
    <dbReference type="Gramene" id="ESW15990">
        <property type="protein sequence ID" value="ESW15990"/>
        <property type="gene ID" value="PHAVU_007G120300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSNX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FRPSRFH"/>
    <dbReference type="OrthoDB" id="1923116at2759"/>
    <dbReference type="PhylomeDB" id="V7BEI4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36802">
        <property type="entry name" value="OS02G0815400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36802:SF1">
        <property type="entry name" value="OS02G0815400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="272"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="303" mass="32774" checksum="6EFC5D48935CFD0B" modified="2014-02-19" version="1">MASAALQFWYLTAPISHRYPHQLASLTSLKFATPVSATNTIYLPKPLTVRFALTESDSPKSIQPDPQTLLQEIAGNLDLPPDYFAQFPRDLRLDLNDAAFDLSNGPVLDECGQELGETLLNLSRAWELAETATSHSLVKKIPLIEAKLTGSAKSALGKRLISAGRRFQSMGQYGQGEPQKIAKAMIAAGRALCASSMSEVTVEEPKEETRVLKFGELQVEITPDKANIGAVIGFVFGILSWEIAQGIQNIPDSSLEYANDNALLLAKSLKGALLALFYFSTFLSAFTSGGLVLLGLQLKSKKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEU0</accession>
    <name>V7BEU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">Origin of replication complex subunit 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G034200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ORC4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEU0"/>
    <dbReference type="SMR" id="V7BEU0"/>
    <dbReference type="STRING" id="3885.V7BEU0"/>
    <dbReference type="Gramene" id="ESW14981">
        <property type="protein sequence ID" value="ESW14981"/>
        <property type="gene ID" value="PHAVU_007G034200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2228">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFTFQRN"/>
    <dbReference type="OrthoDB" id="343623at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005664">
        <property type="term" value="C:nuclear origin of replication recognition complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009744">
        <property type="term" value="P:response to sucrose"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001041">
        <property type="entry name" value="Origin of replication complex subunit 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041664">
        <property type="entry name" value="AAA_16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016527">
        <property type="entry name" value="ORC4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032705">
        <property type="entry name" value="ORC4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12087">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12087:SF0">
        <property type="entry name" value="ORIGIN RECOGNITION COMPLEX SUBUNIT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13191">
        <property type="entry name" value="AAA_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14629">
        <property type="entry name" value="ORC4_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007858">
        <property type="entry name" value="ORC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="6 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orc1-like AAA ATPase" evidence="11">
        <location>
            <begin position="44"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="Origin recognition complex subunit 4 C-terminal" evidence="12">
        <location>
            <begin position="215"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00057448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00073314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR007858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW14981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="417" mass="48144" checksum="8BA4FFFFD3A7C206" modified="2014-02-19" version="1">MEPENHKTMAVNVLRSRICDPKFIFNNDYPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKSAVLEVVIQDLLQEYPDSISVIRLNGLLHCDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILKECGLAHKTIIFVLEEFDLFARGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQKLLIHMLTLPIDSSFPHDYAVEFNRKVQNIIEDRKFKETIKKYLNVDSCIKHLLRFLFCAVSHMDMQTGFLSQENFEIAFSSIQRQPKLECLRNCSNLELHILVCMKRLEVKEQSLCNFNSVMKEYKSMHDSFRTSEYYSRNVCLRAFEHLIHREMICFTDNRGQSLTVEFRPVKLLISSAELHQGLKAYSSCPAYLLKLMDREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFL9</accession>
    <name>V7BFL9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G060400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFL9"/>
    <dbReference type="SMR" id="V7BFL9"/>
    <dbReference type="STRING" id="3885.V7BFL9"/>
    <dbReference type="Gramene" id="ESW15291">
        <property type="protein sequence ID" value="ESW15291"/>
        <property type="gene ID" value="PHAVU_007G060400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASFWQEV"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd13999">
        <property type="entry name" value="STKc_MAP3K-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000034">
        <property type="entry name" value="Kinase suppressor of Ras 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051681">
        <property type="entry name" value="Ser/Thr_Kinases-Pseudokinases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329:SF228">
        <property type="entry name" value="KINASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00109">
        <property type="entry name" value="TYRKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="76"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="42638" checksum="7E6E84821E8EA5E1" modified="2014-02-19" version="1">MHSESGVSPKMEVESGVLNSKISSENLSSKSMFFSSDKFYLRNLDVMLEKHLSKIFSKSVAAKRPKETWEIDLAKLDIHYSVANGTYGTVYRGTYDSQDVAVKVLDWGEDGVAPAAKIASLRASFWQEVTIWQKLDHPNVTKFIGASIATSNLMIPLPTYGQNSIPSKTCCVIAEFLPGGTLKQYLSRNRQDKLPYEVVIQLALDLSRGLSYLHSKKIVHRDVKPDNMLLDCNKNLKIADFGVARIEAINQSEMTSETGTYGYMAPEVLNGKPYNRKCDVYSFGICLWEIYSCNVPFSKLSLATVSCAVINQHLRPDIPRSWPSALANIIRKCWDAKPERRPEMHEVVEMLEAIDTSKGGGMIRKDKNPRFFCFLPSPCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKN4</accession>
    <name>V7BKN4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Guanylate kinase 1</fullName>
            <ecNumber evidence="2">2.7.4.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">GMP kinase 1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G253800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GMP + ATP = GDP + ADP</text>
            <dbReference type="Rhea" id="RHEA:20780"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the guanylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKN4"/>
    <dbReference type="SMR" id="V7BKN4"/>
    <dbReference type="STRING" id="3885.V7BKN4"/>
    <dbReference type="Gramene" id="ESW17610">
        <property type="protein sequence ID" value="ESW17610"/>
        <property type="gene ID" value="PHAVU_007G253800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0707">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHTATKM"/>
    <dbReference type="OrthoDB" id="6334211at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004385">
        <property type="term" value="F:GMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00071">
        <property type="entry name" value="GMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.63.10:FF:000002">
        <property type="entry name" value="Guanylate kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000776">
        <property type="entry name" value="Guanylate kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011043">
        <property type="entry name" value="Gal_Oxase/kelch_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117:SF13">
        <property type="entry name" value="GUANYLATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117">
        <property type="entry name" value="GUANYLATE KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50965">
        <property type="entry name" value="Galactose oxidase, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="10">
        <location>
            <begin position="126"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00067520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00081967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW17610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="393" mass="43374" checksum="F44F6F3FF2FC366D" modified="2014-02-19" version="1">MGEAPIIIDDFESKSGTLETVTIIGDKKYVIGETAAESFYVKVQILDNNCPGEWVNVVELGTKPISCNGHSAVVLKDRILIFRKDSNPDDCIWFLEVDTTFVREQQKKNLGTEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHENLYGTSVEGVELVSDAGKRCILDIDVQGARSVRASALEAMFIFICPPSMDELEKRLRDRGTETEEQVLKRLRNAQAEIEQGTSSGIFDHILYNDNLKECYENLKKLLGLDGYVTPPKSAPKEIDLPRDHSVSKIDDKIIINSTSSILEKESKNLIMLDVSSLKGGAPGRTRGLNFEAIDSFSEGFNGSGNEPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BL23</accession>
    <name>V7BL23_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G2281001g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BL23"/>
    <dbReference type="STRING" id="3885.V7BL23"/>
    <dbReference type="Gramene" id="ESW17301">
        <property type="protein sequence ID" value="ESW17301"/>
        <property type="gene ID" value="PHAVU_007G2281001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0I3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TWASIIV"/>
    <dbReference type="OrthoDB" id="1502398at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1780">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43009:SF6">
        <property type="entry name" value="HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43009">
        <property type="entry name" value="HOMOGENTISATE SOLANESYLTRANSFERASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="310"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="351" mass="39686" checksum="701E0078AF8F99CA" modified="2014-02-19" version="1" fragment="single">MVIVGANFWSRKLSSNSIYYASCRGSEVSQHKIKAQIQYNYLRFQQSTFNHYYNSIEGRSTNEENKTKYIVKAVTLPSPESESQRFNFKNSVDSVKNFLTFCTTISASLIAVERLSDISPLFFIGLLQALLPHLFMIFYVNGVNQVFDFEIDKINKPYLPLASGKLSFRNGVFIVASSAILSLGFHLMIGSPALISNILLNFILWTGYSVNAPFLRWKQYPVASALITFVFKRPVVFTRSLIVSMVFNALYSIGLALAKDIPDIEGDKQHGIDSFTMRLGQKKVFWICVFLYEMAFGVAFLAGATSSSPVWIKIATSLGSFVLASILWYQTKYVDVTNPASTRSFYKFIWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BME5</accession>
    <name>V7BME5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">40S ribosomal protein S24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G099500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eS24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BME5"/>
    <dbReference type="SMR" id="V7BME5"/>
    <dbReference type="STRING" id="3885.V7BME5"/>
    <dbReference type="Gramene" id="ESW19139">
        <property type="protein sequence ID" value="ESW19139"/>
        <property type="gene ID" value="PHAVU_006G099500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3424">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RKPRERC"/>
    <dbReference type="OrthoDB" id="1379925at2759"/>
    <dbReference type="PhylomeDB" id="V7BME5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.3370:FF:000001">
        <property type="entry name" value="40S ribosomal protein S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00545">
        <property type="entry name" value="Ribosomal_eS24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053709">
        <property type="entry name" value="eRP_eS24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001976">
        <property type="entry name" value="Ribosomal_eS24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018098">
        <property type="entry name" value="Ribosomal_eS24_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_uL23/eL15/eS24_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10496">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01282">
        <property type="entry name" value="Ribosomal_S24e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="Ribosomal proteins S24e, L23 and L15e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00529">
        <property type="entry name" value="RIBOSOMAL_S24E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="104"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="109"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="137" mass="15747" checksum="5EBA671C8F5F18F6" modified="2014-02-19" version="1">MADKAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYEVKDPNTVFVFKFRTHFGGGKSTGFGLIYDSVDNAKKYEPKYRLIRNGLDTKIEKSRKQLKERKNRAKKIRGVKKTKASDAAKAGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNE7</accession>
    <name>V7BNE7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Rx N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G0526000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNE7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="100" mass="11741" checksum="D850CFE757F4C177" modified="2014-02-19" version="1" fragment="single">MCCPCIAEILSKAIEFGITIFWKTVKKIRDVPKEVQKIEEELGDLRDSIYEADKDVEAERDDRLREDKKRKLMQSRKELFLKEDVIDEHDIRIGHVPPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPQ5</accession>
    <name>V7BPQ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Bromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G168500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPQ5"/>
    <dbReference type="SMR" id="V7BPQ5"/>
    <dbReference type="STRING" id="3885.V7BPQ5"/>
    <dbReference type="Gramene" id="ESW19952">
        <property type="protein sequence ID" value="ESW19952"/>
        <property type="gene ID" value="PHAVU_006G168500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1474">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WELNPPG"/>
    <dbReference type="OrthoDB" id="21449at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd05506">
        <property type="entry name" value="Bromo_plant1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052442">
        <property type="entry name" value="Env_Response_Regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037377">
        <property type="entry name" value="GTE_bromo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46136:SF19">
        <property type="entry name" value="TRANSCRIPTION FACTOR GTE12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46136">
        <property type="entry name" value="TRANSCRIPTION FACTOR GTE8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Bromo" evidence="9">
        <location>
            <begin position="91"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="19"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="191"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="450"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="46"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="66"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="191"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="456"/>
            <end position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="563" mass="63644" checksum="B69C73D1485A2BA9" modified="2014-02-19" version="1">MITTETLLPSAKLKIKFSTKRMEVDSGPKREFGQEVSHTDERRRFNSNGKLSGLNSNKRGPPESFDSQKVKNPRVDRKGSVQCATILKSLMSHPYSWVFSKPVDPVALNIPDYFTIISHPMDFGTIKTKLERNIYSGTEEFADDVRLTFSNAMKYNPPSNDVHLMAKELCKIFDRKWKDLVRKLKCEDEHSKSETETIKETSGRSLDTMHSRHKESWTKKTHVSEKKGIQKSISSASKDARVEEPKLSQILSKFIEKDLHKGRKRSRDREHSAGSLKACSTVCLVTCKCNICGDTNCHCVLQGNSTQLSSDISSEGSEGRDLIACGADTLRRDCLAKSSSSVEKKSDSDGAVSSLDSEHICPSSKHVTFNTDASSGEVWSTPILPVQLSPKRALRAAMLKSRFADTILKAQQKTLLEHGDKRNPQKMLLEKERLERIQREERARIEAQIKTAEAAARSRAEEESRQRREKEREAARVAIEKMKKTVDIEHNMEIIRELESLSGCTLSYKAVGGRNGYKVALDTWDKPQLENPLERLGLFIKEEYSVEDEEFLNGAREEGEIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRN7</accession>
    <name>V7BRN7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta</fullName>
            <shortName evidence="11">PFP</shortName>
            <ecNumber evidence="11">2.7.1.90</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">6-phosphofructokinase, pyrophosphate dependent</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">PPi-PFK</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Pyrophosphate-dependent 6-phosphofructose-1-kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">PFP-BETA</name>
        <name evidence="13" type="ORF">PHAVU_006G145300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis.</text>
    </comment>
    <comment type="function">
        <text evidence="2">Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>beta-D-fructose 6-phosphate + diphosphate = beta-D-fructose 1,6-bisphosphate + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="2.7.1.90"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="11">Allosterically activated by fructose 2,6-bisphosphate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="11">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Tetramer of two alpha (regulatory) and two beta (catalytic) chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'Long' sub-subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.90" evidence="11"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRN7"/>
    <dbReference type="SMR" id="V7BRN7"/>
    <dbReference type="STRING" id="3885.V7BRN7"/>
    <dbReference type="Gramene" id="ESW19673">
        <property type="protein sequence ID" value="ESW19673"/>
        <property type="gene ID" value="PHAVU_006G145300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2440">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAKKYWH"/>
    <dbReference type="OrthoDB" id="537915at2759"/>
    <dbReference type="PhylomeDB" id="V7BRN7"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003872">
        <property type="term" value="F:6-phosphofructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047334">
        <property type="term" value="F:diphosphate-fructose-6-phosphate 1-phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006002">
        <property type="term" value="P:fructose 6-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009749">
        <property type="term" value="P:response to glucose"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.480:FF:000002">
        <property type="entry name" value="Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.460">
        <property type="entry name" value="Phosphofructokinase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.480">
        <property type="entry name" value="Phosphofructokinase, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01980">
        <property type="entry name" value="Phosphofructokinase_II_Long"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022953">
        <property type="entry name" value="ATP_PFK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011183">
        <property type="entry name" value="PfpB_PPi_PFK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000023">
        <property type="entry name" value="Phosphofructokinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02477">
        <property type="entry name" value="PFKA_PPi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005482">
        <property type="entry name" value="PRK07085.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43650">
        <property type="entry name" value="PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43650:SF1">
        <property type="entry name" value="PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT BETA 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00365">
        <property type="entry name" value="PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005677">
        <property type="entry name" value="PPi_PFK_PfpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00476">
        <property type="entry name" value="PHFRCTKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="Phosphofructokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="3 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phosphofructokinase" evidence="12">
        <location>
            <begin position="91"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="221"/>
            <end position="223"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="260"/>
            <end position="261"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="268"/>
            <end position="270"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="434"/>
            <end position="437"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity and substrate specificity; stabilizes the transition state when the phosphoryl donor is PPi; prevents ATP from binding by mimicking the alpha-phosphate group of ATP" evidence="11">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity; stabilizes the transition state when the phosphoryl donor is PPi" evidence="11">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW19673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="561" mass="61459" checksum="A569EBB7518491A9" modified="2014-02-19" version="1">MAPVPNGTVPSAPVTGRLSSVYSEVQKKRVDHALPLPSVLKHPFTLLDGPPSSAAGNPDEIAKLFPHLFGQPSVALVPSDPRVAQTHQKLKIGVVLSGGQAPGGHNVISGIFDYLQERAPGSTLYGFRGGPAGIMKCKYVELTSEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKNLKTHVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLTLKNVTDYIVDVVCKRAEISYNYGVILIPEGLIDFIPEVQHLIGELNEILAHDIVDEGGLWKKKLSDQSLKLFDFLPQAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRREEGKYKGQFRGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLSAPVEEWTVGGTALTLLMDVERRHGKFKPVIKKAMVELEGAPFKMFASLRDEWALKNCYVSPGPIQFSGPGSDATNHTLLLELESQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSI3</accession>
    <name>V7BSI3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G173100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSI3"/>
    <dbReference type="Gramene" id="ESW20005">
        <property type="protein sequence ID" value="ESW20005"/>
        <property type="gene ID" value="PHAVU_006G173100g"/>
    </dbReference>
    <dbReference type="OMA" id="ITIWHNI"/>
    <dbReference type="OrthoDB" id="777403at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33133:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33133">
        <property type="entry name" value="OS08G0107100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="313" mass="35196" checksum="B1205121BD4D832F" modified="2014-02-19" version="1">MGLAGFLRKLQDLSTIHKLIFKILLCFFVLPPSFYYTFFVLGYLSNVFLSNSDLNGFADATFHYVSFITQVEGFAVLGISMFSLLIPILYILDSKKKVDSEAELSITGLILIVTKPARSLLVTWFLVRLIKLGCVSFGILVLHHHLALIINSSCEQQHELSEVLASNVGTVIFLAGGILIFTYVGTFGNLAIDISVREEISGSKALKKASQVLEGKKKLVGFLMNLVLGVISVGLFLWYLYLNTCSKVSVEFKKNMMMIIWNFGIYQVEFYTWALFSILYSICKISSGNKFQPQGCLKRILMEEEEEEKEPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT37</accession>
    <name>V7BT37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Delta(3)-Delta(2)-enoyl-CoA isomerase</fullName>
            <ecNumber evidence="5">5.3.3.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G189000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a (3E)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:45228"/>
            <dbReference type="ChEBI" id="CHEBI:58521"/>
            <dbReference type="ChEBI" id="CHEBI:85097"/>
            <dbReference type="EC" id="5.3.3.8"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a (3Z)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:45900"/>
            <dbReference type="ChEBI" id="CHEBI:85097"/>
            <dbReference type="ChEBI" id="CHEBI:85489"/>
            <dbReference type="EC" id="5.3.3.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism; fatty acid beta-oxidation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.8" evidence="5"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT37"/>
    <dbReference type="SMR" id="V7BT37"/>
    <dbReference type="STRING" id="3885.V7BT37"/>
    <dbReference type="Gramene" id="ESW20200">
        <property type="protein sequence ID" value="ESW20200"/>
        <property type="gene ID" value="PHAVU_006G189000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS1J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SIVCTNP"/>
    <dbReference type="OrthoDB" id="410701at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004165">
        <property type="term" value="F:delta(3)-delta(2)-enoyl-CoA isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd06558">
        <property type="entry name" value="crotonase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.226.10:FF:000049">
        <property type="entry name" value="Enoyl-CoA delta isomerase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.226.10">
        <property type="entry name" value="2-enoyl-CoA Hydratase, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11941">
        <property type="entry name" value="ENOYL-COA HYDRATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11941:SF75">
        <property type="entry name" value="ENOYL-COA HYDRATASE_ISOMERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="ClpP/crotonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="25592" checksum="2EB2AC12A9265F6D" modified="2014-02-19" version="1">MCSLEKRGNVWVLTLAGDDPEHRLNQTLIDSLTSALSRLASHATPGSVLLTTANGKFFSNGFDLAWARAASSSSAATDRLQFLVDSLKPVIAALLSLPMPTIAAVNGHASAAGFILAISHDYVLMRGDRGVLYMPEVDLGLPLPEYFTAVMRSKLKSPAVLRDLVLGGAKMKAAEAVKAGIVDSAHDSEERTVEAAMRLGEELARRKWVGEVYAEIRKSLYPVACTSLALTQKAIVSKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT58</accession>
    <name>V7BT58_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G191100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the crooked-neck family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT58"/>
    <dbReference type="SMR" id="V7BT58"/>
    <dbReference type="STRING" id="3885.V7BT58"/>
    <dbReference type="Gramene" id="ESW20228">
        <property type="protein sequence ID" value="ESW20228"/>
        <property type="gene ID" value="PHAVU_006G191100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2047">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCYLLER"/>
    <dbReference type="OrthoDB" id="10067343at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071014">
        <property type="term" value="C:post-mRNA release spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000974">
        <property type="term" value="C:Prp19 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071007">
        <property type="term" value="C:U2-type catalytic step 2 spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000349">
        <property type="term" value="P:generation of catalytic spliceosome for first transesterification step"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000023">
        <property type="entry name" value="Pre-mRNA-splicing factor SYF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000411">
        <property type="entry name" value="pre-mRNA-splicing factor SYF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000390">
        <property type="entry name" value="Tetratricopeptide repeat (TPR)-like superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055433">
        <property type="entry name" value="HAT_Syf1-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056350">
        <property type="entry name" value="HAT_Syf1_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055430">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045075">
        <property type="entry name" value="Syf1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246">
        <property type="entry name" value="PRE-MRNA SPLICING FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11246:SF5">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SYF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23231">
        <property type="entry name" value="HAT_Syf1_CNRKL1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23233">
        <property type="entry name" value="HAT_Syf1_CNRKL1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23220">
        <property type="entry name" value="HAT_Syf1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1-like N-terminal HAT-repeats" evidence="11">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-mRNA-splicing factor SYF1 central HAT repeats" evidence="9">
        <location>
            <begin position="76"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-mRNA-splicing factor Syf1/CRNKL1-like C-terminal HAT-repeats" evidence="10">
        <location>
            <begin position="316"/>
            <end position="717"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="738"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="739"/>
            <end position="753"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="754"/>
            <end position="769"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="788"/>
            <end position="804"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF23220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF23231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF23233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="823" mass="96011" checksum="AA2AF5DCD4054A87" modified="2014-02-19" version="1">MHKMPRIWIMYLQTLTNQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPSHIEDFIEFLLNSSLWQEASDRLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGGIRKFTDEVGRLWTSLAKYYIRRGLPEKARDVFEEGMSTVITVRDFSVIFDSYSQFEEIMLEESMLAYKMDDEGEENGFEEVEEEDIRFRGRLAEEDFERKILHGFWLNDKNDIDLRLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAVGKPHTLWVAFAKLYEQHKDLANARVIFDKAVQVNYKTVDNLASVWCEWAEMELKHKNFKGALELMRRATAEPSVEVKRKVAADGNEPAQMKLHKSLRLWTFYVDLEESLGSLDSTRAVYERILDLRIATPQIIINYAYFIWENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKNKLERARELFKSAVESAPADQVKPLYLQYAKLEEDYGLAGEAMKVYDQATEAVPDNEKLSMYEIYISRAAEIFGVPETRRIYEKAINIYENAIKSDISNKDLLNKDIKTLSLKYAELEKSLGEIYRARELYGFASKYADPRSDPEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASNRQTHFLMQKDQTVNLDEAKDKLNQAGIPEDEMAALEMQLPPAADNTVTKDRKVGFVSAGVESQSDGGIKTSANNEDIELPEDSDSDDGDDKIEIAQKDVPSAVFGGLIRKRDEDDKNGEIDAAKDKDNENRLGALERIKRLKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT59</accession>
    <name>V7BT59_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G191300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT59"/>
    <dbReference type="STRING" id="3885.V7BT59"/>
    <dbReference type="Gramene" id="ESW20230">
        <property type="protein sequence ID" value="ESW20230"/>
        <property type="gene ID" value="PHAVU_006G191300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2641">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAKFICI"/>
    <dbReference type="OrthoDB" id="5348404at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005178">
        <property type="entry name" value="Ostalpha/TMEM184C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23423">
        <property type="entry name" value="ORGANIC SOLUTE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03619">
        <property type="entry name" value="Solute_trans_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01417">
        <property type="entry name" value="Solute_trans_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="214"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW20230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="34227" checksum="BB795E38DD6C2C75" modified="2014-02-19" version="1">MIDLSTLNPAQITVMGSAFCVMLSMHFTSQLLSQHLFYWKNPKEQKAILIIILMAPLYATVSFVGLLDIRGSKEFFTFLESVKECYEALVIAKFLALMYSYLNISISGNVVPDEIKGREIHHSFPMTLFQPHTVHLNYRNLKLLKYWTWQFVVIRPVCSILMISLQLLGLYPTWLSWTFTIILNISVSLALYSLVVFYHVFAKELAPHTPLAKFLCIKGIVFFCFWQGMLLEVLAKFGVIQSRHLRLDVEHIEEAMQNILVCVEMVIFSVLQQYAYHPAPYSGEVEKMLRQNKKND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BU19</accession>
    <name>V7BU19_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TOD1/MUCI70 glycosyltransferase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G072000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BU19"/>
    <dbReference type="STRING" id="3885.V7BU19"/>
    <dbReference type="Gramene" id="ESW21454">
        <property type="protein sequence ID" value="ESW21454"/>
        <property type="gene ID" value="PHAVU_005G072000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT24">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DWNINMF"/>
    <dbReference type="OrthoDB" id="1905162at2759"/>
    <dbReference type="PhylomeDB" id="V7BU19"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006852">
        <property type="entry name" value="TOD1_MUCI70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048354">
        <property type="entry name" value="TOD1_MUCI70_glycTrfase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12956">
        <property type="entry name" value="ALKALINE CERAMIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12956:SF61">
        <property type="entry name" value="TRNA (MET) CYTIDINE ACETYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04765">
        <property type="entry name" value="TOD1_MUCI70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="TOD1/MUCI70 glycosyltransferase-like" evidence="3">
        <location>
            <begin position="206"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="107"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="114"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="580" mass="66646" checksum="4966DCEDE54A7E87" modified="2014-02-19" version="1">MSGVSLGVRTGSYGALQNGNVSVPMLVRRPSKTLLYNPREKERGFFFICRLLGRGRVAMLLMFALGLCVFVFGCFTVYKGGSITSEIEDTRSYAITRYEILRPRGVVEDKSQDSNSSRLLSLTSRYRSTSRPPPAPNSLSLSKSKGKRVYFPTWRHRCDRFAFPPPPPVDRRRTGPRPCPVCYIPVKQAVASMPISPSKSPILRSLTYVHDENSIKSERHGGSDFGGYPSLEERDAAFDIKETMTVHCGFVKGSRPGRLTGFDFDEADLLELDKYHDVIVASAIFGNYDVIQQPRNISSEAKRNIPFYMFIDEETEMYMKNASILSSSRRVGLWRIIVVHNIPYADSRRNGKVPKLLLHRIFPNARYSIWIDGKLQLVVDPYQVLERFLWRPNATFAISRHYRRFDVFVEAEANKVAGKYENGSIDNQIQFYKVYDGLTHYSRDKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMAKTGWSINMFMDCERRNFVIQGYHRDILEQMPPPAVVTRRPSVPASYYNKFHLRNHPRRGRGERRSGSNHHHRVFGTVMNHILI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUU8</accession>
    <name>V7BUU8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G016500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7BUU8"/>
    <dbReference type="STRING" id="3885.V7BUU8"/>
    <dbReference type="Gramene" id="ESW20808">
        <property type="protein sequence ID" value="ESW20808"/>
        <property type="gene ID" value="PHAVU_005G016500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R4BG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEWFDHI"/>
    <dbReference type="OrthoDB" id="1901675at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10140:FF:000007">
        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058546">
        <property type="entry name" value="RPS4B/Roq1-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF422">
        <property type="entry name" value="RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23286">
        <property type="entry name" value="LRR_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="6">
        <location>
            <begin position="19"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="1324"/>
            <end position="1393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1427" mass="162242" checksum="080365653358C946" modified="2014-02-19" version="1">MAIMLSEGASSSSAFERGWTYDVFLSFRGEDTRRSFTGFLYHGLRQSGINVFIDDDKLRRGEELSLALLAAIEESRIAIIVFSQNYASSTWCLDELAKILECYKTRGQLVWPVFFHVDPSEVRHQRGSFGTAMAKHEVRFKGNVEKMQKWKRALFEAANFSGWTLENGYEFQLIQEIIKEASEKLNHTILHIAEYPVGIETRISEVMPLLHIEPGEDIRVIGIHGLGGIGKTTIAGAIYNLIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKNIKLGSIYKGIPIIKKRLCCKKVLLVIDDVDKLEQLQALAGGRDWFGFGSVIIITTRDKHLLAAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEICNRVVLYAEGLPLALKVMGSTLFGKTVAEWKSALGKYEKIPSREVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTFGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPIEPGKRSRLWHHEDVFEVLTENTGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLQILIVRNGHFFGSPQHLPNNLRLLDWMKYPSSLPSTFQPKKLVVLNLSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPEISRVPNLTELNLDYCTNLEELHESVGFLEKLVEFRAYGCTKLKVFPSAIRLTSLRSLILNWCSSLQNFPAILGKMDNLMSLSIEGTGIKELPPSIGNLSGLQEFSMTSCLNLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLTNMGEPTLTFGNIQSLNLENCGLVDEDLPIIFNSFPKLASVVLSENNFVSLPSCIQECPCLELLHLDNCKKLQEIPAFPPNMQYINARNCTSLTAESSNLLLNKETFEGWELQVMVPGTRVPAWFDHVTKGEYMTFWVREKFPVIIICFALEVESEMKKTFNCEIRFYINGEEVYELEIPRGFSDMVTDHVWLYDLRTHSSIHWPSLDLYLMDGWNQVEISCEKISGASNVSVSWCGVHVCKQEANMEDILLTDPDADLDSESEKSIRSTQDSQYCRRVDDNCYIFNNLEGCETPDIAACHTGTDQNQDKNLLHEKTLNGVTKDSMLSLPHEDIGGVKASGSNMLVSDHLVKAQPQSQVTSFTQTPQNSNRSTMVLPTTVEFLENQTSLLTIDDGDMEAFYAVLDDEISVVSLNNDFIVVSELANKRPSEETKKALKTLQDCVTKQFSALLGPDEYSTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTDWSRDYTCESKKMESTTAKLLKADELEKCLEANKIHFKEVVCMENELCNELAYLEERKRELEEQINGVKANISASQAAKNMATQRKREVFGEAKILKAQRDELREQVPHLRDEHELAMKIQSNIRDEWSKLGEKFNYGLRHGKIDEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXH3</accession>
    <name>V7BXH3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G0567000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXH3"/>
    <dbReference type="STRING" id="3885.V7BXH3"/>
    <dbReference type="Gramene" id="ESW21271">
        <property type="protein sequence ID" value="ESW21271"/>
        <property type="gene ID" value="PHAVU_005G0567000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ60">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1716489at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000932">
        <property type="term" value="C:P-body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000290">
        <property type="term" value="P:deadenylation-dependent decapping of nuclear-transcribed mRNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033962">
        <property type="term" value="P:P-body assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039900">
        <property type="entry name" value="Pat1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21551">
        <property type="entry name" value="TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21551:SF25">
        <property type="entry name" value="TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="103"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="203"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="267"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="33007" checksum="383183C59CBC8B3A" modified="2014-02-19" version="1" fragment="single">MVDMDGFGAGGGVDGAPITQNLRELGNVTSEGAVFDASQYAFFGKEVELGGLEDNDRLPTLDSNEEEFFFNGEDAEDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEWSQREDSVNWFDQNPYDGEGSTDGKRWSSQPHSSLAHLQDSKPLYRTSSYPEQQRQEQHYHLQHCSSEPVPNWLDQHIYDTETAHDHDGKRWSSQPHSSIPHLPDSKPLYRTSSYPDKQQELPRFSSEPILVPKSSFTSYPPPGGLSQMASPSHSTGHLNIPYHTGAAQMAWSSQNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ92</accession>
    <name>V7BZ92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G030100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ92"/>
    <dbReference type="SMR" id="V7BZ92"/>
    <dbReference type="STRING" id="3885.V7BZ92"/>
    <dbReference type="Gramene" id="ESW23237">
        <property type="protein sequence ID" value="ESW23237"/>
        <property type="gene ID" value="PHAVU_004G030100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2190">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HITFENH"/>
    <dbReference type="OrthoDB" id="442947at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009911">
        <property type="term" value="P:positive regulation of flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd22459">
        <property type="entry name" value="KH-I_PEPPER_rpt1_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd22460">
        <property type="entry name" value="KH-I_PEPPER_rpt2_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.310.210:FF:000002">
        <property type="entry name" value="KH domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.210">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10288">
        <property type="entry name" value="KH DOMAIN CONTAINING RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="7">
        <location>
            <begin position="40"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="7">
        <location>
            <begin position="137"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="7">
        <location>
            <begin position="281"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="7">
        <location>
            <begin position="367"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="529"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="529"/>
            <end position="540"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="548" mass="58438" checksum="B0AC04B7656DBAB3" modified="2014-02-19" version="1">MGGQRSGYGKRPNSQSDYDNGPNKRRNHGEDREQFVIDTEDTVFRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTIYSPSDETNSVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDAAVVRKALHQVASRLHDNPSRSQHLLTSAVPGVYPGGSSLIGPTPGAPIVGIAPLVGAYGGYKGDAGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSSTEGEECLITILTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRVISKENLPKIASEDDEMVQISGDLDVAKEALVHVLTRLRANIFDREGALSAFLPVMPYLPVSADGSDGLNFDGRDGKRHGRGHSYSSGYGGSSDLTGGDFYGSYGGSQLGSSGAYGAYGSYSFGRSSSAGLSSQSGVSRRRNHAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZR0</accession>
    <name>V7BZR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Clp ATPase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G0441000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZR0"/>
    <dbReference type="STRING" id="3885.V7BZR0"/>
    <dbReference type="eggNOG" id="KOG1051">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHIDAMG"/>
    <dbReference type="OrthoDB" id="987204at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd19499">
        <property type="entry name" value="RecA-like_ClpB_Hsp104-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000025">
        <property type="entry name" value="ATP-dependent Clp protease subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050130">
        <property type="entry name" value="ClpA_ClpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638">
        <property type="entry name" value="ATP-DEPENDENT CLP PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11638:SF18">
        <property type="entry name" value="HEAT SHOCK PROTEIN 104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="4">
        <location>
            <begin position="32"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="Clp ATPase C-terminal" evidence="5">
        <location>
            <begin position="202"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="348" mass="38725" checksum="72058486500CF2B9" modified="2014-02-19" version="1" fragment="single">LHKRVVGQDQAVNSVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGLSGKSSMQVGRDKVMQEVRRHFRPELLNRLDEIVVFDPLSHQQLRKVARLQMKDVASRLAERGIAMAVTDAALDYILSESYDPVYGARPIRRWLEKKVVTELSRMLVKEEIDENSTVYIDAGPEGSDLIYRVENNGGMVDAVTGQKSDILIQMPNGPLQRSDAAQAVKKLKIEQMDEDEDGEMET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0I8</accession>
    <name>V7C0I8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G003700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0I8"/>
    <dbReference type="SMR" id="V7C0I8"/>
    <dbReference type="Gramene" id="ESW22893">
        <property type="protein sequence ID" value="ESW22893"/>
        <property type="gene ID" value="PHAVU_004G003700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NGCLLMQ"/>
    <dbReference type="OrthoDB" id="1435576at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025091750" description="S-protein homolog" evidence="6">
        <location>
            <begin position="27"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="93" mass="10480" checksum="064DD34DD09A8683" modified="2014-02-19" version="1" fragment="single">MVLSSKITLVFCLLLTIFLGVQLKCGESIAPLFPPKVTVVITNSLFNGILALHCKSKDNDLGVQHLNVEQSYSFSFFPNYFIPSTLFFCQFVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C311</accession>
    <name>V7C311_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BolA-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G141000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the BolA/IbaG family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C311"/>
    <dbReference type="SMR" id="V7C311"/>
    <dbReference type="STRING" id="3885.V7C311"/>
    <dbReference type="Gramene" id="ESW24562">
        <property type="protein sequence ID" value="ESW24562"/>
        <property type="gene ID" value="PHAVU_004G141000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2313">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTRVEIH"/>
    <dbReference type="OrthoDB" id="411584at2759"/>
    <dbReference type="PhylomeDB" id="V7C311"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.90:FF:000004">
        <property type="entry name" value="SufE-like protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.90">
        <property type="entry name" value="BolA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002634">
        <property type="entry name" value="BolA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036065">
        <property type="entry name" value="BolA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46230:SF6">
        <property type="entry name" value="PROTEIN BOLA1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01722">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003113">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82657">
        <property type="entry name" value="BolA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW24562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="11228" checksum="A798619ADE1E7C19" modified="2014-02-19" version="1">MGSRGATVVLSRANRIRTKLQSALEATVLEVDDVSYQHAGHAAVRGSSDKETHFNVKVVSSKFEGQSLVKRHRLVYDALADELQSGLHALSILAKTPQEASSAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3G6</accession>
    <name>V7C3G6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein DETOXIFICATION</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G152200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3G6"/>
    <dbReference type="SMR" id="V7C3G6"/>
    <dbReference type="STRING" id="3885.V7C3G6"/>
    <dbReference type="Gramene" id="ESW24697">
        <property type="protein sequence ID" value="ESW24697"/>
        <property type="gene ID" value="PHAVU_004G152200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PSAFMVW"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="16"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="89"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="189"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="27753" checksum="F0466455E26401E2" modified="2014-02-19" version="1" fragment="single">MELWRKEIREEAKKQVWLAGPMIFVCVFQFSLQMISLMFVGHLGELFLAAVSLSSSIVSATGFNVMMGLSSALDTFCGQSYGAKQYHMLGVHTQGAMLVLTIVSIPVSIIWVYLEPILVLLHQNKEVAALAQLYARYLIPSLSANALLRCITKFLQTQSIVFPMVLATGLTTLLHLLLCWIFITKFEFGIKGSAIAICISNWFNTIILALYIRFSPSCKATWTGFSKESLHNIPNFLRLAFPSAVMMW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C508</accession>
    <name>V7C508_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G019600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Potential calcium sensor.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C508"/>
    <dbReference type="SMR" id="V7C508"/>
    <dbReference type="STRING" id="3885.V7C508"/>
    <dbReference type="Gramene" id="ESW25247">
        <property type="protein sequence ID" value="ESW25247"/>
        <property type="gene ID" value="PHAVU_003G019600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEDCELM"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="PhylomeDB" id="V7C508"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043226">
        <property type="term" value="C:organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000178">
        <property type="entry name" value="Calmodulin-2 A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000089">
        <property type="entry name" value="calmodulin-like protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0106">Calcium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="50"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="86"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="123"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="6">
        <location>
            <begin position="159"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="192" mass="21020" checksum="8D5BFBC71183B479" modified="2014-02-19" version="1">MGLRSLFGKKKKLPKTTSTLSNTSSSSSPPSSLPSSSLSLSFMHNHSRAPVTVELEYVFRKFDTNGDGRISSSELGSMMKCLGQHATEEEVSRMIQEIDCDGDGHINLQEFIELNTKGVEPDEVLENLKEAFSIFDIDGNGSITAEELHMVMASLGDECSLDECHRMIAGVDGDGNGMINFEEFKIMMTGNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C664</accession>
    <name>V7C664_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G166600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C664"/>
    <dbReference type="Gramene" id="ESW24858">
        <property type="protein sequence ID" value="ESW24858"/>
        <property type="gene ID" value="PHAVU_004G166600g"/>
    </dbReference>
    <dbReference type="OMA" id="EVETEYW"/>
    <dbReference type="OrthoDB" id="1430781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="243"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="297" mass="33038" checksum="E3DD368D43653A5D" modified="2014-02-19" version="1">MGNSPSGPRFLGNGNYCSYHIQLDDAATITVTKHQQKSELKYEVDGMTCTLFISRSLERNSGDENISISLTDFYLNIQKYTTLVSPRCATIYVSVKKERKSDGFLCIPLEVFDIFSTEGKTKQYGVSRRGEVETEYWAYGCGTRMGLLVTEKKKKKSDEEQVYVATVAHYYVNSSSGRNRGGDIGFSVVVKIGVHNGVLDFSVDGPVEHPSSALLYMIQEVIRTGTWKLSACPHCKNIQSQSRWLSESEGNDTTLPPPPPPPRYGGSQNAANMGRFNGDGNGSIIQANKINFNKWWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7Q1</accession>
    <name>V7C7Q1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">S-adenosylmethionine decarboxylase proenzyme</fullName>
            <ecNumber evidence="12">4.1.1.50</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G097900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>S-adenosyl-L-methionine + H(+) = S-adenosyl 3-(methylsulfanyl)propylamine + CO2</text>
            <dbReference type="Rhea" id="RHEA:15981"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57443"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="4.1.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="12">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Amine and polyamine biosynthesis; S-adenosylmethioninamine biosynthesis; S-adenosylmethioninamine from S-adenosyl-L-methionine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the eukaryotic AdoMetDC family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.50" evidence="12"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7Q1"/>
    <dbReference type="SMR" id="V7C7Q1"/>
    <dbReference type="STRING" id="3885.V7C7Q1"/>
    <dbReference type="Gramene" id="ESW26187">
        <property type="protein sequence ID" value="ESW26187"/>
        <property type="gene ID" value="PHAVU_003G097900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0788">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WFEESSN"/>
    <dbReference type="OrthoDB" id="1068353at2759"/>
    <dbReference type="PhylomeDB" id="V7C7Q1"/>
    <dbReference type="UniPathway" id="UPA00331">
        <property type="reaction ID" value="UER00451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004014">
        <property type="term" value="F:adenosylmethionine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008295">
        <property type="term" value="P:spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006597">
        <property type="term" value="P:spermine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.360.50:FF:000001">
        <property type="entry name" value="S-adenosylmethionine decarboxylase proenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.90.10:FF:000002">
        <property type="entry name" value="S-adenosylmethionine decarboxylase proenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.360.50">
        <property type="entry name" value="S-adenosylmethionine decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.90.10">
        <property type="entry name" value="S-adenosylmethionine decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048283">
        <property type="entry name" value="AdoMetDC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001985">
        <property type="entry name" value="S-AdoMet_decarboxylase_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016067">
        <property type="entry name" value="S-AdoMet_deCO2ase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018166">
        <property type="entry name" value="S-AdoMet_deCO2ase_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00535">
        <property type="entry name" value="SAM_DCase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11570">
        <property type="entry name" value="S-ADENOSYLMETHIONINE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11570:SF38">
        <property type="entry name" value="S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01536">
        <property type="entry name" value="SAM_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001355">
        <property type="entry name" value="S-AdenosylMet_decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56276">
        <property type="entry name" value="S-adenosylmethionine decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01336">
        <property type="entry name" value="ADOMETDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="4 12" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="8 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 12" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="10 12" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="9 12" id="KW-0704">Schiff base</keyword>
    <keyword evidence="5 12" id="KW-0745">Spermidine biosynthesis</keyword>
    <keyword evidence="7 12" id="KW-0865">Zymogen</keyword>
    <feature type="chain" id="PRO_5042325364" description="S-adenosylmethionine decarboxylase beta chain" evidence="17">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5042325363" description="S-adenosylmethionine decarboxylase alpha chain" evidence="17">
        <location>
            <begin position="65"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate; via pyruvic acid" evidence="13">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for catalytic activity" evidence="13">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for processing activity" evidence="13">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for processing activity" evidence="13">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="6"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Cleavage (non-hydrolytic); by autolysis" evidence="16">
        <location>
            <begin position="64"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser); by autocatalysis" evidence="15">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR001355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR001355-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR001355-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR001355-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR001355-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR001355-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW26187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="347" mass="38860" checksum="C80A5E9D2C207DF9" modified="2014-02-19" version="1">MAVSGFEGFEKRLELHFFGDDPAIFPLGLRKLEFESLEQVLEAVQCTVVSAVGNSYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSILPLIQYAHHLGLALCSCRYTRGSFIFPKSQPFPHTSFKDEVTYLQDTIPSNLCFRKASIMPSKSSSHSWHVFTANDTTHTLPHMPYVHDNELLFTMEICMTELDPILARKFFRPSEDGKPGDSAGKEMTELTGINEINPEALICDFAFDPCGYSMNGMDGDWYSTIHVTPEDGFSYASFECVSSVNDNIAHVLRKVVKIFRPGTMSISTTWNGFGNDIWRQMASAVEPLGMKCRSFAMDQFPAAGTVVFQTFTARRKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7Y5</accession>
    <name>V7C7Y5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G105400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7Y5"/>
    <dbReference type="SMR" id="V7C7Y5"/>
    <dbReference type="Gramene" id="ESW26277">
        <property type="protein sequence ID" value="ESW26277"/>
        <property type="gene ID" value="PHAVU_003G105400g"/>
    </dbReference>
    <dbReference type="OMA" id="ERHNGQF"/>
    <dbReference type="OrthoDB" id="849214at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="80" mass="9207" checksum="B03E33D0847D3E30" modified="2014-02-19" version="1">MVTVLIKPTHLKLRMSKLEDAMAKLVVNQENSMTTIRNIEIQKGQMAKQLAERHNGQFSVNYQSNPKEHCNNVVTEKKNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7C811</accession>
    <name>V7C811_PHAVU</name>
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            <fullName evidence="6">TF-B3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G033400g</name>
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    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
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        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
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        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C811"/>
    <dbReference type="SMR" id="V7C811"/>
    <dbReference type="STRING" id="3885.V7C811"/>
    <dbReference type="Gramene" id="ESW25410">
        <property type="protein sequence ID" value="ESW25410"/>
        <property type="gene ID" value="PHAVU_003G033400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S27N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRIWQVE"/>
    <dbReference type="OrthoDB" id="1688597at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10017">
        <property type="entry name" value="B3_DNA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.330.10">
        <property type="entry name" value="DNA-binding pseudobarrel domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003340">
        <property type="entry name" value="B3_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015300">
        <property type="entry name" value="DNA-bd_pseudobarrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050655">
        <property type="entry name" value="Plant_B3_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31920">
        <property type="entry name" value="B3 DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31920:SF108">
        <property type="entry name" value="B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02362">
        <property type="entry name" value="B3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01019">
        <property type="entry name" value="B3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101936">
        <property type="entry name" value="DNA-binding pseudobarrel domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50863">
        <property type="entry name" value="B3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TF-B3" evidence="6">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="TF-B3" evidence="6">
        <location>
            <begin position="221"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="TF-B3" evidence="6">
        <location>
            <begin position="353"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="451" mass="52303" checksum="E49F12A7E31D4F20" modified="2014-02-19" version="1" fragment="single">HFCKIILRPNLAHGILNLPKMFTRKHGDGMSNPVFLRSPDGTEWKIYWVRSDGEIWFQNGWKEFATYYSLDHGHLLFFEYQGTTHFQVHIFDNSALEIDYPSHTTHCRKENLVHISDDSNELLLEQLSCQNTRVKPTLSSPQPCKKMKNSITTNVVRSPNLVHLHQHVQTKSPSIQEEKSIKQKLHEVEGKHAFNSECSKVEQLTSTALKKAITFRPEHPFFLLVMKESLIKRYYLKIPPHFVEKYLKNTREVVNLEVLDGRTWPVIYSAPRISGGWKKFASENNLNVGDVCVFEMIKRIQGLAFIVSIFRGAEEPSFPISQVKDFQLESDFKSKILTRAHKEASKFKSENPFFMVTLPSKENTTRYLCVPIYFARKYLIKFNQNVMMIQFRNKLWPVKFVCNSSSSAKFSAGWALFARENNLKPGDICVFELVNRKDATLVVHVFRSHGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9Z3</accession>
    <name>V7C9Z3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAD(+) diphosphatase</fullName>
            <ecNumber evidence="2">3.6.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G162700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="3.6.1.22" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9Z3"/>
    <dbReference type="STRING" id="3885.V7C9Z3"/>
    <dbReference type="Gramene" id="ESW26974">
        <property type="protein sequence ID" value="ESW26974"/>
        <property type="gene ID" value="PHAVU_003G162700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3084">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENDAVYW"/>
    <dbReference type="OrthoDB" id="10249612at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035529">
        <property type="term" value="F:NADH pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019677">
        <property type="term" value="P:NAD+ catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006742">
        <property type="term" value="P:NADP+ catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03429">
        <property type="entry name" value="NUDIX_NADH_pyrophosphatase_Nudt13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.79.10:FF:000040">
        <property type="entry name" value="Nudix hydrolase 19, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050241">
        <property type="entry name" value="NAD-cap_RNA_hydrolase_NudC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015375">
        <property type="entry name" value="NADH_PPase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049734">
        <property type="entry name" value="NudC-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015376">
        <property type="entry name" value="Znr_NADH_PPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42904:SF4">
        <property type="entry name" value="NAD(+) DIPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42904">
        <property type="entry name" value="NUDIX HYDROLASE, NUDC SUBFAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09296">
        <property type="entry name" value="NUDIX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09297">
        <property type="entry name" value="Zn_ribbon_NUD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="7">
        <location>
            <begin position="202"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="390" mass="43349" checksum="AB87CC34AD8583BD" modified="2014-02-19" version="1">MSINVHSHAFAGNPLLSKFSLSGHPLPPSSALEALNVRIGQPNTHSYPSLSFKVLPFRNGRPLASSETSSGDSPPIWHLGWLGLDDLRVIYDNSGAQLSVDSLVYLNSSAEDDAVYWAIDVSAEAIELGSKTGLRFVELRTLMVATDWSDLQAMGNLAIAGHAKALLEWHNISRFCGHCGEKTVPMEAGRRKQCSNGSCKKRYTHVVIMLVIDRENDRALLAKRPMRLHRLYTCLSGFTEPGESLEEAVRRETWEETRVEVGEVVYHSSQPWPVGPSGIPCQLMVGFFAYAKSLEITVDKKELEDAQWYSREDVRKALTFAKYKETQRTAAEKVEQICKGLEENRSLASDFNVESAGENAPIVFPGPFAIAHHLISSWAFSDKNVVHHSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAI8</accession>
    <name>V7CAI8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Senescence regulator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G078300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the senescence regulator S40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAI8"/>
    <dbReference type="STRING" id="3885.V7CAI8"/>
    <dbReference type="Gramene" id="ESW25936">
        <property type="protein sequence ID" value="ESW25936"/>
        <property type="gene ID" value="PHAVU_003G078300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXVW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QYRGHEN"/>
    <dbReference type="OrthoDB" id="1917735at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010150">
        <property type="term" value="P:leaf senescence"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007608">
        <property type="entry name" value="Senescence_reg_S40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46525">
        <property type="entry name" value="EMB|CAB72159.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46525:SF18">
        <property type="entry name" value="SENESCENCE REGULATOR S40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04520">
        <property type="entry name" value="Senescence_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="13"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="79"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00034773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW25936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="225" mass="25294" checksum="4539129E27880772" modified="2014-02-19" version="1">MFCFAYAKAKAGSKEEQEEAQMAKGRKFPTTARSERFLGTTYSSQGSAAVEPSEFREEDVWSTPEDREGDFKASPGQWEPREWPRRRNSREQQVHRHVGGLSLAFENPNGSGGGGATRIVHHQYRAQHDTVSSSPRGRHHQMATSAPVNVPDWSKILRADSVESLHEMDVAFDDNDSEMVPPHEYLARSRQMAANSVFEGVGRTLKGRDMRRVRDAVWSQTGFDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAZ6</accession>
    <name>V7CAZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G190600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAZ6"/>
    <dbReference type="Gramene" id="ESW27309">
        <property type="protein sequence ID" value="ESW27309"/>
        <property type="gene ID" value="PHAVU_003G190600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYAECGC"/>
    <dbReference type="OrthoDB" id="2122657at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000934">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002100">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000454">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g47530"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF411">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="200"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="318"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="534"/>
            <end position="626"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW27309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="626" mass="69709" checksum="FFD201062C7A67E4" modified="2014-02-19" version="1">MEEEWVVSVLRKCSNLKQTKQIHGHILKSGLRTDPFVFGKLLLHCAVSISDALHYSLRLFHHFPNPDTFMHNTLIRGLSLSQTPLLSLHPFIQLRRQPSLSPDSFSFAFVLKGVANSRQLRPGIQLHSQALHHGFDTHIFVGTTLISMYAECGDSVSARRVFDKMSEPNVVAWNAAVTASFRCGDVEGAGDVFGRMPLRNLTSWNVMLAGYAKAGELGLARRVFCDMPLRDEVSWSTMIIGELLREGIGTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLCVGSVNNALIDTYSKCGNVAMARLVFQNMPGARSIVSWTAIIAGLAMHGYGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGYVFFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIELAELVKARLAEMDPGNSGDHVLLSNVYAVAGKWKDVASIRRTMTEHSMKKTPGRSMIEIDKAIYCFVAGEKPNEVTKEAHEKLREIMLRLRAEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKIYRVEIIVRDRSRFHSFKDGFCSCRDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB24</accession>
    <name>V7CB24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Calmodulin-binding protein 60 A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G197500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant ACBP60 protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB24"/>
    <dbReference type="STRING" id="3885.V7CB24"/>
    <dbReference type="Gramene" id="ESW27387">
        <property type="protein sequence ID" value="ESW27387"/>
        <property type="gene ID" value="PHAVU_003G197500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRWC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HARTCVI"/>
    <dbReference type="OrthoDB" id="1604062at2759"/>
    <dbReference type="PhylomeDB" id="V7CB24"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080142">
        <property type="term" value="P:regulation of salicylic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046829">
        <property type="entry name" value="Calmod_bind_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046830">
        <property type="entry name" value="Calmod_bind_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046831">
        <property type="entry name" value="Calmodulin_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012416">
        <property type="entry name" value="CBP60"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31713:SF14">
        <property type="entry name" value="CALMODULIN-BINDING PROTEIN 60 A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31713">
        <property type="entry name" value="OS02G0177800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20452">
        <property type="entry name" value="Calmod_bind_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20451">
        <property type="entry name" value="Calmod_bind_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07887">
        <property type="entry name" value="Calmodulin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Calmodulin binding protein-like N-terminal" evidence="9">
        <location>
            <begin position="83"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Calmodulin binding protein central" evidence="10">
        <location>
            <begin position="241"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Calmodulin binding protein C-terminal" evidence="11">
        <location>
            <begin position="312"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="382"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="384"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF20451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF20452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW27387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="546" mass="61270" checksum="C5C57768DD747145" modified="2014-02-19" version="1">MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSVKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMMGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTIATALKQGEKYATFEDEDSLMDGSSHLTNVLHSPSSPKTEGSSANKLLGPQKTGGFNYPQASASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLRYDQTLSFPVQVSNSLICDTDSIAHAFSDEDHLKFFDTDLQSHVEADLQSAVDSFMHARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE42</accession>
    <name>V7CE42_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G283700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE42"/>
    <dbReference type="STRING" id="3885.V7CE42"/>
    <dbReference type="Gramene" id="ESW28404">
        <property type="protein sequence ID" value="ESW28404"/>
        <property type="gene ID" value="PHAVU_003G283700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY47">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IWSKPFP"/>
    <dbReference type="OrthoDB" id="2018352at2759"/>
    <dbReference type="PhylomeDB" id="V7CE42"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35998">
        <property type="entry name" value="OS02G0127900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35998:SF1">
        <property type="entry name" value="OS02G0127900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW28404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="195" mass="22626" checksum="759405FE1EE5AE67" modified="2014-02-19" version="1">MVLWEITLAAAYVLGLKRTYRLALRTQRRILAPKIRQFLHRRTRAVFNVALKVNQTIQERDMTFGRNVGNYILQRLNRMKPLAQIQGGSLSNSAPHPSSRLTKLAAKFSNSKTSSYYQLFKRKSGKQNTWFQQKVIWSKPFPSIVKMMRPPSLAGTTTQCRHLNSNASDAFSPNYRVNWPGDVIRKDIMQWMLRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF55</accession>
    <name>V7CF55_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G242500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF55"/>
    <dbReference type="Gramene" id="ESW27905">
        <property type="protein sequence ID" value="ESW27905"/>
        <property type="gene ID" value="PHAVU_003G242500g"/>
    </dbReference>
    <dbReference type="OMA" id="ARHEQHI"/>
    <dbReference type="OrthoDB" id="1420639at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004252">
        <property type="entry name" value="Probable_transposase_24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03004">
        <property type="entry name" value="Transposase_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="493"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="493"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="530"/>
            <end position="541"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="549" mass="60518" checksum="8AB1DCC79A1B6DC0" modified="2014-02-19" version="1">MNPQGESSGTSPHLSIELLEKLLPSFLLAAENRQRASKELPLFPIPTVHETLNVGFGSNISLSSSHAGASQNPSSYVDLTLRLGPPNPGAIRPTAMSSSNIFAPRHAVGMQGMHGSTKRGFPGHAFGDLHVGNMGQLALLAKRRATESHITAINNVNPSPPLSQMQQLFRNTPPANPIQALTVGQGGLKGKAIESSSSSSHFRHMGVPSQAYIQERLQYRPIGSSPSPHNLTHGPLPVAAMMQNLCPISFEQRLDNENIKNAQNDSEEEEEEEIPDQEDQGGDVLLAQDEQMAEDPVDDEGKYIIEPIGKGWNPAQRAVDGINYVIQSQFRGVFHSYGMIPSADREEWFRVFKEKCTWEARHEQHIRKKFDSYCSKHLAEILTQVRNTSKKPQWMKVEDWNELRAYWDTPSFKNISARNKANRTSNKGSRTVHTGGCEAFTDVAKNLAKKSGPDSYPDEFFLATNKYKSTGNWVDSSAQKTYEEYQRRLLQQQSQVGEASSSVTQNTWSEVAKGKSSGHVQPKATSLTQESGSPPSSSEGSEGIDKAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGT6</accession>
    <name>V7CGT6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">UV radiation resistance-associated gene protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G290900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGT6"/>
    <dbReference type="SMR" id="V7CGT6"/>
    <dbReference type="STRING" id="3885.V7CGT6"/>
    <dbReference type="Gramene" id="ESW28490">
        <property type="protein sequence ID" value="ESW28490"/>
        <property type="gene ID" value="PHAVU_003G290900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2896">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RFKPANQ"/>
    <dbReference type="OrthoDB" id="72772at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000323">
        <property type="term" value="C:lytic vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000149">
        <property type="term" value="F:SNARE binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035493">
        <property type="term" value="P:SNARE complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15157">
        <property type="entry name" value="UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15157:SF24">
        <property type="entry name" value="VACUOLAR PROTEIN SORTING 38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="62"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="352" mass="39256" checksum="A7CC8EC5309BE6FA" modified="2014-02-19" version="1">MEPNQILSLRTTTTDPQHVKVIQWEDFQHDLARLASLSSALAQANQKRSILYNKLDSLIQGNSESLGRLNELEEMREKLESKKMVMEKMSIRSRLAKEDTSKQEEQLTGEVQSLLVAGGALSGSSRNLQESSIQLLSDENGYVHLRKLQKMLRRRQQHMISQISMLYPVKILVGPSQEQELEAYPSGNLAGTSAGLKPVNQGALTIHGLHLNVLSFRKMSFFTDKKEIQGSATALGYVAHAVTLIASYLQVPLRYPVRLGASHSYIVDNAPSTELTSEASSNANTNTHVEFPLFLEGQDTTRAAYAVFLLNKDLEQLLNYIDAKSLGPRHVLDNLRELLRIIQSSAFIDSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGT9</accession>
    <name>V7CGT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">MSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G062400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGT9"/>
    <dbReference type="SMR" id="V7CGT9"/>
    <dbReference type="Gramene" id="ESW29339">
        <property type="protein sequence ID" value="ESW29339"/>
        <property type="gene ID" value="PHAVU_002G062400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0439">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RHDGPEK"/>
    <dbReference type="OrthoDB" id="264603at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090158">
        <property type="term" value="P:endoplasmic reticulum membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061817">
        <property type="term" value="P:endoplasmic reticulum-plasma membrane tethering"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.10:FF:000813">
        <property type="entry name" value="Vesicle-associated protein 1-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000535">
        <property type="entry name" value="MSP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008962">
        <property type="entry name" value="PapD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016763">
        <property type="entry name" value="VAP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10809:SF6">
        <property type="entry name" value="AT11025P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10809">
        <property type="entry name" value="VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00635">
        <property type="entry name" value="Motile_Sperm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019693">
        <property type="entry name" value="VAMP-associated"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49354">
        <property type="entry name" value="PapD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50202">
        <property type="entry name" value="MSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="218"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="MSP" evidence="9">
        <location>
            <begin position="6"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="127"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="177"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="141"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="241" mass="26416" checksum="BD8E4156DFA11077" modified="2014-02-19" version="1">MSTGDLLSIEPLELKFFFELKKQISCSLILSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNISGADSAAVTRAFAERHDGPEKSAEAKALISRLNEEKNNAIQQINKLRQELDTLRRESNKSRGGVSMVIVILIGLLGIIMGYLMKKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHV5</accession>
    <name>V7CHV5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">50S ribosomal protein L20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G090500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the bacterial ribosomal protein bL20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHV5"/>
    <dbReference type="STRING" id="3885.V7CHV5"/>
    <dbReference type="Gramene" id="ESW29689">
        <property type="protein sequence ID" value="ESW29689"/>
        <property type="gene ID" value="PHAVU_002G090500g"/>
    </dbReference>
    <dbReference type="OMA" id="SNFRRAH"/>
    <dbReference type="OrthoDB" id="1420244at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07026">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1900.20:FF:000001">
        <property type="entry name" value="50S ribosomal protein L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1900.20">
        <property type="entry name" value="Ribosomal protein L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00382">
        <property type="entry name" value="Ribosomal_bL20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005813">
        <property type="entry name" value="Ribosomal_bL20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049946">
        <property type="entry name" value="RIBOSOMAL_L20_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035566">
        <property type="entry name" value="Ribosomal_protein_bL20_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01032">
        <property type="entry name" value="rplT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10986">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00453">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00062">
        <property type="entry name" value="RIBOSOMALL20"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74731">
        <property type="entry name" value="Ribosomal protein L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00937">
        <property type="entry name" value="RIBOSOMAL_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="116" mass="13759" checksum="98487B311F73D66B" modified="2014-02-19" version="1" fragment="single">MTRIKRGYIARKRRTKIRLFVSSFRGAHSRLTRTITQQKMKALVSAHRDRDRKKRDFRGLWISRINAVIRGNPKVSYIYSNLIHSLYTRQLLLNRKIVAQIAILKENCLFPTSFTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJC2</accession>
    <name>V7CJC2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G133900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJC2"/>
    <dbReference type="Gramene" id="ESW30209">
        <property type="protein sequence ID" value="ESW30209"/>
        <property type="gene ID" value="PHAVU_002G133900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SBX0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RKTWMNH"/>
    <dbReference type="OrthoDB" id="1696886at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756216" evidence="2">
        <location>
            <begin position="34"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="56"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9815" checksum="281A327DEF998EB6" modified="2014-02-19" version="1" fragment="single">SSNTTQHKSKMVHQVTCFILFLLLATSLVSVHSRNTLTPEDHAQEQHKIWHRKTWMNHGSHRGPKKHLLNPTIQHPFQPRELPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJX0</accession>
    <name>V7CJX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">[Histone H3]-trimethyl-L-lysine(4) demethylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G157500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CJX0"/>
    <dbReference type="STRING" id="3885.V7CJX0"/>
    <dbReference type="Gramene" id="ESW30492">
        <property type="protein sequence ID" value="ESW30492"/>
        <property type="gene ID" value="PHAVU_002G157500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWAGHEM"/>
    <dbReference type="OrthoDB" id="1678912at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032452">
        <property type="term" value="F:histone demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd16100">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15543">
        <property type="entry name" value="PHD_RSF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.650:FF:000078">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.650:FF:000042">
        <property type="entry name" value="Transcription factor jumonji (JmjC) domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001606">
        <property type="entry name" value="ARID_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036431">
        <property type="entry name" value="ARID_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003349">
        <property type="entry name" value="JmjN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013637">
        <property type="entry name" value="Lys_sp_deMease-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004198">
        <property type="entry name" value="Znf_C5HC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694:SF133">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE JMJ17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01388">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02373">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02375">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08429">
        <property type="entry name" value="PLU-1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02928">
        <property type="entry name" value="zf-C5HC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01014">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00501">
        <property type="entry name" value="BRIGHT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00545">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46774">
        <property type="entry name" value="ARID-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51011">
        <property type="entry name" value="ARID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51183">
        <property type="entry name" value="JMJN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="JmjN" evidence="11">
        <location>
            <begin position="28"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="ARID" evidence="10">
        <location>
            <begin position="95"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="9">
        <location>
            <begin position="241"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="JmjC" evidence="12">
        <location>
            <begin position="381"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1751"/>
            <end position="1779"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1751"/>
            <end position="1760"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW30492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1826" mass="208305" checksum="E785D61A8519BF8A" modified="2014-02-19" version="1">MGKGKPRAVEKGVVGPSFSVASSSIPAGPVYYPTEDEFKDPLEYIYKIRPEAEPYGICKIVPPKSWKPPFALDLHSFTFPTKTQAIHKLQARPASCDSKTFDLDYSRFLKDHSSKKSRKRVVFEGAELDLCKLFNAVKRYGGYDKVVDGKKWGDVARFVRSSGKITDCAKHVLCQLYREHLYDYENFYNQMNQGTEKSCKKSLYEEQKSDCGAKPLVSKRVHKSVDCSKPKDGKVQGEEHDQICEQCKSGLHGELMLLCDRCDKGWHTYCLSPPLKQIPLGNWYCFNCLNSDGDSFGFVPGKHYSLEAFRRKADMSRRRWFGSGPVSRVQIEKKFWDIVEGLVGEVDVMYGNDLDTSVYGSGFPRVADQKPESIDDKLWEEYSANPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEAKCWYSVPGSQVSAFEKVMRNSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSTLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPHGAFGADLYQRYHKTAVLSHEELLCVVAQYGEVDGRVSSYLKNELLRISVKEKSRREKLWKHGIIKSSRMAPRKCPQFVGTEEDPACIICQQYLYLSAVVCGCRPSAFVCLEHWEHLCECKTVKLRLLYRHSLAELYDFAYSMDKYTSEDKAECRSMKKQPSCLSALTKKVKGSSITFAQLATEWLLQSSTILQNVFLQDAFVTALRKAEQFLWAGSEMDSVRDMVRNLLQAQEWAEGIRDCVTKIELWLCHRDSSVKKVHLEFVDELLKFSPVPCNEPCYHKLKEYAEETRLFVQEFDTALSMCLNMSELELLYSKACGLPLYVKGNKKLEGKISSTKAWLDSVRKCLSARQPATLHVDVLYKLKAEFLDLQVQLPEINLLQNLLNQAESCSAQCHDMLEGPMNLKNVGLLLKEWENFAVDVPELKLLRQYHLDTVSWVSHFNDVLGRVHMQEDQHNAVDELNSIFEAGLSLKIQVDELPLVEIELKKANCREKAVKAHDFKMPLEFIQQLLKEATMLQIEGEKQFVNLSCMLTVAIPWEERAKEMLSHEASISDFEGMIRASENIFVILPSLNDVKDALSGANSWLKNSKPYFVSSMRASDSSQNVEDLQMLVSQSKHLKVSFKERGMLELVLKNCRTWEHEACSVLNDAQCLFELENSLHEIDSGLMCKVEDLIVRIQSTTESGISLGFDFNEISKLQASSSTLQWCKRALSFSNCSPSLEDVLEVAEGLSHSSVSGALLKLLIGGLEWLRKALEAISRPCNSRRRKLTDVQAILTDYKTINMTFTAVNIQLEEAIGKHKLWQEQVCQFFGLSLRERSWSSILQLKEYGDTIAFSCSELDLVLSEVKKVENWKSTCMDKLGTLFQDENLLLHALEKMKQTLDRSIFMYDKLQNLKEPNLCICCFDDSEDQEFLTCSTCMDCYHLQCVGLTEKDVAVENYQCPYCEILRGEFCYHNGGALLRFEKKRVELKVLTELMSDAENFCLWIDERDVLSELVEKALSCKSFLKEIVILASANVGQDICVISEKLATAVKACNVAVVYDQNDICDLELTLAKNSWKVQVNRLLNGVPKPTIQHIQKHLKEGLAMGISPEDHYMLKITQVNTLGLQWAELAKKVASDSGALSLDKVLELVVEGEKLPVDANEELRMLRARCMLYCICRKPFDPERMIACCHCNEWYHFDCMKLPCTREVYICPACTPCTEGLLPNHDRLTSGKFEEPKTPSPRHSNPRKKQKRDVPNLTCDQDSECRYPSGIECLRWQNRKPFRRAAKKRIELRSLSPFLCIQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKE4</accession>
    <name>V7CKE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G102100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the band 7/mec-2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKE4"/>
    <dbReference type="STRING" id="3885.V7CKE4"/>
    <dbReference type="Gramene" id="ESW29828">
        <property type="protein sequence ID" value="ESW29828"/>
        <property type="gene ID" value="PHAVU_002G102100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2962">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIMIPIL"/>
    <dbReference type="OrthoDB" id="77368at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015485">
        <property type="term" value="F:cholesterol binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031625">
        <property type="term" value="F:ubiquitin protein ligase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032933">
        <property type="term" value="P:SREBP signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03406">
        <property type="entry name" value="SPFH_like_u3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="entry name" value="Band 7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033294">
        <property type="entry name" value="Erlin1/2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15351:SF3">
        <property type="entry name" value="ERLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15351">
        <property type="entry name" value="ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="Band 7/SPFH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="Band 7" evidence="10">
        <location>
            <begin position="50"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW29828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="40817" checksum="4A11F23F5E85261D" modified="2014-02-19" version="1">MDSQHRTVASPPSSQGRDSIAILFTFLSFFAVVALVFVPAASPSFQNTLSILHQVPEGHVGVYWRGGALLKTITEPGFHLKMPFLTQYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLHKEFVFETLLNYGVGYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPNSIRRNFEQMEEERTKVLIAIEKQKVAEKEAETMKKMAISEAEKNANVSKILMEQKLLEKDSTRRQEEIENAMYLAREKSQADADFYRVIKEAEANTLKLTPEFLHLKFIEAIANNTKIFFGDKVPNMILDQRLLGNLLHEVSTGTTTIGKSDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL31</accession>
    <name>V7CL31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Remorin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G186400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the remorin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL31"/>
    <dbReference type="SMR" id="V7CL31"/>
    <dbReference type="STRING" id="3885.V7CL31"/>
    <dbReference type="Gramene" id="ESW30834">
        <property type="protein sequence ID" value="ESW30834"/>
        <property type="gene ID" value="PHAVU_002G186400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTYR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANWATPD"/>
    <dbReference type="OrthoDB" id="1900877at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005516">
        <property type="entry name" value="Remorin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31471">
        <property type="entry name" value="OS02G0116800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31471:SF1">
        <property type="entry name" value="OS12G0613600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03763">
        <property type="entry name" value="Remorin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Remorin C-terminal" evidence="3">
        <location>
            <begin position="391"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="130"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="281"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="462"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="160"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="285"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="300"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="318"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW30834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="506" mass="55996" checksum="8D5F6BD0AE1113BE" modified="2014-02-19" version="1">MVYERIQKPQSGGGFSPGKLRNMLLGVEKKRKEEEELDSTFTRSQNSDMDESGGSSSDHCKDVDVVSVLPEYSTSALARTSSIEAVGDDRFVKANAAVTSRNRILEDPSTDYDSGHDNVSMSSSVFEFQKAERPTQRVPVRPFSKPAPSKWDDAQKWIASPTSNRPKTAQAQGQGGHVGSRKVGSHGFVSRQPSMKVVVEVPDQREIALDEPDTKQIDTNQTKMESGGQKFVSWEADPYAIASSCVSLSQHNSSLAIQNATTFIPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRSSPASTLTDLHSDNLNLNNNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAELPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMKKIEVEVERIRSKAHDKLMNKLAGARHKAEEKRAAAEANKNHEAAKTEEQAEYIRKTGHVPSSYLSFSCCSWCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL52</accession>
    <name>V7CL52_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_002G123200g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL52"/>
    <dbReference type="SMR" id="V7CL52"/>
    <dbReference type="Gramene" id="ESW30083">
        <property type="protein sequence ID" value="ESW30083"/>
        <property type="gene ID" value="PHAVU_002G123200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPYS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RIIGNET"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000432">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase EFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000288">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase EFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000358">
        <property type="entry name" value="Putative leucine-rich repeat receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051420">
        <property type="entry name" value="Ser_Thr_Kinases_DiverseReg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005">
        <property type="entry name" value="LEUCINE RICH REPEAT KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005:SF88">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 22" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="19" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="17 23" id="KW-0472">Membrane</keyword>
    <keyword evidence="13 22" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-0675">Receptor</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 23" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="16 23" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="23">
        <location>
            <begin position="651"/>
            <end position="673"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="24">
        <location>
            <begin position="707"/>
            <end position="1014"/>
        </location>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="737"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW30083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1021" mass="112186" checksum="D21B6ED57487ED58" modified="2014-02-19" version="1">MKHFSLLLLGFGSICVQLFSLFTLSSLSVAFALGNETDHLALLQFKKSITRDPYGVLLSWNTSTHFCNWPGITCNLKLQRVTQLVLLRYMLGGSISPHIGNLSYMINFNLAINNIHGEIPQELGRLSRLQQLSVSNNLLVGEIPTNLTGCTHLRFLYLQRNNLTGKIPIEVGSLAKLESLGVSTNKLTGEIPSFIGNLTSLTVLGVGSNNFEGHIPQEICRLKNLTFAAFGVNKFTGTLPSCLYNMSSLTMISVTENQLTGHLPPNMFHTLPNLQELYIGGNQISGPIPPSITNATIYFLALEASRNSLTGQIPSMGNFQYLDVLSLSWNHLGDNSTNDFDFLDSLANCSRLQLFSISYNNFGGHLPDSVGNLSSKLSQLYLGGNQISGRIPATIGNLVNLTLLTMENNSLGGNIPTTFGKFQRLQKLNLGANKLSGELRTIGNLTQLFHLELAYNLFEGNIPQSIGNCQRLQYLDLSHNNFTGTIPSDLFKLSSLTKLLDLSLNSLSGSVPEEVGSLKNLGSLDMSENQMSGEIPPTMGECIMLEYLYLQGNSLQGIIPSSLASLKGLLRLDLSRNQLSGSIPNTLQSISSLQYFNVSFNKLEGEVPTFGNASAILVMGNNKLCGGTSELHLPTCPVKGKKLAKHHKFRLIAVIVSVITFLLILSITLTIYWTRKRSKKTSLDSPANDDQSATVSYQSLHNGTDGFLATNLIGSGNFSSVYKGTLEELDEKVVAIKVLNLQKKGAHKSFISECNALRNIKHRNLIQVLTCCSSIDYKGQEFKALIFPYMTNGSLEQWLHPKTLSEEDPRKLSLDQRLNIMVDVASALHYLHHECEQPIIHCDLKPSNVLLDNEMVAHVSDFGISKLLSAINDNTSKQTSTIGIKGTLGYVPPEYGVTSEVSTYGDIYSFGILMLEMLTGKSPTDESFEDGQNLHNFVLTSFSDNLLQILDPLLIPTDESPPLKGNNWNLDPNVEMCSVSLFRIGLACSMKSPKDRMNIAHVTRELNRIREVFLVGVDDSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLA0</accession>
    <name>V7CLA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15 16">Histidinol dehydrogenase, chloroplastic</fullName>
            <shortName evidence="16">HDH</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_002G198300g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 16">Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 16">
            <text>L-histidinol + 2 NAD(+) + H2O = L-histidine + 2 NADH + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:20641"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:57699"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="20">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="20">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 9/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 16">Plastid</location>
            <location evidence="2 16">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 16 21">Belongs to the histidinol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLA0"/>
    <dbReference type="SMR" id="V7CLA0"/>
    <dbReference type="STRING" id="3885.V7CLA0"/>
    <dbReference type="Gramene" id="ESW30977">
        <property type="protein sequence ID" value="ESW30977"/>
        <property type="gene ID" value="PHAVU_002G198300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2697">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAIPRHV"/>
    <dbReference type="OrthoDB" id="1703565at2759"/>
    <dbReference type="PhylomeDB" id="V7CLA0"/>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004399">
        <property type="term" value="F:histidinol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:L-histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06572">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.1300:FF:000002">
        <property type="entry name" value="Histidinol dehydrogenase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1980:FF:000011">
        <property type="entry name" value="Histidinol dehydrogenase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1980:FF:000019">
        <property type="entry name" value="Histidinol dehydrogenase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1980">
        <property type="entry name" value="Nitrogenase molybdenum iron protein domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01024">
        <property type="entry name" value="HisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001692">
        <property type="entry name" value="Histidinol_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022695">
        <property type="entry name" value="Histidinol_DH_monofunct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012131">
        <property type="entry name" value="Hstdl_DH"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00069">
        <property type="entry name" value="hisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21256:SF2">
        <property type="entry name" value="HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21256">
        <property type="entry name" value="HISTIDINOL DEHYDROGENASE HDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00815">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000099">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00083">
        <property type="entry name" value="HOLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="ALDH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00611">
        <property type="entry name" value="HISOL_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 16" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="13 16" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="8 20" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 16 18" id="KW-0520">NAD</keyword>
    <keyword evidence="11 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 16" id="KW-0934">Plastid</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="9 20" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="17">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="17">
        <location>
            <position position="326"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="359"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="359"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="418"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="418"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00049489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00069347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRNR" id="PIRNR000099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="RuleBase" id="RU004175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW30977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="436" mass="47189" checksum="8645FBB2FC1D7582" modified="2014-02-19" version="1">MKSYRLSELGGAELRSLIARPRIDFSSVFSVVNPILDHVRQRGDDAVREYTLRFDKVQLDNIVQLVSDLPDPLLDVHVKEAFDIAYSNIYAFHAAQRTPETNVENIKGVQCRRVSRSISTVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPAQDGTICKEVVYCAKKAGVTHILKAGGAQAISAMAWGTNTCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKHAIPRHVAADLLSQAEHGPDSQVVLVIAGEGVDLNAIEQELSKQCKSLPRGEFAAKALTHSFIVFAHDMLESINFSNLYAPEHLIVNVKDAEKWEGFIQNAGSVFLGPWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYITVQSLTEEGLRKLGPYVATMAEVEGLDAHKLAVTLRLEDIEGRQVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMU7</accession>
    <name>V7CMU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G240900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMU7"/>
    <dbReference type="SMR" id="V7CMU7"/>
    <dbReference type="STRING" id="3885.V7CMU7"/>
    <dbReference type="Gramene" id="ESW31474">
        <property type="protein sequence ID" value="ESW31474"/>
        <property type="gene ID" value="PHAVU_002G240900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR9A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GNSKLMV"/>
    <dbReference type="OrthoDB" id="773436at2759"/>
    <dbReference type="PhylomeDB" id="V7CMU7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000004">
        <property type="entry name" value="WRKY transcription factor 65"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32096">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32096:SF137">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 65 ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="7">
        <location>
            <begin position="75"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="128"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="257" mass="28753" checksum="676B2F4E99811A0E" modified="2014-02-19" version="1">MDTKLTNNNRQDSDPPQENIADSPPSSSLFNIDAVVTSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPASRNNTRPTKKPEPEPVTDPVEPEPEPEEKFAELGGDESMITTADEMGWLGEMETTTSTVLESPIMSAAYHADVESALLPMREEDELLFADLGELPECSVMFRQGLLEERRRYTAPWCGTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNS0</accession>
    <name>V7CNS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_002G190900g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Plastid</location>
            <location evidence="18">Chloroplast thylakoid membrane</location>
            <topology evidence="18">Single-pass membrane protein</topology>
            <orientation evidence="18">Stromal side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the AAA ATPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNS0"/>
    <dbReference type="SMR" id="V7CNS0"/>
    <dbReference type="STRING" id="3885.V7CNS0"/>
    <dbReference type="MEROPS" id="M41.005"/>
    <dbReference type="Gramene" id="ESW30890">
        <property type="protein sequence ID" value="ESW30890"/>
        <property type="gene ID" value="PHAVU_002G190900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0731">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFFMRAQ"/>
    <dbReference type="OrthoDB" id="1413014at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010304">
        <property type="term" value="P:PSII associated light-harvesting complex II catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd19501">
        <property type="entry name" value="RecA-like_FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000001">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000001">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.760:FF:000035">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FTSH 6 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.720.210:FF:000002">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FTSH chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.720.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01458">
        <property type="entry name" value="FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005936">
        <property type="entry name" value="FtsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011546">
        <property type="entry name" value="Pept_M41_FtsH_extracell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01241">
        <property type="entry name" value="FtsH_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF139">
        <property type="entry name" value="ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06480">
        <property type="entry name" value="FtsH_ext"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="17" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="9 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0934">Plastid</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="16" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="13" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="20">
        <location>
            <begin position="265"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00060455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW30890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="695" mass="74613" checksum="B3FD72FCD52772BE" modified="2014-02-19" version="1">MAASSACLVGNGLSTRGNRVALKKDFNGRYLYSSWRLSSLNNNKASKAFSIRASLEERQQEGRRGFLKLLLGNAGVGVPALLGSGKAYADEQGASSSRMSYSRFLEYLDKDRVKKVDLYENGTIAVVEAVSPELGNRVQRVKVQLPGLNQELLQKFREKNIDFAAHSAQEESGSLLANLIGNLAFPLLLIGGLFLLSRRSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDGDVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPSDDPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSDIGPWSLMEPSAQSGDIIMRMMARNSMSERLAEDIDAAIKRISDEAYEIALEHIRNNREAIDKIVEVLLEKETLSGDEFRAILSEFAEIPAENRVPPSTPVPATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRB9</accession>
    <name>V7CRB9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP synthase mitochondrial F1 complex assembly factor 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G005700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRB9"/>
    <dbReference type="SMR" id="V7CRB9"/>
    <dbReference type="STRING" id="3885.V7CRB9"/>
    <dbReference type="Gramene" id="ESW32649">
        <property type="protein sequence ID" value="ESW32649"/>
        <property type="gene ID" value="PHAVU_001G005700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32650">
        <property type="protein sequence ID" value="ESW32650"/>
        <property type="gene ID" value="PHAVU_001G005700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3281">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCEIKDE"/>
    <dbReference type="OrthoDB" id="16535at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033615">
        <property type="term" value="P:mitochondrial proton-transporting ATP synthase complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010591">
        <property type="entry name" value="ATP11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13126:SF0">
        <property type="entry name" value="ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13126">
        <property type="entry name" value="CHAPERONE ATP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06644">
        <property type="entry name" value="ATP11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="251" mass="29084" checksum="096CE04731E74D67" modified="2014-02-19" version="1">MQRVYTNSTIWRSIASKIRKNLFSINDHFAVRSFSAVPLAAAAAKLHQPDIPCDFQKWGSIGFCRTSKFASGFNPLQPKPLDTIVDVHRLKDRYPEDIASIWDDYHIGRGHVGATMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGLEDYKARGTQASPYFTVSFYTEFAESKDLVLIRGDIVFTSKLTDSEAEWLLETAQSFYLNDTRYKLVERFNRETRDFEFKDVLQILNMPIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRZ5</accession>
    <name>V7CRZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Spen paralogue and orthologue SPOC C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G026900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7CRZ5"/>
    <dbReference type="Gramene" id="ESW32899">
        <property type="protein sequence ID" value="ESW32899"/>
        <property type="gene ID" value="PHAVU_001G026900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWJS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYNWSLA"/>
    <dbReference type="OrthoDB" id="5577209at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd21546">
        <property type="entry name" value="SPOC_FPA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052586">
        <property type="entry name" value="ASCC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012921">
        <property type="entry name" value="SPOC_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21494">
        <property type="entry name" value="ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21494:SF2">
        <property type="entry name" value="NUCLEIC ACID BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07744">
        <property type="entry name" value="SPOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Spen paralogue and orthologue SPOC C-terminal" evidence="2">
        <location>
            <begin position="1193"/>
            <end position="1337"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="798"/>
            <end position="836"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1004"/>
            <end position="1051"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1118"/>
            <end position="1183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="801"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1013"/>
            <end position="1024"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1131"/>
            <end position="1183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1345" mass="146800" checksum="CEA84BC8A7E8654E" modified="2014-02-19" version="1">MKCVENTRDSCNCVVSQVLPSLAMASVEQPPKKRKLYEPLLEPPPSSPPSPPPPATEPTPPSPQTLPPPSQEEILAKRRNKDEIRSVFEGYKRIQRCLLNKDAPSSMADLEKSYLALITSSRGCMSVQRIVANLIPRYACHCPTALEAAAKVVINMHNFSLALISRGEDSSGIAFETARACICGLADVCCVGSSVAPTSAVIKGICSAVFQNVLTSFIALFEGKDILQMVDKSFLNMQDNPEVFSELKQKVLEEDESPLTKLSKFRVLCLLWIFFSCPKDLLAACLDLLGSATKEGTNNEGQHFLSLVTSLFDDDKTVHLLDNTISGPKSCTDSTGSGIRDDEAGEEVVTEGNYVSGGDSSVGKSCLLIRVLDRNPPLRKWMLCRCKKLLDLLPNASLEIMSVLQGILGMFPQQTDLEDCQADSDEDKSESSIYMNSRKYMVPRSSEEHESIAESSGKGGNLRVYVGSTDGFTDKVSDKYVMAHSSAVSLDNSPALKVGLHYDNGVSKPISIGVGEEGNMPNVKCSTPRDSVSHQIFSPAVRTPGNFRSNSFDGRNDFLNVEKNQVSSMNFSSPPLRSSSGSVSNSLASPNHHFMSPTASTKSQIVWCCDGDPAAMDIVSASRLLWIGYVGPDVPESHIRFHLERFGPIEKFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDVGLGTRGAMSGVAVGSSSHIFVGNIPSQWAKDEVMHETRKMIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQMRRERSNYNQHFGPAPGTGNVGIGHAYMDGARPVPAPPPPPPHLDLQVNNSAGSPHARTLPGSPADSSRTVMSHLSTLLSSLCSKYNINQNLGLNDNYMTGNNFPSMREEDMVPSSTLCITIPHCSSSMFLSDDELMAICNLAIGNAGSIVQLTQASTQMGCSWFVECSNIEGAVSALKNLRCCPGLFFQIEFSKPGHQNTVPFSVKPEMNCMELVSPRIISENHTSGMQSAPLPHSNWHFPGSREMSEVGARKPDGYDNLSQDPHQGGNVPHSHSGAHAPSIPPLQQIQSSTFVRPVYAPPNGPWDHRGINNHLHVSQLNTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIVPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPVPVQEPVNMECSEQSLQYQWQGNLCKSGVNYCKINACKADSNICRYSNAIPEPAEWTTKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDLRRFQDFVSYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU28</accession>
    <name>V7CU28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G088400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU28"/>
    <dbReference type="SMR" id="V7CU28"/>
    <dbReference type="STRING" id="3885.V7CU28"/>
    <dbReference type="Gramene" id="ESW33662">
        <property type="protein sequence ID" value="ESW33662"/>
        <property type="gene ID" value="PHAVU_001G088400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33663">
        <property type="protein sequence ID" value="ESW33663"/>
        <property type="gene ID" value="PHAVU_001G088400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0055">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWKMEMG"/>
    <dbReference type="OrthoDB" id="10255969at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009941">
        <property type="term" value="C:chloroplast envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042626">
        <property type="term" value="F:ATPase-coupled transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03225">
        <property type="entry name" value="ABC_cobalt_CbiO_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001645">
        <property type="entry name" value="ABC transporter I family member 11 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015856">
        <property type="entry name" value="ABC_transpr_CbiO/EcfA_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050095">
        <property type="entry name" value="ECF_ABC_transporter_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43553:SF1">
        <property type="entry name" value="ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43553">
        <property type="entry name" value="HEAVY METAL TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="44"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW33662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="271" mass="30195" checksum="9F242993EDA8D271" modified="2014-02-19" version="1">MTTALKPPTRLRSLQPPPLLFPGSKSFKFPTTQLPTVKCSHSSFEVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGDDGNPSQTAEPLVPERVGIVFQFPERYFVTDNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLKQEFLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUV7</accession>
    <name>V7CUV7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="5">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_001G040800g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the leguminous lectin family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the leguminous lectin family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="5"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUV7"/>
    <dbReference type="SMR" id="V7CUV7"/>
    <dbReference type="STRING" id="3885.V7CUV7"/>
    <dbReference type="Gramene" id="ESW33070">
        <property type="protein sequence ID" value="ESW33070"/>
        <property type="gene ID" value="PHAVU_001G040800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTCP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DGEYNHV"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06899">
        <property type="entry name" value="lectin_legume_LecRK_Arcelin_ConA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000522">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase IX.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000529">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase IX.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050528">
        <property type="entry name" value="L-type_Lectin-RKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000985">
        <property type="entry name" value="Lectin_LegA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019825">
        <property type="entry name" value="Lectin_legB_Mn/Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001220">
        <property type="entry name" value="Legume_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27007">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00139">
        <property type="entry name" value="Lectin_legB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00308">
        <property type="entry name" value="LECTIN_LEGUME_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00307">
        <property type="entry name" value="LECTIN_LEGUME_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0430">Lectin</keyword>
    <keyword evidence="16 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10 21" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756548" description="non-specific serine/threonine protein kinase" evidence="21">
        <location>
            <begin position="29"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="285"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="341"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="370"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW33070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="620" mass="68752" checksum="E7CF6DCD26ED4FDF" modified="2014-02-19" version="1">MLATMESLHNLKTCLLFCIFLIPTITIAQSLSFNITNFNDTQSASLVGYAGVAKSVNRTIVLNPLIDNGIGRAIYGFPLRFKNSSNGHVTDFSTRFSFTIDVSTRTNYGDGFAFFVAPLAYPIPTDSGGGNLGLYGANQNNIIAVEFDTFPNTNSDPQMKHVGINNNSVISLNSSFFDIDSNIGNMGHVLITYNASAKLLAVSWFFEGTSYGFLPNTSLSYQIDLGEILPEWVTVGFSGATGASNEENVIHSWDFTSTLNSTHLNNKENDDGNDITVRNKLPVQVVAVAVSCSILFMLVVVGVSWFIIIKKRRTDDGFGFDGAAMPRRFAYKELVAATNGFADDRRLGEGGSGQVYKGFLSDLGRVVAVKRIFSDVEDSERIFRNEVKIISGLVHRNLVQFMGWCHEQGELLLVFEYMTNGSLDTHIFGNRRSLTWGVRYNIALGMARALRYLHEEVEQCVLHRDIKSSNVLLDTDFNTKISDFGIAKLVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDMYGFGVVALEIACGRRTYEDGENNQVPLTNWVWKQYVDGNILNGADDGLKGDYDVNEMTCLLTVGIWCSHPDHRQRPKAEQVINALKQETPLPMLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVG1</accession>
    <name>V7CVG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase family 92 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G128300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVG1"/>
    <dbReference type="STRING" id="3885.V7CVG1"/>
    <dbReference type="Gramene" id="ESW34142">
        <property type="protein sequence ID" value="ESW34142"/>
        <property type="gene ID" value="PHAVU_001G128300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPZC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HWYREHI"/>
    <dbReference type="OrthoDB" id="433309at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044224">
        <property type="entry name" value="KOBITO1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46701:SF6">
        <property type="entry name" value="GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46701">
        <property type="entry name" value="GLYCOSYLTRANSFERASE-LIKE KOBITO 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="64"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="516" mass="58913" checksum="FC04FA01F9925301" modified="2014-02-19" version="1">MAGALSHRQFQHQPPPSSSRLLLLLTLLPLTLASIAFILQWRGGVTDPLTRWSPDQPQFPGMSSVDSTPSRRPSNCANPLSQSLNPSFPYFRDWNFDYSSHLSPKICVTTSTSAGLEQTLPWIFYHKVIGVSNFLLFVEGKAASPNVTRVLESIPGVKVIFRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMARDSRMDWIIHLDTDELMHPAGTPEYSLRQLLADVPGNVDMVIFPNYESSVERDDIKEPFSEVSMFKKNYDHLPKDVYFGNYKEATRGNPNYFLTYGNGKSAARIQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATEEEMLQWYRERIVWTEKALNIKLMRKGILTRIYAPMIIIQSLRESGVFGSVIAKAAQTKLSKEKFLKSVDSSNSTRNSRSDMFSSRKIDAGGLSQTTARRILKVIDESLPSAMPPLSPPSYDHADLIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVM2</accession>
    <name>V7CVM2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G129000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CVM2"/>
    <dbReference type="STRING" id="3885.V7CVM2"/>
    <dbReference type="Gramene" id="ESW34149">
        <property type="protein sequence ID" value="ESW34149"/>
        <property type="gene ID" value="PHAVU_001G129000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34150">
        <property type="protein sequence ID" value="ESW34150"/>
        <property type="gene ID" value="PHAVU_001G129000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0550">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWRWSLI"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45181">
        <property type="entry name" value="HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45181:SF8">
        <property type="entry name" value="HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="1174"/>
            <end position="1260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="485"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1134"/>
            <end position="1155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1267"/>
            <end position="1306"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="485"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="498"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="514"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="560"/>
            <end position="602"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1292"/>
            <end position="1306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1316" mass="141977" checksum="CCF767D116264D83" modified="2014-02-19" version="1">MSSSAALHFQSPINSADAPPHSSSLHFNADCLNPSASAARARSRPRLAKLRKQSASQQARSRNRAGADDDGAGAGFNPFRADQVSGNGTILESGFLNCRGDNGFVFGAGKVESDSARDLKGGIGSGGVEFVFGAGKSDEGLRKNGESVTETVCGEGGKVGSNSEGELKSGVFVFGASRNNLNSGLSTEKGKCSVGLGDSVGERECKYEFECGQRDCFGGSYSGRESSVKVEKKEPVGCGWNLDRGMGAFGVKMGMNGNSDTGADRYDHLGNGDKCKSGCGSANGIPATYGGVPVRNLSDEMEKLNIKHSEGADISKNSHANGCAAGFVFGGNDMGFGYSSVSSRTETGGQQFCAHSASGNVGVQNGTACGIASDSTGIHSTPSTSQEGFTDFQSGKIPGCYVSEDSKANGASVSFSFSSIGIDSHPNFYASTGHSSSADGDNSDNFFASTPEASKESFADFKPPTWDPSCFKENLFPKLNRKVESTQKGRSCMEKGSKCTRRKLKPHSLNKKQTGPDHLSKEDSSLKTPDSSGVHSPMDFSPYQETTASAQDVKASKGLNDLHSKIPTDYKDGNLPTMRREDTSTTDRRHGDLDSNKLDENLSVHSSGPEMVWPNLKTEQFCGSSAEGASACAGVDFTSNIERQKDATFCFVPGPNESMGKDFSFASSSVVGTPSLKRQHKKKFRRKGGCNTFVISPRVNGKFVSSVQFSPHSTANMSSHSDVMDRSQINGQCKDGDVASSNTIPSSACDKWRHRGNQAHKDGDLSKAEGFYTLGINSVPTSERSGCLVQPLLLCYSNRAATRMSLGRIREALEDCVMATALDPSFPKVQMRTANCHLLLGEVENAQQCFNKCMESGSVICLDRRVIVEAADGLQKAQEVLKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLLRKYEAAIQLCEQSQHLAEKNFVLENNAANSDSSLCDSYSSVKLWRWSLISKCYFRLGRLEASLNILDQLQHVVSVTDNKSVIDNTEDSLSLASTIRELLDHKKAGNENFKKGKYTEAVENYTAALSCNIKSCPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLLEMVRDYEQAACDLKRFIAVLETQSNERDKQSDSPNGSKGVKESRQARQRLISVEDQAKKGTPLDVYVILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDDGQVWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKARKLSNRGGTSRRSSDAYGRPCDGYKSPSDRTSNRRNGRDHWKTYGHSYSQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW21</accession>
    <name>V7CW21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Prolamin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G071800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW21"/>
    <dbReference type="Gramene" id="ESW33465">
        <property type="protein sequence ID" value="ESW33465"/>
        <property type="gene ID" value="PHAVU_001G071800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SWYQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCASKLD"/>
    <dbReference type="OrthoDB" id="1368054at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008502">
        <property type="entry name" value="Prolamin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31951">
        <property type="entry name" value="BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31951:SF22">
        <property type="entry name" value="ECA1 GAMETOGENESIS RELATED FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05617">
        <property type="entry name" value="Prolamin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756600" description="Prolamin-like domain-containing protein" evidence="2">
        <location>
            <begin position="27"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="Prolamin-like" evidence="3">
        <location>
            <begin position="48"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="13918" checksum="C07F0A5F91343342" modified="2014-02-19" version="1">MATFNNFSLLLCFVISSSLMFNIGLSDIALTPSNTPGPVSSYEDYLTNCASKLDSICGKDIFFAIFFGNTTIIEDCCDELVNDVGKVCHDDMTKYVLTKSKFKNSDVQILERSQKIWNDCVSVEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWM4</accession>
    <name>V7CWM4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G164700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWM4"/>
    <dbReference type="SMR" id="V7CWM4"/>
    <dbReference type="Gramene" id="ESW34591">
        <property type="protein sequence ID" value="ESW34591"/>
        <property type="gene ID" value="PHAVU_001G164700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34592">
        <property type="protein sequence ID" value="ESW34592"/>
        <property type="gene ID" value="PHAVU_001G164700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTTN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WDTDDGD"/>
    <dbReference type="OrthoDB" id="1926212at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003107">
        <property type="entry name" value="HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR26312">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR26312:SF225">
        <property type="entry name" value="TPR REPEAT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00386">
        <property type="entry name" value="HAT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="340"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="140"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="363" mass="39624" checksum="A12BEA2B5AD11AF6" modified="2014-02-19" version="1">MLLRSSSTPVLGSLLSNFTDSPNNNIHSESSHAPKHLPPTSFPQHYHKLYVHQTGSFTHPSFSCGSSPISPSIGELERQNKGFRRVQSDGNLQDLAYSCNNEDILEFSEPPKRFSTRNRCLVLETIPSFSVGKHNGLRVEEEDEEMESESEDGEEKKGEGLSVVNGVVLSEGGKAEDGVCRVSFGEQEEVGSGKEMYLAKGLGVECCGDGIGGCIGGGGGSSDQNPLGSGGNGDRHEVEEFYKKMVKENPGDPLFLRNYANFLYQCKQDLEGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDQERASSYFERAVQASPEDSHVHAAYASFLWDAEEEEDGNNEPQCLPPHSHQGAMATAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXX5</accession>
    <name>V7CXX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G095200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXX5"/>
    <dbReference type="Gramene" id="ESW33741">
        <property type="protein sequence ID" value="ESW33741"/>
        <property type="gene ID" value="PHAVU_001G095200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEWAYLL"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050872">
        <property type="entry name" value="PPR_P_subfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128">
        <property type="entry name" value="MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46128:SF194">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="113"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="216"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="251"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="286"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="321"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="357"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="430"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW33741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="495" mass="56995" checksum="46845E4DE40AD38B" modified="2014-02-19" version="1">MHSILYRAIIVGDSRCICYTSRNFCSALGIRHFSHKEQCEEELTRYLDIITVKLGKGSSEEETLHTLSNDQACDAIPISQNLVHLLLQRYKDDWQCALGVFRWAGSQSSFRHSPESYDMMVDILGRMKVMKKLRDLLEEMRKSGVVTMNTVAKVMRRFVGAGQWVDAVKIFDDLQALGLEKNIESMNLLLDTLCKEKFVEQAREIFLKLKQHIAPNAHTFNIFIHGWCKICRVEEAHWTIEEMKGYGCRPCVISYSTIIQCYCQEGDFSKVYELLDEMQAQGCSANVVTYTTIMSALAKAEKFEEALKIPERMRSSGCRPDTLFFNSFLYTLGRAGRLDDAAYVFNVEMPKAGVSPNTSTYNSLISMFCHYAQEKRAFEILKEMENSDYCKPDAQTYHPLIKSCFRTGIIDSVLNDILNDMINKYHLSLDLSTYTLLIHGLCRGDRCNWAFSLFEEMIDQDIVPRFRTCRLLLDEVKQKNMFQAAEKIEDLLKKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7D007</accession>
    <name>V7D007_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G187300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D007"/>
    <dbReference type="STRING" id="3885.V7D007"/>
    <dbReference type="Gramene" id="ESW34855">
        <property type="protein sequence ID" value="ESW34855"/>
        <property type="gene ID" value="PHAVU_001G187300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQBC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCEIITQ"/>
    <dbReference type="OrthoDB" id="1918879at2759"/>
    <dbReference type="PhylomeDB" id="V7D007"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33623:SF5">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33623">
        <property type="entry name" value="OS04G0572500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="256"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="367"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="318"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="371"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="512" mass="58946" checksum="43FD476C4EDCEDC1" modified="2014-02-19" version="1">MAQRYLLHQLLQEDQEPFLLTKYISDRRSQIKRPFPNNTLQVKKRKSTNPSANFPGNLCKSVCLFSLTDTPDFRKSPLFEFASAAKSPCKSPNAIFLHIPSRTASMLLEAAVRIQKHSSPASRPKTKAQSFGLLGSLYKRLTQRSQKKREIEGGGSVKVSVKDILRWDSSVGRKKSSNKKEDEETVNVNASVCEVGFACSYNGRTSSALWSETNEDKSLDLETSSSGYSEEIHFLTNHKNSTCFCESPFRFVLQTNSPSSGHHTPEFPSPSRHATEEKESNEGERVKKFESGEEEEEDKEQCSPVCVLDPPFEDDDEGHGNGDEGEEGRFDLECSYAIVQRVKQQLLYKLRRFEKLAELDPVELERRMHDQDDDEDETLMEEEGCENEDKETSRKENDFREVILQALCQSRIYDRQQIPDDFKKLVSDIIMEEERALDRLEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSREDGEWKKNVEQIRKMAGELECAIFGFLVEEFSEELVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7D068</accession>
    <name>V7D068_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_001G265500g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D068"/>
    <dbReference type="SMR" id="V7D068"/>
    <dbReference type="STRING" id="3885.V7D068"/>
    <dbReference type="Gramene" id="ESW35797">
        <property type="protein sequence ID" value="ESW35797"/>
        <property type="gene ID" value="PHAVU_001G265500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPZR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACSGWAY"/>
    <dbReference type="OrthoDB" id="978612at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000198">
        <property type="entry name" value="receptor protein kinase TMK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000226">
        <property type="entry name" value="receptor protein kinase TMK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000190">
        <property type="entry name" value="Receptor-like kinase TMK4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052422">
        <property type="entry name" value="Auxin_Ser/Thr_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47986">
        <property type="entry name" value="OSJNBA0070M12.3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47986:SF10">
        <property type="entry name" value="RECEPTOR-LIKE KINASE TMK4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 23" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 22" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="23">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004758293" description="non-specific serine/threonine protein kinase" evidence="23">
        <location>
            <begin position="31"/>
            <end position="931"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="487"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="24">
        <location>
            <begin position="584"/>
            <end position="864"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="21">
        <location>
            <begin position="451"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="21">
        <location>
            <begin position="904"/>
            <end position="931"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="21">
        <location>
            <begin position="452"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="21">
        <location>
            <begin position="904"/>
            <end position="914"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="612"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW35797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="931" mass="99860" checksum="EE12A18545E4A657" modified="2014-02-19" version="1">MATSKLKRKTLHSLCNLFLLFFTLAGTAIADDAAVMSKLKEALSPTPSGWSGTSFCDWKGVGCRGNSVTSINIASQSLTGTLPLDLNSLSQLTSLSLQSNALAGALPSLANLSMLQTVFLGGNNFTSIPKGCFQGLTSLQTLSIEDCFNLAPWSIPTELTQSSNLVKLDLGSTNLIGTLPDVFDSFVSLQELRLSYNNLTGGLPKSFAGSGIQYLWLNNQKDGFGFSGTIEVLASMTHLTQVWLQKNLFTGPIPDLSNCTTLFDLQLRDNQLTGVVPPSLMSLSSLQNVSLDNNVLQGPFPSFGKGVKVTLDGVNSFCTKDTGPSGPCDSRVTTLLDIAKDFGYPIKLARSWSGNDPCADWSFVVCAAGKIVTVNLAKQNLTGTISPAFANLTDLRNLYLNSNNLVGSIPGGLTNLAQLEVLDVSNNDLSGDVPKFPSKVKFSSAGNARLGHSGGGGGNGSTPSNGSGGAPSGSPSAASGGSGLSPAWIGGIVVIAVFFVAVVVFVFCKCHAKNRHGKFGRVNNPENGKGEVKIDMMSVTNSNGYGGVPSELQSQGSERSDINVFEGGNATISIQVLRQVTDNFSQNNILGRGGFGVVYKGELHDGSKIAVKRMESVATGSKGLNEFQAEIAVLSKVRHRHLVALLGFCINGNERLLVYEYMPQGTLTQHLFDWQENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEEGYGIDVHMSLPQALQRWQANEGTSTMFDMSTSQTQSSIPAKPSGFADSFDSMDCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0T9</accession>
    <name>V7D0T9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G209000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0T9"/>
    <dbReference type="SMR" id="V7D0T9"/>
    <dbReference type="STRING" id="3885.V7D0T9"/>
    <dbReference type="Gramene" id="ESW35125">
        <property type="protein sequence ID" value="ESW35125"/>
        <property type="gene ID" value="PHAVU_001G209000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5CS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKMAGRI"/>
    <dbReference type="OrthoDB" id="841681at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051955">
        <property type="entry name" value="PME_Inhibitor"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080:SF296">
        <property type="entry name" value="OS05G0360900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756027" description="Pectinesterase inhibitor domain-containing protein" evidence="3">
        <location>
            <begin position="25"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="4">
        <location>
            <begin position="41"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="195" mass="20911" checksum="48E895EE5B5B4CF3" modified="2014-02-19" version="1">MEHSTKLFWALVLCVAVMAHQTTALEILKGTNPLIGEVTLRGKSLIDKVCTLSPSRDICVQVLSSDPVKSPNANLKDLAIISLRFAATNASDILTDAKILIDDDNLDPDVQQGLADCKENILDAESQLEDTIAALMVDSEVDAQLWLKAALAAIDTCDASIPGDDDVLSVKSAIFRKLCNIATAVNKLLVNPTKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2E0</accession>
    <name>V7D2E0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DRBM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G231400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2E0"/>
    <dbReference type="SMR" id="V7D2E0"/>
    <dbReference type="STRING" id="3885.V7D2E0"/>
    <dbReference type="Gramene" id="ESW35391">
        <property type="protein sequence ID" value="ESW35391"/>
        <property type="gene ID" value="PHAVU_001G231400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYBS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RGANMIQ"/>
    <dbReference type="OrthoDB" id="5988181at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00048">
        <property type="entry name" value="DSRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014720">
        <property type="entry name" value="dsRBD_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46031">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46031:SF37">
        <property type="entry name" value="DRBM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00035">
        <property type="entry name" value="dsrm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00358">
        <property type="entry name" value="DSRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54768">
        <property type="entry name" value="dsRNA-binding domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50137">
        <property type="entry name" value="DS_RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DRBM" evidence="5">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="DRBM" evidence="5">
        <location>
            <begin position="62"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="220"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW35391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="249" mass="27226" checksum="5556E992A30CB1F7" modified="2014-02-19" version="1">MLTRHDPRFRSTVTVDGMSYTSPNLFSQRKPAEQDAARIALLSLQEHREDDEPPVVHENITFSKAILHDYAGKLNLEKPEYNIVQLEGPHPLHFVSSVRFNGTHYTGTTAKNKKTAEQLAAYHAIVTMLDGCTSGLLYETMKAKYRLPGAIKPIEPLGIGATNSISAAMTSRENTYVSLSHKNKEAAVVVAAHVPSQVPENMSPVQTTVAEIPQLNLLPSQEQSTATSGSWELSTGDGSSVMKSKIDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2M8</accession>
    <name>V7D2M8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G263500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2M8"/>
    <dbReference type="SMR" id="V7D2M8"/>
    <dbReference type="Gramene" id="ESW35775">
        <property type="protein sequence ID" value="ESW35775"/>
        <property type="gene ID" value="PHAVU_001G263500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AICYTVC"/>
    <dbReference type="OrthoDB" id="655540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015179">
        <property type="term" value="F:L-amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF696">
        <property type="entry name" value="AMINO ACID TRANSPORTER TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="150"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="293"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="402"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="436"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="8">
        <location>
            <begin position="74"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW35775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="474" mass="51686" checksum="18B6620EE3F97439" modified="2014-02-19" version="1">MLKSIGKSLMRVQQKCVKKQKSDEVDKSVSVHGDEDEDVVVLAVQCCNCSTEENKQCNCDHIHAADDQNHANSNSSFTHSVINMVGMLIGLGQLSTPYAIVSGGWVSAFLLIGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIIYMEVFMALVSYTISLHDNLTRVFMGTSLKHHFPKFSSSQLLTVVAVLICLPSLWIRDLSSISFLSTLGILMSLLIFVCVAATALLGHIPSNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIVSFAVVTGIYTTLGFMGARMFGKDVKSQITLSMPPEKIVTKIALWATVVAPMTKYALEFTPLAIQLEHALPSTMSCRTKMIIRGCVGSFSLLVILSLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKICWAQMSYPLLLLNLFLIIFGFLLALIGTISSSSFLLKTFQLHHSTSPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0W8</accession>
    <name>A0ACC3P0W8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967770">
        <property type="protein sequence ID" value="KAK6645918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="365" mass="39535" checksum="D7E3177495A437E4" modified="2026-01-28" version="1">MVTRIVDLRSDTVTKPTEAMRAAMASAEVDDDVLGNDPTAFRLEAEMAKTMGKEAALFVPSGTMGNLICVLVHCDVRGSEVILGDNCHIYIYENGGIATIGGVHPRPVKNNDDGTMDIDLIETAIRDPRGELLYPTTKLICLENTHANSGGRCLSVEYTDRVGELAKKHGLKLHIDGARIFNASVALGIPVDRLVQAADSVSVCLSKGIGAPVGSVIVGSENFIAKARRLRKTLGGGMRQIGILCAAALVALQENIGKLENDHKKARLLADGLRELKGLRVDTLGVETNIVFIDIEDGIQTRAEKICKYLEERGILLMQESSSRMRVVLHHQISASDVQYALSCFKAMLTTNQQVVKGVEKEMDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AE12</accession>
    <name>V7AE12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">CRAL-TRIO domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G042900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the SFH family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AE12"/>
    <dbReference type="SMR" id="V7AE12"/>
    <dbReference type="Gramene" id="ESW03797">
        <property type="protein sequence ID" value="ESW03797"/>
        <property type="gene ID" value="PHAVU_011G042900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1471">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1434354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00170">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.525.10:FF:000011">
        <property type="entry name" value="SEC14 cytosolic factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.525.10">
        <property type="entry name" value="CRAL-TRIO lipid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.20">
        <property type="entry name" value="N-terminal domain of phosphatidylinositol transfer protein sec14p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001251">
        <property type="entry name" value="CRAL-TRIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036865">
        <property type="entry name" value="CRAL-TRIO_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011074">
        <property type="entry name" value="CRAL/TRIO_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036273">
        <property type="entry name" value="CRAL/TRIO_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051026">
        <property type="entry name" value="PI/PC_transfer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45657">
        <property type="entry name" value="CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45657:SF29">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL_PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00650">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03765">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00180">
        <property type="entry name" value="CRETINALDHBP"/>
    </dbReference>
    <dbReference type="SMART" id="SM01100">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00516">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52087">
        <property type="entry name" value="CRAL/TRIO domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46938">
        <property type="entry name" value="CRAL/TRIO N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50191">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="423"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="CRAL-TRIO" evidence="10">
        <location>
            <begin position="142"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="376"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="382"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00038020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW03797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="565" mass="64204" checksum="91D67C06AD4F1296" modified="2014-02-19" version="1">MCDIIAMPSMPITDRPAKGVEMEYLEDDKKTKLGSLKKVAISASSKFKHSLQKKGRRHSRVMSIAIEDEVDAEELQSVDAFRQTLILEELLPSKHDDHHMMLRFLRARKYDIEKTKQMWADMLQWRREFGADTIMEDFEFKELQEVRKYYPQGNHGVDKQGLPIYIERLGQVDSNKLLQVTTLDRYLKYHVREFERTFLVKFPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCRDKGGCLLSDKGPWNDPEILKMVQNGEGKCKRKTLSGIEVKTIIEEDTACQKVEYDSLNKESAAVEHPSTSPKVTFAPVNNTSWEKTEQNDELGLSKDCSPSNNSSKGFRIPFTGGIMSIIMGVIAMIRMAKNMPRKITGAELFGNTAYCSSNEMKTPDISMDDQMPMMKRIVELEEKVNELSKKPVMPPEMEELLNKTLNRVSTLEQELVITKKSLDDAFTRQVELQTQIDKKKKKNSAGKVLGIHCCLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEG5</accession>
    <name>V7AEG5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G052300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEG5"/>
    <dbReference type="SMR" id="V7AEG5"/>
    <dbReference type="STRING" id="3885.V7AEG5"/>
    <dbReference type="Gramene" id="ESW03919">
        <property type="protein sequence ID" value="ESW03919"/>
        <property type="gene ID" value="PHAVU_011G052300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVX1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TSFWQRD"/>
    <dbReference type="OrthoDB" id="2289628at2759"/>
    <dbReference type="PhylomeDB" id="V7AEG5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005689">
        <property type="term" value="C:U12-type spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052831">
        <property type="entry name" value="Apoptosis_promoter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031974">
        <property type="entry name" value="PDCD7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48190">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48190:SF2">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16021">
        <property type="entry name" value="PDCD7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="285"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="198"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="290"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="301"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW03919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="407" mass="46109" checksum="CD91A9405784749B" modified="2014-02-19" version="1">MNPIPFQSVAPPPPPPWFPILPSEPPNSASFWENRNVSDRLRELRHTLNLAKAMQKELEMLMVVKDGKGSLEGVKLVTNEPCHSGFLKCIEDRGVSVESLESFAVEAANSLMSKLRAQLEPFRYVADETSPWEEKSAVARLANKVNKSKRNKLWRKKKRKRVAELIAKEHEKFEQMDREADDWIAREKAKEIANSKVLKMKEIAKSKAKEEKKKLEAELELLLVVEKLQELRSIRIQRLKKQGHFLPEEDDKFLDRVQAAVEEEEREALAALEADAAKEAIATAEESRKAIQNQGKLSKGSNDDSEVKDNTEQIDPSVTEEGSGAFDENKSSKIGQISGGAYDPLANLPIEFYHYYYGSNNDMGTLIEVRRGWDAYIRPGGSRIPGHWVQPPPPANEIWASYLVRPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFB0</accession>
    <name>V7AFB0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G080900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RNase PH family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFB0"/>
    <dbReference type="SMR" id="V7AFB0"/>
    <dbReference type="STRING" id="3885.V7AFB0"/>
    <dbReference type="Gramene" id="ESW04267">
        <property type="protein sequence ID" value="ESW04267"/>
        <property type="gene ID" value="PHAVU_011G080900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWHI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCCVYGP"/>
    <dbReference type="OrthoDB" id="27298at2759"/>
    <dbReference type="PhylomeDB" id="V7AFB0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000177">
        <property type="term" value="C:cytoplasmic exosome (RNase complex)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000176">
        <property type="term" value="C:nuclear exosome (RNase complex)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071028">
        <property type="term" value="P:nuclear mRNA surveillance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071051">
        <property type="term" value="P:poly(A)-dependent snoRNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016075">
        <property type="term" value="P:rRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009845">
        <property type="term" value="P:seed germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034475">
        <property type="term" value="P:U4 snRNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11371">
        <property type="entry name" value="RNase_PH_MTR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.230.70:FF:000015">
        <property type="entry name" value="Exosome complex component RRP41-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="entry name" value="GHMP Kinase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050080">
        <property type="entry name" value="RNase_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11953:SF2">
        <property type="entry name" value="EXOSOME COMPLEX COMPONENT MTR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="Ribonuclease PH domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0271">Exosome</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="9">
        <location>
            <begin position="40"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Exoribonuclease phosphorolytic" evidence="10">
        <location>
            <begin position="168"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="27292" checksum="89BAB793884125BF" modified="2014-02-19" version="1">MAGKGGATPATYSPSLTVDKKKPPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEVGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYSAMLNKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSKNLVIDPILEEENCQDGSLMITCMPSRYEITQLTVTGEWSSPRINEGMQLCLDACAKLAKIMRSCLKEAASDSRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG99</accession>
    <name>V7AG99_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G082800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AG99"/>
    <dbReference type="Gramene" id="ESW04290">
        <property type="protein sequence ID" value="ESW04290"/>
        <property type="gene ID" value="PHAVU_011G082800g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10431039at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="132" mass="14887" checksum="5AFA6BADD85F7265" modified="2014-02-19" version="1">MSKFHGQGFGFSMYELIISCSSGWWTKDLIQVGLSKYIQDLISWKSVCPHHFPTLGHIFSLLHHYECCVHCLSPKQLALFLCREGCGSYMHQAHSSSCSLSSLVKPHNFCGLFTLAVDKGGLSYAIRYPRQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGS0</accession>
    <name>V7AGS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Oxysterol-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G063500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the OSBP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGS0"/>
    <dbReference type="SMR" id="V7AGS0"/>
    <dbReference type="Gramene" id="ESW04053">
        <property type="protein sequence ID" value="ESW04053"/>
        <property type="gene ID" value="PHAVU_011G063500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1737">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RPSNCNE"/>
    <dbReference type="OrthoDB" id="14833at2759"/>
    <dbReference type="PhylomeDB" id="V7AGS0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032934">
        <property type="term" value="F:sterol binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.120:FF:000009">
        <property type="entry name" value="oxysterol-binding protein-related protein 3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.3490:FF:000008">
        <property type="entry name" value="Oxysterol-binding protein-related protein 3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037239">
        <property type="entry name" value="OSBP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000648">
        <property type="entry name" value="Oxysterol-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018494">
        <property type="entry name" value="Oxysterol-bd_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10972:SF136">
        <property type="entry name" value="OXYSTEROL-BINDING PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10972">
        <property type="entry name" value="OXYSTEROL-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01237">
        <property type="entry name" value="Oxysterol_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144000">
        <property type="entry name" value="Oxysterol-binding protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01013">
        <property type="entry name" value="OSBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="4" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW04053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="454" mass="51850" checksum="AE6B21A97793A25B" modified="2014-02-19" version="1">MGSPSKKNESKGFFAAMSSIFTDAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQKGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAFQRTWKPFNPILGETYELANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPIGRTRVTLKRDGVILDLVPPSTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHLADVPKNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKKTREEKGHKFVPRWFDLTEEVTTTPWGDLEIYQYNGKYTEHRAAADDMGSIDDCDVKAIEFNPWQYGNLATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJF2</accession>
    <name>V7AJF2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G203100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJF2"/>
    <dbReference type="Gramene" id="ESW05712">
        <property type="protein sequence ID" value="ESW05712"/>
        <property type="gene ID" value="PHAVU_011G203100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PANPECR"/>
    <dbReference type="OrthoDB" id="2973320at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF51">
        <property type="entry name" value="DISEASE RESISTANCE RPP13-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="NB-ARC" evidence="4">
        <location>
            <begin position="49"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="5">
        <location>
            <begin position="304"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="6">
        <location>
            <begin position="551"/>
            <end position="674"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="999" mass="114349" checksum="0A06C22D702F99AA" modified="2014-02-19" version="1">MELVIEDLEDLATRSHVLGLKRADDVGVRSGSKISTTYLPNESDIYGREDDKQFVCNWLTSDTHNNLSILCIVGMGGVGKTTLAQHVFNDPRMDEAKFDVKAWVCVSDEFDVFKVSRAILEHVTTSTDDSRDIEMVHRRLKEKLTGKKFLLILDDVWNENQFKWEEVQKPLVFGAQGSRILVTTRSKEVASTMRSEEHSLKQLQEDDCWNLFAKHAFRDDDAPANPECREIGMKIVKKCKGLPLALETMGSMLYNKSSVSEWKTVFQSEVWEFSKERCDIIPALALSYIHLPSHLKVCFVYCALFPKDYKFKKEDLIHLWMTRNFAHYRQPSRTPEKVCQQYFNDLLSRSFFQQSKKEVFVMHDLLHDLAKYVSGGIYFRSENQTEKIPEVTRHFSFKHGYPRCFDGFRTLSNTERIRTFISNGIKMSIHELLSKFKIIRILSLSHCSDLQELPDSVGNLEHLRSLDLSSTRIKRLTEKICSLSHLQILKLNYCRDLDELPSNLYLLTNLFRLELIETKVKKVSPHLGKLKNLKVVMNFFNVGHGREFGVQQLGELNLEGSLSIGDLKNISNSLDALEVDLKNKTHLVALTLEWGWNRNSIDSKKEEDVIENLQPSKNLKKLSIIGYGGKRFPNWLHENSLSNIASLMLDGCEFCQCLPPLGLLPFLKVLKISRLDGIVSVDADFHGNNSSSFKSLETLDFSFMSQWEKWECQVVTGAFPRLRDLSITNCPKLKRQLPEQLIPLETQEVEDCQQLEPSTPRIVEEVTLKYCLKFESLRRLWIKDCPRLVSFPEGGLPSNLEKLTIEDCSRLESLPDEGFPSNLQTLTIKDCRRLKSFPHRGFPSNLHTLTIQGCSVLESFPNGGFPSNLKVLRIINCSRLVGSLKGAFTDSSSLETLWIAKLDAECFPDEGLLPLSLTSLTISDCPNLQKLNYKGLHQLSSLKNLDLRNCLNLHRLPEEGLPKSISNLNIRGCPLLEPRCRKRRGEDWEKIAHIQNISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJN6</accession>
    <name>V7AJN6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BURP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G182200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJN6"/>
    <dbReference type="SMR" id="V7AJN6"/>
    <dbReference type="STRING" id="3885.V7AJN6"/>
    <dbReference type="Gramene" id="ESW05475">
        <property type="protein sequence ID" value="ESW05475"/>
        <property type="gene ID" value="PHAVU_011G182200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQHP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MWGEKER"/>
    <dbReference type="OrthoDB" id="1338791at2759"/>
    <dbReference type="PhylomeDB" id="V7AJN6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044816">
        <property type="entry name" value="BURP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004873">
        <property type="entry name" value="BURP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31236:SF35">
        <property type="entry name" value="ABUNDANT PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31236">
        <property type="entry name" value="BURP DOMAIN PROTEIN USPL1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03181">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01045">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51277">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753294" description="BURP domain-containing protein" evidence="2">
        <location>
            <begin position="22"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="BURP" evidence="3">
        <location>
            <begin position="67"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="29885" checksum="8D6403F7191992C6" modified="2014-02-19" version="1">MEFGYLIFLAFLCLTLREIDASQSAKDYWFSVFPNTTVPKPLRDLVLPPSKANLPIQVEEEKQYWTLFFEHELHPRKMMHLGIHNNSNTKPSSRTTSQPFGAWLHGQVSEKYNLDEVCGKEAGKGEEKFCAASLESMMGFATSKLGKNIKVISSSFDKNHDEYSVEEVKRVGEKAVMCHRLNFEKVVFYCHQINATTTYMVPLVASDGTKAEALTICHHDTRGMDPDVLYQVLKVKPGTVPVCHFVGNKALAWVPNLGTKESCFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKY4</accession>
    <name>V7AKY4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G188000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEFL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKY4"/>
    <dbReference type="SMR" id="V7AKY4"/>
    <dbReference type="Gramene" id="ESW05538">
        <property type="protein sequence ID" value="ESW05538"/>
        <property type="gene ID" value="PHAVU_011G188000g"/>
    </dbReference>
    <dbReference type="OMA" id="CNADCHR"/>
    <dbReference type="OrthoDB" id="1430009at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031640">
        <property type="term" value="P:killing of cells of another organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010851">
        <property type="entry name" value="DEFL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07333">
        <property type="entry name" value="SLR1-BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0295">Fungicide</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5012881356" description="Knottin scorpion toxin-like domain-containing protein" evidence="6">
        <location>
            <begin position="16"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="73" mass="8057" checksum="135400767EA9D197" modified="2014-02-19" version="1">MKLITSVLILLLVLAIDIENEGAMKVVEAGRCEEKLNEDCQESKCNSDCVRKHGNLASGRCNAIEDCICRFPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALI9</accession>
    <name>V7ALI9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G202700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALI9"/>
    <dbReference type="Gramene" id="ESW05708">
        <property type="protein sequence ID" value="ESW05708"/>
        <property type="gene ID" value="PHAVU_011G202700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10569801at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="176" mass="19791" checksum="3E9D125CE2AB6544" modified="2014-02-19" version="1">MGREIVDQESIKEPERQIWRFDEKPLPENDLSIGQSFIFRVARFDRSGNDSSLGHFFIFKVLRFDGKPLSGNDSSLGQSFIITVWRFDGKPLSGNDSSTEQPTIFKVWRVDGKPSSGNESSTEQPSIVRVWRFDGKPLIGNDLSLGISLIFKVSRFDGKPLSESGDLMEIVCRGTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMC0</accession>
    <name>V7AMC0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Mitochondrial import inner membrane translocase subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G012400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Heterohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Mitochondrion inner membrane</location>
            <topology evidence="8">Peripheral membrane protein</topology>
            <orientation evidence="8">Intermembrane side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The twin CX3C motif contains 4 conserved Cys residues that form 2 disulfide bonds in the mitochondrial intermembrane space.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the small Tim family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMC0"/>
    <dbReference type="STRING" id="3885.V7AMC0"/>
    <dbReference type="Gramene" id="ESW06013">
        <property type="protein sequence ID" value="ESW06013"/>
        <property type="gene ID" value="PHAVU_010G012400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3479">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LRCAQKF"/>
    <dbReference type="OrthoDB" id="1551503at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.810">
        <property type="entry name" value="Mitochondrial import inner membrane translocase subunit tim13 like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050673">
        <property type="entry name" value="Mito_inner_translocase_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004217">
        <property type="entry name" value="Tim10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035427">
        <property type="entry name" value="Tim10-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13172">
        <property type="entry name" value="MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02953">
        <property type="entry name" value="zf-Tim10_DDP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144122">
        <property type="entry name" value="Tim10-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7 8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="4 8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0811">Translocation</keyword>
    <keyword evidence="1 8" id="KW-0813">Transport</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Tim10-like" evidence="9">
        <location>
            <begin position="24"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU367043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="11884" checksum="703BA2198D11E45F" modified="2014-02-19" version="1">MDKKIISDLDNCPEEDKERMSTMVDQLQFRDSLRMYNSVVERCFNECVDTFYRKSLTKQEETCVLRCAQKFLRLSTQVGLRFSDLNQEASTRDKGHAYKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMC2</accession>
    <name>V7AMC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G073400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMC2"/>
    <dbReference type="SMR" id="V7AMC2"/>
    <dbReference type="STRING" id="3885.V7AMC2"/>
    <dbReference type="Gramene" id="ESW06752">
        <property type="protein sequence ID" value="ESW06752"/>
        <property type="gene ID" value="PHAVU_010G073400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5EP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKGVRLS"/>
    <dbReference type="OrthoDB" id="2017571at2759"/>
    <dbReference type="PhylomeDB" id="V7AMC2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11454">
        <property type="entry name" value="bHLH_AtIND_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000089">
        <property type="entry name" value="Transcription factor LAX PANICLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914:SF2">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH140-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914">
        <property type="entry name" value="TRANSCRIPTION FACTOR HEC3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="33"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="20"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW06752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="158" mass="18141" checksum="9D26C23FB691EF35" modified="2014-02-19" version="1">MDYIHPASSAGSSSKINRSKEKKGAKKCKGVRLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIQYVKYLKTQIWLHQTMINFFDDNDSLSPIYLSDCYFPSDPSEHFISPQQDPQLDHSMHNFPHLPQLQCSFHGEDTTYFDMPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMQ1</accession>
    <name>V7AMQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G074400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMQ1"/>
    <dbReference type="SMR" id="V7AMQ1"/>
    <dbReference type="STRING" id="3885.V7AMQ1"/>
    <dbReference type="Gramene" id="ESW06764">
        <property type="protein sequence ID" value="ESW06764"/>
        <property type="gene ID" value="PHAVU_010G074400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISPMYMG"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11064">
        <property type="entry name" value="CYP86A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002403">
        <property type="entry name" value="Cyt_P450_E_grp-IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24296">
        <property type="entry name" value="CYTOCHROME P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00465">
        <property type="entry name" value="EP450IV"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753582" description="Cytochrome P450" evidence="9">
        <location>
            <begin position="22"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="443"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602403-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="498" mass="56497" checksum="FBBB8144FA9F41C2" modified="2014-02-19" version="1">MFIFYLTLLLSLGFLFRFFNGKQGCYHHNHAPPSHPIIGCLVSFYQNRHRLLDWYTEHIAQSPTHTIVVQRLGARRTVVTANPYNVEYILKANFGNFPKGKPFTEILGDLLGCGIFNVDGELWQAQRKLASHEFSTRSLKDFIVKTLKEEVQHRLIPLLEQASRENHVIDLQDVLRRLTFDTVCKVSLGYDPCCLDLNKPLPPLLTAFDTASEVSAARGASPVFLVWKVKRMLNVGSEKALKEAVKLVHESVMKIVKAKKDEITSNGGKGGTDLLVRLLEAGQEETVVRDMVISMIMAGRDTTSAAMTWLFWLLSKHGVEEALLVKEVYCAKERSEGLDYECLKEMKLLKACLCESMRLYPPVAWDSKHAGFADVLPDGTHVRKGDRVTYFPYGMGRMEGLWGEDCCEFKPQRWFDEENVDKGVLKCVNPYKFPVFQAGPRVCLGREMAFIQMEYVVASILNHFVISPVSHEHPRFVPLLTAHMAGGFNVRIKLRSEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANE4</accession>
    <name>V7ANE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">EGF-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G100800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANE4"/>
    <dbReference type="STRING" id="3885.V7ANE4"/>
    <dbReference type="Gramene" id="ESW07094">
        <property type="protein sequence ID" value="ESW07094"/>
        <property type="gene ID" value="PHAVU_010G100800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ7Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FSLEWQV"/>
    <dbReference type="OrthoDB" id="69646at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021910">
        <property type="entry name" value="NGX6/PGAP6/MYMK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14319">
        <property type="entry name" value="FIVE-SPAN TRANSMEMBRANE PROTEIN M83"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14319:SF3">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12036">
        <property type="entry name" value="DUF3522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00022">
        <property type="entry name" value="EGF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755789" description="EGF-like domain-containing protein" evidence="8">
        <location>
            <begin position="32"/>
            <end position="821"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="639"/>
            <end position="656"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="663"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="686"/>
            <end position="703"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="746"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="771"/>
            <end position="790"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="9">
        <location>
            <begin position="554"/>
            <end position="565"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW07094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="821" mass="90888" checksum="B28B5670542702D6" modified="2014-02-19" version="1">MPLNSILWCQLNSILLSVLFLFSCSLDLSSATDEFVGATDDVFTVSSFSYPQTTLGPFDLRYIRVDIPPWFSALSIALNSDVDLDVSRVERIPKSSLPIICFRDGSPPLPDALNISLKDSAVIGINGLDNEQCFPMEKNITMKLTNEQISPGAWYIGLFNGIGAARTQSKMIIRGSSYSFSANISVEACSNSMMKGELCNSTVYPLSCTVSDVYNSMKDTVTKPMMENVMSCKSNLDTICAQEGVPELYSLDVTNMAEELTILVANVKLNTTASNNTSSANDVSLMGFVRHGAIPSETLHDYSSDLNKAPLIIRYPLIGRLYISILPVNVSKMFGGTSDGNSKVCYSIESQVLQCAFGKAGPNCTMDSYTLQTVLRRGGPVPFESYFLPVAVGEGASSANFPLEPLLNKSSNKGKTDDIWTYFTFDIPRGAAGRNIHIRLSADVKISYEVYARFGGLPSLDSWDYYYANRTRKSDQSMFFMLYDSSDDKIDFYIIYAREGTWGLGLRHLYTSSDSLKAQTVMSISLEGCPKQCSFHGDCKYSFDASGLTSFSFCSCDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAAILPAYRSLREKAFAEWVLFTSSGIASGLYHACDVGTWCALNFNVLQFMDFWLSFMAVVSTFVYLASIDEVYKRAIHTAVAILTALLAATKATRSSNIVLVIVIGALGLLIAWLIEISKRYRSLSFSFALSLSFLQSMQTMKQWFCNLVKTLLRRFRWGFMVVGFIALAMAGLSWTLETSANYWFWHSFWHVTIYTSSFFFLCSKANIVDDEVLPPSSGNYALTRQDSFSRGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANQ1</accession>
    <name>V7ANQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_010G117600g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANQ1"/>
    <dbReference type="SMR" id="V7ANQ1"/>
    <dbReference type="STRING" id="3885.V7ANQ1"/>
    <dbReference type="Gramene" id="ESW07292">
        <property type="protein sequence ID" value="ESW07292"/>
        <property type="gene ID" value="PHAVU_010G117600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPDNDER"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="PhylomeDB" id="V7ANQ1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001864">
        <property type="entry name" value="Calcium-dependent protein kinase SK5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000085">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000101">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001294">
        <property type="entry name" value="CDPK-related kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7" id="KW-0519">Myristate</keyword>
    <keyword evidence="9 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="136"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="439"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="33"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW07292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="588" mass="65359" checksum="5CE277E686D5F420" modified="2014-02-19" version="1">MGQCYGKSNLTPQNDAAAAEETTVDTVVAVAGSADAPLSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHGKTPKEGPIPEEEAAAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPSASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDESRPIPLDILVYKLVKAYLLATPLKRAAVKALSKALPEDELPYLRAQFRLLGPNRDGLISLDNFKMALVHNATDAMRESRVVDIINAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIASTAFEHFETEGNRLISVEELGRELNLGPSAYSILKDWIRNSDGKLSLLGYTKFLHGVTLRSSNPRHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="70" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANV1</accession>
    <name>V7ANV1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="21">Histone-lysine N-methyltransferase ATX3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_010G113900g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Histone methyltransferase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-lysyl-[histone] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine + H(+)</text>
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            <dbReference type="Rhea" id="RHEA-COMP:9845"/>
            <dbReference type="Rhea" id="RHEA-COMP:9846"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ESW07249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7ANV1"/>
    <dbReference type="Gramene" id="ESW07249">
        <property type="protein sequence ID" value="ESW07249"/>
        <property type="gene ID" value="PHAVU_010G113900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1080">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="308383at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
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        <property type="term" value="C:Set1C/COMPASS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
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        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:chromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
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        <property type="entry name" value="PHD_ATX3_4_5_like"/>
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        <property type="entry name" value="PHD_TCF19_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd20143">
        <property type="entry name" value="PWWP_AtATX3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SET_SETD1-like"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="SET domain"/>
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        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="3"/>
    </dbReference>
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        <property type="entry name" value="ATX3/4/5_PHD"/>
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        <property type="entry name" value="EPHD"/>
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    <dbReference type="InterPro" id="IPR025780">
        <property type="entry name" value="Hist-Lys_N-MeTrfase_ATX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050701">
        <property type="entry name" value="Histone_Mod_Regulator"/>
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        <property type="entry name" value="Post-SET_dom"/>
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        <property type="entry name" value="PWWP_dom"/>
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        <property type="entry name" value="SET_dom"/>
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        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
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    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
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        <property type="entry name" value="Znf_PHD"/>
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        <property type="entry name" value="Znf_PHD-finger"/>
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    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793:SF157">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE ATX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13793">
        <property type="entry name" value="PHD FINGER PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="zf-HC5HC2H_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PHD"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Tudor/PWWP/MBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51805">
        <property type="entry name" value="EPHD"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="PWWP"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="SAM_MT43_TRX_MLL"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PWWP" evidence="16">
        <location>
            <begin position="188"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="14">
        <location>
            <begin position="367"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="14">
        <location>
            <begin position="551"/>
            <end position="602"/>
        </location>
    </feature>
    <feature type="domain" description="PHD-type" evidence="18">
        <location>
            <begin position="605"/>
            <end position="720"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="15">
        <location>
            <begin position="843"/>
            <end position="960"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="17">
        <location>
            <begin position="969"/>
            <end position="985"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
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            <dbReference type="ARBA" id="ARBA00052314"/>
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    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
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    </evidence>
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        <source>
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    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW07249.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="21">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="985" mass="111309" checksum="FCC89E36EF956CF2" modified="2014-02-19" version="1">MIVKRTMKAEAPNLKRCKIDGTENAIQKKRRVNGLYSLGVPGDAEYFSSGSGSWSSEGSYWGGGGEVQSNSNSFMFNRKMVKEARRPPLLRSSRGRVQKLPSRFNDSVLDADGDSSFEDNDKSYVEDGRGGIGVSVERSDSVCCSSSVGRRTGVMAESNTSGISFEGVDQKSNGEKRNEVFKLEDFSLGDIVWAKCGKRYPAWPAVVIDPALEAPESVLSCCIPGALCVMFFGYSKNGTQRDYAWVKQGMVFPFSEFLHRFQGQTRLYKSKPSDFRMALEEAMLAEDGVLDSHLGRVEVPDAEAHPARLMEATCYYVDEEYYGQEQVTGYCAGCGLMLPCKTMKKIKDSNCAPRFYCKHCTKLRKSKQYCGICKRTWHHSDGGNWVCCDGCNVWVHAECDKITSRLFKDLENTDYYCPDCKGKFISNLPASQTYKPRIKSIENSQKSMIPDSVLVVCNGMEGIYIPKLHLVMCNCGYCGSRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWMAEHIPLEGITQQLDQQQVLAFLQEKYEPVNAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVKDLTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAVGILKIPPNSFVKTCVICKQSHGSCITCCKCSTYFHVMCASRAGYTMELHSMEKNGSQITKKLIYCSVHRVPNPDSVLVIHTPLGIFSPRTSLQNQKGCFRGSRLISSKNIELIESSTTENEVVEPLSAARCRVYRRSPNKRANEPIIHWPRGPTRHSLDAITLLNGFKAGDESKVFTSFKERLHHLREMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREAKYRSEGKDCYLFKISEEVVVDATNTGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDERDDLKVPCLCKAPKCRRFMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7API7</accession>
    <name>V7API7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G054700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7API7"/>
    <dbReference type="SMR" id="V7API7"/>
    <dbReference type="Gramene" id="ESW06518">
        <property type="protein sequence ID" value="ESW06518"/>
        <property type="gene ID" value="PHAVU_010G054700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R41B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMEFREL"/>
    <dbReference type="OrthoDB" id="1435707at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061809">
        <property type="term" value="F:NAD+ nucleosidase activity, cyclic ADP-ribose generating"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045344">
        <property type="entry name" value="C-JID"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF259">
        <property type="entry name" value="ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20160">
        <property type="entry name" value="C-JID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance protein Roq1-like winged-helix" evidence="4">
        <location>
            <begin position="139"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="C-JID" evidence="3">
        <location>
            <begin position="566"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="715"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF20160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="715" mass="83249" checksum="B1165828F89B3E53" modified="2014-02-19" version="1" fragment="single">MQKQKLVVPIAAKTLFTGNRDIRRCVGGGSRIIIISRDEHILKTHKVDDVYQVQPLREKNAMQLFCKNAFKVNYILGDYVNLACDVLFHAQGHPLAIEVIGSSLFGRNVSQWRSALDRLRHNKDRNIVDVLRISFDHLEEDKKEIFLDIACFIADNIHGKGDVEKFLSFHGFDYANGILAVIEKSLITCEYGDICMHRLLMDLGKSVATENLEVIYIEKHLNLLHLRDVKFSRSLNHLLNELAYFNWREYSFKCLPQSFQPEKLVELHLFGSSIKQLWKGIKPLHNLKLLNLSFNKYLVEMSDVREALNLERIYLEGCIKLEKLNPLIGLLRSLAILNLRNCKNLVSLSNTILGLYSLEYLNVSGCSKLYNNELLDEQRNTRHLKKLCLAEAPILSQSTSFFINKMLLRPSNLLLPSIPTFPCLLTCLRELDLSFCNLIRIPDAIGKLRCLERLNLKGNNFTKLPNLHNLVRLYHLNLQHCKQFTHLPVLPLQTECSSEIFKLPLSYYKDEDLVGLMIYNCPKLVEREHCTSFIFSWMIQIFQSFEARCFENRQFNFRTPCVGSVIPGSEIPRWFNNQFVVSMDNSIRIDVSPLMHDNNCIGVICCAIFHIDFGGSYDKVIYHKAKIPPVDLRGDLVIDQSYHLWLFYLSRQEFFAEHCNWRWYSFHNGVIGMEFRELIRDWSQIGSIEKQYVKAYINKYGYRWVYEKDQQLPNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7APP3</accession>
    <name>V7APP3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G140200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APP3"/>
    <dbReference type="SMR" id="V7APP3"/>
    <dbReference type="Gramene" id="ESW07559">
        <property type="protein sequence ID" value="ESW07559"/>
        <property type="gene ID" value="PHAVU_010G140200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKDPLEW"/>
    <dbReference type="OrthoDB" id="1857192at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00293">
        <property type="entry name" value="USP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000298">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000211">
        <property type="entry name" value="Dual-specific kinase DSK1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF14">
        <property type="entry name" value="INACTIVE PROTEIN KINASE SELMODRAFT_444075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="5">
        <location>
            <begin position="403"/>
            <end position="679"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="176"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="198"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="219"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="236"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="257"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="750" mass="83254" checksum="8AAB15C86D24554F" modified="2014-02-19" version="1">MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQGSGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDITDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDVEEAGPSPPEQDDMPEKRSKIKLDSLNSIKGPAVTPSSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNGESKKEETIQESHELGDTNSDTESESLSTSSASMRYQPWITELLLHQQSSQRNEERTEISHGMPQASTTRAFLDKYSRLDRGAGFEISSYRNDLDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQKDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYATEELIDPRLDNHYSENEVYCMLHAASLCIQRDPQCRPRMSQVLRILEGDMVMDTNYISTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESVESFSGKLSLDKYRPSYWGDRDKARRASCEDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR34</accession>
    <name>V7AR34_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Lon N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G012900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR34"/>
    <dbReference type="SMR" id="V7AR34"/>
    <dbReference type="STRING" id="3885.V7AR34"/>
    <dbReference type="Gramene" id="ESW08034">
        <property type="protein sequence ID" value="ESW08034"/>
        <property type="gene ID" value="PHAVU_009G012900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4159">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLHEPRY"/>
    <dbReference type="OrthoDB" id="264917at2759"/>
    <dbReference type="PhylomeDB" id="V7AR34"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="entry name" value="LON domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46732">
        <property type="entry name" value="ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46732:SF8">
        <property type="entry name" value="ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="2">
        <location>
            <begin position="76"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="241"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="32290" checksum="1985A494C9A10DA0" modified="2014-02-19" version="1">MAFPQLIPSPSSYSLPHKPSLNPITLSLNPKSPTSPHHLNLAVLRHRCRKPNSTLRCSASSFSEKHHTNSPNSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVSGTAAVGCVGEVIKHESLVDDRFFLICKGQERFRVNSLVRTKPYLVAQVTWLEDRPSPSTDLDLDGLATEVETYMRDVIRLSNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLTREKETLKNTLNYLTAASAVKDVFPSSSSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARA3</accession>
    <name>V7ARA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PCI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G019100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively. Interacts with UCH1 and UCH2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the proteasome subunit S3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARA3"/>
    <dbReference type="SMR" id="V7ARA3"/>
    <dbReference type="STRING" id="3885.V7ARA3"/>
    <dbReference type="Gramene" id="ESW08109">
        <property type="protein sequence ID" value="ESW08109"/>
        <property type="gene ID" value="PHAVU_009G019100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2581">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AKLWFYI"/>
    <dbReference type="OrthoDB" id="1713558at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008541">
        <property type="term" value="C:proteasome regulatory particle, lid subcomplex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042176">
        <property type="term" value="P:regulation of protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.570:FF:000017">
        <property type="entry name" value="26S proteasome non-ATPase regulatory subunit 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050756">
        <property type="entry name" value="CSN3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013586">
        <property type="entry name" value="PSMD3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057985">
        <property type="entry name" value="TPR_PSMD3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10758:SF2">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10758">
        <property type="entry name" value="26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08375">
        <property type="entry name" value="Rpn3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25573">
        <property type="entry name" value="TPR_PSMD3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00753">
        <property type="entry name" value="PAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00088">
        <property type="entry name" value="PINT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0647">Proteasome</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCI" evidence="6">
        <location>
            <begin position="239"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="452"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="12"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="455"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00057191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00065984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW08109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="487" mass="55776" checksum="0ECBA5EFB500E9D0" modified="2014-02-19" version="1">MTQDLEMKDRSTPSNSVSSPAPSTLQNLKEIASLIETGSYSKEVRRIARAVRLTIALRRKLTASIISSFLDHVLAPGSEAHVKLSAYLPKEDDHEMEVDAATSTIQTPAKHLLPELEIYCYLLVLLFLIDKKRYNEAKACSSASIVWLKNTNRRTVDVIASRLYFYYSYSYELTEDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTVFMQKGMEKSLRPYFELTNAVRIGDLELFRNIADKFATTFNADRTHNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLNSSNPIADAESIVSKAIRDGAIDATLDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARW8</accession>
    <name>V7ARW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BEACH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G0355000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7ARW8"/>
    <dbReference type="Gramene" id="ESW08309">
        <property type="protein sequence ID" value="ESW08309"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08310">
        <property type="protein sequence ID" value="ESW08310"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08311">
        <property type="protein sequence ID" value="ESW08311"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08312">
        <property type="protein sequence ID" value="ESW08312"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08313">
        <property type="protein sequence ID" value="ESW08313"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08314">
        <property type="protein sequence ID" value="ESW08314"/>
        <property type="gene ID" value="PHAVU_009G0355000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1787">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDDAVIH"/>
    <dbReference type="OrthoDB" id="26681at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="CDD" id="cd06071">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01201">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1540.10">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000409">
        <property type="entry name" value="BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036372">
        <property type="entry name" value="BEACH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050865">
        <property type="entry name" value="BEACH_Domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031570">
        <property type="entry name" value="NBEA/BDCP_DUF4704"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046852">
        <property type="entry name" value="Neurobeachin_a-sol"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023362">
        <property type="entry name" value="PH-BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743:SF112">
        <property type="entry name" value="BEACH DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743">
        <property type="entry name" value="BEIGE/BEACH-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02138">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15787">
        <property type="entry name" value="DUF4704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16057">
        <property type="entry name" value="DUF4800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13385">
        <property type="entry name" value="Laminin_G_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20425">
        <property type="entry name" value="Neurobeachin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14844">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01026">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81837">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50197">
        <property type="entry name" value="BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51783">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="BEACH-type PH" evidence="3">
        <location>
            <begin position="2407"/>
            <end position="2564"/>
        </location>
    </feature>
    <feature type="domain" description="BEACH" evidence="2">
        <location>
            <begin position="2588"/>
            <end position="2786"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="2786"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW08309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2786" mass="313750" checksum="254321AE07C3D23B" modified="2014-02-19" version="1" fragment="single">MNIVKGVADLIRRTSAAHTGESSSFQAQKCSPPGPRIRFSDAGDEAIVNTLWERYEKADDKVEKKRLLHVFIKQFVIGYKDWEPVNSGILLESASVESLSTADDVVVGCSAGHPVEVIRVLTEEVTQLTSLVTDLNTSLGQSSTDFSGAAAKLFITSEGFFILDALKIIARSLYNCRVFGYYGGIRKLTALMKGAVVQLKTISQALSADANCSDSAVEKIKLLQQILTYVVSIIYIFIDLGSNIDKKDELFCSLVGFISHAETPIISSNSSKVLSTEARLHWRQKAIVSVMEAGGLNWLVELLRVIRRFSLKELLMDDSLRYLCLKILSLALSANLRGQNHFRSIGGLEVLLDGLGFPSNYAKTYCNFVFADGFRDEKPLQKIFQLHILSLDVLREAVFGNMISLQFLCENGRVHKFANSFCSPAFLLQDLEQEKDFTVEHAVGMPALDIQEKENYVKPDAAVLSSGLPSRASFSDFWNDYVVMLSRGLCSFLLVPEGSKSLHVQVSSGRLALPVSSAYFELSIKWVMRVLFIIFPCIKTCSSQSDFPSYLRIFVSALQNTVLNAFRNLLSSSPVSLEIFREEGIWDLIFSENFFYFESGSEESTGQIFAYNEKSAILSASRSTGNIVEVNGVNTLQMEVISFVEFTATCNGNTQNMRELSSLLDALEHSSCNPEIACVLVRSLVRILQLSPERTIDSFKTLSAVSRVLQVACVQAQEYRSQRSIEPSNEKSRMEELVSFQDQCTSNLPETKQSCFNCMKVCMELFAKFLAATKDTKLILHSFTCIDCLFDLFWVEGLRDDVLRHIVDLMKIMPFSEEDKKAKLQLCSKYLEMFTQLKERERSFVDLSIDLLVGMRDMLQANQAYYQTLFRDGECFLHVVSLLNSNLDGANGEKLVLNVLQTLTCLLASNDTSKVAFRALAGKGYQTLQSLLLDFCQSHSSKGLLDALLDMLVDGKYDDKMSPMIKNEDVIILYLIVLQKSSESLKHHGLDLFQQLLKDSISNRASCVRAGMLDFLLNWFSQEDSDSVIFQIAQLIQAIGGHCISGKDIRKIFALLRSEKVGMRRQYCSVLLTSLLAMLHEKGPTAFFDLDGIDSGIMLKTPLQWPLNKGFSFSCWLRIENFPRNGAMGLFSFLSENGKGSLAVLAKEKLTFESINMKRQRVDLRVNLVRKRWHFLCLTHSIGRAFSAGSMLRCYLDGDLVSSERCRYAKVSESLTSCMIGAKLKMPHYEDNVLTFESIGDSCPFFGQIGPVYLFNDAISAEQVQSIYSLGPSYMYSFLDNEALPLSFPGDKVPSGILDAKDGLASRIIFGLNAQASVGRMLFNVSPITSHHQLDKNSFEAAVIGGTQLCSRRLLQQIIYCVGGVSVLFPLITQCCKFEKDGESANGAPLTQTMREWVTTEVIELIASLLDDNLANQQQMHIVSGFSVLGFLLQSVPPRQLNLETLSALRHLFNVVSNSGLSELLVQEAVCNIFLNPHIWVCTVYKVQRELYMFLIQQFDNDPRLLKSLCRLPRVLDIIHQFYCDNVKSQSFVGSNPLQLSISEQVAEERREIPSKEEMHKIRLLLLSLGEMSLRHNISAGDIKALIAFFEKSQDMACIEDVLHMIIRAVSQISLLASFVEQVNIIGGCQVFVNLLQRGYESIRLLSLQFIGRLLVALPTEKKGLRFFNLPVGRPRAISDSQRKIRMQPIFSAISDRLFCFPQTENLCATLFDVLLGGASPKQVLQRNNHLERVRSKGSHFLLPQMLPLIFRYLSGCKNASARMKIIRDLLNLLDSNASNIEAFMEYGWNAWLTSSLKLDVLKDYNAKLPDKGEIGMDELLLVRNLYSLVLCHYLHSVKGGWQQMEETVNFLLMHFEEGGHSYRYFLRDIYEDFIQNLVELSAAVDSIFISQPCRDNTLYLLRLIDEMLISELDKELPFLGSDFDFHVDLEMEQHKEYSTALKEVLIEEADIQTSSKSPNSKQPIPKDDTMEDKWWNLYDKLWVVISKMNGKGSNNMLSKSSALAGPSLGQRARGLVESLNIPAAEVAAVVVAGGISTALTAKPNKNVDKAMVLRGERCPRIIYRLLILYLCKSSLERASRCVHQFISLLPCLLNADDEQSKSRLQLIIWTLLFVRSQYGTLDDGVRFHLLSHLIRETVNIGKSMLATSIASRDDASDPSYNSKDASSIQNLIQKDRVLTAVSEEAKYIKASKMDRTQQIQELHSRVDENSGESSSKKAFEDDIQSSLNSVLASDDSRLAEFNLTYEEKQQNVAEKWIHMFRSLIDERGPWSAKPFPNCVVTHWKLDKIEDTWRRRPKLRQNYHFDENLCSPLSSTGSGVATPINESNHGFVGNIPDQMKQLLLKGIRKITDEGTLDINEANTDISGQKTQTPGDHSDCQSLDLIKDVSDRKDIVQERKDTSSTPETEASEVLVSIPCVLVTPKRKLAGHLAVMKNVLHFFAQFLVEGTGGSSVFRNFDASINSDLTKSDIKQRSYKWPVSGMDPQKGTAVGHVELINGNGPTKLMRCVKRHRRWSVAKIKAVHWTRYLLRFTAIEIFFSDSVAPVFLNFASLKDAKDIGNLIVTTRNEFSFPKGSGKDKSGSISFVDRRVAQEMAETARENWRKREITNFEYLMILNTLTGRSYNDLTQYPVFPWVLADHSSEVLDFNKSSTFRDLSKPVGALDTKRFEVFEDRYRNFCDPDIPSFYYGSHYSSMGIVLYYLLRLEPFTSLHRNLQGGKFDHADRLFQSIESTYRNCLTNTSDVKELIPEFFYMPEFLVNSNSYHLGVKQDGEPIVDVGLPPWAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASE3</accession>
    <name>V7ASE3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G028100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASE3"/>
    <dbReference type="Gramene" id="ESW08210">
        <property type="protein sequence ID" value="ESW08210"/>
        <property type="gene ID" value="PHAVU_009G028100g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="79" mass="8879" checksum="376D36FAD736E30F" modified="2014-02-19" version="1">MEVQARPGNESGYSRGQLAPPQRPELFPLHNHISNSTVVWNYRPSSHINSSAPDAYGAQYAANFTQYYSIPLLLLILFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT81</accession>
    <name>V7AT81_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF1677 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G128400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT81"/>
    <dbReference type="STRING" id="3885.V7AT81"/>
    <dbReference type="Gramene" id="ESW07421">
        <property type="protein sequence ID" value="ESW07421"/>
        <property type="gene ID" value="PHAVU_010G128400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0RC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HMNFCKN"/>
    <dbReference type="OrthoDB" id="1911663at2759"/>
    <dbReference type="PhylomeDB" id="V7AT81"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012876">
        <property type="entry name" value="DUF1677_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108:SF32">
        <property type="entry name" value="DUF1677 FAMILY PROTEIN (DUF1677)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108">
        <property type="entry name" value="OS01G0745000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07911">
        <property type="entry name" value="DUF1677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="160" mass="17553" checksum="5380BB98E620DE36" modified="2014-02-19" version="1">MSAPMIIDPVVISAPETQSAASMLVGQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILRRSLDSPRVRSTPNSPTKTITEIHGSVLTRSESCFPTLTEGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATE0</accession>
    <name>V7ATE0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G079000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATE0"/>
    <dbReference type="STRING" id="3885.V7ATE0"/>
    <dbReference type="Gramene" id="ESW08839">
        <property type="protein sequence ID" value="ESW08839"/>
        <property type="gene ID" value="PHAVU_009G079000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8UV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KYSQVVY"/>
    <dbReference type="OrthoDB" id="1655903at2759"/>
    <dbReference type="PhylomeDB" id="V7ATE0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021899">
        <property type="entry name" value="DUF3511"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33193">
        <property type="entry name" value="DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33193:SF62">
        <property type="entry name" value="FAMILY ABC TRANSPORTER, PUTATIVE (DUF3511)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12023">
        <property type="entry name" value="DUF3511"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="113" mass="13141" checksum="568092F403C4F57A" modified="2014-02-19" version="1">MEEFQRSRSYANGQMMQIESYYGAPSRPYDLRCYSASYAQTQMGPRDLKLKKGKSISAASSFSKSLTLSDPELQRKKRVASYKMYSVEGKIKGSFRKSFRWLKNKYSQVVYGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUS2</accession>
    <name>V7AUS2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G1181000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ASF1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUS2"/>
    <dbReference type="STRING" id="3885.V7AUS2"/>
    <dbReference type="Gramene" id="ESW09324">
        <property type="protein sequence ID" value="ESW09324"/>
        <property type="gene ID" value="PHAVU_009G1181000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3265">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="29755at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006325">
        <property type="term" value="P:chromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1490">
        <property type="entry name" value="Histone chaperone ASF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006818">
        <property type="entry name" value="ASF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036747">
        <property type="entry name" value="ASF1-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04729">
        <property type="entry name" value="ASF1_hist_chap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101546">
        <property type="entry name" value="ASF1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="36" mass="3994" checksum="1282B5A7ED9B1C47" modified="2014-02-19" version="1" fragment="single">MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWZ1</accession>
    <name>V7AWZ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Nucleobase-ascorbate transporter 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G181000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWZ1"/>
    <dbReference type="SMR" id="V7AWZ1"/>
    <dbReference type="STRING" id="3885.V7AWZ1"/>
    <dbReference type="Gramene" id="ESW10103">
        <property type="protein sequence ID" value="ESW10103"/>
        <property type="gene ID" value="PHAVU_009G181000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10104">
        <property type="protein sequence ID" value="ESW10104"/>
        <property type="gene ID" value="PHAVU_009G181000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10105">
        <property type="protein sequence ID" value="ESW10105"/>
        <property type="gene ID" value="PHAVU_009G181000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1292">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RAGWCAS"/>
    <dbReference type="OrthoDB" id="1641903at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF037981">
        <property type="entry name" value="NCS2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11119">
        <property type="entry name" value="XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="224"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="368"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="393"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="425"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="531" mass="57634" checksum="9CC0C7685EAC65CD" modified="2014-02-19" version="1">MAGGGAPAKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNDEKAKVIATLLFVAGINTLLQTMFGTRLPAVIGGSYTFVPTTISIILAGRFSGEPDPAEKFNRIMRSIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPQLILLVFVSQYVPHVLHSGKNIFDRFAVIFTVVIVWIYAHLLTVGGAYNDAPPKTQISCRTDRAGLIDAAPWIRIPYPFQWGAPSFDAGEAFAMMMAAFVSLVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGFGPVNTGARWFNDIINVPFQSKPFVAGVVAYFLDNTLFKRESSIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B269</accession>
    <name>V7B269_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Flap endonuclease GEN-like 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G070200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B269"/>
    <dbReference type="SMR" id="V7B269"/>
    <dbReference type="STRING" id="3885.V7B269"/>
    <dbReference type="Gramene" id="ESW11919">
        <property type="protein sequence ID" value="ESW11919"/>
        <property type="gene ID" value="PHAVU_008G070200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2519">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNLYFRT"/>
    <dbReference type="OrthoDB" id="2959108at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017108">
        <property type="term" value="F:5'-flap endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008821">
        <property type="term" value="F:crossover junction DNA endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009555">
        <property type="term" value="P:pollen development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009650">
        <property type="term" value="P:UV protection"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd09869">
        <property type="entry name" value="PIN_GEN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.150.20:FF:000030">
        <property type="entry name" value="Flap endonuclease GEN-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1010:FF:000032">
        <property type="entry name" value="Flap endonuclease GEN-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.20">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1010">
        <property type="entry name" value="5'-nuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006086">
        <property type="entry name" value="XPG-I_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006084">
        <property type="entry name" value="XPG/Rad2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006085">
        <property type="entry name" value="XPG_DNA_repair_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11081:SF59">
        <property type="entry name" value="FI23547P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11081">
        <property type="entry name" value="FLAP ENDONUCLEASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00867">
        <property type="entry name" value="XPG_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00752">
        <property type="entry name" value="XPG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00853">
        <property type="entry name" value="XPGRADSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00484">
        <property type="entry name" value="XPGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00485">
        <property type="entry name" value="XPGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="5' to 3' exonuclease, C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="PIN domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XPG N-terminal" evidence="15">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="XPG-I" evidence="14">
        <location>
            <begin position="128"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="523"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="533"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="13">
        <location>
            <begin position="600"/>
            <end position="609"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00038112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00073453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW11919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="609" mass="69622" checksum="D69CA320A7283A37" modified="2014-02-19" version="1">MGVGANFWELLKPYARHEDFDFLRNKRVAVDLSFWIVQHENAMKATHVRKPHLRLTFFRTINLLSKFGAFPVFIVDGTPSPLKTQARIARFFRSSGIELTSLPVSEGVSPERSRMFSNRVQECVELVKLLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDMNGVRGIGLDNALHFVIAFNEDDILNRLQEIGKGGNTSQIPSCTIFEDNIDVDGNYPNRKQSHCSFCGHPGSKKDHMKISCEYCVTKDDEGCQRKPEGFKCHCFSCVSNRRHKEQKREENWYSKICHKIAEEPNFPKDEIIDMYLCNDNGYFSVSDGPQIMWGKPNIEMLIDFLNFHQRWEPSYIRRTMFPMMSTIFLRDMSTPTRETLLFGQYEFDSVERVKMRYGYQFYVVKWRRAGGNITTSKVPSNESSVQQDVVELDETVDLLDDCSIPEIRVDDGCSFLFTDENMDLVGTAFPAEVQSFLQEQERKSRKSSTSRCQENEISATPNPRTTQLNITEFFPSTKIKHRQSKQREESSNDADSEGSKGSKMKRKMSNPDKLPKSVRRRLLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2U4</accession>
    <name>V7B2U4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Short-chain dehydrogenase/reductase</fullName>
            <ecNumber evidence="5">1.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G068600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2U4"/>
    <dbReference type="SMR" id="V7B2U4"/>
    <dbReference type="STRING" id="3885.V7B2U4"/>
    <dbReference type="Gramene" id="ESW11900">
        <property type="protein sequence ID" value="ESW11900"/>
        <property type="gene ID" value="PHAVU_008G068600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SINCVHP"/>
    <dbReference type="OrthoDB" id="1933717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05324">
        <property type="entry name" value="carb_red_PTCR-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000312">
        <property type="entry name" value="(+)-neomenthol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045313">
        <property type="entry name" value="CBR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490">
        <property type="entry name" value="(+)-NEOMENTHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490:SF136">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE_REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW11900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="286" mass="31526" checksum="04925B7A6C2F352B" modified="2014-02-19" version="1">MTEPKPRYAVVTGANKGIGLETVNQLASNGVKVVLAARDEKRGHEAIETLKECGLSELVVFHQLDVTLSASIHSLVEFVNTQFGRLDILVNNAGISGVNPYEMEGSIINWRELTQTYEMAEKCLRTNYYGAKETTEAFLPLLKLSNSPRIVNVSSQAGLLKGIANKLAKGVFDDAENLTEDRIDEVLKEFMKDFKEGSFGNKGWPTFLSSYMVSKAAMNSYTRILAKKYPNFCINCVCPGFVKTDINRNTGFLSVEQGAASVVRLALLPNGSPSGLFYSRQEKSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B514</accession>
    <name>V7B514_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G129300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW12635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW12635"/>
        <property type="gene ID" value="PHAVU_008G129300g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="6513042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051363">
        <property type="entry name" value="RLR_Helicase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14074:SF16">
        <property type="entry name" value="ANTIVIRAL INNATE IMMUNE RESPONSE RECEPTOR RIG-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14074">
        <property type="entry name" value="HELICASE WITH DEATH DOMAIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="63"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW12635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="314" mass="36299" checksum="7CDE62D88D5AD0DD" modified="2014-02-19" version="1">MDFSLPLSVHGGEKRKSKESKLVEQRGKEAMEGALSMGTHTHTKQQKITRDVLPFARSCRLEALDKAIRENTIVYLETGSGKPLIAIMLLRRYAHHLRKPSPFTAVFVVPQVVLVSQQAETVKKHTDLKVGVYWGDMGVHFWDGGTWKQEMEKYEVLIMTPVILLNCLRHSFLELNMIKVLIMDECHHSRSRHPYACIMTEFYHPQLQYGSFALPESLVSLHLQLSRKLQILNHPCQNIQKLMTLMHSKAAESLSSSEFDSFSWGYSGDRVVRKGLFCLWLKLRWLQLLSGPRKRECAREHILEVAYQYYLFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5H2</accession>
    <name>V7B5H2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable purine permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G051100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the purine permeases (TC 2.A.7.14) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5H2"/>
    <dbReference type="STRING" id="3885.V7B5H2"/>
    <dbReference type="Gramene" id="ESW11686">
        <property type="protein sequence ID" value="ESW11686"/>
        <property type="gene ID" value="PHAVU_008G051100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRUH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASGEWMT"/>
    <dbReference type="OrthoDB" id="1907510at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005345">
        <property type="term" value="F:purine nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015211">
        <property type="term" value="F:purine nucleoside transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030182">
        <property type="entry name" value="PUP_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31376">
        <property type="entry name" value="OS09G0467300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31376:SF2">
        <property type="entry name" value="PURINE PERMEASE 11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16913">
        <property type="entry name" value="PUNUT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="61"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="162"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="262"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="331"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="354"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="43223" checksum="516B49E90EDA39F5" modified="2014-02-19" version="1">MTTYSPISVIHHHCVPFLSLSFFSRRPQPSSLLHMADSEEPMIAPGTISELAFNKYKRWQWWFLVALCIGFLIIGQCAAVILGRFYYDQGGNSKWMATLVQTAAFPLLFIPLYTIPAPAEASTSASPSIKIILLIYFVLGVLVAADNMMYSTGLLYLSASTYALICASQLAFNAVFSYFINAQKFTVLIINSTVILTLSASLLAVNEDSEEPSGLAKGKYIIGFLCTLGASALYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSLVATSVSVIGLFASGESHTLHGEMEGFGKGQVAYVMTLVWTAVAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLAIWGFVSYIYQNYLDDSKARHAQAVARSQNDTAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B794</accession>
    <name>V7B794_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Lipid-binding serum glycoprotein C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G216000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP (TC 1.C.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B794"/>
    <dbReference type="SMR" id="V7B794"/>
    <dbReference type="STRING" id="3885.V7B794"/>
    <dbReference type="Gramene" id="ESW13674">
        <property type="protein sequence ID" value="ESW13674"/>
        <property type="gene ID" value="PHAVU_008G216000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4160">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WKARKRF"/>
    <dbReference type="OrthoDB" id="10255543at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001530">
        <property type="term" value="F:lipopolysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903409">
        <property type="term" value="P:reactive oxygen species biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00025">
        <property type="entry name" value="BPI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00026">
        <property type="entry name" value="BPI2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.15.10.10:FF:000001">
        <property type="entry name" value="phospholipid transfer protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.15.10.10">
        <property type="entry name" value="Bactericidal permeability-increasing protein, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.15.20.10">
        <property type="entry name" value="Bactericidal permeability-increasing protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017943">
        <property type="entry name" value="Bactericidal_perm-incr_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030675">
        <property type="entry name" value="BPI/LBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045897">
        <property type="entry name" value="BPI/LBP_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001124">
        <property type="entry name" value="Lipid-bd_serum_glycop_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017942">
        <property type="entry name" value="Lipid-bd_serum_glycop_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46801:SF6">
        <property type="entry name" value="LIPID-BINDING SERUM GLYCOPROTEIN C-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46801">
        <property type="entry name" value="OS06G0309200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01273">
        <property type="entry name" value="LBP_BPI_CETP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02886">
        <property type="entry name" value="LBP_BPI_CETP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002417">
        <property type="entry name" value="Lipid_binding_protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00328">
        <property type="entry name" value="BPI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00329">
        <property type="entry name" value="BPI2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55394">
        <property type="entry name" value="Bactericidal permeability-increasing protein, BPI"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753982" description="Lipid-binding serum glycoprotein C-terminal domain-containing protein" evidence="3">
        <location>
            <begin position="20"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="domain" description="Lipid-binding serum glycoprotein N-terminal" evidence="4">
        <location>
            <begin position="33"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Lipid-binding serum glycoprotein C-terminal" evidence="5">
        <location>
            <begin position="277"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00060933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="491" mass="54396" checksum="4CF6864368705B08" modified="2014-02-19" version="1">MAPFLVLLLIVSSLNHGYAQFHPQNEAFISLSITQNGLDFVKELLVNKAISSLISLQLPNIEKTTKIPIVGNVYMVLSNITIYHIYVPSSHVKPGETGISITASGVTCNLSMNWYYSYSTWLVPVEISDKGRAEVQVKGMEVGLTLGLENQEGSLKLKLKDCGSNVKDISIKLDGGASWLYQGIVDAFEEKIGSAVENAITKKLTKGISRLDSYLKSLPKEVPVDDHTSLNVTFVNDVLLSDSFVGFETNGLFIERNPSLPILDLYNKILKLPILCTNSSKMMGITLDEAVFNSASALYYDAKFMHWIVDQIPDQSLLNTAGWRFIIPQLYKKYPNHDMNLEISLSSPPVVEISNHKAGANVFADMTIDVLEEDEVIPVACISLVIQGTGVFKISGNNLVGAVRLNDFQMSLKWSKIGNLRMYLIQPVVWTLIETVFLPHANTRLSKGLPLPILHGFILQNAEIILSTSRLAVCSDVAFTESNKRFSYFIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7M3</accession>
    <name>V7B7M3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Tropinone reductase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G115900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7M3"/>
    <dbReference type="SMR" id="V7B7M3"/>
    <dbReference type="STRING" id="3885.V7B7M3"/>
    <dbReference type="Gramene" id="ESW12471">
        <property type="protein sequence ID" value="ESW12471"/>
        <property type="gene ID" value="PHAVU_008G115900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFHNSSP"/>
    <dbReference type="OrthoDB" id="417891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045000">
        <property type="entry name" value="TR"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005559">
        <property type="entry name" value="PRK07231.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898:SF101">
        <property type="entry name" value="ENOYL-(ACYL CARRIER) REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898">
        <property type="entry name" value="TROPINONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="266" mass="28332" checksum="799F61508E54CAB2" modified="2014-02-19" version="1">MAETKLSCFKDKRWSLHGMTALVTGGTRGIGLAIAEELAEFGAVVHVCARNQHDIDRCVEEWNKKGFRITGSVCDVLSQDQRENLMKNVASIFQGKLNILVNNAGTASTKSVLDYTGEDVTTLMGTNFEACFHLCQLAHPLLKASGYGNIVFISSVAGLKAFPLCSAYAASKGALNQFTKNVALEWAKDNIRANTVAPGAVKTDLLDALMECADVNKNVVEAVVTESPAGRIGEPKDISGMVAFLCLPAASYITGQIITVDGGSII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9A8</accession>
    <name>V7B9A8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Malectin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G164600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9A8"/>
    <dbReference type="SMR" id="V7B9A8"/>
    <dbReference type="STRING" id="3885.V7B9A8"/>
    <dbReference type="Gramene" id="ESW13061">
        <property type="protein sequence ID" value="ESW13061"/>
        <property type="gene ID" value="PHAVU_008G164600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEDATWI"/>
    <dbReference type="OrthoDB" id="1382965at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF212">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754043" description="Malectin-like domain-containing protein" evidence="9">
        <location>
            <begin position="23"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="529"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="domain" description="Malectin-like" evidence="10">
        <location>
            <begin position="42"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW13061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="593" mass="66651" checksum="0861254CF7FEFB42" modified="2014-02-19" version="1">MERALQWIVVVAVCASSTIIHAADEAPHRKLASVDYSDVISIDCGLKEGYIDTTRIPYEDDDNEFGEIHSISDNSFQNQPQINKQLMSLRSFPEGKRNCYSLKPRQGKNKRYIVRGYFAYGNYDNKSKPPTFDLYIDVTNFTFIRFTVANTTRRVEAIYFTLTDTIDLCLVNTEQGVPFISLLELWPLGTASVYQDLLNFQTLDLLTRVTLGVSSADDQLLRYMDDNYGRSWLARALTRNEKEMKTTLGIDLDTVNNPYKLPTEVLNSAVSALRLSDSVNIWRNYNDTSFEYKVYLHFFDFEERVDSSEKRIMNVIINGFGEGVDDNVTRKISLSYNQLLTLPLTVKVGMGINNIFIKATPDSHLPPMLNAYEIYRVIPQSVSATHQDDVDAIKRIKDVYKISRINWQGDPCKPTNFTWDGLICNAMNPPRIISLNLSSSKLSGGIDISFSNLANLEILDLSNNQLVGEVPEFFAKLSQLKILNLSRNSLTGSIPDALIAKSESNSLQLSLDGNIGICQIGSCKKKKNIVALVATIIASIVVSIIIVGIVMAIRRSLRKNGGISSTSKKEQLKLKNQTFSYSELHNITNGFKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BA95</accession>
    <name>V7BA95_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G225400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the syntaxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BA95"/>
    <dbReference type="STRING" id="3885.V7BA95"/>
    <dbReference type="Gramene" id="ESW13778">
        <property type="protein sequence ID" value="ESW13778"/>
        <property type="gene ID" value="PHAVU_008G225400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0812">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTPSQQM"/>
    <dbReference type="OrthoDB" id="421009at2759"/>
    <dbReference type="PhylomeDB" id="V7BA95"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031201">
        <property type="term" value="C:SNARE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005484">
        <property type="term" value="F:SNAP receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000149">
        <property type="term" value="F:SNARE binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048278">
        <property type="term" value="P:vesicle docking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006906">
        <property type="term" value="P:vesicle fusion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd15844">
        <property type="entry name" value="SNARE_syntaxin5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045242">
        <property type="entry name" value="Syntaxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006012">
        <property type="entry name" value="Syntaxin/epimorphin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957:SF228">
        <property type="entry name" value="SYNTAXIN-31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05739">
        <property type="entry name" value="SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00914">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="315"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="5">
        <location>
            <begin position="244"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="19"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="160"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="165"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="37504" checksum="1211E2D85A251AB4" modified="2014-02-19" version="1">MASSYRDRTSEFRLLSETLKKIGGGTSPSRQPETAPSTSQDSYSRSEFNRKASRIGLGIHETSQKVARLAQLARKSSMFNDPAVEIQELTALIKNEITALNSALSDLQTIQNMDMADGSYSQDRIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHESRKQIFSKNASRENPFQHQPKPATEPPPWSNSLNAYENLQQESALPSNGAPVSNQLRRRLAVDNTPSQQMEMSMVQQVVPRQENYTQSRSTALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNRISSNRWLLIKIFAVLILFLLIFIFFVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBG2</accession>
    <name>V7BBG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-CH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G227700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBG2"/>
    <dbReference type="Gramene" id="ESW13806">
        <property type="protein sequence ID" value="ESW13806"/>
        <property type="gene ID" value="PHAVU_008G227700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1609">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWSETND"/>
    <dbReference type="OrthoDB" id="1912066at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011016">
        <property type="entry name" value="Znf_RING-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46214:SF30">
        <property type="entry name" value="OS01G0850200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46214">
        <property type="entry name" value="ZINC FINGER, RING-CH-TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12906">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00744">
        <property type="entry name" value="RINGv"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51292">
        <property type="entry name" value="ZF_RING_CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="193"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="RING-CH-type" evidence="6">
        <location>
            <begin position="86"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="23637" checksum="32F2DACA972D6CC6" modified="2014-02-19" version="1">MLVTTEDKSHVVVVVDIHSNGCCHRSSAADEGCSDATDHSHEGQSSSHDPGTEIVGVCEKERGSSASECSVEVDLEEGSVLEVKVHLDNVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIARNVAGAIEIQMTEQWNEANDASTVPPSGTAPPTETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBU1</accession>
    <name>V7BBU1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Hcy-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G0603001g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBU1"/>
    <dbReference type="STRING" id="3885.V7BBU1"/>
    <dbReference type="Gramene" id="ESW15289">
        <property type="protein sequence ID" value="ESW15289"/>
        <property type="gene ID" value="PHAVU_007G0603001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1579">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WISAVFP"/>
    <dbReference type="OrthoDB" id="261426at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008898">
        <property type="term" value="F:S-adenosylmethionine-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033528">
        <property type="term" value="P:S-methylmethionine cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.330:FF:000002">
        <property type="entry name" value="Homocysteine S-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="entry name" value="Homocysteine-binding-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051486">
        <property type="entry name" value="Hcy_S-methyltransferase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF007020">
        <property type="entry name" value="PRK09485.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46015:SF10">
        <property type="entry name" value="HOMOCYSTEINE S-METHYLTRANSFERASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46015">
        <property type="entry name" value="ZGC:172121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="Homocysteine S-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="6">
        <location>
            <begin position="1"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="282" mass="30874" checksum="29EBB690465E7A18" modified="2014-02-19" version="1" fragment="single">VHLDYLDAGANIILTASYQATVQGFEAKGFSREEGVTMLKRSVEIAREAREIYHDRCTKDSSDFVRNERFRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIPNKLEAQAYAELLDEEGIETPAWFSFSCKDECNVVSGDSIFECASIADSCRQVAAVGVNCTAPRFIHGLISSIKKATSKPVLVYPNSGETYIAESNQWVKSSGLAEDDFVPYIGKWRDAGASLFGGCCRTTPNTIRGIAEAIYGKVQDKCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCL2</accession>
    <name>V7BCL2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 13">Laccase</fullName>
            <ecNumber evidence="4 13">1.10.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Benzenediol:oxygen oxidoreductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Diphenol oxidase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Urishiol oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G086400g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Lignin degradation and detoxification of lignin-derived products.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>4 hydroquinone + O2 = 4 benzosemiquinone + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11276"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:17594"/>
            <dbReference type="ChEBI" id="CHEBI:17977"/>
            <dbReference type="EC" id="1.10.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
        <text evidence="13">Binds 4 Cu cations per monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Secreted</location>
            <location evidence="2 13">Extracellular space</location>
            <location evidence="2 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the multicopper oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.2" evidence="4 13"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCL2"/>
    <dbReference type="SMR" id="V7BCL2"/>
    <dbReference type="Gramene" id="ESW15607">
        <property type="protein sequence ID" value="ESW15607"/>
        <property type="gene ID" value="PHAVU_007G086400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1263">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KMIVHDR"/>
    <dbReference type="OrthoDB" id="2121828at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052716">
        <property type="term" value="F:hydroquinone:oxygen oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046274">
        <property type="term" value="P:lignin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13849">
        <property type="entry name" value="CuRO_1_LCC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13875">
        <property type="entry name" value="CuRO_2_LCC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13897">
        <property type="entry name" value="CuRO_3_LCC_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000049">
        <property type="entry name" value="Laccase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001117">
        <property type="entry name" value="Cu-oxidase_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033138">
        <property type="entry name" value="Cu_oxidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034288">
        <property type="entry name" value="CuRO_1_LCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034285">
        <property type="entry name" value="CuRO_2_LCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034289">
        <property type="entry name" value="CuRO_3_LCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017761">
        <property type="entry name" value="Laccase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03389">
        <property type="entry name" value="laccase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709:SF443">
        <property type="entry name" value="LACCASE-15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="MULTI-COPPER OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00394">
        <property type="entry name" value="Cu-oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00079">
        <property type="entry name" value="MULTICOPPER_OXIDASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="10 13" id="KW-0186">Copper</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12 13" id="KW-0439">Lignin degradation</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 13" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148987" description="Laccase" evidence="13">
        <location>
            <begin position="26"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="16">
        <location>
            <begin position="34"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="14">
        <location>
            <begin position="161"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="15">
        <location>
            <begin position="435"/>
            <end position="550"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU361119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW15607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="567" mass="63717" checksum="CCDFA185D7FE286C" modified="2014-02-19" version="1">MKMLCSKNIFLQILWCFSLITLSSQTQNHYSFVVREAQYTRLCSTKSILTVNGNFPGPTIRVNRGDTIYVDVYNEGNYNITIHWHGVKQPRNPWTDGPSYITQCPIQPGRKFRQKLVFSFEEGTIWWHAHSEWIRATVYGAIYVYPTKNTPYPFPQPDAEIPIIFGEWWMNDVNEVFRQSFETGGAPNISDALTINGQPGDLFPCSMPETFKLNVEQGRTYHLRVINAAMNLILFFSVSQHNLTVVGADAVYTKPFTRDYICISPGQAMDVLLHANQEPNHYYLAARAYSTGVGVAFDNTTTTARIEYSGNYTPPSSPSLPNLPNFNDTQAALDFITNLRGLPERYPNPVPTNITTQIVTTISVNTLPCPNGRNDCQGPNGTLFSASMNNISFQTPNIDILKAYYNNINGVYETGFPRFPPFMFNFTADFLPLTLNIPQKGTRVNVLNYGSTVEIVFQGTNVVGGVDHPIHLHGFSFHVIGYGLGNFNQSTDPMNFNLVDPPYLNTVIVPINGWAAIRFVAVNPGVWFMHCHLERHQSWGMQTVFIVKNGNSSKQILPPPPPDMPPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCX8</accession>
    <name>V7BCX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF7733 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G072500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCX8"/>
    <dbReference type="Gramene" id="ESW15435">
        <property type="protein sequence ID" value="ESW15435"/>
        <property type="gene ID" value="PHAVU_007G072500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU47">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEKRDQF"/>
    <dbReference type="OrthoDB" id="1906194at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056635">
        <property type="entry name" value="DUF7733"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33829">
        <property type="entry name" value="OSJNBA0044M19.10 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33829:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24867">
        <property type="entry name" value="DUF7733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="208"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7733" evidence="3">
        <location>
            <begin position="44"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF24867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="245" mass="27418" checksum="8DD916E0AEDA2ED2" modified="2014-02-19" version="1">MSGGVGPTGSDISLPREEQVDHKEHQEHVPQKAIITPSKSGFPSFRHLNCLAVVIVLSASGMIGPQDFVFVAFSVVYVLFLSKVAFPSLHSSKEGPIFNPQNKMFALYIFIAAIIGLFAPIAYILDGIYEGDKEGIKAAAPHVFLLASQVFMEGVTYSGRYSIPIRAFVPIFYNSRRIFTIVDWLRSEINKVNEEHSGSARRIYVGRVLAVANMAFWCYNLFGFLLPVYLPRVFKLYYSAHKDKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDD6</accession>
    <name>V7BDD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 14">Pyruvate kinase</fullName>
            <ecNumber evidence="4 14">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G106100g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13 14">
            <text>pyruvate + ATP = phosphoenolpyruvate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 14">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the pyruvate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 14"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDD6"/>
    <dbReference type="SMR" id="V7BDD6"/>
    <dbReference type="STRING" id="3885.V7BDD6"/>
    <dbReference type="Gramene" id="ESW15834">
        <property type="protein sequence ID" value="ESW15834"/>
        <property type="gene ID" value="PHAVU_007G106100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2323">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MGPELQI"/>
    <dbReference type="OrthoDB" id="108365at2759"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.33.10:FF:000004">
        <property type="entry name" value="Pyruvate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1380.20:FF:000006">
        <property type="entry name" value="Pyruvate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="entry name" value="Phosphoenolpyruvate-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.20">
        <property type="entry name" value="Pyruvate kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015795">
        <property type="entry name" value="Pyrv_Knase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036918">
        <property type="entry name" value="Pyrv_Knase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01064">
        <property type="entry name" value="pyruv_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PYRUVATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02887">
        <property type="entry name" value="PK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52935">
        <property type="entry name" value="PK C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 14" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate kinase barrel" evidence="15">
        <location>
            <begin position="30"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="domain" description="Pyruvate kinase C-terminal" evidence="16">
        <location>
            <begin position="394"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW15834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="526" mass="57825" checksum="DAB2E4CA606CE8D3" modified="2014-02-19" version="1">MQSSPLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPKSRSVDIISRCLDSGMSVARFDFSWGDPEYHQETLENLRAAIKSTKKLCAVMLDTMGPELQIVNTTDQPITLEEDTLVVLTPDQSKEASSNLLPLNFSGISKAVKKGDTIFIGKYLFTGSETASVWLEVSEVDGDDVACLVRNTATLSGPLFTVHISQIHIDLPSLTDKDKEVISTWGVRNNIDILSLYTRQAEDIRHAREFLSKLGDLKQTHIYAKIENIEGLKHFDEILREADGIILARGNLGIELPPEKVFLFQKAAIYKCNMVGKPVVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGQYPVETISTVGKICAEAEKVHNQDLYFKKAVKYVGEQMSHLESIASSAVRAAIKVRASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAESKSGANESILKVALDHGKAFGIIKPHDRVVVCQKVGDSSVVKIIELED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE57</accession>
    <name>V7BE57_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MHD1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G130300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE57"/>
    <dbReference type="SMR" id="V7BE57"/>
    <dbReference type="STRING" id="3885.V7BE57"/>
    <dbReference type="Gramene" id="ESW16112">
        <property type="protein sequence ID" value="ESW16112"/>
        <property type="gene ID" value="PHAVU_007G130300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWTE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DAHEYQI"/>
    <dbReference type="OrthoDB" id="2015333at2759"/>
    <dbReference type="PhylomeDB" id="V7BE57"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014770">
        <property type="entry name" value="Munc13_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014772">
        <property type="entry name" value="Munc13_dom-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057984">
        <property type="entry name" value="PATROL1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008528">
        <property type="entry name" value="unc-13_homologue"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31280:SF18">
        <property type="entry name" value="DUF810 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31280">
        <property type="entry name" value="PROTEIN UNC-13 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25761">
        <property type="entry name" value="TPR_PATROL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51258">
        <property type="entry name" value="MHD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51259">
        <property type="entry name" value="MHD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MHD1" evidence="2">
        <location>
            <begin position="557"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="domain" description="MHD2" evidence="3">
        <location>
            <begin position="840"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1013" mass="113377" checksum="0AD63EE52BDC04E8" modified="2014-02-19" version="1">MGHHTRRESYPSATSSRLDYHLHSQRRLDTGTLSLPFGKLYGLDDDQVRETAYEIFFTSCRSSPGFGGRHALTFYSNHESNGSGGEGGKPSQVVTKPTSRVKKMLGLRMVKRSPSRRMVSNGGSSTPSSPVGAPGSPLSNSVPSFRPRRPMTAAEIMRQQMRVTEHDDNRLRKTLMRTLVGQMGRRAETIIIPLELIRHLKPSEFSDSHEYHNWQIRQLKVLEAGLLLHPLIPLEKTSTFATRLRDIVTNGESKPIDAGKNSDTMRTLCNSVVSLSWRTDNGTPADVCHWADGFPFNIHLYTSLLQSIFDVRDETLVLDEVDELLELMKKTWSSLGITLPIHNVCFAWVLFKQYVSTGQIEPDLLCASHGMLNEVENDAKREKESSYVKILSSVLTSMQGWAEKRLLNYHEYFQRGNAGQIENLVPVVLTALKILGEDLTLTDGGRGEKGGMAIVDFRDRIDSYIRSSMKHSFDKVLESVNAKSAESERRQEFSEVLLQMVQETEALMLKERHHFSPILKKWHSTAGAVAAMVLHSCFGKMLKRYVSEVSSLTTESVQVLQKSGKLEKVIVQMMVEDSSDCDDGGKTVIREMAPYDVDSVILSLLGKWIDDSLLKGKECLQAAKETETWNAKSKSESYAESAAELMKLATTTVEEFFQVPIAITEDLVQDLADGLENLFLDYMKFVASCGSKQSYIPMLPPLTRCNSDSTFTKLWKRAAPCSAGFDAHLRHINGRHEGHNPRPSTSRGTQRLYIRLNTLHYLLSKIHSLERTITLNPGVVPSNRLRFASNRKSSGSFFETVNLSIPVACQRVSEVAAFRLVFHDSTSVMYDSLYVGGVARGQMRAALRILKQNLTVMTTSITDRAQPLALKEVMKASYDAFLMVLLSGGNSRVFSRYDHEVIEEDFENLKRVFSNSVEGLIPENVVDGEAAVVEGVITLMSQSSEQLIEDLSIMSCESSGIGLIGNGQKLPMPPTTGKWNRSDPNTILRVLCHRNERAANLFLKKTFQLAKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BET9</accession>
    <name>V7BET9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">CCHC-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G070700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BET9"/>
    <dbReference type="STRING" id="3885.V7BET9"/>
    <dbReference type="Gramene" id="ESW15413">
        <property type="protein sequence ID" value="ESW15413"/>
        <property type="gene ID" value="PHAVU_007G070700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4400">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NKNDETM"/>
    <dbReference type="OrthoDB" id="3863715at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.60.10:FF:000091">
        <property type="entry name" value="Zinc finger CCHC-type-containing 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.60.10">
        <property type="entry name" value="Zinc finger, CCHC-type"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001878">
        <property type="entry name" value="Znf_CCHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036875">
        <property type="entry name" value="Znf_CCHC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47798:SF2">
        <property type="entry name" value="CCHC-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47798">
        <property type="entry name" value="OS04G0555800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00098">
        <property type="entry name" value="zf-CCHC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00343">
        <property type="entry name" value="ZnF_C2HC"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57756">
        <property type="entry name" value="Retrovirus zinc finger-like domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50158">
        <property type="entry name" value="ZF_CCHC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CCHC-type" evidence="7">
        <location>
            <begin position="97"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="CCHC-type" evidence="7">
        <location>
            <begin position="123"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="CCHC-type" evidence="7">
        <location>
            <begin position="150"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="224"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="33"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="266" mass="29758" checksum="236813BA2928EBAD" modified="2014-02-19" version="1">MVSQRQRLARKRFKSENPELFPKAEPTPPKDPNKKKKKKKKSSAFKRKAESKPGSRNRHPLRVPGMKPGESCFICRAKDHIAKLCPEKTEWEKNKICLRCRRRGHRAKNCPEVQDAAKDVKYCYNCGETGHSLSLCPHPLQEGGTQFAECFVCNQQGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGRQGSVAANGPFGRSMRIEERPRGKVTKFISGDDIDDDFMADDTHSADNNKSANSKDGNVKPKKKEPKVVIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFP0</accession>
    <name>V7BFP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Mediator of RNA polymerase II transcription subunit 31</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G063000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the Mediator complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the Mediator complex subunit 31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFP0"/>
    <dbReference type="SMR" id="V7BFP0"/>
    <dbReference type="STRING" id="3885.V7BFP0"/>
    <dbReference type="Gramene" id="ESW15321">
        <property type="protein sequence ID" value="ESW15321"/>
        <property type="gene ID" value="PHAVU_007G063000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4086">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PSPMQYS"/>
    <dbReference type="OrthoDB" id="10257739at2759"/>
    <dbReference type="PhylomeDB" id="V7BFP0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016592">
        <property type="term" value="C:mediator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.1340:FF:000001">
        <property type="entry name" value="Mediator of RNA polymerase II transcription subunit 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1340">
        <property type="entry name" value="Mediator of RNA polymerase II, submodule Med31 (Soh1)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038089">
        <property type="entry name" value="Med31_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008831">
        <property type="entry name" value="Mediator_Med31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13186">
        <property type="entry name" value="MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05669">
        <property type="entry name" value="Med31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0010">Activator</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="134"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="8"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23745" checksum="F3919C910C0E5534" modified="2014-02-19" version="1">MASKNESDNSTDTSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTTQAPVSALPPVPATSVAVTSTPAQAPSPMPYGMPPGSGLAKNDMRNPTVDNRRKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFW7</accession>
    <name>V7BFW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Carbohydrate kinase PfkB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G178600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFW7"/>
    <dbReference type="SMR" id="V7BFW7"/>
    <dbReference type="STRING" id="3885.V7BFW7"/>
    <dbReference type="Gramene" id="ESW16702">
        <property type="protein sequence ID" value="ESW16702"/>
        <property type="gene ID" value="PHAVU_007G178600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2855">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCAPAFK"/>
    <dbReference type="OrthoDB" id="415590at2759"/>
    <dbReference type="PhylomeDB" id="V7BFW7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019206">
        <property type="term" value="F:nucleoside kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006190">
        <property type="term" value="P:inosine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1900542">
        <property type="term" value="P:regulation of purine nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47826">
        <property type="entry name" value="OS03G0164700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47826:SF1">
        <property type="entry name" value="OS03G0164700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="Ribokinase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carbohydrate kinase PfkB" evidence="1">
        <location>
            <begin position="109"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="470" mass="50401" checksum="6F78258E1BE795C4" modified="2014-02-19" version="1">MPFSVTPETLASPISHGPSSFLSISKPPCFTLRPINRAFACKSLEIAVPSLSLHSNVPPNSKHVDVATLSNLCVDIVLNVPQLPPPSPVQRKAFMDSLAQSPPDKKYWEAGGNCNMAIAAARLGLNCISIGHVGNEIYGKFLSDVLHDEGIGLVGILTNENSNNIIDSSSSGSASYDTLLCWVLVDPLQRHGFCSRADFSKEPAFHWMSKLSSEVKIAIENSKVLFCNGYGFDELSPGAILSAMEYAVEVGTSIFFDPGPRGKELSTGSPDEQRALNQLLRMSDVLLLTSDEAESLAGIEDPILAGQEFLKRGIRTKWVIVKMGSKGSILITASNIACAPGFKVNVIDTVGCGDSFVAAIAYGFIHNMPLVNTLAIANAVGAATAMGCGAGRNVAKLEKVVEILRSSNLSEDDEFWFDILEKNVVSQEITYLSNVMNGNRNHLNLVSFDNVASELLPRLELPSTVGNVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHC3</accession>
    <name>V7BHC3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G227900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHC3"/>
    <dbReference type="SMR" id="V7BHC3"/>
    <dbReference type="STRING" id="3885.V7BHC3"/>
    <dbReference type="Gramene" id="ESW17299">
        <property type="protein sequence ID" value="ESW17299"/>
        <property type="gene ID" value="PHAVU_007G227900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0I3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRTYEEN"/>
    <dbReference type="OrthoDB" id="434972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1780">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43009:SF6">
        <property type="entry name" value="HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43009">
        <property type="entry name" value="HOMOGENTISATE SOLANESYLTRANSFERASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="329"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="355"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="409" mass="45924" checksum="D1EA3A5D04E3DE9D" modified="2014-02-19" version="1">MDRAHAISSPNVSSLISGANLCSRKLSSNSIYYASSRGSKASQNKIKAQIQYNPLRFQQSPFNHHFKSIEGGRTYEENNTKYIVKAVTVPSSESESQPSISKNTVDSVKNFLTVLYQFIYPYATYGRLSAAISGSLIAVQNLSDISPLFLVGLFQALFSHLFMDLYVNGVNQVFDFEIDKINKPYLPLASGKLSFRNCAFIVASSAILGFGVTLMIGSPALTLNLLSTFILWTGYSANVPFLRWKRYPVLAALFMFLSWTFIFPLSYFLHMQTFVFKRPVVFPRSLIVSMVFNAFYSIGLALAKDIPDIEGDKQHGIDSFSIRLGQKKVFWISFFLYEMAFGVAFLAGATSSSPLWIKIVTSLGSFVLASILWYQTKYVDVTDPASTRSSYKFNWKLMVVSFFLLPLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHN9</accession>
    <name>V7BHN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA mismatch repair protein MutS-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G2329001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHN9"/>
    <dbReference type="STRING" id="3885.V7BHN9"/>
    <dbReference type="Gramene" id="ESW17357">
        <property type="protein sequence ID" value="ESW17357"/>
        <property type="gene ID" value="PHAVU_007G2329001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0217">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISWWKER"/>
    <dbReference type="OrthoDB" id="10252754at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1170.10:FF:000005">
        <property type="entry name" value="DNA mismatch repair protein MSH1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1170.10">
        <property type="entry name" value="DNA repair protein MutS, domain I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007695">
        <property type="entry name" value="DNA_mismatch_repair_MutS-lik_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016151">
        <property type="entry name" value="DNA_mismatch_repair_MutS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053276">
        <property type="entry name" value="MtDNA_mismatch_repair_MutS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48448">
        <property type="entry name" value="MUTL PROTEIN ISOFORM 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48448:SF1">
        <property type="entry name" value="MUTL PROTEIN ISOFORM 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01624">
        <property type="entry name" value="MutS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55271">
        <property type="entry name" value="DNA repair protein MutS, domain I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA mismatch repair protein MutS-like N-terminal" evidence="1">
        <location>
            <begin position="132"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="252" mass="28632" checksum="A2AF3FBA2549DABE" modified="2014-02-19" version="1" fragment="single">MYRAVTRNVAVFLPRCRSLSHFSHSLFPFFISSLPSRFLRINGRVKNVSTYMDNNRVSRGSSRTTKKPKVPNNVLDDKDLPHISWWKERLQMCKKFSTVQLIQRLEFSNLLGLDSKLKNGSVKEGTLNWEMLQFKSKFPRQVLLCRVGEFYEAWGIDACVLVEYAGLNPCGGLQSDSVPRAGCPVVNLRQTLDDLTQNGYSVCIIEEVQGPTQARSRKRRFISGHAHPGNPYVYGLAAVDHDLNFPEPMPVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK54</accession>
    <name>V7BK54_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G197700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DRM1/ARP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK54"/>
    <dbReference type="STRING" id="3885.V7BK54"/>
    <dbReference type="Gramene" id="ESW16951">
        <property type="protein sequence ID" value="ESW16951"/>
        <property type="gene ID" value="PHAVU_007G197700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S6R7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LTMCECE"/>
    <dbReference type="OrthoDB" id="1912652at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008406">
        <property type="entry name" value="DRM/ARP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33565">
        <property type="entry name" value="DORMANCY-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33565:SF1">
        <property type="entry name" value="DORMANCY-ASSOCIATED PROTEIN HOMOLOG 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05564">
        <property type="entry name" value="Auxin_repressed"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="72"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="98"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="114"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="127" mass="13653" checksum="0094401B2FB0F45D" modified="2014-02-19" version="1">MGLLDHLWDDTVAGPPPENGLGKLRKHHTFAFRPNSGKESDGGSLKSYGEDSAEDAMRVTRSIMIVKPPGYQSQSGSAPASPAGSTPPVSPFSGATRESFRFRRRSTSDAFEKNGQNRPNSSSPFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKQ6</accession>
    <name>V7BKQ6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G0526002g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKQ6"/>
    <dbReference type="STRING" id="3885.V7BKQ6"/>
    <dbReference type="Gramene" id="ESW18574">
        <property type="protein sequence ID" value="ESW18574"/>
        <property type="gene ID" value="PHAVU_006G0526002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWVVERI"/>
    <dbReference type="OrthoDB" id="598235at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098542">
        <property type="term" value="P:defense response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23155">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23155:SF1052">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RPM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="NB-ARC" evidence="4">
        <location>
            <begin position="48"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="5">
        <location>
            <begin position="305"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="6">
        <location>
            <begin position="443"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="535"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="535" mass="61647" checksum="A8C7B8C38344287B" modified="2014-02-19" version="1" fragment="single">RKVKGIKSKNSQEPRSSTSGENKWNSLHYHVDDLETQEEVVGLVGPTAKLRGWLKEGQEERTVITVVGIPGVGKTTLAKHVFDKVHDDFVCHTMIRVHRRYTVKGLLINMILKLCKERKENPPSEISNMDEDSLKKEVRDRLRKKRYVVLFDDVWNENFWDDIQSVLIDDKNKSRIIITTRNVKVADFCKTSSIVQVYNHDKPLSEEESLKLLHKKARYGSEGHCHDELKNVSLEILRKCKGLPLAIVVVGGLLSQLKDESASEWRKFCENFKRNRNLNGIREVIGWSYDDLPINLRSCLLYFGMYPEGYEIKSDRLVRQWVAERFVTPDTPKSLEEVANEYLLGLVQRNLVQVSSISFEDKFIKCRVHDLIHDMIRAKVKNTCFGEYIGGGGDDQSESSGLVRRLTIATNDVIRSTETSLIRSIIIIPEKQEESWFVEFESKILKNYMPLKVLDYEDSGLPCVPKMLGTLIHPRYLSFRGTLIESLPKSIGKLLNLETLDIRDTKVCKIPKEITKLRKLRYLLTPDRASSSIKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLC7</accession>
    <name>V7BLC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Defensin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G067400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLC7"/>
    <dbReference type="SMR" id="V7BLC7"/>
    <dbReference type="Gramene" id="ESW18752">
        <property type="protein sequence ID" value="ESW18752"/>
        <property type="gene ID" value="PHAVU_006G067400g"/>
    </dbReference>
    <dbReference type="OMA" id="CKKYCLN"/>
    <dbReference type="OrthoDB" id="1406848at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755083" description="Defensin-like protein" evidence="1">
        <location>
            <begin position="27"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="73" mass="8014" checksum="B20F29D1498889AA" modified="2014-02-19" version="1">MAKASLLFPCLIVLFLVALETGFVNACDYKCGSPSDCKSLQCFRPGCKKYCLNGCCLCDCHKLTRDQNQNGNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMB7</accession>
    <name>V7BMB7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G097800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WD repeat WDR48 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMB7"/>
    <dbReference type="SMR" id="V7BMB7"/>
    <dbReference type="STRING" id="3885.V7BMB7"/>
    <dbReference type="Gramene" id="ESW19117">
        <property type="protein sequence ID" value="ESW19117"/>
        <property type="gene ID" value="PHAVU_006G097800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0308">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MISVRNW"/>
    <dbReference type="OrthoDB" id="2421129at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd17041">
        <property type="entry name" value="Ubl_WDR48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:003673">
        <property type="entry name" value="Transducin/WD40 repeat-like superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001545">
        <property type="entry name" value="WD repeat-containing protein 48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051246">
        <property type="entry name" value="WDR48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021772">
        <property type="entry name" value="WDR48/Bun107"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19862">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19862:SF14">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11816">
        <property type="entry name" value="DUF3337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="119"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="211"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="253"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW19117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="761" mass="83561" checksum="E07E870326244B1D" modified="2014-02-19" version="1">MHRVGSASNGNNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTSDGSDYLFTGSRDGRLKRWVLAVDRATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWNALSLGTCTRTLRQHSDYVTCLASAGKNSNIVASGGLGGEVFIWDIEAAATPVSKSNDTTVDESSNGINGSGNLLPLTSLRTVNSSTNMSMNTNQSQGYIPTAAKGHKDSVYALATNESGTILVSGGTEKVVRVWDTRTGAKTLKLRGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDIGQQRCVHSYAVHIDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPILQLALHDDSIWVASTDSSVHRWPTEGCNPEKIFQRGNSFLAGNLSFSRARVSLEGSTPVPVYKEPTLTILGTPAIVQHEILNNKRHVLTKDASGSVKLWEITKGDVIEDYGKVSFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYLADLNIVGKPEDDKVNLARETLKGLLAHWLRKRKQRTGSPAPANGELLSGKDIASRSLNHSRIEADGSSENDTMVYPPFEFSVTSPPSIITEGSHGGPWRKKITDLDGTKDEKDFPWWCLDCVLNNRLPTRENTKCSFYLQPCEGSSVQIVTQGKLSAPRILRIHKVINYVVEKMVLDKPLDSISADGSFAPGLTGSQSQHQTVGDGSFRSGFKPWLKLRPSIEILCNNQVLSPEMSLATVRAYIWKKSEDLVLNYRLVQSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN22</accession>
    <name>V7BN22_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G116900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN22"/>
    <dbReference type="Gramene" id="ESW19347">
        <property type="protein sequence ID" value="ESW19347"/>
        <property type="gene ID" value="PHAVU_006G116900g"/>
    </dbReference>
    <dbReference type="OMA" id="SNHYGER"/>
    <dbReference type="PhylomeDB" id="V7BN22"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="17"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="83" mass="9133" checksum="EA24565FE2B542CE" modified="2014-02-19" version="1">MAYRMRKPFSNDGTFDSFNNHGNGNQNFSNAKINSGANSGDRNRYNSSNHYGERVINNSGTFNGNGNGGYIEGGFNSSTNNYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN66</accession>
    <name>V7BN66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G124900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN66"/>
    <dbReference type="STRING" id="3885.V7BN66"/>
    <dbReference type="Gramene" id="ESW19434">
        <property type="protein sequence ID" value="ESW19434"/>
        <property type="gene ID" value="PHAVU_006G124900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVY1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PCLIITA"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901696">
        <property type="term" value="P:cannabinoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.43.10:FF:000004">
        <property type="entry name" value="Berberine bridge enzyme-like 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754718" description="FAD-binding PCMH-type domain-containing protein" evidence="8">
        <location>
            <begin position="30"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="9">
        <location>
            <begin position="79"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="262" mass="29361" checksum="32EB7386CCB81147" modified="2014-02-19" version="1">MGALSLHRIQLSIFPIFVFLSLVWSSSFANSLHDNFLGCLVNHSEPSHPITSAIFTPNNTSFSSVLQAYIRNLCFNTSTTRKPFLIVTPFHVSHVQAVVLCAKKHNLLIKIRSGGHDYEGLSYVASKPFFILDMFHLRSIRVEIDTETAWVEAGATLGEVYYRIGRLLDRKSMGEDLFWAITGGGGSSFGVVLAYKIKLLVRVPEIVTVFRVRRTLEQNATDIAGTPLEILLDRQPQSPVNYLKRKSDYVQKPISKDGFEGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNP1</accession>
    <name>V7BNP1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_006G020700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNP1"/>
    <dbReference type="SMR" id="V7BNP1"/>
    <dbReference type="STRING" id="3885.V7BNP1"/>
    <dbReference type="Gramene" id="ESW18191">
        <property type="protein sequence ID" value="ESW18191"/>
        <property type="gene ID" value="PHAVU_006G020700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WVFKGWI"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7BNP1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000095">
        <property type="entry name" value="protein STRUBBELIG-RECEPTOR FAMILY 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000228">
        <property type="entry name" value="Serine/threonine-protein kinase BIK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050823">
        <property type="entry name" value="Plant_Ser_Thr_Prot_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45621">
        <property type="entry name" value="OS01G0588500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="72"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="358"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="30"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="372"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW18191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="43598" checksum="89DC1856EEE18BA9" modified="2014-02-19" version="1">MGNTCAKGKPIAHVSSSNLSGSKRPVSKPRQYSNSSVQNQAPKASESNITASISSSLKSFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYGPTRPGTGIVVAIKNLKPESFQGHKEWLAEVSYLGQLQHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVIRVNIAISVARGLTFLHSLDQNVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLIDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLNSSNSFTRTPPTPESHATKNSDGHSQKLIRKSIDECNQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ12</accession>
    <name>V7BQ12_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_006G178800g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ12"/>
    <dbReference type="SMR" id="V7BQ12"/>
    <dbReference type="Gramene" id="ESW20072">
        <property type="protein sequence ID" value="ESW20072"/>
        <property type="gene ID" value="PHAVU_006G178800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KYFIRRQ"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044600">
        <property type="entry name" value="ATL1/ATL16-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913:SF1">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="17">
        <location>
            <begin position="105"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="206"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW20072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="25383" checksum="5449DBF927BE959C" modified="2014-02-19" version="1">MGSKEKHDEESLSVGLKLMLAAALSLLSMILFIIIFHFSVKYFIRRQQRRRQNDLLYQITTQITPIDVSSVEPCNSGLEPSIIASLPKLLYSQTEQFKKGEVIECSVCLATITEDAVTRVLPNCKHIFHVDCVDKWFSSNTTCPICRTVADPKVAPEEHDHLATRVHQVQPTAPPAVSGDEVEDGDEMEKVGCSGLRIGSFHRMVSNRERSGRTQSCDESTIDIGRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQG2</accession>
    <name>V7BQG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hydroxyproline-rich glycoprotein family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G0732001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQG2"/>
    <dbReference type="STRING" id="3885.V7BQG2"/>
    <dbReference type="Gramene" id="ESW18821">
        <property type="protein sequence ID" value="ESW18821"/>
        <property type="gene ID" value="PHAVU_006G0732001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT1Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEPEYIM"/>
    <dbReference type="OrthoDB" id="1932806at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47911">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47911:SF1">
        <property type="entry name" value="OS06G0664400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="185"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="198"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="232"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="255"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="471" mass="51120" checksum="28E43221A637354D" modified="2014-02-19" version="1" fragment="single">MRGSIGIRISNHTISNASRRTVVAFSTSSGFGDGGRGRGRGGSLPGSGPFNFNERAPGKLNSSEPKSDTAESPIPPGSAHGHGRGKPMPPSGVPFPSFLSSINQPPAGRGRATTVPQPQNDFHSPAGRGRATVPEPLNAFEPNDLGPPGPKKPIFFRRKDSVSPTVTDGFPIDVEHVNKLPGTIPGVLSGLGRGKPMKQPEPETRVTEENRHLRPPRAPGAAASDTLPERQPMPRRDDAVRNARNFLSQGEDDGSGTGRGRGFRGRGGLGRGRGRGRGRGIGRGGFRGRDINERLGRFMDADDSDVAGLYVGDDADGERLAKKFGPEIMNQLTEGFEEVAGRVLPSPLEDEYLDALDINYAIEFEPEYLVEFDNPDIDEKEPIPLRDALEKMKPFLMAYEGIQSQEEWEEIMEETMARVPLLKKIVDHYSGPDRVTAKKQQEELERVAKTLPESAPSSVKQFTNRAVVSLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQP8</accession>
    <name>V7BQP8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glabrous enhancer-binding protein-like DBD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G196300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GeBP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQP8"/>
    <dbReference type="STRING" id="3885.V7BQP8"/>
    <dbReference type="Gramene" id="ESW20289">
        <property type="protein sequence ID" value="ESW20289"/>
        <property type="gene ID" value="PHAVU_006G196300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RQE9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIAMANG"/>
    <dbReference type="OrthoDB" id="661680at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007592">
        <property type="entry name" value="GEBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053932">
        <property type="entry name" value="GeBP-like_DBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31662">
        <property type="entry name" value="BNAANNG10740D PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31662:SF33">
        <property type="entry name" value="DNA-BINDING STOREKEEPER PROTEIN TRANSCRIPTIONAL REGULATOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04504">
        <property type="entry name" value="GeBP-like_DBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glabrous enhancer-binding protein-like DBD" evidence="3">
        <location>
            <begin position="179"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="284"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="38"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="89"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="168"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW20289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="46420" checksum="8BE22123D1479BC1" modified="2014-02-19" version="1">MAQKQKRPSPLDEPPTASSSDSEEEETQKPSSLRHGEEEEEEASSGEEEEESSGEEAEDDDLPPPITKTNPPPPPTNPHPQPSSSDSETASESETESETESTPAKAVKPLASKPMDQAPKLKALPSPAPPKPPLKRAAENINSNVAKKKKKSGDSSSSAAASDEEMEDGKKSGDQMKKFQRLWSEDDEIAILKGLADFTSKTGHDPLKFEGGNAFHAFLKKSLHVEVTSNQLKEKARRLKKKYETAAVRGNGADGLTFSKPHDQRTFELSKKVWGSEIDGAVANGAVEKPKANGNAAKSPKKKETGSRNVSSAKKTKPEPKPEVVPGPRFDLNESEKTQSNQKPVSCEVSMFLHAVSRFKEGLGVFGLDEGDVTRGLELIGESKRAELRAKWKKLQRTELELFANRSELIGEQTKLIVEALRSSNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQW9</accession>
    <name>V7BQW9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G125800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQW9"/>
    <dbReference type="SMR" id="V7BQW9"/>
    <dbReference type="STRING" id="3885.V7BQW9"/>
    <dbReference type="Gramene" id="ESW19445">
        <property type="protein sequence ID" value="ESW19445"/>
        <property type="gene ID" value="PHAVU_006G125800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDLWWAH"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901696">
        <property type="term" value="P:cannabinoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.43.10:FF:000004">
        <property type="entry name" value="Berberine bridge enzyme-like 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754644" description="FAD-binding PCMH-type domain-containing protein" evidence="8">
        <location>
            <begin position="23"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="9">
        <location>
            <begin position="72"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="543" mass="61152" checksum="5053ADA258B5C7A6" modified="2014-02-19" version="1">MLSPSSHLAILVLLLSVSLAASASLDENFAQCLSFYSDKAAPFYASIYTPKNASFTNILESSAQNLRYLVPSAPKPELIFTPLTDSHVQVAVTCSKKLGIHLRIRSGGHDYEGLSYVSEVEAPFIIVDLSKLRAINVDIKDNSAWIQAGATIGEVYYRIYEKSSVHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDAKLVDANGQILDREAMGEDLFWAIRGGGGASFGILLWWKIKLVPVPENVTVFTVTRSLEQDATKIVHRWQEVAPYIDEDLFIRVIIQPATVGNKTERTITTSYNAQFLGGADRLLQVMKENFPELGLTRKDCLETSWIKSVLYIAGYPNDTPPEVLLQGKSTFKNYFKAKSDFVREPIPETGLQGLWQRLLEEDSPLMIWNPYGGMMSKFSESDIPFPHRNGTLYKIQYLSLWQDGDKNATKHIDWIRKLYNYMTPYVSKFPREAYVNYRDLDLGMNKKNYTSYIQATSWGNMYFKDNFNRLVKIKTKVDPDDVFRHEQSIPPLPVSSMKLKDKKSKTWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRA1</accession>
    <name>V7BRA1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G213900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRA1"/>
    <dbReference type="SMR" id="V7BRA1"/>
    <dbReference type="STRING" id="3885.V7BRA1"/>
    <dbReference type="Gramene" id="ESW20494">
        <property type="protein sequence ID" value="ESW20494"/>
        <property type="gene ID" value="PHAVU_006G213900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3071">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHHMAMV"/>
    <dbReference type="OrthoDB" id="434092at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034625">
        <property type="term" value="P:fatty acid elongation, monounsaturated fatty acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034626">
        <property type="term" value="P:fatty acid elongation, polyunsaturated fatty acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019367">
        <property type="term" value="P:fatty acid elongation, saturated fatty acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030148">
        <property type="term" value="P:sphingolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042761">
        <property type="term" value="P:very long-chain fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030457">
        <property type="entry name" value="ELO_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002076">
        <property type="entry name" value="ELO_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11157:SF132">
        <property type="entry name" value="ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11157">
        <property type="entry name" value="FATTY ACID ACYL TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01151">
        <property type="entry name" value="ELO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01188">
        <property type="entry name" value="ELO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="200"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="230"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW20494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="282" mass="32455" checksum="89E1BD9CD8C4C0DD" modified="2014-02-19" version="1">MLSGLDLEYWLVNHPTIRNFSWRPGKTLGSSPHFLFFTILSYLFSTFILPHRIISSSISPQLIKTISAIHNIFLLLLSFIMALGCLLSTFHHAPHLHWIICFPPHTKPTGPLFFWAYIFYLSKILEFADTLLIILTNSVQRLTFLHVYHHSTVVIMCYIWLQTSQTLFPAVLVTNASVHVLMYAYYLSCALGVRPRWKKLVTNVQILQFYSSFVVLGVMLYYHFTGSGCSGVWGWTFNVAFYLSLLLLFLDFHKKSYGASSINKNKLAVKSSKPFFSLQENH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRP0</accession>
    <name>V7BRP0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G145800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the TALE/KNOX homeobox family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRP0"/>
    <dbReference type="SMR" id="V7BRP0"/>
    <dbReference type="Gramene" id="ESW19678">
        <property type="protein sequence ID" value="ESW19678"/>
        <property type="gene ID" value="PHAVU_006G145800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0773">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DWWGRHY"/>
    <dbReference type="OrthoDB" id="10056939at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009888">
        <property type="term" value="P:tissue development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000076">
        <property type="entry name" value="Homeobox protein knotted-1-like 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005539">
        <property type="entry name" value="ELK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008422">
        <property type="entry name" value="KN_HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005540">
        <property type="entry name" value="KNOX1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005541">
        <property type="entry name" value="KNOX2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050224">
        <property type="entry name" value="TALE_homeobox"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11850">
        <property type="entry name" value="HOMEOBOX PROTEIN TRANSCRIPTION FACTORS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03789">
        <property type="entry name" value="ELK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05920">
        <property type="entry name" value="Homeobox_KN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03790">
        <property type="entry name" value="KNOX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03791">
        <property type="entry name" value="KNOX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01188">
        <property type="entry name" value="ELK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01255">
        <property type="entry name" value="KNOX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01256">
        <property type="entry name" value="KNOX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51213">
        <property type="entry name" value="ELK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0371">Homeobox</keyword>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELK" evidence="9">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="Homeobox" evidence="8">
        <location>
            <begin position="277"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox; TALE-type" evidence="5">
        <location>
            <begin position="278"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="82"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="82"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="108"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="375" mass="42000" checksum="879FF6147AE3B142" modified="2014-02-19" version="1">MCKKAMEGSSNSNGTSYLLAFGENSGGLCPMTMMPLVTSHHAGHHPINPNPSNNTNNNANTNCLFIPNCSNSGTPSIMLDNNHNNNDDNNNTGVGYYFRESGHHNHRNNNNGSSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEESCASAVTMVGDAAGSSCLGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFGCNEGGDRNGSSEEDVDVQSMIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPTHPHYYVDTVLANPFPMDLSHPML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUP3</accession>
    <name>V7BUP3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 19">Peroxidase</fullName>
            <ecNumber evidence="4 19">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_005G094200g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="16 19">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="16 19">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="19">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 19"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUP3"/>
    <dbReference type="SMR" id="V7BUP3"/>
    <dbReference type="STRING" id="3885.V7BUP3"/>
    <dbReference type="Gramene" id="ESW21722">
        <property type="protein sequence ID" value="ESW21722"/>
        <property type="gene ID" value="PHAVU_005G094200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ2M">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RARCLMF"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7BUP3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF5">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16 19" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 18" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 19" id="KW-0349">Heme</keyword>
    <keyword evidence="13 19" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 16 19" id="KW-0408">Iron</keyword>
    <keyword evidence="7 16 19" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 19" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 19" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="19" id="KW-0964">Secreted</keyword>
    <keyword evidence="19" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149033" description="Peroxidase" evidence="19">
        <location>
            <begin position="26"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="26"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="14">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="16">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="17">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="36"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="69"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="122"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="201"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW21722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="319" mass="34426" checksum="0173474593DAFBA9" modified="2014-02-19" version="1">MAPFLRTLFFVALFILSLLSSSTNAQLSTNFYDKTCPNLQTIVRNVMEQAINGEARLGASILRLFFHDCFVNGCDASILLDDSGTFVGEKNAVPNQNSVRGYEVIDTIKTNVEAACNGMVSCADILALAARDGVVLLGGPSWTVALGRRDATTASQSAANAQIPSPFSDLPTLTTFFAAKGLNARDLTVLSGSHTIGQAQCQFFRGRIFNGTNIDTNFAESRRSICPSSGGDTNLSPLDSLTPIRFDNNYFSELVARRGLLISDQVLFNGDSQDPLVRTYSDNNAAFFGDFAEAMIKMANITPLTGTAGEIRRNCRLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWZ6</accession>
    <name>V7BWZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">E3 ubiquitin-protein ligase RMA</fullName>
            <ecNumber evidence="6">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Protein RING membrane-anchor</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">RING-type E3 ubiquitin transferase RMA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G040100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">E3 ubiquitin-protein ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Endoplasmic reticulum membrane</location>
            <topology evidence="6">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="6">The RING-type zinc finger domain is responsible for E3 ligase activity.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="6"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWZ6"/>
    <dbReference type="STRING" id="3885.V7BWZ6"/>
    <dbReference type="Gramene" id="ESW21081">
        <property type="protein sequence ID" value="ESW21081"/>
        <property type="gene ID" value="PHAVU_005G040100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0823">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLFHCNV"/>
    <dbReference type="OrthoDB" id="6270329at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045103">
        <property type="entry name" value="RNF5/RNF185-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12313">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14634">
        <property type="entry name" value="zf-RING_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="98"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU369090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="21499" checksum="DC0EBE65104167D9" modified="2014-02-19" version="1" fragment="single">YHLDGIEERFRSLEAVAFRARQHERQPLTHAPIQIVNPAGEVVTIAHLQDEEVGVDDVEGEMIEDGRKEKRRASYLVAKALGVKTNEGEGFAAKLFHCNVCLNRAKDPVLTCCGHLFCWPCFLKLPYAYLKVKECPVCKGEVTNESVITIYGNSNVHNSEKLKFDEPNYEIPSKPRSKRVESTRPRFRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX33</accession>
    <name>V7BX33_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G084500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX33"/>
    <dbReference type="SMR" id="V7BX33"/>
    <dbReference type="STRING" id="3885.V7BX33"/>
    <dbReference type="Gramene" id="ESW21608">
        <property type="protein sequence ID" value="ESW21608"/>
        <property type="gene ID" value="PHAVU_005G084500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRBC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTFCHVE"/>
    <dbReference type="OrthoDB" id="1921961at2759"/>
    <dbReference type="PhylomeDB" id="V7BX33"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000008">
        <property type="entry name" value="NAC domain-containing protein 72-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF233">
        <property type="entry name" value="NAC DOMAIN-CONTAINING PROTEIN 72-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="7">
        <location>
            <begin position="14"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="169"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="340" mass="38295" checksum="B6D47CFA02B67504" modified="2014-02-19" version="1">MGVPEKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKTTGTKLDDWVLCRIYKKNSSAQKAVQNGVVSSREHTQYSNGSSSSSSSHLDDVLESLPTIDERCFMMPRAHTVQQQHEEKVNIENLGAGGLVDWANPAVLNPVGDFVSGNNQVVQEHTQGMVNYSGCNDLYVPTFCHVESALPQKMEEEVQSGVRNQNSNNSWFLQNDFTQGFQNSVDTCGFKFPVQPVGFGFRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX60</accession>
    <name>V7BX60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF1677 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G166800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX60"/>
    <dbReference type="STRING" id="3885.V7BX60"/>
    <dbReference type="Gramene" id="ESW22607">
        <property type="protein sequence ID" value="ESW22607"/>
        <property type="gene ID" value="PHAVU_005G166800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYJ8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTSSCMP"/>
    <dbReference type="OrthoDB" id="673856at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012876">
        <property type="entry name" value="DUF1677_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108:SF79">
        <property type="entry name" value="CASP-LIKE PROTEIN (DUF1677)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33108">
        <property type="entry name" value="OS01G0745000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07911">
        <property type="entry name" value="DUF1677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="150"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="21234" checksum="47CFB4729D4DB561" modified="2014-02-19" version="1">MAPNGECLPCSFSRNSNTNNNMCKPPRHSSDHIQRTVSDISFFELTKEGTDLSLPAITEVMDAKCECCGMCEECTPEYIERVREKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRAKSFNPRDKGGQSKGGIARSSSCIPAITREMNGLTMAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXU0</accession>
    <name>V7BXU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ent-kaurene monooxygenase</fullName>
            <ecNumber evidence="14">1.14.14.86</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_005G183600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Catalyzes three successive oxidations of the 4-methyl group of ent-kaurene giving kaurenoic acid, a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 15">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Plastid</location>
            <location evidence="12">Chloroplast outer membrane</location>
            <topology evidence="12">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.86" evidence="14"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXU0"/>
    <dbReference type="SMR" id="V7BXU0"/>
    <dbReference type="STRING" id="3885.V7BXU0"/>
    <dbReference type="Gramene" id="ESW22817">
        <property type="protein sequence ID" value="ESW22817"/>
        <property type="gene ID" value="PHAVU_005G183600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="STFMQWI"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009707">
        <property type="term" value="C:chloroplast outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052615">
        <property type="term" value="F:ent-kaurene oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016709">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010241">
        <property type="term" value="P:ent-kaurene oxidation to kaurenoic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009686">
        <property type="term" value="P:gibberellin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11075">
        <property type="entry name" value="CYP77_89"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000062">
        <property type="entry name" value="Ent-kaurene oxidase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044225">
        <property type="entry name" value="KO_chloroplastic"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47283">
        <property type="entry name" value="ENT-KAURENE OXIDASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47283:SF1">
        <property type="entry name" value="ENT-KAURENE OXIDASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 15 16" id="KW-0349">Heme</keyword>
    <keyword evidence="9 15 16" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 15 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 16" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0934">Plastid</keyword>
    <keyword evidence="6" id="KW-1002">Plastid outer membrane</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="454"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00058795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00066565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW22817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="512" mass="58640" checksum="A657350CDF874DE8" modified="2014-02-19" version="1">MDPLSLLQVLQSHSFATVLAVGASSLLFLILKLRLTGRHARLPSVPAVPGLPVVGNLLQLKEKKPYKTFARMAEEHGPIYSIRAGSSTIIVVNSAAIAKEAMVTRFNSISTRKLSKALTILTSDKCMVATSDYNDFHKTVKKHILANVLGANAQKRHRLHREDMLENILSSFSEHVKRFSDQAVDFRNVFVSQLFILALKQGLGRNIESIYVEELERTLSRDDIYKILVLDMMEGAIEVDWRDFFPYLKWIPNRSVEKRIQNLNFRRGVVMRALMNEQKKRMASGKVENCFYDYLVTEAKELNEHQISMLLWETIVETSDTTLVTSEWAMYELAKDKTRQARLYKELQNVCGQEKVTEEHLSKLPYLGAVFHETLRKHNPAPIVPIRYAHENTELGGYHIPAGSQIAINIYGCNMDKNKWENPLEWKPERFLDEKYDPSDLYKTMAFGAGKRVCAGSLQAMLIACTAIGRFVQQYEWDLGQGQEENVDTMCLTTHRLQPLQVKLRPRKEYTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0H5</accession>
    <name>V7C0H5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">LisH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G150800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0H5"/>
    <dbReference type="STRING" id="3885.V7C0H5"/>
    <dbReference type="Gramene" id="ESW22401">
        <property type="protein sequence ID" value="ESW22401"/>
        <property type="gene ID" value="PHAVU_005G150800g"/>
    </dbReference>
    <dbReference type="OMA" id="CETINEP"/>
    <dbReference type="OrthoDB" id="1429063at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35117">
        <property type="entry name" value="MYOSIN-M HEAVY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35117:SF1">
        <property type="entry name" value="MYOSIN-M HEAVY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW22401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="341" mass="38877" checksum="F4C17080FCA3F7F2" modified="2014-02-19" version="1">MQETSKVGDFTEKINISPSQAAFIVDHYLCANNLSQTRAIFRMEASSLFAGSPLSQLSNTSFNLDKILADYISLRRQKTILDKERCSIIQEKYRVQKLMEDMHNAVNTYNAFQRPIPIDVPVTDVSSATFHQNPYGECTATTVYVQNTNPRNVLSQQSNKRKNCETINEPTIVKRSRGRPPGKKNQFRGLNTLPLSRTQSQILTNSSILKTHPNQSAVTTCNEKVVSHCQNNKVMVDHEKEITSKDNSPNSPINSNTNKYYNVSPIPQSLENSIPNEISTLPKETQNDESCVRLPPPMYRTQTHSLCDHNRLIREKNCETINEPTIVKRPRERPQRKKNQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0M2</accession>
    <name>V7C0M2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Serine aminopeptidase S33 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G066000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0M2"/>
    <dbReference type="STRING" id="3885.V7C0M2"/>
    <dbReference type="Gramene" id="ESW23664">
        <property type="protein sequence ID" value="ESW23664"/>
        <property type="gene ID" value="PHAVU_004G066000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1455">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNAQNLW"/>
    <dbReference type="OrthoDB" id="2498029at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000054">
        <property type="entry name" value="Alpha/beta-Hydrolases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051044">
        <property type="entry name" value="MAG_DAG_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11614">
        <property type="entry name" value="PHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine aminopeptidase S33" evidence="1">
        <location>
            <begin position="92"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="373" mass="41958" checksum="82D66F997C606339" modified="2014-02-19" version="1">MIKSIVHHRPSELYRCHPLNGVDRGLKKILNANMDEVGARRRAREAFKDIQLGIDHILFKTPCDGIKMEESYEKNSKGLEIFCKSWIPEASTPKAALFYCHGYGDTCSFFFEGIARKMASSGYAVFAMDYPGFGLSEGLHCFIPSFDGLVDDVIEHYSKIKENPEFRSLPSFLFGQSMGGAVVLKIHLKQPKAWDGAILVAPMCKIADDMVPPKLLTNILIGLANVLPKHKLVPNKDLAEAAFRDLKKKEQVVEIHTFLMSLQTAYNVIAYKDKPRLQSAVEMLRTTQEIERRLKEVSLPLLILHGKADTVTDPSVSKTLYENASCSDKKLKLYEDAYHALLEGEPDEVIIEVFGDIISWLDEHSLKQNQPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0M7</accession>
    <name>V7C0M7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G1863000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0M7"/>
    <dbReference type="Gramene" id="ESW22850">
        <property type="protein sequence ID" value="ESW22850"/>
        <property type="gene ID" value="PHAVU_005G1863000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW22850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="38" mass="4522" checksum="D84DF7B2214A2377" modified="2014-02-19" version="1" fragment="single">MKTLATVSIEFWLRFKPQIRPTRLAINFLFVTARAEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C185</accession>
    <name>V7C185_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Choline kinase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G089000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the choline/ethanolamine kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C185"/>
    <dbReference type="SMR" id="V7C185"/>
    <dbReference type="STRING" id="3885.V7C185"/>
    <dbReference type="Gramene" id="ESW23937">
        <property type="protein sequence ID" value="ESW23937"/>
        <property type="gene ID" value="PHAVU_004G089000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2686">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PLSCHEI"/>
    <dbReference type="OrthoDB" id="10267235at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004103">
        <property type="term" value="F:choline kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004305">
        <property type="term" value="F:ethanolamine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006646">
        <property type="term" value="P:phosphatidylethanolamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05157">
        <property type="entry name" value="ETNK_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603">
        <property type="entry name" value="CHOLINE/ETHANOALAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22603:SF97">
        <property type="entry name" value="CHOLINE_ETHANOLAMINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01633">
        <property type="entry name" value="Choline_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="359" mass="41277" checksum="947011C3E2CAFC03" modified="2014-02-19" version="1">MAIKAIELLKGGANHEEIMEVLAAVAADLGDVIDDVNSLQVKPLKGAMTNEVFEVNWPTKSDGHQRKVLVRLYGEGIEVFFNRVDEIQTFESMSKHGQGPRLLGRFTTGRVEEFIHAKTLSAADLRDTEISALVASKMREFHNLHMHGTKKAQLWQRLRKWLSHAKSLCSPKDIKKFGLDHLDAEINMLVELLSQGYQEIGFCHNDLQYGNIMMDEDTRTITLIDYEYASYNPIAYDLANHFCEMVANYHSDQPHVLDYTKYPGLEERQRFVYNYLSSEGKKPSNSEVEQLLNLAEKYTLANHLFWGLWGLISSYVNTIDFDYKEYARQRFQQYWLKKATLLESPGIISEYGMINGSHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7C243</accession>
    <name>V7C243_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_004G109500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C243"/>
    <dbReference type="SMR" id="V7C243"/>
    <dbReference type="Gramene" id="ESW24189">
        <property type="protein sequence ID" value="ESW24189"/>
        <property type="gene ID" value="PHAVU_004G109500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTAQEMD"/>
    <dbReference type="OrthoDB" id="640180at2759"/>
    <dbReference type="PhylomeDB" id="V7C243"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000005">
        <property type="entry name" value="Putative receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000058">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000001">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000039">
        <property type="entry name" value="receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003:SF277">
        <property type="entry name" value="MALECTIN_RECEPTOR-LIKE KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003">
        <property type="entry name" value="OS07G0166700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 15" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755168" description="Protein kinase domain-containing protein" evidence="15">
        <location>
            <begin position="22"/>
            <end position="834"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="403"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="495"/>
            <end position="769"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="775"/>
            <end position="818"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="785"/>
            <end position="805"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="523"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW24189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="834" mass="92371" checksum="6D024E1F32A1893E" modified="2014-02-19" version="1">MKTQKLIIHLILLLCIPCSSSFTPIDNYLLSCGSQNNASLFNRIFTGDSTNQGSSFLSGDKSISLTNQNPPPDLPILYHTARVFPSTGSYRFNMKKHGTHLVRFHFSPFKAQGFDPKSANFSVLVDGNLVLTNFKPSNGVLFKEFILKIESNLLEIVFRPEGNSGFAFVNAMEVFTAPVDFVLDYGTRLVGPFGVVEYKNLSSQVLETVHRINVGGVKVTAFNDTLWRTWIPDEEFLVSKDAAKPVVSTHTPNYQKGGATREIAPDSVYMTAQEMDKDHTIIASQFNITWDFPVAPGGVRHLVRLHFCDIVSPVLNLLYFDVYINGYSAYKDLDLSSLTVHVLASPVYVDFVADSDDSGVMRISVGPSELSASRGMNAILNGAEIMKLVNVVDSRVVPGKKRLWILVGSIAGGGTVVLLLVISAFVLALKCRKKKKKKKPKQRTMESVGWTPLRVFGGSSLSRMSEGTAFPSPGSYGYFGLRIPFADIQLATNNFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHAPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARSAVDPQLDREQVNLAEWVLEWQKKGMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTIGAVLWNLEYALQLQESDQEEEPYDDSSAQETLNVTTTITPGSPSTNIRREGDNDNGYSDISATEVFSQLMKSEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3I7</accession>
    <name>V7C3I7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Auxin efflux carrier component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G150600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">May act as a component of the auxin efflux carrier.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the auxin efflux carrier (TC 2.A.69.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3I7"/>
    <dbReference type="SMR" id="V7C3I7"/>
    <dbReference type="STRING" id="3885.V7C3I7"/>
    <dbReference type="Gramene" id="ESW24679">
        <property type="protein sequence ID" value="ESW24679"/>
        <property type="gene ID" value="PHAVU_004G150600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRM7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGSHEYG"/>
    <dbReference type="OrthoDB" id="1868374at2759"/>
    <dbReference type="PhylomeDB" id="V7C3I7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010329">
        <property type="term" value="F:auxin efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009926">
        <property type="term" value="P:auxin polar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014024">
        <property type="entry name" value="Auxin_eff_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051107">
        <property type="entry name" value="Auxin_Efflux_Carrier"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_transp_PIN-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00946">
        <property type="entry name" value="2a69"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31752:SF18">
        <property type="entry name" value="AUXIN EFFLUX CARRIER COMPONENT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31752">
        <property type="entry name" value="AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="553"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="586"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW24679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="608" mass="66656" checksum="8F252D9762DF3F66" modified="2014-02-19" version="1">MITLVDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIILLVLLAIWSNFTKKGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDSGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYGGHDQKEVKLTVSPGKVENHRDTQEDYLEKDEFSFGNRGMEREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C542</accession>
    <name>V7C542_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF4408 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G127400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C542"/>
    <dbReference type="STRING" id="3885.V7C542"/>
    <dbReference type="Gramene" id="ESW24400">
        <property type="protein sequence ID" value="ESW24400"/>
        <property type="gene ID" value="PHAVU_004G127400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SA1A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KVNREWK"/>
    <dbReference type="OrthoDB" id="1110706at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36595">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36595:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="138" mass="15379" checksum="0B465DEE641F1190" modified="2014-02-19" version="1">MMLGSVLEFITQAASSSAFIFCFCNLIIVIILVDLKPSLSIHQKSEIHLLEGANDQKQGARANSKSLVEKDTTAMAQAVEVSHDDEAETVENIEIEGNEDEEKVEQGKDDELRKRVEEFIQKVNKGWKEELLSTSSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5D5</accession>
    <name>V7C5D5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">pectinesterase</fullName>
            <ecNumber evidence="4">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G027000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the pectinesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="4"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5D5"/>
    <dbReference type="SMR" id="V7C5D5"/>
    <dbReference type="STRING" id="3885.V7C5D5"/>
    <dbReference type="Gramene" id="ESW25334">
        <property type="protein sequence ID" value="ESW25334"/>
        <property type="gene ID" value="PHAVU_003G027000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R3C8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THNNFPE"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000008">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31321">
        <property type="entry name" value="ACYL-COA THIOESTER HYDROLASE YBHC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31321:SF87">
        <property type="entry name" value="PECTINESTERASE 63-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="5" id="KW-0134">Cell wall</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5011112208" description="pectinesterase" evidence="10">
        <location>
            <begin position="27"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase catalytic" evidence="11">
        <location>
            <begin position="71"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW25334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="369" mass="40920" checksum="4B0690149881B7F2" modified="2014-02-19" version="1">MASKYVYCSIKVTLMVVFLTTQVVLPDDDTPMPSDKTELGSWFQSNVGTLRKRKGSLDPKLVAAEEGAKVVKVMQDGSGEYKTISDALRSIPSGNTMRVILYIGPGNYHEKITVEKTKPFVTFYGKPGNMPNLTYDGTARQYGTVDSATLIVLSDYFVAANIIISNSAPRPDENSVGGQAVALRISGDKATFYNCELYGYQDTLLDDANRHFFKDCLIQGYVDYIFGSGKSLYVNCEIRTLGDEGFTFITAQARKNKQEDNGFSFVHCELTGTGSDTYLGRAWFGYSTVIFAYCNMANIFNKQAWSDNNHPEFDKTLYFGEYKNRGPGSDVRGRSPLAKQLSESEVKPYLGIGMIEGSKWILPPPTPKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7M4</accession>
    <name>V7C7M4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G095200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7M4"/>
    <dbReference type="Gramene" id="ESW26152">
        <property type="protein sequence ID" value="ESW26152"/>
        <property type="gene ID" value="PHAVU_003G095200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R8QH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPCCCCS"/>
    <dbReference type="OrthoDB" id="6161796at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="269"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="62"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="148"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="278"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="472"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="507" mass="47526" checksum="F9CDB3A5268C6E0C" modified="2014-02-19" version="1" fragment="single">MFTIECQCHESATMLIPEPFVSHLSTCSAEHPRHGHVPDTSSQPMTCTDSTTSSVGGDNTDGTTINVGGNSTNGTTSTVGGDSTDGPSSTVSRDSTDGSTSTVGGNGTDGATSTVGGNSTDIFCCDNSTDGATSGTTSVGRGKRSDGTTRTVGGNSTDGPTSTLGGNSTDDPTSVFGGNSTDGATSTVGGNTTDGATSTVGGNTTDGATSTVGGKTTDGATSTVGGNRTDGATSTVGCKSTNGTTSTAGCNSIDGATIDVGGNSTNGTISIVGGDSTDGPTSTVGGNSTDGATSTVVGNSSDGATSTVGCNSTDGATSTVGGNSTDGATSTVGGNSTDGATSTVGGNSTDGATSTVGGNSTVGSTSTVGGYSTVGATSTVGCNSTDGTPSTVGGDSTDGSTVDVGGNNTISTVGGESTDGPTSTVGGHSNDCATSTVGGNSTDGTTSVVGGNRSDGTTSTVVVNSTDYATSTGNDGPNNTVGGNNTDGGNSTDGSTSTVVGNSTCSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8G7</accession>
    <name>V7C8G7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">alpha,alpha-trehalose-phosphate synthase (UDP-forming)</fullName>
            <ecNumber evidence="3">2.4.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G053000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7 10">
            <text>D-glucose 6-phosphate + UDP-alpha-D-glucose = alpha,alpha-trehalose 6-phosphate + UDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18889"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:58429"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="EC" id="2.4.1.15"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the trehalose phosphatase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the glycosyltransferase 20 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.15" evidence="3"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8G7"/>
    <dbReference type="SMR" id="V7C8G7"/>
    <dbReference type="STRING" id="3885.V7C8G7"/>
    <dbReference type="Gramene" id="ESW25638">
        <property type="protein sequence ID" value="ESW25638"/>
        <property type="gene ID" value="PHAVU_003G053000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1050">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TSWDKRR"/>
    <dbReference type="OrthoDB" id="755951at2759"/>
    <dbReference type="PhylomeDB" id="V7C8G7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003825">
        <property type="term" value="F:alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004805">
        <property type="term" value="F:trehalose-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03788">
        <property type="entry name" value="GT20_TPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01627">
        <property type="entry name" value="HAD_TPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000010">
        <property type="entry name" value="Alpha,alpha-trehalose-phosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000052">
        <property type="entry name" value="Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000054">
        <property type="entry name" value="alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000017">
        <property type="entry name" value="alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001830">
        <property type="entry name" value="Glyco_trans_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00685">
        <property type="entry name" value="T6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788:SF14">
        <property type="entry name" value="ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788">
        <property type="entry name" value="TREHALOSE-6-PHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00982">
        <property type="entry name" value="Glyco_transf_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="857" mass="96897" checksum="E642E19056F08B55" modified="2014-02-19" version="1">MASRSYANLLDLASGDLLDIPRTPRALPRVMTIPGIISDLDGYGCNDGDSDVSSSGYRERKIIVANMLPLQAKRDIETAKWVFSWDEDSILLQLKDGFSSDTEVIYVGSLKIEIDLCEQDAVAQRLLDEFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICPDHGDRFDRTLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRYNQVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKISPVGIHMGRLESVLNLSSTSAKLKEVQEEFKGKKVILGVDDMDIFKGISLKLLAVEHLLQQNSDLRGKVVLVQIVNPARGFGKDVQEAKNETYLIARRINDTYSKNNYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTARLDESLGRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYAALTMSDSEKQLRHEKHYRYVSSHDVAYWANSFMQDLERACADHYTKRCWGFGLGLGFRVVSLSHGFRKLTIDHVVSAYKRTNRRAIFLDYDGTVVPQSSISKVPSPEVISVLNALCNDPKNIVFIVSGRGRDSLSDWFTSCRKLGLAAEHGYFLRWNKDSEWEASHLSADLDWKKIVEPVMQLYTEATDGSNIEIKESGLVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVTRGQHIVEVKPQGISKGWVAEEVLQTMVNSNPPDFVLCIGDDRSDEDMFETILRTVSLPSAPEIFACTVGRKPSKAKYFLDDTSDVVKLLQGLAASSNPKPRHLAHFQVSFESTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9T9</accession>
    <name>V7C9T9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GH18 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G158800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 18 family. Chitinase class V subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9T9"/>
    <dbReference type="SMR" id="V7C9T9"/>
    <dbReference type="STRING" id="3885.V7C9T9"/>
    <dbReference type="Gramene" id="ESW26914">
        <property type="protein sequence ID" value="ESW26914"/>
        <property type="gene ID" value="PHAVU_003G158800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2806">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NPMTYDF"/>
    <dbReference type="OrthoDB" id="76388at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004568">
        <property type="term" value="F:chitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006032">
        <property type="term" value="P:chitin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02879">
        <property type="entry name" value="GH18_plant_chitinase_class_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.10:FF:000003">
        <property type="entry name" value="Class V chitinase CHIT5b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011583">
        <property type="entry name" value="Chitinase_II/V-like_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029070">
        <property type="entry name" value="Chitinase_insertion_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050314">
        <property type="entry name" value="Glycosyl_Hydrlase_18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11177">
        <property type="entry name" value="CHITINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11177:SF396">
        <property type="entry name" value="NOD FACTOR HYDROLASE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00636">
        <property type="entry name" value="Glyco_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54556">
        <property type="entry name" value="Chitinase insertion domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755114" description="GH18 domain-containing protein" evidence="6">
        <location>
            <begin position="19"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="GH18" evidence="7">
        <location>
            <begin position="21"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="372" mass="40551" checksum="4524FADE4A48D1BB" modified="2014-02-19" version="1">MLRFLFLPFFFLITVTRSTSDIKAIYWLQQPLFPPQAINTSLFTHVYYAFLAPNNATYQLHVPNSTAATLATFTATLRPSVAPLISIGGANSSSDLFAAIASNAAARAAFINSTIDVARAFGFHGVDLDWEFPRTADEMNDLGQLFREWRAAIASEASATSRKPLLLTATVYFSVDYFLSETASLRYPVGSINDNLDWINVMSYDLNGPWSNLTGPPAGLFNPKSNASVDYGLRSWIRGGVIPKKVVMGLPLYARTWQLLDPSVHGIGAPAVGAGTGLDGAMALFQVLEYNNETGANVVYDKETASVYSYSGSNWVGYDDPVTVAVKVGFAQSLYLRGYFFWAAGLDTSDWKVSTQALNSWTLCINEKGGVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9V6</accession>
    <name>V7C9V6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G159800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9V6"/>
    <dbReference type="SMR" id="V7C9V6"/>
    <dbReference type="STRING" id="3885.V7C9V6"/>
    <dbReference type="Gramene" id="ESW26934">
        <property type="protein sequence ID" value="ESW26934"/>
        <property type="gene ID" value="PHAVU_003G159800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU6F">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HASTHYC"/>
    <dbReference type="OrthoDB" id="1908613at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044787">
        <property type="entry name" value="HHO5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058673">
        <property type="entry name" value="HHO5-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003:SF49">
        <property type="entry name" value="MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26575">
        <property type="entry name" value="HHO5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="241"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="159"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="392"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="33"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="186"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="222"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="408"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="441"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="450" mass="49207" checksum="8FA91D950BC58F84" modified="2014-02-19" version="1">MASPSELSLDCKPQSYSLLLKSFGDQTDQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFKVNHGAKPVLEEFIPMKHLASESSEKAINMSDKANWMTSAQLWSQASEGTKQQPTLTSPKEADIGFSISPKLALDSKQRNGGGAFLPFSKERNSCQGSTLRPLPELALASSEKEMEDKKRAEVEKGVSCQNKKENSGSDGAVVDQGKSGSPVASSLAQTTTTTAQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQASSAAPQLVVLGGIWVPPEYATAAHTATPTLYGAHPTSHAPPPHYCTATPVPQEFYTAAPQQQLLPPPPPHHNALHHLHMYKAATHGHGSPDSEVPGCGERSESIEDGKSESSSWKGESGENEGERKGIGEESNGSEITLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAS1</accession>
    <name>V7CAS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G121000g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="19" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAS1"/>
    <dbReference type="SMR" id="V7CAS1"/>
    <dbReference type="STRING" id="3885.V7CAS1"/>
    <dbReference type="Gramene" id="ESW26453">
        <property type="protein sequence ID" value="ESW26453"/>
        <property type="gene ID" value="PHAVU_003G121000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW26454">
        <property type="protein sequence ID" value="ESW26454"/>
        <property type="gene ID" value="PHAVU_003G121000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PQNGAFM"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000083">
        <property type="entry name" value="Putative receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000035">
        <property type="entry name" value="Putative receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052232">
        <property type="entry name" value="RLK_Ser/Thr-Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47984">
        <property type="entry name" value="OS01G0323000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47984:SF19">
        <property type="entry name" value="RECEPTOR-LIKE KINASE PLANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="182"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="104"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="453"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="105"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="139"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="478"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW26453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="504" mass="56147" checksum="C81AC8E7A473257F" modified="2014-02-19" version="1">MASDLSSGLSKETSVFGLKAWELMGILVGLFIIIILVVVSICLTSRKKSRRVNGMLPLSHMLSVSDEIKEIRVDQVSSNNHPQNGAFMSLYDRFSDRDSEKVLIQPNNGENSSQSGSFVHLKKDDGGSQSGEESGAKSVSTYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPATEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQTGNMEVEAQKEISDTEKSDSPDPKSNGRRNQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB73</accession>
    <name>V7CB73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AMP-dependent synthetase/ligase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G133600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB73"/>
    <dbReference type="SMR" id="V7CB73"/>
    <dbReference type="Gramene" id="ESW26608">
        <property type="protein sequence ID" value="ESW26608"/>
        <property type="gene ID" value="PHAVU_003G133600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10253869at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.980">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW26608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="75" mass="7903" checksum="15DC28DB0A209AF4" modified="2014-02-19" version="1">MLNPSMQDDTTTLLYSSGTMGPSKGVLSSHHNLISWSKSSSVSSTSKTTKTSSAQAPCFTYTVSSPLPLDLLSFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEI8</accession>
    <name>V7CEI8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Selenoprotein F</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G296700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum lumen</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the selenoprotein M/F family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEI8"/>
    <dbReference type="SMR" id="V7CEI8"/>
    <dbReference type="STRING" id="3885.V7CEI8"/>
    <dbReference type="Gramene" id="ESW28558">
        <property type="protein sequence ID" value="ESW28558"/>
        <property type="gene ID" value="PHAVU_003G296700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28559">
        <property type="protein sequence ID" value="ESW28559"/>
        <property type="gene ID" value="PHAVU_003G296700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3384">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LEMCNCK"/>
    <dbReference type="OrthoDB" id="1910009at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005788">
        <property type="term" value="C:endoplasmic reticulum lumen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.50">
        <property type="entry name" value="Sep15/SelM thioredoxin-like domain, active-site redox motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038219">
        <property type="entry name" value="Sep15/SelM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039992">
        <property type="entry name" value="Sep15_SelM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014912">
        <property type="entry name" value="Sep15_SelM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13077">
        <property type="entry name" value="SELENOPROTEIN F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13077:SF6">
        <property type="entry name" value="SELENOPROTEIN F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08806">
        <property type="entry name" value="Sep15_SelM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0712">Selenocysteine</keyword>
    <keyword evidence="3 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732400" description="Selenoprotein F" evidence="7">
        <location>
            <begin position="29"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="Selenoprotein F/M" evidence="8">
        <location>
            <begin position="86"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00040775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW28559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="164" mass="18524" checksum="387D1B311DD477C1" modified="2014-02-19" version="1">MNKGLMGGYGYGVVLILVLLPFSLGASAEQLSSRECENLGFTGLALCSDCNTLSDYVKDKELVSDCLKCCTEDSDDATTKITYSGALLEVCMRKLVFYPEVVSFIEEEKDQFPSVKVQYDFNSPPKLIMLDDEGQQKETIRIDNWKREHILQFLREKVKRLASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFX7</accession>
    <name>V7CFX7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Oligopeptide transporter 7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G263700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFX7"/>
    <dbReference type="Gramene" id="ESW28160">
        <property type="protein sequence ID" value="ESW28160"/>
        <property type="gene ID" value="PHAVU_003G263700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2262">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARINGWS"/>
    <dbReference type="OrthoDB" id="9986677at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035673">
        <property type="term" value="F:oligopeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004648">
        <property type="entry name" value="Oligpept_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004813">
        <property type="entry name" value="OPT"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00727">
        <property type="entry name" value="ISP4_OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00728">
        <property type="entry name" value="OPT_sfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22601">
        <property type="entry name" value="ISP4 LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03169">
        <property type="entry name" value="OPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0571">Peptide transport</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="161"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="302"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="372"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="434"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="461"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="546"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="618"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="669"/>
            <end position="687"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="696"/>
            <end position="715"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW28160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="753" mass="84206" checksum="6DB0A29C21E1FE84" modified="2014-02-19" version="1">MCNDPEINAPLIKRRHHNNDAISEAEKSPAAENSPIEQVALTVPVSDDPSLPSFTFRTWILGTLACVLLSFLNQFFGFRREPLSVTAISAQIAVVPAGHLMAAAVTRRVFMKGTKWEFTLNPGKFNVKEHVLITIFASSGAASVYAIYFVSAVKLFYRKDLTILTALLVVITSQVLGFGWAGIFRKYLVEPAAMWWPQNFFSGLALQLCYFRALHEKEERRKGGLTRNQFFLIAFLCSFAYYVFPGYLFPSLTSISWICWMFPTSVIAHQLGSGLHGLGVGAIGFDWSSICSYLGSPLASPWFATANVAAGFAIFIYAIVPIAYSTNLYNARRFPIFSDELFMSNGQKYNISAIIDSNFHLDMEAYEREGPLYLSTMFAMSYGIGFACISATLVHVSLFHGSEILRLSKSAFQENKIDIHTKIMRKNYKQVPEWWFLCILLFNIVATIFICEYFNNELQLPWWGVVLACVVAMSFTLPIGVIRATTNQAPALNIITEYIIGYVYPGYPVANMLFKVYGDVSMQQAVFFLQDFKLGHYMKIPPREMFLAQVVGTLMSGVVHLLTSWWLMNTVPNICERALLPAGSPWTCPGDHVFYDASVIWGLIGPRRTFGDLGHYSAINWFFLAGAIAPFLVWLAHKALPQKQWIRLITVPVLLGALSDMPPATAVNYTSWVIVGFVSGFVVYRYYRGWWSRHNYVLSGALDAGLAFMGVLLYLCLGMEHISLNWWGTDSDGCPLASCPTAPGVESVGCPLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH69</accession>
    <name>V7CH69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G270400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH69"/>
    <dbReference type="SMR" id="V7CH69"/>
    <dbReference type="Gramene" id="ESW28241">
        <property type="protein sequence ID" value="ESW28241"/>
        <property type="gene ID" value="PHAVU_003G270400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1304">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYSGLVM"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015179">
        <property type="term" value="F:L-amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015175">
        <property type="term" value="F:neutral L-amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950">
        <property type="entry name" value="AMINO ACID TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22950:SF684">
        <property type="entry name" value="AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="246"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="292"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="350"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="384"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="8">
        <location>
            <begin position="23"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW28241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="45184" checksum="F964357B9C6C3241" modified="2014-02-19" version="1">MGFQKAETPPEDAPLLSKAPPLSSNFKTFANIFISIVGSGVLGLPYCFKKTGWITGLLMLFLVAFLTYHCMMLLVRTRRKLQSNEGFPNLNSFGDLGYAIGGPLGKLFVDVMIGFSHCGFCVSYLIFISTTLANLAGDGSKWSLFLGFTPKVLFLWGCFPFQLGLNAIPSLTLLAPLSIFADVVDIAAKSVVMVDEVFVYMKNRPPLEAFGGWSVFFYGLGVAVYAFEGIGMVLPLESEAKDKEKFGGVLGVGMFLISLLYAAFAALSYFAFGEETQGIITTNLGPGLVSGLVQLGLCINLFFTFPLMMNPVYEVVERRLCESRYCLWLRWLLVLGVSLVALLVPNFADFLSLVGSSVCVILSFVLPAMFHYSVFKEEMDWKCMVSDVAIMVFGLVVAVKGTCSSLFNIFGND</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJW5</accession>
    <name>V7CJW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Exostosin GT47 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G157100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 47 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJW5"/>
    <dbReference type="STRING" id="3885.V7CJW5"/>
    <dbReference type="Gramene" id="ESW30487">
        <property type="protein sequence ID" value="ESW30487"/>
        <property type="gene ID" value="PHAVU_002G157100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1021">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHTHQYS"/>
    <dbReference type="OrthoDB" id="1924787at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004263">
        <property type="entry name" value="Exostosin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040911">
        <property type="entry name" value="Exostosin_GT47"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11062">
        <property type="entry name" value="EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11062:SF117">
        <property type="entry name" value="XYLOGLUCAN-SPECIFIC GALACTURONOSYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03016">
        <property type="entry name" value="Exostosin_GT47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <feature type="domain" description="Exostosin GT47" evidence="6">
        <location>
            <begin position="140"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="525" mass="60454" checksum="0C507181A8A4F283" modified="2014-02-19" version="1">MAVSISRKRPKSSSRNLEAKQSYFGLTILYNFLSRVSALVFLIILIYMWSSFSTLITGNIIHVCFSTRKLNNLYCLSAGTHPSFEIPTSTNNSSPIITPGIDQVINDTDERVANAVKVVEEQLQVHRSWRSKSNKNYATCDGKGIYVYDLPSKFNKDLVGQCRDMVPWQDFCRYLSNEGLGEPIAKLGKGWYKTHQYSLELIFHSNVLRHPCRVFDQTVAKLFYVPFYGGLDILRWHFKNVSSDVKDSLSLELVKWLERQGPWKRNSGKDHVLVLGKISWDFRRSNESPWGTRLLELDKLQNPIKLLIERQPWHLNDIGIPHPTNFHPHSDNDIISWQLKIMRSNRKKLVSFAGAARANADDNTRSTLINQCTSLGNGKCHFMNCSSVKCDEAEVVIELFVESEFCLQPPGDSPTRKSVFDSLISGCIPVLFDPFTAYYQYPWHLPHDHDKYSVLMDKKEVKEMNVVERLSNISLRERENMRRYIVYELLPGLVYGDYNAEPHKFQDAFAITINNLLQRVSTLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJX9</accession>
    <name>V7CJX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Phospholipase D</fullName>
            <ecNumber evidence="10">3.1.4.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G153400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-sn-glycero-3-phosphate + choline + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14445"/>
            <dbReference type="ChEBI" id="CHEBI:15354"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57643"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="EC" id="3.1.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the phospholipase D family. C2-PLD subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.4" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJX9"/>
    <dbReference type="SMR" id="V7CJX9"/>
    <dbReference type="STRING" id="3885.V7CJX9"/>
    <dbReference type="Gramene" id="ESW30444">
        <property type="protein sequence ID" value="ESW30444"/>
        <property type="gene ID" value="PHAVU_002G153400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1329">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KQHERFS"/>
    <dbReference type="OrthoDB" id="14911at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004630">
        <property type="term" value="F:phospholipase D activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046470">
        <property type="term" value="P:phosphatidylcholine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009395">
        <property type="term" value="P:phospholipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd04015">
        <property type="entry name" value="C2_plant_PLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.870.10:FF:000027">
        <property type="entry name" value="Phospholipase D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.870.10:FF:000025">
        <property type="entry name" value="Phospholipase D delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.870.10">
        <property type="entry name" value="Endonuclease Chain A"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024632">
        <property type="entry name" value="PLipase_D_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015679">
        <property type="entry name" value="PLipase_D_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011402">
        <property type="entry name" value="PLipase_D_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18896">
        <property type="entry name" value="PHOSPHOLIPASE D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18896:SF130">
        <property type="entry name" value="PHOSPHOLIPASE D GAMMA 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12357">
        <property type="entry name" value="PLD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00614">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036470">
        <property type="entry name" value="PLD_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56024">
        <property type="entry name" value="Phospholipase D/nuclease"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0106">Calcium</keyword>
    <keyword evidence="6 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="C2" evidence="11">
        <location>
            <begin position="16"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="12">
        <location>
            <begin position="365"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="12">
        <location>
            <begin position="696"/>
            <end position="723"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR036470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW30444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="850" mass="96022" checksum="2C163CE165EB593D" modified="2014-02-19" version="1">MAHLVYGETPSFGASHHGQAQQTISFPTTATSLKILLLHGNLEIWVNEARNLPNMDMFHKKTGEMVSMLSRRLGGKIEGVMSKTGTSDPYVTVSVADAVIARTFVIRNMENPVWTQRFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEALCSGARVDGFFPIISTNGKPCKGGAMLSLSIQYTPVEKVPLYSHGVGAGPDYQGVPDTYFPLRKGGKVTLYQDAHVHEGCLPSLKVDGDVNYKHESCWHHIFDAISKAQRLVYIVGWSVYYNVSLIRDMGDGKAHTLGDLLKAKSREGVRVLLLVWDDPTSRSILGYNTVGHMKTHDEDTHQFFKHSSVQVLLCKRAGGKGHSFLKTQEAGTIYSHHQKTVIVDADADHNKRKIVAFIGGLDLCAGRYDTPNHSLFRTLQTTHKNDYYNNNFEGPITDCPRQPWHDLHSKVDGPAAYDILTNFEERWLKALKMHRLRTMKSSLDDSLLKIDRIDDIVGIDKVSCQNEDDQEIWHTQVFRSIDSNSVKGFPKQSQDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYINLGANNLIPMEIALKIASKIKQHERFSVYIVIPMWPEGVPKSKLTQRILFWQFKTMQMMYETVYKALQETGLDNQYEPQDYLNFFCLGNREIPENEHVTKTTRENTPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPRGQVYGYRMSLWSEHIGSVEACFEEPERLECVRRIKSLSESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLSGCETFPDVGGNISGSFKGPQENLTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK34</accession>
    <name>V7CK34_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G091700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK34"/>
    <dbReference type="STRING" id="3885.V7CK34"/>
    <dbReference type="Gramene" id="ESW29703">
        <property type="protein sequence ID" value="ESW29703"/>
        <property type="gene ID" value="PHAVU_002G091700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT8R">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWHPHLL"/>
    <dbReference type="OrthoDB" id="1874781at2759"/>
    <dbReference type="PhylomeDB" id="V7CK34"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11299">
        <property type="entry name" value="O-FucT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11350:FF:000011">
        <property type="entry name" value="O-fucosyltransferase 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024709">
        <property type="entry name" value="FucosylTrfase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31741:SF82">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31741">
        <property type="entry name" value="OS02G0726500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009360">
        <property type="entry name" value="UCP009360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="11" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW29703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="506" mass="58014" checksum="073772B40FA7980A" modified="2014-02-19" version="1">MEVRSEGIQVRCDKFPAPVIPRTRLRIWFIRVCSSIVLWTCLVQLVTVSELWHSHLISGITNGIYHITQVQLPIQGDNGVAQSPPAFLPRRNYTSNGFLRVSCNGGLNQMRAAICDMVTVARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIVKKVPKKFGGKRGYSTLEMPPVSWSNEKYYLEQILPLFGKHKVLHFNKTDTRLANNGLPLDLQKLRCRVNFQALKFTPQIENLGHNLIQMLHEKGPFVALHLRYEMDMLAFSGCTHGCTDKEAEELKQLRYAFPWWKEKEIISDERRSQGLCPLTPEEAALVLRALGFGRETQIYIAAGEIYGSERRLAQLKAVFPQIVKKETLLTWDDLRQFQNHSSQMAALDFMVSAASNTFVPTYDGNMAKLVEGHRRYSGFKRTILLDRKKVVELVDMHQNGTLSWIEFADAVRGVHERRIAQPTRRRVILDKPKEEDYFYANPHECLCEETSCDDLLGSHNSSQVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK81</accession>
    <name>V7CK81_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G096300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK81"/>
    <dbReference type="Gramene" id="ESW29753">
        <property type="protein sequence ID" value="ESW29753"/>
        <property type="gene ID" value="PHAVU_002G096300g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10630414at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="92" mass="10032" checksum="D40615A7DC93AC05" modified="2014-02-19" version="1">MGHSSEGDPHAHFSFPAPFLGRASLSPLARANLPGTDSLLPNKRKPYRHSIYLYSTRGDPLSPLSTPFLSSYSRVFPFPSGVVTGDLQCPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP49</accession>
    <name>V7CP49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SEC1 family transport protein SLY1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G202700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the STXBP/unc-18/SEC1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP49"/>
    <dbReference type="SMR" id="V7CP49"/>
    <dbReference type="STRING" id="3885.V7CP49"/>
    <dbReference type="Gramene" id="ESW31025">
        <property type="protein sequence ID" value="ESW31025"/>
        <property type="gene ID" value="PHAVU_002G202700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1301">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VNDLRAW"/>
    <dbReference type="OrthoDB" id="10251230at2759"/>
    <dbReference type="PhylomeDB" id="V7CP49"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1910">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.830.10">
        <property type="entry name" value="Syntaxin Binding Protein 1, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043154">
        <property type="entry name" value="Sec-1-like_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043127">
        <property type="entry name" value="Sec-1-like_dom3a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001619">
        <property type="entry name" value="Sec1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027482">
        <property type="entry name" value="Sec1-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036045">
        <property type="entry name" value="Sec1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11679">
        <property type="entry name" value="VESICLE PROTEIN SORTING-ASSOCIATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00995">
        <property type="entry name" value="Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005715">
        <property type="entry name" value="VPS45_Sec1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56815">
        <property type="entry name" value="Sec1/munc18-like (SM) proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="623" mass="68905" checksum="048FD5825284135E" modified="2014-02-19" version="1">MSLNLRQKQTECIARMLNLNQPLNATTGTANEEVYKILIYDKFCQNILSPLIHVKDLRKHGVTLYFLIDKDRKPVHDVPAVYFVQPNQSNVQRIVSDASKSLYQSLHLNFSTSIPRPLLEDLAAGTLNSDSIQRISKVHDQYLEFVTLEDNLFSLAHKSCYVQLNDPSAGDKEIEELVEKIVGGLFCVLATLSVVPVIRCPRGGPAEMVASALDQRIRDHLLSKNNLFTEGGNFVSSFQRPVLCIFDRNFELPVAVQHDFRYRPLVHDVLGLKLNRLSVQGEKGGMRSYELDYADSFWVANGSLEFPEVAVEIETQLNKYKKDVDDVNKRTGGTHGAEFDGTDLIGNTKHLMNAVNSLPELTERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMLARGGIERGDLLGVLKGKGTKMDKLRFAIIYLISSESINQSEVEAVEAALRESEVDTAAFQYVKKIKSLNVSLASANSASRSNIVDWAEKLYGQSISAVTAGVKNLLSNDRQLALARTVEALIEGRPNPETDSYLSFDPRAPKSAAGASSSHLKGPFKEAIVFMIGGGNYVEYCSLQELAQHQQPAKHIIYGTTEILTGIDFVEQLTLLGQKMGLGNVGSSSTSAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPA8</accession>
    <name>V7CPA8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G283300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPA8"/>
    <dbReference type="SMR" id="V7CPA8"/>
    <dbReference type="Gramene" id="ESW31979">
        <property type="protein sequence ID" value="ESW31979"/>
        <property type="gene ID" value="PHAVU_002G283300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4374">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTMRVSP"/>
    <dbReference type="OrthoDB" id="539213at2759"/>
    <dbReference type="PhylomeDB" id="V7CPA8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd09487">
        <property type="entry name" value="SAM_superfamily"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.50">
        <property type="entry name" value="Transcription Factor, Ets-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001660">
        <property type="entry name" value="SAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013761">
        <property type="entry name" value="SAM/pointed_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10627:SF69">
        <property type="entry name" value="PROTEIN BICAUDAL C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10627">
        <property type="entry name" value="SCP160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00536">
        <property type="entry name" value="SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00454">
        <property type="entry name" value="SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47769">
        <property type="entry name" value="SAM/Pointed domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50105">
        <property type="entry name" value="SAM_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="SAM" evidence="3">
        <location>
            <begin position="244"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="23"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="85"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="120"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="160"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="34208" checksum="1946733553175523" modified="2014-02-19" version="1">MAEIQPPEGQINGAGGTLILHSLEPAIGSKRQRRPSVRLGDIGGDQPYDSTRRNTKPWKLAFDGHHHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEVSNDREAGNVDSVAIGSWKVKESKKRGSVATKRVRSNWVSRIEDGGGDNGGGEGEGEKYNNGDEEGEDDDGYREFEVENSESPLKEQSPIHSMENLGVDGHRRVFKGREREQQHDGVELSAPSDTDVRDWKCGDRNNENGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEILPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQZ5</accession>
    <name>V7CQZ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">SHSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G231300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQZ5"/>
    <dbReference type="SMR" id="V7CQZ5"/>
    <dbReference type="STRING" id="3885.V7CQZ5"/>
    <dbReference type="Gramene" id="ESW31351">
        <property type="protein sequence ID" value="ESW31351"/>
        <property type="gene ID" value="PHAVU_002G231300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0710">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HETTDSH"/>
    <dbReference type="OrthoDB" id="1245404at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031107">
        <property type="entry name" value="Small_HSP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11527">
        <property type="entry name" value="HEAT-SHOCK PROTEIN 20 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="5">
        <location>
            <begin position="25"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="75"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="134" mass="14604" checksum="D25408A014C02DF4" modified="2014-02-19" version="1">MSIVPNANPFQDSPFTALSTSALSCDPSFLSGQFKWEETADAHVLKGEVPGLRREDVKVEVEDGRVLQVSGAMTVETQEDSDSSHRVNRRSSNFKKSFTVPPNAQPDHMMASMEDGVLTITLPKTNHANAISNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR46</accession>
    <name>V7CR46_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">ABC transporter B family member 13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G005900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR46"/>
    <dbReference type="SMR" id="V7CR46"/>
    <dbReference type="Gramene" id="ESW32652">
        <property type="protein sequence ID" value="ESW32652"/>
        <property type="gene ID" value="PHAVU_001G005900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0055">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PGSIYKQ"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="PhylomeDB" id="V7CR46"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015421">
        <property type="term" value="F:ABC-type oligopeptide transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090374">
        <property type="term" value="P:oligopeptide export from mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18577">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18578">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03249">
        <property type="entry name" value="ABC_MTABC3_MDL1_MDL2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000205">
        <property type="entry name" value="ABC transporter B family member 4"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF11">
        <property type="entry name" value="ATP-BINDING CASSETTE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="271"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="674"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="720"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="801"/>
            <end position="818"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="825"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="905"/>
            <end position="927"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="939"/>
            <end position="959"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="43"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="366"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="678"/>
            <end position="965"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="1000"/>
            <end position="1236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1247" mass="135381" checksum="65B8ABFD3C668083" modified="2014-02-19" version="1">MAEVELVPEQGVASKTDQQTKTESVSFFGLFATADSTDCVLMFLGSVGSCLHGAALPVFFILFGRMIDSLGHLSNNPHKLSSRVSEHALYLVYLGGVVLVSAWMGVAFWMQTGERQTARLRLKYLQAVLRKDIDFFDNEARDSNIIFHISSDAILVQDAIGDKTGHTIRYLSQFIVGFAIGFISVWQLTLLTLAVVPLIALAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAIGSYSKSLDNALNLGKKGGLAKGVGVGFTYGLLFCAWALLLWYASILVRHHKANGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASASSNSKRLDHGTVVPLVTGEIEFCEVCFSYSSRSNMIFEKLSFSVSAGKTIAVVGPSGSGKSTIVSLIQRFYDPTSGKILLDGYDLKNLQLKWLREQMGLVSQEPALFATTIAENILFGKEDADMDKVIQASMAANAHSFIQALPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDSESELIVQQALEKIMSDRTTIVVAHRLSTIRDVDTIIVLKNGQVVESGTHLELLSNNGEYVNLVSLQASQTLSNSRSISRSESSRNSSFREHSDNLTLEEQLMLDTRGELQSSDQHLPSKTTSAAPTILDLLKLNTPEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPQSSKIKQEVDRVALIFLGVAVITIPIYLLLHYFYTLMGEHLTARVRLLMFSAILNNEVAWFDKDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYNHAYSKATSLAREAIANIRTVAAFGAEDRISIQFASELDKPNKQALLRGHISGFGYGITQLLAFCSYALGLWYASVLIKKKESNFGDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVFGILQRRTSITPNDPSSKIVTVLKGEIEFRNVSFKYPMRPDITIFQNLNLRVTAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGSVLIDECDIKSLNLRSLRMRIGLVQQEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMPKGYETEVGERGVQLSGGQKQRVAIARAILKDPCILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIVVLQNGRVAEMGSHERLMAKPGSIYKQLVSLQHEKPEQEDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRG9</accession>
    <name>V7CRG9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G281800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRG9"/>
    <dbReference type="SMR" id="V7CRG9"/>
    <dbReference type="STRING" id="3885.V7CRG9"/>
    <dbReference type="Gramene" id="ESW31953">
        <property type="protein sequence ID" value="ESW31953"/>
        <property type="gene ID" value="PHAVU_002G281800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SIB4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EKMSWST"/>
    <dbReference type="OrthoDB" id="1865198at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47211">
        <property type="entry name" value="TRIHELIX TRANSCRIPTION FACTOR ASR3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47211:SF3">
        <property type="entry name" value="TRIHELIX TRANSCRIPTION FACTOR ASR3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb-like" evidence="2">
        <location>
            <begin position="44"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="185"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="17"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="191"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW31953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="40518" checksum="F3F223B652350DF1" modified="2014-02-19" version="1">MAEESSEKICEGVSESPTTTPVGGQTPPEGDSKTRRIKATRHPRWTRQETLVLIESKKMVESGEQVCRFRSASGFIQSDPKWEMVSSFCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGAKEESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKLENGFAEVVGPEQCKENEEEEEEDEAIVDSEKMSWSTQEENMETNVAANMSNGVLKVPPGFKEKGIAGSLRKTPLLSLHTQEKEKQQQQTPSCQGNYDPCFQTEPVFQHGYKRKLLSSDSSEDNTDFNNSITKLLRRNSDILKTHLGAQNINYQLARDQQKQQTDILVAALGKLTDALTKIADKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRL2</accession>
    <name>V7CRL2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Enoyl reductase (ER) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G277900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRL2"/>
    <dbReference type="SMR" id="V7CRL2"/>
    <dbReference type="STRING" id="3885.V7CRL2"/>
    <dbReference type="Gramene" id="ESW31905">
        <property type="protein sequence ID" value="ESW31905"/>
        <property type="gene ID" value="PHAVU_002G277900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LNWAPSC"/>
    <dbReference type="OrthoDB" id="1879366at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08263">
        <property type="entry name" value="Zn_ADH10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000051">
        <property type="entry name" value="Alcohol dehydrogenase (Zinc)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000068">
        <property type="entry name" value="Sorbitol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43350:SF2">
        <property type="entry name" value="GROES-LIKE ZINC-BINDING ALCOHOL DEHYDROGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43350">
        <property type="entry name" value="NAD-DEPENDENT ALCOHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Enoyl reductase (ER)" evidence="8">
        <location>
            <begin position="68"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="432" mass="45886" checksum="322EB02BA6925628" modified="2014-02-19" version="1">MALAMVRRNVITHYSKFASSWSVLSRHSSIQEPLLASVSSFHSQSVGGGSGGGGGGLPSYMRGAVFWEPNKPLSIEEFNMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPSVLGHEITGEVVEHGALSDSKTIERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVFMYSMGGLAEYCVVPANGVSVLPESLPYPKSAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVNDEKLQKAKIFGATHTVNSAKEDPIEKIYEITGGKGVDVAVEALGKTQTFAQCTLSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLDHAVSRTYTFEEADKAFQDLNEGKIIGRAVIEIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSE6</accession>
    <name>V7CSE6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SHSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G039800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSE6"/>
    <dbReference type="SMR" id="V7CSE6"/>
    <dbReference type="STRING" id="3885.V7CSE6"/>
    <dbReference type="Gramene" id="ESW33059">
        <property type="protein sequence ID" value="ESW33059"/>
        <property type="gene ID" value="PHAVU_001G039800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0710">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KITANCK"/>
    <dbReference type="OrthoDB" id="1431247at2759"/>
    <dbReference type="PhylomeDB" id="V7CSE6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.790:FF:000010">
        <property type="entry name" value="17.3 kDa class II heat shock protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031107">
        <property type="entry name" value="Small_HSP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11527">
        <property type="entry name" value="HEAT-SHOCK PROTEIN 20 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="6">
        <location>
            <begin position="42"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW33059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="158" mass="17768" checksum="B23CDB76995808F4" modified="2014-02-19" version="1">MDLRVMGLESPLFHTLHHIMDMSEEGAGDKAHNAPTRSYVRDAKAVAATPADVKEYPNSYVFQIDMPGLKCGDIKVQVEDDNMLLISGERKREEEKEGAKYLRMERRVGKFMRKFVLPENANTDEISAVCEDGVLSVTVQKLPPPEPKKPRTIEVKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUP2</accession>
    <name>V7CUP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Brf1 TBP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G106000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUP2"/>
    <dbReference type="SMR" id="V7CUP2"/>
    <dbReference type="STRING" id="3885.V7CUP2"/>
    <dbReference type="Gramene" id="ESW33879">
        <property type="protein sequence ID" value="ESW33879"/>
        <property type="gene ID" value="PHAVU_001G106000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33882">
        <property type="protein sequence ID" value="ESW33882"/>
        <property type="gene ID" value="PHAVU_001G106000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33883">
        <property type="protein sequence ID" value="ESW33883"/>
        <property type="gene ID" value="PHAVU_001G106000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1598">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCHYDGR"/>
    <dbReference type="OrthoDB" id="511529at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.650">
        <property type="entry name" value="Single helix bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011665">
        <property type="entry name" value="BRF1_TBP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07741">
        <property type="entry name" value="BRF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Brf1 TBP-binding" evidence="2">
        <location>
            <begin position="30"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="163" mass="18233" checksum="04C01C88A7EA17C1" modified="2014-02-19" version="1">MLSGASVENEATEDGKYDDSHGEDESETLSDIDDSDVDVYLHNEEEKQIKKMLWERVNRVYVTEQEAKEAVAAANKKAFEGNFGNCSEDLLAARELAASSAEAVAKSRKGMKHRRAREAKNIAPTQYAAEAIGQMSNERKSLKSKVNLDRLEELFNDMEEDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXE0</accession>
    <name>V7CXE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Xyloglucan endotransglucosylase/hydrolase</fullName>
            <ecNumber evidence="11">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G179900g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 11">Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Secreted</location>
            <location evidence="11">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Secreted</location>
            <location evidence="11">Extracellular space</location>
            <location evidence="11">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="11">Contains at least one intrachain disulfide bond essential for its enzymatic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="11"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXE0"/>
    <dbReference type="SMR" id="V7CXE0"/>
    <dbReference type="STRING" id="3885.V7CXE0"/>
    <dbReference type="Gramene" id="ESW34774">
        <property type="protein sequence ID" value="ESW34774"/>
        <property type="gene ID" value="PHAVU_001G179900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQC7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MRWVQSH"/>
    <dbReference type="OrthoDB" id="4781at2759"/>
    <dbReference type="PhylomeDB" id="V7CXE0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042546">
        <property type="term" value="P:cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000025">
        <property type="entry name" value="Xyloglucan endotransglucosylase/hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016455">
        <property type="entry name" value="XTH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005604">
        <property type="entry name" value="XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0052">Apoplast</keyword>
    <keyword evidence="1 11" id="KW-0134">Cell wall</keyword>
    <keyword evidence="11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8 11" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 11" id="KW-0732">Signal</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149131" description="Xyloglucan endotransglucosylase/hydrolase" evidence="11">
        <location>
            <begin position="19"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="12">
        <location>
            <begin position="16"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00058567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW34774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="34001" checksum="F2B58FD1E6111A32" modified="2014-02-19" version="1">MALFLFAILIFMVPSSNAYWPPSPGYWPSSKFRSMSFYEGFRNLWGPQHQSLDQNALTIWLDRTSGSGFKSVKPFRSGYFGASIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGRIIGREMKFHLWFDPTQDFHHYAILWSPKEIIFLVDDVPIRRYPRKSSATFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFVAKYSRFKASGCSAYAPRWCHPVSASPYRSGGLTRQQYRTMRWVQRYLMVYNYCQDPKRDHSLTPECWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXQ9</accession>
    <name>V7CXQ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein LAZY 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G088600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXQ9"/>
    <dbReference type="STRING" id="3885.V7CXQ9"/>
    <dbReference type="Gramene" id="ESW33661">
        <property type="protein sequence ID" value="ESW33661"/>
        <property type="gene ID" value="PHAVU_001G088600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R8CH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKLRQSN"/>
    <dbReference type="OrthoDB" id="780166at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009630">
        <property type="term" value="P:gravitropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000012">
        <property type="term" value="P:regulation of auxin polar transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038928">
        <property type="entry name" value="LAZY1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34959">
        <property type="entry name" value="PROTEIN LAZY 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34959:SF4">
        <property type="entry name" value="PROTEIN LAZY 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="316"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="380" mass="43065" checksum="F6BE01C5D87C7DF9" modified="2014-02-19" version="1">MKLFQWVHRKLRQNNIEPFKDSALGNPCTCLTVQPTLDNQYSQTKPCFITQPRFSKSDNQENQISYSGLVDSREDKSQEETPAISSQLFQGFLTIGTLGAETVTDEPGTPTFAMPSKNITMRSEEVTENEIKLISYELEKFLEAEREESFHDSSGRNSYVSTITLGGKEIDGPKAEEYINKAVCPLQGYLLGSSFELPETKQLRKERASLAELLDRTKATSQDCTETGIRSETQVKKTLKSAARHIMRKILKKVCSSSKSCNTSKNDADSASTNKNLHKVLCLFHRKVYPESPINGKDGIKSHKDEIQNVSHEFFHEYDNGKPTNPDKGKRFHPDTRSREWSQHCMTNWNPPQLGQICSSSTGNNEHWIRTDAEYLVLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="65" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYE2</accession>
    <name>V7CYE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Pectinesterase</fullName>
            <ecNumber evidence="9">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G209400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n methanol + n H(+)</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the pectinesterase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="9"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYE2"/>
    <dbReference type="STRING" id="3885.V7CYE2"/>
    <dbReference type="Gramene" id="ESW35129">
        <property type="protein sequence ID" value="ESW35129"/>
        <property type="gene ID" value="PHAVU_001G209400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVXG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIGSKRY"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000001">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31707">
        <property type="entry name" value="PECTINESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="5" id="KW-0134">Cell wall</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="10">
        <location>
            <begin position="88"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="601" mass="66663" checksum="94EE4F7CCADDB55A" modified="2014-02-19" version="1">MATTTHPIYPHNFYHPLHTFQRSTCFHFLSFSSSSFLSAMFNPVSRKTPPMLPHIPCIFSAVHVLLLFSVTQFSITAGATRSLQQNHLHFHVANSTCEGTLYPDLCVSTLTSFPDLTSKTVPEMIRSVVNHTIYEVTLSSSNCSSLRKKLPGLNKLEKRALDDCLNLFDETVEELKTTVKDLSQSTIGSKRYHDSQTFLSGAMTNLYTCLDGFAYSKGNVRDRIEEGVLEISHLVSNSLAMLKKVPEKKKQSKNEVFPEYGKMKDGFPSWVSPNDRKLLQAAVNETKFDLVVAKDGSGNFTTIGAAVAAAPNSSATRFVIHIKAGAYFENVEVIRKKSNLMWVGDGIGKTVVKASRNVVDGWTTFQSATVAVVGDGFIAKGITFENSAGPSKHQAVALRSGADLSAFYQCSFVAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAAVLQNCNLYARKPNPNQKNLFTAQGREDPNQNTGISIINCKVAAAADLIPVKSEFKNYLGRPWKKYSRTVYLNSLMEDLIDPAGWLEWDGNFALDTLYYGEYNNRGPGANTSRRVTWPGYRVITNSTEASQFTVANFIQGNEWLTSLGIPFFSGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYP5</accession>
    <name>V7CYP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">S-adenosylmethionine synthase</fullName>
            <ecNumber evidence="15">2.5.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_001G2166000g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the formation of S-adenosylmethionine from methionine and ATP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="21 15">
            <text>L-methionine + ATP + H2O = S-adenosyl-L-methionine + phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="15">Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="15">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="15">Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 15">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 16">Belongs to the AdoMet synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="15"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYP5"/>
    <dbReference type="STRING" id="3885.V7CYP5"/>
    <dbReference type="Gramene" id="ESW35219">
        <property type="protein sequence ID" value="ESW35219"/>
        <property type="gene ID" value="PHAVU_001G2166000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1506">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AGMARRC"/>
    <dbReference type="OrthoDB" id="5852090at2759"/>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000003">
        <property type="entry name" value="S-adenosylmethionine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000004">
        <property type="entry name" value="S-adenosylmethionine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="S-ADENOSYLMETHIONINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="S-adenosylmethionine synthetase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0170">Cobalt</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 15" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="13 15" id="KW-0630">Potassium</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-adenosylmethionine synthetase central" evidence="17">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="S-adenosylmethionine synthetase C-terminal" evidence="18">
        <location>
            <begin position="86"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="19">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU000541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW35219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="238" mass="26179" checksum="625F257AC82AD92E" modified="2014-02-19" version="1" fragment="single">VRKDGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGFARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKSEKPRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZK5</accession>
    <name>V7CZK5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G172100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZK5"/>
    <dbReference type="STRING" id="3885.V7CZK5"/>
    <dbReference type="Gramene" id="ESW34685">
        <property type="protein sequence ID" value="ESW34685"/>
        <property type="gene ID" value="PHAVU_001G172100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3NQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSCNREK"/>
    <dbReference type="OrthoDB" id="749576at2759"/>
    <dbReference type="PhylomeDB" id="V7CZK5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35304:SF16">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35304">
        <property type="entry name" value="OS05G0120300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="144" mass="16617" checksum="F9F3D15AB8D7E14A" modified="2014-02-19" version="1">MTSVCISNCLNDARDPRVPVRATYVNLYKWPESDAEFVRSVSCNREKGSQVYGHPRVVDSISCRQMYLRSYTFSREEENEGEKTHKCFGVKKKKKKQQNKNSKPETGKRKCLVWSKAKEISCSALSRIFRRVLFCSASVDVVHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7D197</accession>
    <name>V7D197_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">S-adenosylmethionine synthase</fullName>
            <ecNumber evidence="16">2.5.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_001G222800g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="22" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Catalyzes the formation of S-adenosylmethionine from methionine and ATP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15 16">
            <text>L-methionine + ATP + H2O = S-adenosyl-L-methionine + phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="16">Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="16">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="16">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="16">Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 17">Belongs to the AdoMet synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="16"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D197"/>
    <dbReference type="SMR" id="V7D197"/>
    <dbReference type="STRING" id="3885.V7D197"/>
    <dbReference type="Gramene" id="ESW35290">
        <property type="protein sequence ID" value="ESW35290"/>
        <property type="gene ID" value="PHAVU_001G222800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35291">
        <property type="protein sequence ID" value="ESW35291"/>
        <property type="gene ID" value="PHAVU_001G222800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1506">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAQIHFV"/>
    <dbReference type="OrthoDB" id="5852090at2759"/>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd18079">
        <property type="entry name" value="S-AdoMet_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000001">
        <property type="entry name" value="S-adenosylmethionine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000003">
        <property type="entry name" value="S-adenosylmethionine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000004">
        <property type="entry name" value="S-adenosylmethionine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00086">
        <property type="entry name" value="S_AdoMet_synth1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="S-ADENOSYLMETHIONINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000497">
        <property type="entry name" value="MAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="S-adenosylmethionine synthetase"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0170">Cobalt</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12 16" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 16" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="13 16" id="KW-0630">Potassium</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 16" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-adenosylmethionine synthetase N-terminal" evidence="18">
        <location>
            <begin position="4"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="S-adenosylmethionine synthetase central" evidence="19">
        <location>
            <begin position="117"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="S-adenosylmethionine synthetase C-terminal" evidence="20">
        <location>
            <begin position="240"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00048344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW35290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="393" mass="43104" checksum="ACBE6B0CAEA0EBF8" modified="2014-02-19" version="1">MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVYLEQQSPDIAQGVHGHLTKQPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCTWLRPDGKTQVTVEYYNDNGVMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASALARRCVVQISYAIGVPDPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISISLDLKRGGNGRFLKTAAYGHFGREDTDFTWEVVKSLKWEKPQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1H8</accession>
    <name>V7D1H8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G202500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1H8"/>
    <dbReference type="Gramene" id="ESW35051">
        <property type="protein sequence ID" value="ESW35051"/>
        <property type="gene ID" value="PHAVU_001G202500g"/>
    </dbReference>
    <dbReference type="OMA" id="VSSCFYC"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="9330" checksum="F1E15E0C42B91707" modified="2014-02-19" version="1">MGPGGPGGPGPGGGPGWGPGPGGPGWGPGPGGPGWGPGPGGPGWGPGPGGPGFFGPGGFFGGCADGICGLLSSCFYCLCCCCLFQDCFGRHGPGPGMPPPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7D221</accession>
    <name>V7D221_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">proline--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.15</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Prolyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G218300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Pro) + L-proline + ATP = L-prolyl-tRNA(Pro) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:14305"/>
            <dbReference type="Rhea" id="RHEA-COMP:9700"/>
            <dbReference type="Rhea" id="RHEA-COMP:9702"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78532"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.15"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="6.1.1.15" evidence="1"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D221"/>
    <dbReference type="SMR" id="V7D221"/>
    <dbReference type="STRING" id="3885.V7D221"/>
    <dbReference type="Gramene" id="ESW35241">
        <property type="protein sequence ID" value="ESW35241"/>
        <property type="gene ID" value="PHAVU_001G218300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4163">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCDEVDV"/>
    <dbReference type="OrthoDB" id="1350766at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017101">
        <property type="term" value="C:aminoacyl-tRNA synthetase multienzyme complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004827">
        <property type="term" value="F:proline-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006433">
        <property type="term" value="P:prolyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00862">
        <property type="entry name" value="ProRS_anticodon_zinc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00778">
        <property type="entry name" value="ProRS_core_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.930.10:FF:000007">
        <property type="entry name" value="Bifunctional glutamate/proline--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.800:FF:000005">
        <property type="entry name" value="bifunctional glutamate/proline--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.110.30:FF:000003">
        <property type="entry name" value="Proline--tRNA ligase, cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="entry name" value="Anticodon-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.30">
        <property type="entry name" value="C-terminal domain of ProRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01571">
        <property type="entry name" value="Pro_tRNA_synth_type3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002316">
        <property type="entry name" value="Pro-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004499">
        <property type="entry name" value="Pro-tRNA-ligase_IIa_arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016061">
        <property type="entry name" value="Pro-tRNA_ligase_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017449">
        <property type="entry name" value="Pro-tRNA_synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033721">
        <property type="entry name" value="ProRS_core_arch_euk"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00408">
        <property type="entry name" value="proS_fam_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382:SF2">
        <property type="entry name" value="BIFUNCTIONAL GLUTAMATE_PROLINE--TRNA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43382">
        <property type="entry name" value="PROLYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09180">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01046">
        <property type="entry name" value="TRNASYNTHPRO"/>
    </dbReference>
    <dbReference type="SMART" id="SM00946">
        <property type="entry name" value="ProRS-C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64586">
        <property type="entry name" value="C-terminal domain of ProRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-transfer RNA synthetases class-II family profile" evidence="10">
        <location>
            <begin position="92"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="510" mass="58020" checksum="9D5180A9C88EABD2" modified="2014-02-19" version="1">MAGTEAKKPSAKQSGAKKKEVKKETGLGLTHRKADNFGEWYSEVVVNAEMIEYYDISGCYILRPWSMAIWEIMQEFFDPEIKKMKIKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLDILELYRRIYEEYLAVPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENDKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDANTQGIYDACSATVNALSEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNGAKIDIASADLAVEIQKLLDNIQQNLFDVAKQKRDECIQVIHTWDEFVQALNQRKMILAPWCDEEEVEADVKARTKGEMGASKTLCSPFDQPELPEGIKCFASGKPATKWTYWGRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AD21</accession>
    <name>V7AD21_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G013600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AD21"/>
    <dbReference type="SMR" id="V7AD21"/>
    <dbReference type="STRING" id="3885.V7AD21"/>
    <dbReference type="Gramene" id="ESW03432">
        <property type="protein sequence ID" value="ESW03432"/>
        <property type="gene ID" value="PHAVU_011G013600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUXA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VKWRITM"/>
    <dbReference type="OrthoDB" id="1936865at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010333">
        <property type="term" value="F:terpene synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016102">
        <property type="term" value="P:diterpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00684">
        <property type="entry name" value="Terpene_cyclase_plant_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.600.10:FF:000007">
        <property type="entry name" value="Isoprene synthase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.130">
        <property type="entry name" value="Terpene synthase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034741">
        <property type="entry name" value="Terpene_cyclase-like_1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044814">
        <property type="entry name" value="Terpene_cyclase_plant_C1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001906">
        <property type="entry name" value="Terpene_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036965">
        <property type="entry name" value="Terpene_synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050148">
        <property type="entry name" value="Terpene_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005630">
        <property type="entry name" value="Terpene_synthase_metal-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31225:SF94">
        <property type="entry name" value="ALPHA-FARNESENE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31225">
        <property type="entry name" value="OS04G0344100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01397">
        <property type="entry name" value="Terpene_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03936">
        <property type="entry name" value="Terpene_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00005">
        <property type="entry name" value="Isoprenoid_Synthase_Type_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01019">
        <property type="entry name" value="Terpene_Cyclase_Like_1_C_Termi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Terpene synthase N-terminal" evidence="5">
        <location>
            <begin position="24"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Terpene synthase metal-binding" evidence="6">
        <location>
            <begin position="262"/>
            <end position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="559" mass="64685" checksum="6D94C9AACDFA3F89" modified="2014-02-19" version="1">MSQSNFNLSSQILSRRSAHYKPNIWKYQFLQSLGSKYHKDEFVAVLNKRMMEVKSVFVQEKDIFKKLELVDWIQKLGLANHFQKEINGFLESLAVHVKTSTFNLSSEHLHLSALSFRLLRNHGYAVLPDILSKFLDKKGDVMRTISPHVGDVKDVVELLEASHLGLEGEKIMDEAKICATNSLNSIKKDQLSNNVDVERMVHSLELPSHWRVQWFEVKWHIKQYNKEKNMDPILLEMSKLNFNMIQATLQLELKELSRWWENLSIKEELSFARNRLVESFMCAAGVAFEPKYKSIRKWLTKVIVLVLVIDDVYDIHASFEELKPFTMAFERWDDTELEELPTYMRTCIHALQDVTNEIAYEVGGEHNFHLVLTYLKKTWIEFCKALYKEAKWYNMGYIPSLQEYLSNAWISSSGPVILLHSYLGTMYQVKDSMDHFLQTYEDLVYNVSLVIRLCNDLGTSVAERERGDAASSIVCYMNEKGVSEVKARKHIQDKILEAWKKINKKCFASSSSSCCVEPFVTQAINAARVAHTLYQNGDGFGIQDKDIKKHILSLVVEPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEP5</accession>
    <name>V7AEP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Histone-binding protein RBBP4-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G035800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEP5"/>
    <dbReference type="SMR" id="V7AEP5"/>
    <dbReference type="STRING" id="3885.V7AEP5"/>
    <dbReference type="Gramene" id="ESW03710">
        <property type="protein sequence ID" value="ESW03710"/>
        <property type="gene ID" value="PHAVU_011G035800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0264">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVFDSHE"/>
    <dbReference type="OrthoDB" id="427795at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006325">
        <property type="term" value="P:chromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000512">
        <property type="entry name" value="WD-40 repeat-containing protein MSI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022052">
        <property type="entry name" value="Histone-bd_RBBP4-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050459">
        <property type="entry name" value="WD_repeat_RBAP46/RBAP48/MSI1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22850">
        <property type="entry name" value="WD40 REPEAT FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12265">
        <property type="entry name" value="CAF1C_H4-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="Histone-binding protein RBBP4-like N-terminal" evidence="8">
        <location>
            <begin position="12"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="155"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="204"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="291"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="400" mass="44984" checksum="E5780A0BE3E52A2D" modified="2014-02-19" version="1">MAEEYNEGEVEEEFSVWKKNTPLLYDLFISQPLQWPSLTVHWLPSSPQSHFHPSFNIHKLLLATHTAQGDPNFLMLADASLPIDTSQPIVATDPDHLVLPKVEISQRVAVDGEVNRARSMPQNPSIVAAKTCNSEVYVFDFNKQRGSEFAPDLRLRGHDKEGYGLSWSPFKSGYLLSGSHDHKICLWDVPAASQESVLDAIHVYEGHESAVEDVSWSMKDENLFGSVGDDCKLVIWDLRTNKPQQSVKPHENEVNFLSFSPYNEWILATASSDTTVGLFDTRKLEIPLHVLSSHSDEVFQVEWDPNHETVLASSGADRRLMVWDLNRVGDEQIEGDGEGGPPELLFSHGGHKAKISDFSWNINQPWVISSVAEDNSFHVWQMGESIYNDGDDDNMWTASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGB9</accession>
    <name>V7AGB9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G0501000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGB9"/>
    <dbReference type="STRING" id="3885.V7AGB9"/>
    <dbReference type="Gramene" id="ESW03890">
        <property type="protein sequence ID" value="ESW03890"/>
        <property type="gene ID" value="PHAVU_011G0501000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW03891">
        <property type="protein sequence ID" value="ESW03891"/>
        <property type="gene ID" value="PHAVU_011G0501000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW03892">
        <property type="protein sequence ID" value="ESW03892"/>
        <property type="gene ID" value="PHAVU_011G0501000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW03893">
        <property type="protein sequence ID" value="ESW03893"/>
        <property type="gene ID" value="PHAVU_011G0501000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCLKFPA"/>
    <dbReference type="OrthoDB" id="5817230at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053057">
        <property type="entry name" value="XLG_GTP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36486">
        <property type="entry name" value="OS01G0977800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36486:SF4">
        <property type="entry name" value="PH DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="80"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="83"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="125"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="136"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW03893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="248" mass="27550" checksum="791FDBEE638857AF" modified="2014-02-19" version="1" fragment="single">MASLLKSLRPGVPSVHDAGDDFSYEYSFAEEYKGPPLSYSIPEVLPFNLDQIPLAPVAHSPPHNLSLPVIQPFRKTNAELASRASSVSSNPLSCKEEDHDDDDDDPVSPKHVKRPSVVTFRDPETNEIVDDEEIVESVSGESNSNNSNSNNNRVRPHAERGGKKGSCYRCLKGSRLTEREVCIVCGAKFCRNCVLRAMGSMSEGRKCVTCIGYRIDEEKRGNLGKPSRMLKYLLSKGEVKQIMKDEMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGZ9</accession>
    <name>V7AGZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Aconitate hydratase</fullName>
            <shortName evidence="9">Aconitase</shortName>
            <ecNumber evidence="3 9">4.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G1037001g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>citrate = D-threo-isocitrate</text>
            <dbReference type="Rhea" id="RHEA:10336"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="EC" id="4.2.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the aconitase/IPM isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.3" evidence="3 9"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGZ9"/>
    <dbReference type="STRING" id="3885.V7AGZ9"/>
    <dbReference type="Gramene" id="ESW04540">
        <property type="protein sequence ID" value="ESW04540"/>
        <property type="gene ID" value="PHAVU_011G1037001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0452">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NGGIMQY"/>
    <dbReference type="OrthoDB" id="2224430at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003994">
        <property type="term" value="F:aconitate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043436">
        <property type="term" value="P:oxoacid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01586">
        <property type="entry name" value="AcnA_IRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.499.10:FF:000002">
        <property type="entry name" value="Aconitate hydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.499.10:FF:000005">
        <property type="entry name" value="cytoplasmic aconitate hydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="entry name" value="Aconitase, domain 3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="entry name" value="Aconitase, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006249">
        <property type="entry name" value="Aconitase/IRP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01341">
        <property type="entry name" value="aconitase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006757">
        <property type="entry name" value="PRK09277.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF009520">
        <property type="entry name" value="PRK12881.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11670">
        <property type="entry name" value="ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="Aconitase iron-sulfur domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52016">
        <property type="entry name" value="LeuD/IlvD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 9" id="KW-0408">Iron</keyword>
    <keyword evidence="6 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase/3-isopropylmalate dehydratase large subunit alpha/beta/alpha" evidence="10">
        <location>
            <begin position="150"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase A/isopropylmalate dehydratase small subunit swivel" evidence="11">
        <location>
            <begin position="781"/>
            <end position="846"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="846"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW04540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="846" mass="92791" checksum="107F6DAEBB2817A0" modified="2014-02-19" version="1" fragment="single">MCETTPSSSASSLLRATTPKLISSSPSRTFAFPPSFTPYSSRNSLRSSLPQWSHRLRRVSPLTLRRPIRAVAPPVERFHREIAATAKENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVKKEDVEKILAWEINSNKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRENKLFVDYNEPQQERVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKDDWHACLDNNVGFKGFAIPKEAQGKVAKFNFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFHIVGFGCTTCIGNSGELNESVSSAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFENEPIGTSKDGKNVYLRDIWPSTEEIAEAVQSSVLPDMFRSTYEAVTKGNPMWNQLKVPADTLYSWDPNSTYIHEPPYFKNMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHVPTGEKLSVFEAAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHA9</accession>
    <name>V7AHA9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">FAS1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G077400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May be a cell surface adhesion protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the fasciclin-like AGP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHA9"/>
    <dbReference type="SMR" id="V7AHA9"/>
    <dbReference type="STRING" id="3885.V7AHA9"/>
    <dbReference type="Gramene" id="ESW04228">
        <property type="protein sequence ID" value="ESW04228"/>
        <property type="gene ID" value="PHAVU_011G077400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ1S">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFVAKPP"/>
    <dbReference type="OrthoDB" id="286301at2759"/>
    <dbReference type="PhylomeDB" id="V7AHA9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009834">
        <property type="term" value="P:plant-type secondary cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.180.10:FF:000009">
        <property type="entry name" value="Fasciclin-like arabinogalactan protein 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045003">
        <property type="entry name" value="FLA_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32077">
        <property type="entry name" value="FASCICLIN-LIKE ARABINOGALACTAN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32077:SF81">
        <property type="entry name" value="FASCICLIN-LIKE ARABINOGALACTAN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753357" description="FAS1 domain-containing protein" evidence="9">
        <location>
            <begin position="30"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="10">
        <location>
            <begin position="56"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="211"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="218"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="263" mass="27848" checksum="3CD902DB8D7171B3" modified="2014-02-19" version="1">MVIMNPPLFSLTLPLLIILLFSHSTISLAQSPAAAPTAPATPTTAITPAPVPSSPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTTNGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTFVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGIVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKSKGSKKKSADSTETPADDAESAAISVKQQHVTWAAALLVAAFSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHM7</accession>
    <name>V7AHM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="16">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_011G149500g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 24">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="16">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="16"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHM7"/>
    <dbReference type="Gramene" id="ESW05069">
        <property type="protein sequence ID" value="ESW05069"/>
        <property type="gene ID" value="PHAVU_011G149500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS2H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SICNPKA"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000924">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021820">
        <property type="entry name" value="S-locus_recpt_kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF1075">
        <property type="entry name" value="RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11883">
        <property type="entry name" value="DUF3403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00473">
        <property type="entry name" value="PAN_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="13" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 16" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 18" id="KW-0732">Signal</keyword>
    <keyword evidence="4 16" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753399" description="Receptor-like serine/threonine-protein kinase" evidence="18">
        <location>
            <begin position="25"/>
            <end position="797"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="438"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="20">
        <location>
            <begin position="28"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="21">
        <location>
            <begin position="324"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="19">
        <location>
            <begin position="464"/>
            <end position="755"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW05069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="797" mass="90059" checksum="1BFA8C6F5DDB7D89" modified="2014-02-19" version="1">MTLTSSTLASLTSFLCLFMFCVNAVTNKEFLQIGQSLGILDSVASHSGKFELCFFTKVRDNSTKYYVGIRYKRVPNDKNKIVWVANRDYALETSSAVLTIQPDGNFVIMDGQVTYRVNKVSNNFSTYAMLLDSGNLVLLKTSNKEILWQSFDYPTDTLLPGMKLGQDEGYNTTWSLRSWISADDPAPGAFTLQYDSGMISLIIDNGSNVFWIDDSYNYTIGNVIRRTGVEEHDRYFTFPVGNDSRLVLEVSGELNQEYWLDEAQFWVSIQSSKCGTKNSCGAFSICNPKARDPCDCTDGFRPFDADYKGNKSAGCVRKKELSSCSNGVESNDKFKQLYQVKWPPTPDSYKTLKIDTARGCERTCSTNCSCVAFAYYLNGNCQLWLGSVLNLKNVSTDVDNSDDSNPIFYLRLAASEFVTSDSNATRDKGPESNVRKNLLVIVILISLLTSLILGLLLVHWIRRKRRKEQIIYTQYKQLLRFRPIEIDYIGHKGILFNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERNEKMLIYEFMPNKSLDLFLFTDEKKRMLDWLTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMAKIFGENELQENTNRIVGTYGYMAPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTGSFNLLGYAWDLWTSNSGMDLMDTALDDSDTSSNCMHTVPRYVNMGLLCVQESPEDRPTMSDVVAMIGNDTVPLPSPKPPAFLKLRGDDSSTLPCRMTESLSVNGMTDTIVQAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIJ1</accession>
    <name>V7AIJ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF1421 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G113900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIJ1"/>
    <dbReference type="SMR" id="V7AIJ1"/>
    <dbReference type="STRING" id="3885.V7AIJ1"/>
    <dbReference type="Gramene" id="ESW04653">
        <property type="protein sequence ID" value="ESW04653"/>
        <property type="gene ID" value="PHAVU_011G113900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPU7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HPYSDLI"/>
    <dbReference type="OrthoDB" id="549883at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010820">
        <property type="entry name" value="DUF1421"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31805:SF16">
        <property type="entry name" value="FORMIN-LIKE PROTEIN (DUF1421)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31805">
        <property type="entry name" value="RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07223">
        <property type="entry name" value="DUF1421"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1421" evidence="2">
        <location>
            <begin position="487"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="160"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="213"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="269"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="179"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="213"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="237"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="280"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="339"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="351"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="459"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="541" mass="59752" checksum="2C487E4C2BB26E79" modified="2014-02-19" version="1">MASGSSGRGNSGSKGFDFGSDDILCSYDDYANRDSSSNGNHADPDFHKARMSRTSMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLTRDNVEQDSRLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQHAQKESSSSSHSQSNEERSSPTTDPKKTDNASESNNQQLALALPHQIAPHQQPAAPPAQAQAPAPAQTQAPQQPPYYMPPTPLQNTPVAQLPQNQYLPSEQQYRTPQLVAPQPTPSQVTPSPPVQQFSHYQQQQQQPQQQQLQQQQPQQQQLQQQWSQQVPSPQPPSMQSQTRPPSPAMYPPYQPNQASNPSAAETLPNSMPMQGPYSGVPPPGSSRPDTIPYGYGGSGRTVPQQPPPQQMKSSFPAPPGEMYGPTGSLAALPPSSAYMMYEGEGGRTHHPPQPHFTQPGYPPTSASLQNPPSHNLMVRNPNQSQFVRNHPYSELIEKLVSMGFRGDHVMSVIQRMEESGQAIDFNSVLDRLNVHSSVGPPRGWSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIS3</accession>
    <name>V7AIS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G059300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Interacts with the poly(A) tail of mRNA in nucleus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasmic granule</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the polyadenylate-binding RBP47 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIS3"/>
    <dbReference type="STRING" id="3885.V7AIS3"/>
    <dbReference type="Gramene" id="ESW04006">
        <property type="protein sequence ID" value="ESW04006"/>
        <property type="gene ID" value="PHAVU_011G059300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENAIVHI"/>
    <dbReference type="OrthoDB" id="446113at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd12344">
        <property type="entry name" value="RRM1_SECp43_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12345">
        <property type="entry name" value="RRM2_SECp43_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000405">
        <property type="entry name" value="polyadenylate-binding protein RBP45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000103">
        <property type="entry name" value="Polyadenylate-binding protein RBP47B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000144">
        <property type="entry name" value="Polyadenylate-binding protein RBP47B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050825">
        <property type="entry name" value="RBM42_RBP45_47-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47640:SF10">
        <property type="entry name" value="TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47640">
        <property type="entry name" value="TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 10" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="11">
        <location>
            <begin position="10"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="11">
        <location>
            <begin position="97"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="11">
        <location>
            <begin position="214"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00057395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00061069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00063471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW04006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="401" mass="44334" checksum="481660BE516541FF" modified="2014-02-19" version="1">MASTAIEEVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKMTGQPEGYGFVEFVSHAAAEAFLRTYNGTQMPGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRTHYPSVKGAKVVTDPATGRSKGYGFVKFTDEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQNQYAPPKAMYQFPAYTAPVNTVAPENDVNNTTICIGNLDLNVTEDELKQTFMQFGDIVSVKIYAGKGYGYVQFGTRESSEDAIQRMQGKIIGQQVIQISWASTLTARQDVPNGWGAQIDPNQWSAYYGYGQGYEAYAYGAAHDPSLYAYGAYAGYAAQYPQQVEGGQDMSVCMPVEESYDPLSLPDVDKLNAAYLSTHGSSILGRSLWQRTSQSLQQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ71</accession>
    <name>V7AJ71_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_011G194700g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16 24">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ71"/>
    <dbReference type="SMR" id="V7AJ71"/>
    <dbReference type="STRING" id="3885.V7AJ71"/>
    <dbReference type="Gramene" id="ESW05614">
        <property type="protein sequence ID" value="ESW05614"/>
        <property type="gene ID" value="PHAVU_011G194700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWDY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIFPECC"/>
    <dbReference type="OrthoDB" id="1410185at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000467">
        <property type="entry name" value="Liguleless narrow1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF970">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-0675">Receptor</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 19" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753262" description="non-specific serine/threonine protein kinase" evidence="19">
        <location>
            <begin position="29"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="265"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="29"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="21">
        <location>
            <begin position="144"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="322"/>
            <end position="609"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW05614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="641" mass="72225" checksum="2FDE607E4F8848A4" modified="2014-02-19" version="1">MGMKTTKMMIPIRVVLSFMLLLFITASAQVPIYMNNFCDNSTSVSPSYKANVDTFLSWVTTDSYKGDGYNYTTVNNNNHNNDDDAVYGLYSCRYDITGYFCQFCITTASKELSQRCPNTVRGIIWYDVCIIRYSNQNFIGKVSLTPIWNTTGTRKIKDSSEVKKAEDSMQSLIRKATVESKTFWAVEEFEWIDNEKRYGWVQCDRVIENDECGECLHATLDIFPECCSTNVQWAIFGPSCSIRMDDQNLYQNSGNGGISSKSRKLIISFSVLGAIALLCFSVYCFWYRKRVRKDKMMLDEEKLNGDLPTIPLIAVLHSTNNFSEAFKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSQEFKNEVMFIAKLQHRNLVRLLGCCLEENEKILVYEYMCNSSLDFHLFGDDEKRKQLGWRLRLSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEIGQNQANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNSGFHRAEHGQSLLLYAWSIWCAGKCLELMDPALIKSFIASEVVKCLHIGLLCVQQDAADRPTMSTVVLMLGSESMALPKPNHPAFSVGKLTSKEASASRSTKNLSINDVTVSTDLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJZ1</accession>
    <name>V7AJZ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G215200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJZ1"/>
    <dbReference type="STRING" id="3885.V7AJZ1"/>
    <dbReference type="Gramene" id="ESW05854">
        <property type="protein sequence ID" value="ESW05854"/>
        <property type="gene ID" value="PHAVU_011G215200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05855">
        <property type="protein sequence ID" value="ESW05855"/>
        <property type="gene ID" value="PHAVU_011G215200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05856">
        <property type="protein sequence ID" value="ESW05856"/>
        <property type="gene ID" value="PHAVU_011G215200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4270">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MWQQGDS"/>
    <dbReference type="OrthoDB" id="19923at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47367">
        <property type="entry name" value="AUXIN-REGULATED PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47367:SF1">
        <property type="entry name" value="OS07G0486500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho-GAP" evidence="1">
        <location>
            <begin position="139"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="378" mass="41798" checksum="53B622286E840E65" modified="2014-02-19" version="1">MPSIMSPQWQDKAAGFLSSSGVKLKEAKESAGTFVGEVTKDTKSNVSEVAGRVGSMVKSRWALLQQPSTRHAVQDRLISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQDYCKPIPQILVNCADYLIVSGLNSPYLFKSEGNKRVIQQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRGARSSIYSTRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKMDARTLAIEMAPVIMWQKESRPEFYRQYWNQMSKSPSEKSVDTPLDNTAWDMLADDGEAIDASSPIPLDDGTPVDFGAIEVIQLLVEHHNAIFTDANETVWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL29</accession>
    <name>V7AL29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G191400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL29"/>
    <dbReference type="SMR" id="V7AL29"/>
    <dbReference type="Gramene" id="ESW05578">
        <property type="protein sequence ID" value="ESW05578"/>
        <property type="gene ID" value="PHAVU_011G191400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIERWEE"/>
    <dbReference type="OrthoDB" id="1733640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="8">
        <location>
            <begin position="14"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="7">
        <location>
            <begin position="172"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="9">
        <location>
            <begin position="428"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="10">
        <location>
            <begin position="680"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="42"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW05578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1196" mass="136826" checksum="FA3CA5A400936EC3" modified="2014-02-19" version="1">MPVIETLGGALFGAVLQVLFDRLDSRQVVDYFRGKKLDVKLLKKLKRKLVSVKAVVDDAEQKQFRDTYVKAWLDGVRDVLLDAEDLMEEIEYEFSRYELEVEPQSSSSKVCSFESRIVEVLDDLKSLLSQKDDLGLKNASGVGVGLGLSSNVSRKLPSTSLVVENVIYGRDDEKEMILKWMTSDTEEHSQLSILSVVGMGGMGKTTLVQHVYNDPLIEGKFAIKGWVCVSDEFDVFMVTKAIVGAITKSKDDSVDLEMVQGRLKEKLAGKRFLLVLDDVWNEHRDQWKSLQTPLKYGVKGSTILITTRSNKVASIMESNNIHQLRQLQKDHSWQVFAKHAFRDDNSKSNYVLEEIGMKIVEKCQGLPLALETIGCILQSKSSVSEWEDVLRSNIWDFPIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHKYDKKSLILLWMGENFLQSSQQSKSPEEVGEQYFNDLLSRSFFHHSIWYKVTCFVMHDLLNDLAKYVSGEIFYRLGVDRPGSVSKTTRHFSNANNRVECDEYRSLCDAKRLRTFLSISTDCGMSVQELISNFKFLRLLSLSYCRNIKEVPDTIANLIHLRSLDLSHTYIERLPDSTCSLCNLRVLKLNYCKFLKELPSTLHELSNLRYLELKETTLRKTPVLLGKLKNLQVWMGGFKVGKSSSEFNIQQLGQLDLRGKLLIKNLENIVNPCDALAADLKNKTHLVDLNLTWKFKRNNEDSIKEREVLENLQPCRHLEQLSIFNYSGPQFPRWLSDTFLLNVRSLGLYNCKYCQWLPSLGLLTFLKHLEIEGLDEIVRIDADFYGNNSSTFASLETLSFTNMKEWEEWQCMTGAFPHLQDLSVTNCPKLKGHLPNLPHLKNLCIKSCKQLVASTTRVVENEDVKMETSSFDMIGHHLESLSIFICPGMNIPINHCYHFLIQLHILQCCDSLTNFPLDLFPRLCNLDLGNCRNLQIISQGHPHLHLKSLSIQHCSEFESFPNEGLFGPQLKRFCIIGMEKLKSMPKRMFALLPSLHYLSIRDCPGVELSEGCLPSNLKEMRLLNCSKLVASLKKGVWETNTSLKFLYIQKGDVECFPDEGLLPLSLTDLIIKDCPNLKKLDYKGLCHLSSLRKLVLENCPILQCLPDEGLSESISQLRITDCPLLKQRYKKEEGEDWEKIAHIKTIWITNRKRVNIEDEAEIGNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMV7</accession>
    <name>V7AMV7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein SCAR</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Protein WAVE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G061900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
            <location evidence="2">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the SCAR/WAVE family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7AMV7"/>
    <dbReference type="Gramene" id="ESW06610">
        <property type="protein sequence ID" value="ESW06610"/>
        <property type="gene ID" value="PHAVU_010G061900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTI6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHSSFYT"/>
    <dbReference type="OrthoDB" id="1929108at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003779">
        <property type="term" value="F:actin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071933">
        <property type="term" value="F:Arp2/3 complex binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034237">
        <property type="term" value="F:protein kinase A regulatory subunit binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030036">
        <property type="term" value="P:actin cytoskeleton organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000601">
        <property type="term" value="P:positive regulation of Arp2/3 complex-mediated actin nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.150">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028288">
        <property type="entry name" value="SCAR/WAVE_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003124">
        <property type="entry name" value="WH2_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12902">
        <property type="entry name" value="WASP-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12902:SF1">
        <property type="entry name" value="WISKOTT-ALDRICH SYNDROME PROTEIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51082">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WH2" evidence="4">
        <location>
            <begin position="1648"/>
            <end position="1666"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="415"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="637"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="824"/>
            <end position="846"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1088"/>
            <end position="1109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1456"/>
            <end position="1485"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1586"/>
            <end position="1613"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="420"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="434"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="467"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="637"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="662"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1097"/>
            <end position="1108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1592"/>
            <end position="1605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU367034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1710" mass="187801" checksum="4340B7D4DBE04E45" modified="2014-02-19" version="1">MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMVTAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGGIDWHPNLQSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKIESTSPVNATIEVQREKRIRKIKLKKGARLRDGEAPNVVPSHSKLHQLLLEERIENGYSNPARLVKLKKRQLNGPAVEADVGKSYMEKFLETRSPDQKMVCETSIFPLPVKLTSDDTSETGIKILEISSISPVKRSKGNKNTYSSLDEQDLELKSFSEMNGGTDGDPVKVKEEISSGVTLHISSNNRKLLDVAQLAIDERRKIEGNLDGYHSDDVTSEVDNYMDALTTMESELDTDNEYKPKNRFLNVQKETNTKDKEERQLQAHFSDSQSFGESSMSDDSSSFKQDRNEELIKVQAKSSDSQSTGTSSSLDDNSSLRRDINGQHIELQAHLSDYRSVGNSSTSDKHVSFMKNRSYLPQSDSSSTVIENTPEPSLFTNAKYYGPVVADVPSNQLPQNVEFQHTDCRRSVMHDDAAVHEEEISDSRQACSDRTTSGQWLCSDTGYTSQVVIPAGTESGETSSDPVELKLRLDGDDADKTQEDDAGRTGDDDDDDAGRTGDDDADRKGLAESITSKPVSLSLIKDNACPMNSSDKTSIDNLDDDNPCIHSDDLLQVSNDLGFAHGDESNSHSEIKMFQAGPTDENISEILANRDIDSPGEDPVCLSTKELKVNSGAVLAPEFHDTKDQGSTTATQLNTETVVKVPSMSCFTGVLSSDSIQNKTQEEPGSEEIEVSNPDLASEVDEVPKMVHDDETNGSTCSVDPVEVDSRFKHPSSDNHVMVNDLVTENVQSEDQRVYSVPCVYSAENGVGVITSLVSNQTSPSRGSSDSEEPLLNTHSYKMDLKSNEVELMQSAMDTNAEANENQLAPLLDLTSSDVINSATGNIAKLEESLPIFADSQEREVDEAVSRESTELEDQKIVDQPEIASMDAKLNLNKIVPCDLSDSGTCNIQKFQHSAFVDDAETVPEFSGLDAQQSESIFNGQHDPLQNGRDSFSSPSGNQWGPEADLDLFSKSQIGELVEEYPLRDERNFASEKSQYQKMQYLLEQESNHATSEYVSEIHADEPSPFYSLPHSSSQNAAKLVMDPLMPLLPSHFPKATQNNLDEMPPLPPLPPMQWRMGKVQNASLPSHREELEVSQASVQPIRLDKTSLFGVPISERETSLYQHPFLPVMAVESDKLEHSSGFPVGVSGHPVAIPFQFPIMVNESKGQYNYLFLERNQIPNPFLSLPVASTGMSPHGLIVAPEGKVMQNSNPFVPVPAAAYAVSVHDSIPTEESSTQPPHKLMLETRSDDKSLQQSMTNMVSMDGPPNGHAIDSGGEIVLNSNPCPTIPPAECALSGQDFVSAEEKLPQPPSQLMMEPSSDDKTLKQSVTDGVPMDSPDIHIVASDGEMEQSSNPEPPIPPVECAVPGPGHDSIISEGKLTLPPSQLMSGTSSEVQTLQQSMHNLEGEQECLPISFMSANMESMEPNQSFATNEGGMTMSLDTSDHTSDVESERTNGKPKSKLLRPRNPLIDAVAAHDKSKLRRVTERVMPQIAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKLAAILEKANAIRQALAGSDEDDDADWSDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMY6</accession>
    <name>V7AMY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G186200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEFL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMY6"/>
    <dbReference type="Gramene" id="ESW05516">
        <property type="protein sequence ID" value="ESW05516"/>
        <property type="gene ID" value="PHAVU_011G186200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1430009at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031640">
        <property type="term" value="P:killing of cells of another organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010851">
        <property type="entry name" value="DEFL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07333">
        <property type="entry name" value="SLR1-BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0295">Fungicide</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755767" description="Knottin scorpion toxin-like domain-containing protein" evidence="6">
        <location>
            <begin position="24"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="73" mass="8136" checksum="905DBFCADF16CA79" modified="2014-02-19" version="1">MKFITSVLILLLVLTIEIENEGAMKVVEAGRCEEKLNEDCQESKCDSDCVRKHGNLASGRCNAIEDCICRFPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ45</accession>
    <name>V7AQ45_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G039500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ45"/>
    <dbReference type="Gramene" id="ESW06336">
        <property type="protein sequence ID" value="ESW06336"/>
        <property type="gene ID" value="PHAVU_010G039500g"/>
    </dbReference>
    <dbReference type="OMA" id="CFAPRNT"/>
    <dbReference type="OrthoDB" id="10417099at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="140" mass="15509" checksum="10300EFEE0035306" modified="2014-02-19" version="1">MNQAKNLSSFSSSRMSLTPLFLRAFITAQTLVWFLNPFFPTSLPMPSTLSLLANTSPTTVAALALQDLPHSSDSLMVCSAVDDVATIRPLLLSTTFAVIYFNDMNSLRTYRFITGIFNCLIEDGKPSMKISLIKTKQHQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARY3</accession>
    <name>V7ARY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G091700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06971">
        <property type="protein sequence ID" value="ESW06971"/>
        <property type="gene ID" value="PHAVU_010G091700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GCQKLHS"/>
    <dbReference type="OrthoDB" id="1747797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057135">
        <property type="entry name" value="At4g27190-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF196">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23247">
        <property type="entry name" value="LRR_RPS2"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="165"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="625"/>
            <end position="746"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="886"/>
            <end position="981"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="1095"/>
            <end position="1237"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="1451"/>
            <end position="1552"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="1600"/>
            <end position="1747"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="1871"/>
            <end position="1959"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="1962"/>
            <end position="2065"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="2117"/>
            <end position="2247"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein At4g27190-like leucine-rich repeats" evidence="7">
        <location>
            <begin position="2357"/>
            <end position="2493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2540" mass="289897" checksum="0E07B4D0AD43C39D" modified="2014-02-19" version="1">MASLVTCYEFLTSSPRAKAWLKKHLIQLYKYEARVREVEGVVTKLQKKRDTIQHTVDEEERRHGRKIHVEVKEWIESVDKLILAYKDFDEDKNCHKCAVFDFFESGYLPKPGIRYHRSRKADDITKQANGLLQNAKFDILSYWSGPPSMAAFFSNLGYENYTSRNDTVKKITDEFQKPGVRMIGLHGLSGVGKTSLVKEVVKKALKDKMFEVVTMASVTKNPDVRKIQGQIVDMLGVVLEEESDIARAARIHEILNNENKSTLIILDDLWEEVNFNLLGIPCELKKDDSVTNVKGKSLYVDSSKNVTDGKSPGALDRVKSVKIRDILGGGLKNANEGKSPVDASDRVKTEKTVPQYKGCKILIISEIKQVLSSQMEGKEEYIFPVEVLKEKEGEMLFKKKAGIDGKNSEFDKLAAQIAKKCKGLPMTIVTTARTLKNKSLSVWEETNRNLESQNLTGAPEFSTMLSYKLLDEELKHTFLLCARMGHDALIMDLVKYCIGFGFLRGINTARQTRDKVHTLVGKLKESGLLSDSYSSDHFTMPDTVRTAALSIAYKENHLFTLTKGKVDDWPDNLESYAAISLHHCDFIEEFPERINYPRLRVLEIVNNNPRPKIPNNFFEGVKELRVLILTGIHLHLIDSSISCLNKLRMLCLEQCCMPDEELSIIGELKRLRILSFSGSDIKSLPDELNELKMLQIFDISNCSKLKKIPYGVISSLVSLEELTTRQSKVALLSDLKHLNQLTTLDIQIPNVSYLPRNLFFDKLYSYKIVIGDLSSFLETDFKMPEKYETLKFLAVQLKNGSDIHSLKGIKMLFEGVENLFLELNTVHEKHSSVQEAHNIVHDLFYRLNLKGFPYLKHLWIVNNSTIQSLIHPKDRQHPEKAFPKLESLCLYNLKMNELCSCKLSEPSFGKLKVIKINLCGELKNVFSISVVRLLKVLETIKVSECNSLKEIIDVGPQSNPEKTELLTLPELRYLKLQSLSEFIGFDAIPPIEGEERKLFNEKVGVSKLERLELSSIMIDVIWSVDHSSKRLSFESLTRLDVNRCWKLKYLVSSTMAKSLVNLQSLYISECDKMRSIFLPEQDTEKDIMGSIFPKLKNMKLGSMKSLSKIWNPKLPSDSFNKLDTLIIEECDKLENVMEGIFGSLCSLRVTNCRSMQTIFNIGVQVGDVANNLQDVHLETLPKLKLVWKINNEDRIEIPKFNILKKMWAQDCDSLEYIFPFSVARSLDNLESLVVCDCYGLSEIVAEREATNRGRARFNFPKLSTIKFSELPKLTSFYPTTYDLSCPLNELSIELCNNLEPFNKGTEYAQRNPVHVCFPEEVINHLKSMQIESWHAKSPSSYMGKRNHRRDNLEELSLSRLMDTEILYSFLQRNPNLKSLSLSNCFFNKIVPLKEDTEIENLGVVPNLKSLKLIDLPNLEEIGFEPDIILERIEFLILQNCPCMITIAPSSVSFTRLTNLEVVNCDGLQSLMSASTAKSLVQLNTMKVVKCESLMEIVRKDGEKSDKVVFQQLKVLELVSLKNLKSFCVSDCDFEFPSLEKFVVSACYNMEKFSETVSSSPILQNIHVVHGKENKRFCWEGGINATIQKIFGEKKFFEGMEEMSLSEHQELQETWQSGSSLQKQNSWFYSLKILKLENCVIQPCAIPSNILPYLRSLEELEVRGCNNVKVIFQMNAEGGTGTTFHLQKLTLEELPELKDVWERNGKGTQSFQNLKVVNVSECENLQTVFPLTLAKILKKLDELEILLCLGLHEIVRKEEDTEAVFVFPCLTTLHLGDLPELIYFYPQSFTLECPVLNKLLVWSCPELELFGSANRQSMFFDLKDICNLEVLLLDWKLDSVLRTNLGEPMDNLKYLHYILLFCYTDENKRFDFPIQILQKMPNLTKMSIYNCSCLELFQTRIPEIVETKVVLTDLKALELNNISKLQSIGSEDSPWLNVICDSEKLQELYIENCPDLKTLVHSTPSVSFTYVKEMFIESCQELKYLFTLSAVNKLENLEHIKVRDCKSMEAIVLKDEGDISEEIKLQQLKRIDLSILPSLECFYSGDDTMRLPSLKQVDIWMCPKMEGIQASNNTSDEFFLYNNLNSSVKKVFLQEEFFQAVDKDCFSDNLELQADPRCKIGLQNKWMANLETLKLQNCTLSYAIPSSILALLNNLKELEVRESDQVKAIFDMNDDTEITATESQLKILTLNGLPELTHVWEKDTHKILIFRNLQEVAVSDCAKLQSLFPASLAKSLKDLKKLKIDSCKDLQEIAFATEEFVFPKLEDMELNALPQNCTIHKCPNLKYLFTSSAAKKLMNLEQISVTECESVTEIVAKEGDATSEPIKFERLHTIYLLSLTSLEFFEAVDKGCFSNNLELQKDPHYKFGLKNKWLGDLVTLKLQNCTLPCALPSAIIGLLKSLKELEVRDSATVEVLFYMNDTEITEIASQLKILTLKGLSKMTHVWEKKKNGVLIFPNLQQVVVSNCENLQSLFPASLAKNLKILKALVIEYCAEFQEIIEKEEDTEAKFVLPCLEEFNLSSLPQLTCFYPQTFTLECPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASC9</accession>
    <name>V7ASC9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Mechanosensitive ion channel MscS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G102400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASC9"/>
    <dbReference type="SMR" id="V7ASC9"/>
    <dbReference type="STRING" id="3885.V7ASC9"/>
    <dbReference type="Gramene" id="ESW07111">
        <property type="protein sequence ID" value="ESW07111"/>
        <property type="gene ID" value="PHAVU_010G102400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRDM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIMEICL"/>
    <dbReference type="OrthoDB" id="567160at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034220">
        <property type="term" value="P:monoatomic ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_beta-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30566:SF5">
        <property type="entry name" value="MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30566">
        <property type="entry name" value="YNAI-RELATED MECHANOSENSITIVE ION CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="Mechanosensitive channel protein MscS (YggB), transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="Sm-like ribonucleoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0407">Ion channel</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="195"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="322"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="Mechanosensitive ion channel MscS" evidence="10">
        <location>
            <begin position="369"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="111"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW07111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="540" mass="58796" checksum="1ABFB92B03370425" modified="2014-02-19" version="1">MAAVRASSVRRIGSTIKVSFNMELVQRCHYHHSVCVNLARLPSDSPSHPYYKRELQSAKNQFSNLASESFGSSHQFGTRANLSFKPAFSSYCFRSALPFASASHVLNRRSYSSTVGGDKGSRDAGTEVAAGSGASDMNTTGDSVVGGDWAERIKDALKSVVESASYAGEKVKATSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATLIAWFLMPMILRKFHRYAMQGPVSLLPASISGDPVPYEKSFWGAMEDPMRYLVTFMAFSQIGVMVAPTTITAEYLAPVWRGAVIVSFVWFLHRWKTNVFARTLTSQSLLGLDREKVLALDKISSIGLFVIGIMAFAEACGVAVQSIVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIISKIPLQTEDLSKIPQISDDVKSMLRSNAKVFLGKDVPYCFLSRIESSFAELTLGYNLKHMRKDELYSAEQEILLLAVQIIKNHGVALGSTWQEMPSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASF1</accession>
    <name>V7ASF1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transmembrane 9 superfamily member</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G139200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endosome membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASF1"/>
    <dbReference type="Gramene" id="ESW07548">
        <property type="protein sequence ID" value="ESW07548"/>
        <property type="gene ID" value="PHAVU_010G139200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1278">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KVYYMFG"/>
    <dbReference type="OrthoDB" id="1666796at2759"/>
    <dbReference type="PhylomeDB" id="V7ASF1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010008">
        <property type="term" value="C:endosome membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072657">
        <property type="term" value="P:protein localization to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004240">
        <property type="entry name" value="EMP70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10766:SF111">
        <property type="entry name" value="TRANSMEMBRANE 9 SUPERFAMILY MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10766">
        <property type="entry name" value="TRANSMEMBRANE 9 SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02990">
        <property type="entry name" value="EMP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0967">Endosome</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0732">Signal</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007366110" description="Transmembrane 9 superfamily member" evidence="10">
        <location>
            <begin position="27"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="342"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="374"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="414"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="447"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="501"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="531"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="570"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="601"/>
            <end position="630"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW07548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="640" mass="73622" checksum="7ACFDC301478B8F7" modified="2014-02-19" version="1">MKKKMMASTAISVVFAALFLFSSVHSFYLPGVAPRDFQIGDPLSVKVNKLSSTKTQLPYDYYFLKYCEPSKILNNAENLGEVLRGDRIENSVYAFQMRKEQSCTVVCHKTLEAESAKSFKEKIDDEYRVNMILDNLPVAVRRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKDPQVTTCNKDTKNLMQGSTVPQEVDTGKDIVFTYDVSFKESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDVFRPPVNSNLLCVYVGTGVQIFAMTVVTMVFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFAVFFVLNALIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPTIEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEISKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASR4</accession>
    <name>V7ASR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G065500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the bZIP family. ABI5 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASR4"/>
    <dbReference type="SMR" id="V7ASR4"/>
    <dbReference type="STRING" id="3885.V7ASR4"/>
    <dbReference type="Gramene" id="ESW08682">
        <property type="protein sequence ID" value="ESW08682"/>
        <property type="gene ID" value="PHAVU_009G065500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08683">
        <property type="protein sequence ID" value="ESW08683"/>
        <property type="gene ID" value="PHAVU_009G065500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPP6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAGSIPN"/>
    <dbReference type="OrthoDB" id="1927218at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14707">
        <property type="entry name" value="bZIP_plant_BZIP46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000048">
        <property type="entry name" value="ABSCISIC ACID-INSENSITIVE 5-like protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043452">
        <property type="entry name" value="BZIP46-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952:SF463">
        <property type="entry name" value="ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952">
        <property type="entry name" value="CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0938">Abscisic acid signaling pathway</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="10">
        <location>
            <begin position="335"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="207"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="299"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="353"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="9">
        <location>
            <begin position="9"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00061369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW08682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="45028" checksum="55B7E28C636CA4A1" modified="2014-02-19" version="1">MNFKSFGNEAGGDGGGRPPGNFSLTRQSSVYSLTFDEFMNTMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVAADDGGAGISHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGEPNLAQTPRQPTLREMTLEEFLVRAGVVREDAKPNDGVFMDLARAGNNNGLGFEFQQMNKVAAATGLMGNRLNNDPLVGLQSSANLPLNVNGVRSSSQQPQMQSPQSQQQHHQQQIFPKQSAMSYAVAQMPQGMVRGGIVGLGGDQGLSVQGGGIGMVGLAPGSVHVATGSPAANQLSGDKMAKSNGDTSSVSPVPYVFNGGMRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT83</accession>
    <name>V7AT83_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G074000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT83"/>
    <dbReference type="Gramene" id="ESW08779">
        <property type="protein sequence ID" value="ESW08779"/>
        <property type="gene ID" value="PHAVU_009G074000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="745459at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007789">
        <property type="entry name" value="DUF688"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05097">
        <property type="entry name" value="DUF688"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="59" mass="6871" checksum="8BF6CD92628ED699" modified="2014-02-19" version="1" fragment="single">MDQPITHSPGRVPFSWEIKPGIPKVTVAESFQREHKFVHKLQLPPPSTSFQRNYDHAFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATK8</accession>
    <name>V7ATK8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G092000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant LTP family. PEARLI1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATK8"/>
    <dbReference type="SMR" id="V7ATK8"/>
    <dbReference type="STRING" id="3885.V7ATK8"/>
    <dbReference type="Gramene" id="ESW08997">
        <property type="protein sequence ID" value="ESW08997"/>
        <property type="gene ID" value="PHAVU_009G092000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S36E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCCALIN"/>
    <dbReference type="OrthoDB" id="696558at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="CDD" id="cd01958">
        <property type="entry name" value="HPS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.110.10:FF:000003">
        <property type="entry name" value="pEARLI1-like lipid transfer protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027923">
        <property type="entry name" value="Hydrophob_seed_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051636">
        <property type="entry name" value="Plant_LTP/defense-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31731">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14547">
        <property type="entry name" value="Hydrophob_seed"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755909" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="4">
        <location>
            <begin position="25"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="23"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="26"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW08997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="16562" checksum="7D54DA7E530DAA57" modified="2014-02-19" version="1">MASLKLLPTIFLLSLISYSSFTQANCPPPSSPKPKPSPKPTPPTIKPTPSPKPTPPIPKPSPKASCPPPPTPSPSPKGSCPKDILKLGVCANVLGLVHVIVGTPPSSDCCALIKDLADLEAALCLCTAIKANVLGINLNVPVALSAILSACQKTVPSGFKCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATT9</accession>
    <name>V7ATT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">SMP-LTD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G091700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the synaptotagmin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATT9"/>
    <dbReference type="STRING" id="3885.V7ATT9"/>
    <dbReference type="Gramene" id="ESW08994">
        <property type="protein sequence ID" value="ESW08994"/>
        <property type="gene ID" value="PHAVU_009G091700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1012">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLQAWPY"/>
    <dbReference type="OrthoDB" id="67700at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd21677">
        <property type="entry name" value="SMP_SYT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031468">
        <property type="entry name" value="SMP_LBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045050">
        <property type="entry name" value="Synaptotagmin_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039010">
        <property type="entry name" value="Synaptotagmin_SMP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774">
        <property type="entry name" value="EXTENDED SYNAPTOTAGMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10774:SF178">
        <property type="entry name" value="SYNAPTOTAGMIN-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17047">
        <property type="entry name" value="SMP_LBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51847">
        <property type="entry name" value="SMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="10" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="domain" description="SMP-LTD" evidence="13">
        <location>
            <begin position="60"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW08994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="28243" checksum="7A1A69CBE8F821EB" modified="2014-02-19" version="1">MGFFSGMILGIAIGILLIVAFARHQNVRSKRRSDLAKTIAEFARMTVEDSRKLLPPKFYPSWVLNWLNTQLKRIWPHVDEAVSDLIRTNVEPILEQYRPVVLSSLSFSTLTLGTVAPQFTGVTIVEEDSGPDGVTMDIEMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFTGVFRLIFKPLVNEFPGFGAVCFSLKEKKDLDFTLKVIGGDLSALPGISDAIEANVESFEPGPGPMSSLSGPGQCRAVWARVGVELSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU75</accession>
    <name>V7AU75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial</fullName>
            <ecNumber evidence="6">2.1.1.201</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Ubiquinone biosynthesis methyltransferase COQ5</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">COQ5</name>
        <name evidence="7" type="ORF">PHAVU_010G157500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Methyltransferase required for the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2-methoxy-6-(all-trans-polyprenyl)benzene-1,4-diol + S-adenosyl-L-methionine = a 5-methoxy-2-methyl-3-(all-trans-polyprenyl)benzene-1,4-diol + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28286"/>
            <dbReference type="Rhea" id="RHEA-COMP:10858"/>
            <dbReference type="Rhea" id="RHEA-COMP:10859"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:84166"/>
            <dbReference type="ChEBI" id="CHEBI:84167"/>
            <dbReference type="EC" id="2.1.1.201"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Component of a multi-subunit COQ enzyme complex, composed of at least COQ3, COQ4, COQ5, COQ6, COQ7 and COQ9. Interacts with PYURF; the interaction is direct, stabilizes COQ5 protein and associates PYURF with COQ enzyme complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Mitochondrion inner membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.201" evidence="6"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU75"/>
    <dbReference type="SMR" id="V7AU75"/>
    <dbReference type="STRING" id="3885.V7AU75"/>
    <dbReference type="Gramene" id="ESW07766">
        <property type="protein sequence ID" value="ESW07766"/>
        <property type="gene ID" value="PHAVU_010G157500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1540">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNDVMSM"/>
    <dbReference type="OrthoDB" id="6329284at2759"/>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031314">
        <property type="term" value="C:extrinsic component of mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008425">
        <property type="term" value="F:2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000064">
        <property type="entry name" value="2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01813">
        <property type="entry name" value="MenG_UbiE_methyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004033">
        <property type="entry name" value="UbiE/COQ5_MeTrFase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023576">
        <property type="entry name" value="UbiE/COQ5_MeTrFase_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01934">
        <property type="entry name" value="MenG_MenH_UbiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43591:SF24">
        <property type="entry name" value="2-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43591">
        <property type="entry name" value="METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01209">
        <property type="entry name" value="Ubie_methyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51608">
        <property type="entry name" value="SAM_MT_UBIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01183">
        <property type="entry name" value="UBIE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="162"/>
            <end position="163"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00046387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW07766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="290" mass="32164" checksum="9C705848EE4F57E7" modified="2014-02-19" version="1">MALGSVSRRLGTKLFPALSSTPRLLHSHATSFGFKHVNEEEKARMVGDVFTSVASSYDFMNDLMSVGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDSINKVKLRGLQGVSQDTLEAETQINVCDINPKMLNVGRQRASEKGFGEDGSLVWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKSGGRFLCLELSHVGIPIFKDLYDYYSFSVIPYMGELVAGDRESYQYLVESIRRFPSQEKFASMIADAGFQKVEYENLVGGVVSIHSGLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUF0</accession>
    <name>V7AUF0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G028400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUF0"/>
    <dbReference type="SMR" id="V7AUF0"/>
    <dbReference type="STRING" id="3885.V7AUF0"/>
    <dbReference type="Gramene" id="ESW08213">
        <property type="protein sequence ID" value="ESW08213"/>
        <property type="gene ID" value="PHAVU_009G028400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0236">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RLRLGCW"/>
    <dbReference type="OrthoDB" id="288203at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07042">
        <property type="entry name" value="STAS_SulP_like_sulfate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.750.24:FF:000002">
        <property type="entry name" value="Sulfate transporter 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="entry name" value="STAS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018045">
        <property type="entry name" value="S04_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00815">
        <property type="entry name" value="sulP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="SULFATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SpoIIaa-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="254"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="282"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="374"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="400"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="431"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="472"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="8">
        <location>
            <begin position="541"/>
            <end position="646"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="654" mass="71556" checksum="5ADF79BEB5F62832" modified="2014-02-19" version="1">MSSTPTMRFSGQENFHPEDTGQIERSLWVLEPPNPPPLWNKLFSPLKKSMFFFSSKKKTYLGRAVSFLESLFPILCWFKNYKASKFKNDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRNVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGVTHFTNKTDVISVLVSVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVLLSTSIVYLSKADKSGVNIIKHVKGGLNPSSVHKLQFHGPHVGQTAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMAVTVFLCLELFTRLLYYTPMAILASIILSALPGLIDINEAYYIWKVDKFDFLACIGAFFGVLFVSVETGLLVAVSISFAKILIQSIRPGIEVLGQVPRTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANFVRERILKWVIMEEENELAKGKVYAVILDMGNLMNVDTSGILVLEELHKRLLSRGVRLAMVNPRWVVIWKLKVAQFVDKIGKKWVFLTVGEAVDACLSSKLPEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUF2</accession>
    <name>V7AUF2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Stress-response A/B barrel domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G108100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUF2"/>
    <dbReference type="SMR" id="V7AUF2"/>
    <dbReference type="STRING" id="3885.V7AUF2"/>
    <dbReference type="Gramene" id="ESW09194">
        <property type="protein sequence ID" value="ESW09194"/>
        <property type="gene ID" value="PHAVU_009G108100g"/>
    </dbReference>
    <dbReference type="OMA" id="PAMNSFH"/>
    <dbReference type="OrthoDB" id="1601230at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009865">
        <property type="term" value="P:pollen tube adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013097">
        <property type="entry name" value="Dabb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044662">
        <property type="entry name" value="HS1/DABB1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33178">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33178:SF10">
        <property type="entry name" value="STRESS-RESPONSE A_B BARREL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07876">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00886">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="Dimeric alpha+beta barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51502">
        <property type="entry name" value="S_R_A_B_BARREL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Stress-response A/B barrel" evidence="2">
        <location>
            <begin position="8"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="114" mass="13141" checksum="BE90D7EB92DC7F90" modified="2014-02-19" version="1">MAEAKREVRLIVLAKFKEEATPEKIEEAITEYAKLVDVIPAMNSFHWGKDDSAKVNLHLHEGYTHIFESTFDNIEGVQEYEDHPDHAVFEKLLLSCTEKLLVITYQPTIVNLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWV6</accession>
    <name>V7AWV6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcriptional coactivator Hfi1/Transcriptional adapter 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G101100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWV6"/>
    <dbReference type="SMR" id="V7AWV6"/>
    <dbReference type="STRING" id="3885.V7AWV6"/>
    <dbReference type="Gramene" id="ESW09113">
        <property type="protein sequence ID" value="ESW09113"/>
        <property type="gene ID" value="PHAVU_009G101100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTUY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IINGMWP"/>
    <dbReference type="OrthoDB" id="10264870at2759"/>
    <dbReference type="PhylomeDB" id="V7AWV6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000124">
        <property type="term" value="C:SAGA complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22933">
        <property type="entry name" value="HFD_HFI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024738">
        <property type="entry name" value="Hfi1/Tada1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21277">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21277:SF5">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12767">
        <property type="entry name" value="SAGA-Tad1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="139"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="198"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="200"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW09113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="419" mass="46800" checksum="D77C099533666605" modified="2014-02-19" version="1">MQPQQSSRIDLGELKAQIVKKLGADKSKRYFYYLNRFLSQKLSKTDFDKFCFRVLGRENLPLHNHFIKSILKNACQAKIPPPIHPSGPQKFGEHASDIYPGREDGHEQSVGSFHNQNQKATVWSNGILPVSPKVRPGIRERKLRDRPSPLGPNGKVDSVSHQSMGTEDCGSKVDLENGILTPCDYQRPMQHLQAVAELPEYERGDADRRPVEKPRIHGKGPAEMSIVEDGEEVDQLNRLVLSRSPLIAPLGIPYCSASVGGARKTLPVSSAGYFDSCCDSGRLSDTETLRRRMDQIAAVQGLGAISMECANMLNNMLDVYLKRLIRSCVDLVRARPTNEPRKSPAPKQQLQGKIISGMWPNNHLHVQCDGGSGEAVSEHRPPCLVSLHDFKVAMELNPQQLGEDWPLWLEKISMQSFEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX31</accession>
    <name>V7AX31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BURP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G105300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX31"/>
    <dbReference type="SMR" id="V7AX31"/>
    <dbReference type="STRING" id="3885.V7AX31"/>
    <dbReference type="Gramene" id="ESW09158">
        <property type="protein sequence ID" value="ESW09158"/>
        <property type="gene ID" value="PHAVU_009G105300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQHP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHFIPED"/>
    <dbReference type="OrthoDB" id="654134at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044816">
        <property type="entry name" value="BURP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004873">
        <property type="entry name" value="BURP_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31236:SF2">
        <property type="entry name" value="BURP DOMAIN PROTEIN RD22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31236">
        <property type="entry name" value="BURP DOMAIN PROTEIN USPL1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03181">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01045">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51277">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753690" description="BURP domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="BURP" evidence="2">
        <location>
            <begin position="128"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="338" mass="36710" checksum="3D4CD5323A4750E0" modified="2014-02-19" version="1">MENLLLPIFALLNLAVVATHGAALPPQLYWKSLLPTTPIPNAITRILRPDWVEEKGTAVNVGKGGVNVHAGKGGGTNVNVGGKGGGVSVNAGHKKKPVHVSVGPKSPFDYRYAATATQLHDDTKVALFFLEKDLHYGTKLDAHFTTSSNQATFLPRQVADSIPFSSDKVDDVFTKFSIKPGSEEAHIIENTLSECEETGIKGEEKYCATSLESMVDFSTSKLGKNVEVLSTEVDKEMGLQKYTVAPGVKKISGDTAVVCHKQNYPYAVFYCHKTESTRTYSVPLVGANGIRVKSVAVCHTDTSQWNPKHLAFQVLNVKPGTVPICHFLPQDHVVWVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0U3</accession>
    <name>V7B0U3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="20">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_009G215600g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 17">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">May function both as a monomer and a homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Lumenal side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the EROs family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0U3"/>
    <dbReference type="SMR" id="V7B0U3"/>
    <dbReference type="STRING" id="3885.V7B0U3"/>
    <dbReference type="Gramene" id="ESW10508">
        <property type="protein sequence ID" value="ESW10508"/>
        <property type="gene ID" value="PHAVU_009G215600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2608">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSSIFDC"/>
    <dbReference type="OrthoDB" id="269384at2759"/>
    <dbReference type="PhylomeDB" id="V7B0U3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016972">
        <property type="term" value="F:thiol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034975">
        <property type="term" value="P:protein folding in endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007266">
        <property type="entry name" value="Ero1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037192">
        <property type="entry name" value="ERO1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12613:SF0">
        <property type="entry name" value="ERO1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12613">
        <property type="entry name" value="ERO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04137">
        <property type="entry name" value="ERO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017205">
        <property type="entry name" value="ERO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110019">
        <property type="entry name" value="ERO1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 18" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9 17" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="19" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="16">
        <location>
            <position position="369"/>
        </location>
    </feature>
    <feature type="active site" evidence="16">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="18">
        <location>
            <begin position="113"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="18">
        <location>
            <begin position="369"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR017205-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR017205-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR017205-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW10508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="459" mass="52150" checksum="4B65436EC8B6F2DB" modified="2014-02-19" version="1">MVKTEAKKKGSGAPWLWVLMALVAVFVAMAVSSKTSPTISLSGAIDRACQCARGTPKYSGMVEDCCCDYETVDHLNEEVLNPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPESEFPESFKKPHRFSMNDLVCQEGKPQAAVDRTLDSKVFRGWSETDNPWTIDDETDNDEMTYVNLQLNPERYTGYTGSSARRIWDAVYSENCPKYPSQELCQEKKILYKLISGLHSSISIHIAAEYLLDETTNLWGQNLTLIYDRVLKYPDRVSNLYFTFLFVLRAVTKAANYLEQAEYDTGNHNEDLKTHSLIKQLLSDPKLQTACPIPFDEANLWKGQSGPELKQKIQQQFRNISALMDCIGCEKCRLWGKLQVLGLGTALKILFSVDGQENSLQLQRNEVIALMNLLNRLSESVKFVHEVGPAADSVMEGHVSAHTTFINAWKKIWSFVSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1G4</accession>
    <name>V7B1G4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G230600g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the DEAD box helicase family. eIF4A subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G4"/>
    <dbReference type="SMR" id="V7B1G4"/>
    <dbReference type="STRING" id="3885.V7B1G4"/>
    <dbReference type="Gramene" id="ESW10703">
        <property type="protein sequence ID" value="ESW10703"/>
        <property type="gene ID" value="PHAVU_009G230600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0327">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DYNVTEC"/>
    <dbReference type="OrthoDB" id="10265785at2759"/>
    <dbReference type="PhylomeDB" id="V7B1G4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17939">
        <property type="entry name" value="DEADc_EIF4A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000089">
        <property type="entry name" value="Eukaryotic initiation factor 4A-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000031">
        <property type="entry name" value="Eukaryotic initiation factor 4A-III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 12" id="KW-0347">Helicase</keyword>
    <keyword evidence="4 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="15">
        <location>
            <begin position="40"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="13">
        <location>
            <begin position="71"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="14">
        <location>
            <begin position="252"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="11">
        <location>
            <begin position="40"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW10703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="46889" checksum="7B145962BACA8151" modified="2014-02-19" version="1">MAGLAPEGSQFDGRHYDSKMNELLTTDAQDFFTSYDEVFESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDDKMLFDIQKFYNVVVEELPSNVAELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1G5</accession>
    <name>V7B1G5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G055700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G5"/>
    <dbReference type="SMR" id="V7B1G5"/>
    <dbReference type="STRING" id="3885.V7B1G5"/>
    <dbReference type="Gramene" id="ESW11737">
        <property type="protein sequence ID" value="ESW11737"/>
        <property type="gene ID" value="PHAVU_008G055700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3085">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIDDRMT"/>
    <dbReference type="OrthoDB" id="2012566at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43611">
        <property type="entry name" value="ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43611:SF3">
        <property type="entry name" value="FLAVIN MONONUCLEOTIDE HYDROLASE 1, CHLOROPLATIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00702">
        <property type="entry name" value="Hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01129">
        <property type="entry name" value="C1.5:_HAD__Beta-PGM__Phosphata"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW11737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="252" mass="29168" checksum="FEBA08E404196508" modified="2014-02-19" version="1">MVLMGGVGVPSFSFCCLFQTRPTRPLCLKFRLKPSSSHSITTMALTNNTNERKLPVLLFDIMDTLVRDPFYQDVPAFFGMPLKELIDIKHPTAWIEFEKGLIDEIELARKFFKDGRDFDLEGLKTCMRSGYSYIEGIEQLLLSLKKNNYEMHAFTNYPIWYQLIEDKLKLSKYLSWTFCSCTFGKRKPDTEFYKEVVRHLNVDPTNCIFVDDRQTNVDAAIEVGIRGLHFKNVKLLSENLSLMGIDISTDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1N8</accession>
    <name>V7B1N8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Translation factor GUF1 homolog, mitochondrial</fullName>
            <ecNumber evidence="9">3.6.5.n1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Elongation factor 4 homolog</fullName>
            <shortName evidence="9">EF-4</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">GTPase GUF1 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Ribosomal back-translocase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G061200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="3.6.5.n1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Mitochondrion inner membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
            <orientation evidence="9">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the GTP-binding elongation factor family. LepA subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.n1" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1N8"/>
    <dbReference type="SMR" id="V7B1N8"/>
    <dbReference type="STRING" id="3885.V7B1N8"/>
    <dbReference type="Gramene" id="ESW11812">
        <property type="protein sequence ID" value="ESW11812"/>
        <property type="gene ID" value="PHAVU_008G061200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0462">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1074at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097177">
        <property type="term" value="F:mitochondrial ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045727">
        <property type="term" value="P:positive regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03699">
        <property type="entry name" value="EF4_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16260">
        <property type="entry name" value="EF4_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01890">
        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03709">
        <property type="entry name" value="lepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000078">
        <property type="entry name" value="Elongation factor 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000015">
        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.240:FF:000007">
        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.2570:FF:000001">
        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.870:FF:000004">
        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2570">
        <property type="entry name" value="Elongation factor 4, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.870">
        <property type="entry name" value="Elongation Factor G (Translational Gtpase), domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00071">
        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006297">
        <property type="entry name" value="EF-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038363">
        <property type="entry name" value="LepA_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013842">
        <property type="entry name" value="LepA_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035654">
        <property type="entry name" value="LepA_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01393">
        <property type="entry name" value="lepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512:SF7">
        <property type="entry name" value="TRANSLATION FACTOR GUF1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512">
        <property type="entry name" value="TRANSLATION FACTOR GUF1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06421">
        <property type="entry name" value="LepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="EF-G C-terminal domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="7 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4 9" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="3 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0934">Plastid</keyword>
    <keyword evidence="9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="10">
        <location>
            <begin position="71"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="80"/>
            <end position="87"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="156"/>
            <end position="160"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="210"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW11812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="676" mass="75364" checksum="9999131AECF36530" modified="2014-02-19" version="1">MGYLSKASKTLRQSNYLSLLCSFNFNFNPLTNRITHERFSMRRELFCSQSRQYSTTTREKSNIDLSQYPPDLIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSVNGDDCSDGKESPNFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPNDALLTSAKTGVGLEQILPAVIERIPAPPGRSESPLRMLLLDSYYDEYRGVICHVAVVDGVLSKGDKISSSATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYRTRTVVKPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSIAKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHIISTVPTVPYIFEFSDGSKLEVQNPASLPSNPKQKVTACWEPTVMATIIIPSEYVGPVITLVSERRGQQLEYSFIDSQRVFMKYRLPLREIVIDFYNELKSITSGYASFDYEDSDYQQADLVKLDILLNAQPVDAMATIVHNTKAYRVGRELTEKLKTVIDRQMFEITIQAAIGSKIIARETISAMRKNVLAKCYGGDITRKRKLLEKQKEGKKRMKRIGSVDIPQEAFHQLLKVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1Z4</accession>
    <name>V7B1Z4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">mTERF protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G246500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the mTERF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1Z4"/>
    <dbReference type="STRING" id="3885.V7B1Z4"/>
    <dbReference type="Gramene" id="ESW10888">
        <property type="protein sequence ID" value="ESW10888"/>
        <property type="gene ID" value="PHAVU_009G246500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEDKIMF"/>
    <dbReference type="OrthoDB" id="637682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.70.10:FF:000001">
        <property type="entry name" value="Mitochondrial transcription termination factor-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.70.10">
        <property type="entry name" value="Transcription termination factor 3, mitochondrial"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003690">
        <property type="entry name" value="MTERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038538">
        <property type="entry name" value="MTERF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068">
        <property type="entry name" value="CGI-12 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068:SF91">
        <property type="entry name" value="TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02536">
        <property type="entry name" value="mTERF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00733">
        <property type="entry name" value="Mterf"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="393" mass="44863" checksum="DFF3063E56F77ED2" modified="2014-02-19" version="1">MFNKLLCLKCVTSTATSCYPFIQNYPLPFSLRFFTTTSKSRSFAVSYLTDNFGFSPDSASKISNSYNICFQTPEKPESVIMFFRNRGFSNSQINQMVRKVPWLLSCDPCKRVLPKFDFLLSKGVSSSEIVDQVSKNPGILGPSLKNHIVPTYELIYKFLQSDAKTVGCIFGNSFFSYGDRLARNIRLLQENGVRESNIARLLGNRSKEVFISNDMVKLVKEVKDLGFDPSKTTFAVAMMALKRTSPSMWKEKVDTFKKWGWSDEAFSEAFRRHPHCMLTSIEKINVVMNLWVNQLGWDALDLVRGPKIFGLSMEKTLVPRARVVQHLLAKGLRNNSTSFLTPFWVSEKVFLEKFVTCFKEESRQLLKLYQEKVSVRGKEEVGAAWCSSQMVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3G8</accession>
    <name>V7B3G8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Transmembrane protein 245</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G085300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3G8"/>
    <dbReference type="Gramene" id="ESW12110">
        <property type="protein sequence ID" value="ESW12110"/>
        <property type="gene ID" value="PHAVU_008G085300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12111">
        <property type="protein sequence ID" value="ESW12111"/>
        <property type="gene ID" value="PHAVU_008G085300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2365">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WLVSFWI"/>
    <dbReference type="OrthoDB" id="5970161at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716:SF72">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="509"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="539"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="573"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="605"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="23"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="23"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="660" mass="72802" checksum="E14475A7036FC6C9" modified="2014-02-19" version="1">MELVPYSEPSSTSPAWQDMFRSASSLHPSSAPSSHAPPSKPHAPSPSSQAAFNPPSDGDPDGKNTFSDDAQVRLALYIAMAHAGLAFAIFILYTFSKLLEQYLRPLQWAVLCSIPLRGIQQTLVAFWSEPLLLGLTETVLAVPVAVFRVFVGTLVEIREASFRVILRKPKSQQNHRSRNRSGFSKLLRLLVSFGIFIIAYELLGGFGALSLLILGFLFTSNSLDSTMYTLSSFRSHSFRRSAISAFFTRGILRRLKIIVAIGLIVCMIVGFLSGVIFFSYKIGVEGKDAVISLKLHVEESNYAERIGVKKWMDDNDVAGMVDSYSTKIYETVSDQIDGLAVQYNMTEFVSGIKHFVISNPVNSSVPSRALTPSPYAEKFLSLKTRVRNREWGQIYAEVHSILRELVITREDLVEKAKGFAFKGIDVSQQIFASSRTVLGSSSKFMFSIANSIVSGAAEVINFVSQSMVFIWVLYYLITSESGGVTEQVMYMLPISNAARVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLNKVHFLYMSTVLAFISPLFPIFPSWLATIPAALQLVLEGRYIMAIVLSIIHLFLMDYGASEILLDVPGNSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVMIAVKDLYAEFVLQEPKDKAKQKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4D9</accession>
    <name>V7B4D9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF7866 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G054900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4D9"/>
    <dbReference type="STRING" id="3885.V7B4D9"/>
    <dbReference type="Gramene" id="ESW11728">
        <property type="protein sequence ID" value="ESW11728"/>
        <property type="gene ID" value="PHAVU_008G054900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5VF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEMVPLM"/>
    <dbReference type="OrthoDB" id="1871192at2759"/>
    <dbReference type="PhylomeDB" id="V7B4D9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057188">
        <property type="entry name" value="DUF7866"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33786">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33786:SF2">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25268">
        <property type="entry name" value="DUF7866"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754098" description="DUF7866 domain-containing protein" evidence="1">
        <location>
            <begin position="19"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7866" evidence="2">
        <location>
            <begin position="57"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="11756" checksum="3F0E489E9F62B097" modified="2014-02-19" version="1">MMPAHGLIISLIFVSILANEASLVQEANGSFPMVPLVEAGKIEMMMMMNESRRKLGSFQICALCTCCGGAKGVCLPSPCCYAINCNIPHRPFGFCSFTPKTCNCFGCHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4V4</accession>
    <name>V7B4V4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="29" type="ORF">PHAVU_008G146000g</name>
    </gene>
    <organism evidence="29 30">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="30" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="30">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="25">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="24 31">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Single-pass type I membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="23">Belongs to the polygalacturonase-inhibiting protein family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4V4"/>
    <dbReference type="SMR" id="V7B4V4"/>
    <dbReference type="STRING" id="3885.V7B4V4"/>
    <dbReference type="Gramene" id="ESW12834">
        <property type="protein sequence ID" value="ESW12834"/>
        <property type="gene ID" value="PHAVU_008G146000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQYD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LEMMICV"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="PhylomeDB" id="V7B4V4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000309">
        <property type="entry name" value="Leucine-rich repeat receptor protein kinase MSP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000445">
        <property type="entry name" value="MDIS1-interacting receptor like kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000719">
        <property type="entry name" value="MDIS1-interacting receptor like kinase 2 isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000400">
        <property type="entry name" value="Nuclear pore complex protein NUP107"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:002476">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051420">
        <property type="entry name" value="Ser_Thr_Kinases_DiverseReg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005">
        <property type="entry name" value="LEUCINE RICH REPEAT KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48005:SF70">
        <property type="entry name" value="MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00365">
        <property type="entry name" value="LRR_SD22"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="17" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0134">Cell wall</keyword>
    <keyword evidence="20" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="22" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="15" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="19 26" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-0611">Plant defense</keyword>
    <keyword evidence="21" id="KW-0675">Receptor</keyword>
    <keyword evidence="30" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="12 27" id="KW-0732">Signal</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="11 26" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="18 26" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="27">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754123" description="non-specific serine/threonine protein kinase" evidence="27">
        <location>
            <begin position="33"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="26">
        <location>
            <begin position="597"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="28">
        <location>
            <begin position="663"/>
            <end position="949"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00038043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="26">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="27">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="28">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="29">
        <source>
            <dbReference type="EMBL" id="ESW12834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="30">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="951" mass="104509" checksum="A6B4460AC4AB25AC" modified="2014-02-19" version="1">MVFLFPMLLSMKLQPLWLLLVMFFCAFPHYHAANSSDIDSEANALLKWKASLDNHSQDSLSSWNGNNPCNWLGIKCDDSLSVSDINLIRLGLKGTLQTFNFSLLPNILNLNISYNSLSGTIPPQIQHLSNLSTLDLSTNKLSGAIPNTICNLSKLKYLNLSVNALSGPIPNEVGNLHSLLTFDIFANNLSGPIPPSLGTLPLLESIHLFENKLNGSIPSSIGNLTKLTMLSLSSNQLTGSIPPHIGNLTKANVICFIGNELSGEIPIEMEKLTGLECLQLADNNFIGQIPQNICLGGNMKYFTAGNNNFTGPIPETLRKCYSLKRLRLQQNHLTGDITNFFDVLPNLNYIDLSENNFHGNLSPSWGKFRSLTSLMISNNNLSGVIPPELGGATKLQVLDLSSNHLTGNIPEDLCNLSLLFDLSISNNNLSGNVPMKIESLQELKILDLGSNDFRGLIQKQLGNLHNLLRMSLRQNKFEGNIPSELGNLKYLSSLDLSENLLSGTLPPTLGGIKGLEALNLSHNSLSGDLSSLDDMISLTSFDISYNQFEGPLPNNPVFENATIASLRDNKGLCGNVTGLVPCPTGSVKAHNNTTRTVLIAVLPLTVAILMLGLFLFGFSYHFFRTPNREKDQTTSLRCPSIFPIWSSGGKITFEDIIEATEYFDDKYLIGVGGQGCVYKAILPTGEVVAVKKLHSVSNGEILNQKAFTSEIQALTEIRHRNILKFHGFCSHSQYSFLVFEFLERGDVKKILKDDEQATAFDWNKRVDVVKDVAKALCYMHHDCLPPIVHRDISSKNVLLDSEYVAHVSDFGTAKLLDHNSSNWTSFAGTFGYAAPELAYTMEVNEKCDVYSFGVFALEILFGRHPGDVTSLLQSSLSIGMSSTLDHMALMDKLDERLPDPTSSTMKEVLLIVKVAIACLTESPRSRPTMKLVTDELAMSRSSSMSHTDLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4Z5</accession>
    <name>V7B4Z5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G072200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11943">
        <property type="protein sequence ID" value="ESW11943"/>
        <property type="gene ID" value="PHAVU_008G072200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNCENME"/>
    <dbReference type="OrthoDB" id="1747797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057135">
        <property type="entry name" value="At4g27190-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF196">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23247">
        <property type="entry name" value="LRR_RPS2"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="7">
        <location>
            <begin position="173"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="302"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="30"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="302"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW11943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="2541" mass="292916" checksum="11CF60C85882E3B4" modified="2014-02-19" version="1">METIVSTTTESALQIGGGLVKRHLGYFYNYNEKLQELKDYIVMLDNARKRVQNEVKKAEMNAEEIENDVHYWLKHVDEKINKYVSFIDDERHSKISSIGFSPNNLKLRYWLGRKATEILEEIKADEHLKKKFDGVSYRVFPTVNSALANTGYESFGSRNKTFEMIMKTLEDSKTNIVGVYGVGGVGKTTLVKAIAKKVQEKKLFNMVVMANITRNPDIKNIQGQIAEMLGMRMEEESETLRADLIRKRLKNEKENTLIILDDLWDGLDLNKLGIPSSYDVDDNQWDVKDISDFGYNKREKEDMSIDSSKMKKDKLSANSNKVKKEKAPMDHKRCKILLTSRSKEVICNQMDVQDQSTFLVGVIDEKEAETLLKKVAGIHSTNSMIDKVTEIAKMCPGLPISLVSIGRALKNKSASVWEDVYRQIQRQSFTEEWESIEFSVKLSYDHLINDELKCLFLQCARMGNDALIMDLVKFCIGSGLLQGVFTIREARHRVNALIEVLKDSSLLVESYSTDRFNMHDIVRNVALSISSNEKHVLFMKNGILDEWPQKDELKKYTAIFLQYFDFNDELLKSIHCPTLQVLHIDSKYDSMKIPDNFFKDMIELKVLILTGVNLSLLPSSLKCLTNLRMLSLERCSLEKKLSYIGALKKLRILTLSGSNIESLPLEFGQLDKLQLFDLSNCPKLRIIRPNIISRMKVLEEFYMRDYSIPRKPATNIQSLNATLSELMQLNWLRTLDIHIPRLDSYKIVIGELNMLSQLEFKVLDKYEAGKFLALNLRGHCINIHSEKWIKMLFKNVEHLLLGDLNDVDDVLYEFNVEGFANLKHMYVVNSFGIQFIIKSVERFHPLLAFPKLESMCLYKLDNLEKICDNKLTKDSFRRLKIIKIKTCDQFKSIFSFSMIECFGMLERIEACDCDSLKEIVSVEGESCNVNAIEADKVEFPQLRFLTLQSLPSFCCLYTNDKTPFISQSFEDQVPNKEFKEITTVSGQYNNGFLSLFNEKVSIPKLEWLELSSINIRQIWNDQCFHSFQNLLKLNVSDCENLKYLLSFPTAGNLVNLQSLFVSGCELMEDIFSTTDATQNIDIFPKLKEMEINCMNKLNTIWQSHMGFYSFHCLDSLIVRECNKLVTIFPNYIGKRFQSLKSLVITDCTSVETIFDFRNIPETCGRSELNFHDVLLKRLPKLVHIWKFDTDEVLNFNNLQSIVVYECKMLQYLFPLSVAKGLEKLETLDVSNCWEMKEIVACNNRSNEVDVTFRFPQLNTLSLQHLFELRSFYRGTHSLKWPLLRKLSLLVCSNLEETTNSQMNRILLATEKVIHNLEYMSISWKEAEWLQLYIVSVHRMHKLKSLVLSGLKNTEIVFWLLNRLPKLESLTLMNCLVKEFWASTNPVTDAKIGVVVQLKELMFNNVWFLQNIGFKHCPLLQRVERLVVSGCLKLKSLMPPMASFSSLTYLEVTDCLGLLNLMTSSTAKSLVQLVTLKVSLCESMKRIVKQDEETQVIEFRQLKVIELVSLESLTCFCSSKKCVLKIPSLENLLVTDCPEMKTFCKKQSAPSLRKIHVAAGENDTWYWEGDLNATLQKISTGQVSYEDSKELTLTEDSHPNIWSKKAVFPYNYFENLKKLVVEDIKKESVIPSKILACLKSLEELEVYGCKKVKAVFDIHDIEMNKTNGLVSRLKKLDLDELPNLTRVWNKNPQGIVSFPYLQEVSVSDCSRITTLFPSPFVRNLVKLQKLEILRCKSLVEILEKEDAKELGTAEMFHFPYLSFFILYKLPKLSCFYPGKHHLECPILETLDVSYCPMLKLFTSEFSDKEAVRESEVSAPNTISQLQQPLFSVEKVVPKLKNLTLNEENIILLRDGHGPQHLLCNLNKLDLSFEHDDRKEKTLPFDFLLMVPSLQNLEVRQCFGLKEIFPSQKLEVHDGKLPELKRLTLVKLRKLESIGLEHPWVKPFSATLKMLTLQLCNKIHYLFTFSTAESLVQLEFLCVEECGLIREIVKKEDEDASAEIKFGRLTTLELDSLPKLASFYSGNATLQFSRLKTITVAECPNMITFSEGSINAPMFQGIETSTDDYDLTFLNNLNSTVQWLFVQKEDPKMEEFWHGKAALQDNYFQSVKTLVVENIKEKFKISSRILRVLRSLEELQVYSCKAVQVIFDIDETMEKNGIVSPLKKLTLDKLPYLKRVWSNDPQGMINFPNLQEVSVRDCRDLETLFHSSLAKNLIKLGTLVIRNCAELVSIVRKEEEATARFEFPCLSSLVLYKLPQLSCFYPGKHHLKCPILESLNVSYCPKLKLFTFEFLDSDTEEITKSKLQQPLFSVKKVVPKLKKLTLNEENIKLLSYKDLPEDLLGKLNYLELCFEDDDSEDDDSEEDTLPFDFLHKVHNLEHLVVRRLGIKEIFQEHQVKERIPTTLKILTLANLEKLKSLGLEHLPYSEKLEILNLKRCPRLQNLVPNSVSFISLKQLCVKLCKKMKYLFKFSTAKSLVQLESLIVMNCKSLKEIAKKEDNDDEIIFGQLTTLRLDSLPKLEGFYFGKSYFAVLVSERSEDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B561</accession>
    <name>V7B561_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G133700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast thylakoid membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PsaE family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B561"/>
    <dbReference type="SMR" id="V7B561"/>
    <dbReference type="STRING" id="3885.V7B561"/>
    <dbReference type="Gramene" id="ESW12685">
        <property type="protein sequence ID" value="ESW12685"/>
        <property type="gene ID" value="PHAVU_008G133700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1U2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFRIRTN"/>
    <dbReference type="OrthoDB" id="2161449at2759"/>
    <dbReference type="PhylomeDB" id="V7B561"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009538">
        <property type="term" value="C:photosystem I reaction center"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019904">
        <property type="term" value="F:protein domain specific binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.50:FF:000001">
        <property type="entry name" value="Photosystem I reaction center subunit IV, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008990">
        <property type="entry name" value="Elect_transpt_acc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003375">
        <property type="entry name" value="PSI_PsaE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34549">
        <property type="entry name" value="PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34549:SF10">
        <property type="entry name" value="PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02427">
        <property type="entry name" value="PSI_PsaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50090">
        <property type="entry name" value="Electron transport accessory proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="7" id="KW-0603">Photosystem I</keyword>
    <keyword evidence="6" id="KW-0934">Plastid</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="42"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="45"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW12685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="130" mass="13805" checksum="A762F90D297FC709" modified="2014-02-19" version="1">MASAASGFVLSLNFAAASTNSSPSRIIFPSKNNASGLVVRASDEAAPAPATATPPLEAEAKPKPPPIGPKRGAKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIVEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6M3</accession>
    <name>V7B6M3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">beta-ketoacyl-[acyl-carrier-protein] synthase III</fullName>
            <ecNumber evidence="3">2.3.1.180</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G086600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>malonyl-[ACP] + acetyl-CoA + H(+) = 3-oxobutanoyl-[ACP] + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9625"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78450"/>
            <dbReference type="EC" id="2.3.1.180"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thiolase-like superfamily. FabH family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.180" evidence="3"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6M3"/>
    <dbReference type="SMR" id="V7B6M3"/>
    <dbReference type="STRING" id="3885.V7B6M3"/>
    <dbReference type="Gramene" id="ESW12126">
        <property type="protein sequence ID" value="ESW12126"/>
        <property type="gene ID" value="PHAVU_008G086600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUK2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGSEGDK"/>
    <dbReference type="OrthoDB" id="428487at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033818">
        <property type="term" value="F:beta-ketoacyl-acyl-carrier-protein synthase III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00830">
        <property type="entry name" value="KAS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000004">
        <property type="entry name" value="3-oxoacyl-[acyl-carrier-protein] synthase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01815">
        <property type="entry name" value="FabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013751">
        <property type="entry name" value="ACP_syn_III_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004655">
        <property type="entry name" value="FabH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00747">
        <property type="entry name" value="fabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006829">
        <property type="entry name" value="PRK09352.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43091">
        <property type="entry name" value="3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43091:SF1">
        <property type="entry name" value="BETA-KETOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08545">
        <property type="entry name" value="ACP_syn_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III N-terminal" evidence="12">
        <location>
            <begin position="162"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="11">
        <location>
            <begin position="302"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00052419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00057449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW12126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="392" mass="41402" checksum="CE653477D2240BB3" modified="2014-02-19" version="1">MANASGFFTPSVPHFRVKVRPFATAIGFSAKVVCFGNIEGADKHATSKSSIPRLVSKGCKLVGCGSAVPALEISNDELSQIVDTSDEWISVRTGIRRRRVLSGKDNLTTLAVEAARKALEMAKVDSDDLDLILLCTSTPEDLFGSAPQISKQLGCKRNPLSYDITAACSGFVLGLISAACHIRGGGFNNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQGCNSEEDGLLGFDLHSDGNGQRHLNAGIRENESGNALESNGSVFGFPPKPSSYSCIQMNGKEVFRFAVRCVPQSIESALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYGNTSAASIPLALDEAVRSGKVKAGQTIATAGFGAGLTWGSAIVRWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B701</accession>
    <name>V7B701_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G096200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B701"/>
    <dbReference type="STRING" id="3885.V7B701"/>
    <dbReference type="Gramene" id="ESW12241">
        <property type="protein sequence ID" value="ESW12241"/>
        <property type="gene ID" value="PHAVU_008G096200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1799">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVKIICA"/>
    <dbReference type="OrthoDB" id="4327079at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="83" mass="9713" checksum="FDBB1A30281693CE" modified="2014-02-19" version="1">MMHGYGLVNKLCLELKDFMKKHNFTSIEDFRGASLEYFTTHTELVRRQQEAIQKRKAIKKGLQSDKDWRGDGFVKESESMVSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAP2</accession>
    <name>V7BAP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Aluminum-activated malate transporter 4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G025900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the aromatic acid exporter (TC 2.A.85) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAP2"/>
    <dbReference type="STRING" id="3885.V7BAP2"/>
    <dbReference type="Gramene" id="ESW14889">
        <property type="protein sequence ID" value="ESW14889"/>
        <property type="gene ID" value="PHAVU_007G025900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4711">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFEDPEH"/>
    <dbReference type="OrthoDB" id="68611at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015743">
        <property type="term" value="P:malate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034220">
        <property type="term" value="P:monoatomic ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020966">
        <property type="entry name" value="ALMT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31086">
        <property type="entry name" value="ALUMINUM-ACTIVATED MALATE TRANSPORTER 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11744">
        <property type="entry name" value="ALMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0407">Ion channel</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="217"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="271"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="297"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="641" mass="72433" checksum="38BFD77788502C2C" modified="2014-02-19" version="1" fragment="single">EDKNGRKFDEVFFFFPKITITKEGCHLAGSCALPSLRHTHMQKSLHFLCLLQLSSSVPFRNALCLIITTSTTTIIVSSFTMNKFTHSERFTARVGSFRHSFLEKSKERLLSKRDLVGFNDEGNDPSKRSFLDALSDRVVGLHNWSKDIASKLYEMGRNDRRKVVFAIKAGLSLAIVSLVIYIEEEQFSKYSIWAILTVVVVFEFSIGATLNKGFNRALGTLSAGVLALGIAQLSVFVGRAFEEIMIVVSIFIAGFFASYVRLYPAMKQYEYGFRVFLLTFCIVLVSGRHGLQFFSTAFYRLLLIGIGAGVSLSVNICIYPIWSGEDLHKLVVKNFTGVAASLEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSTQEETLVDFALWEPPHGPYKMFNYPWKSYVKVSGALRHCAFMVMAMHGCILSEIQSPPEKRLVFYEELQKVGIEGAKVLRTLGSKVERMERLSSDEILLDVHEAAEHLQMKIDRLSFLLVNYENWEAARLQKEKENDNLMDVKDFLNKQPEITSLNEIRDDPKLNIKIEPSTPSTPESHLPQTAKSLLGRSNLSFFADSVSETESKVYESASSLSLATFASNLIEFVARLQNLVDEFQDLSEKAKFKDPFEVEQPLLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC59</accession>
    <name>V7BC59_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G074000g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="18" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC59"/>
    <dbReference type="SMR" id="V7BC59"/>
    <dbReference type="Gramene" id="ESW15457">
        <property type="protein sequence ID" value="ESW15457"/>
        <property type="gene ID" value="PHAVU_007G074000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW15458">
        <property type="protein sequence ID" value="ESW15458"/>
        <property type="gene ID" value="PHAVU_007G074000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REPHANS"/>
    <dbReference type="OrthoDB" id="640180at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000005">
        <property type="entry name" value="Putative receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000058">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000001">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000039">
        <property type="entry name" value="receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003:SF318">
        <property type="entry name" value="OS03G0124200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27003">
        <property type="entry name" value="OS07G0166700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 15" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732312" description="Protein kinase domain-containing protein" evidence="15">
        <location>
            <begin position="42"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="423"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="504"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="784"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="794"/>
            <end position="807"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="824"/>
            <end position="844"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="532"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW15457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="844" mass="93628" checksum="27C24D6C3014EBF2" modified="2014-02-19" version="1">MSFPHPDTLQGIQRPKSNPSSMNTVFLIPFILLLLTPFSVSFSPTDNFLLSCGSHSNASLFSRIFTGDSTNPGSNFLSSDDSVSLAYQKPPPNLPTLYHTARVFSSTGGYRFNMKKNGTHFVRFHFSPFKAQSFDLKSAKFCVFVNGVSVLSNFQPPNDMLLKEFILNIESNFLEILFRPVGDSGFAFVNALEVFTAPMDFVIDFGARLAGPSGLEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGEAKPAVSTHIPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVSSGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALAINRLASPVYVDFVTNSDVSGFVQVSVGPSELSSSIRRNAILNGAEIMEMVNDVSTNVVHRRKNLWVLVGSVVGGIVVLFLVVAAFLLGTKCRNKKPKQRTLESVGWTPLSMFGGSSLSRSSEPGSHGLLGLKIPFAEIQSATNNFNRNLIIGSGGFGMVYKGVFRDNMKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQPPLSWKQRLEVCIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLKKGMLDKIVDPHLVGQIQQDSLNKFCETAEKCLSEYGVDRPAMGDVLWNLEYALQLQESGQQREPHANSSASEAASVTSSTVIPGNPSTNTRAERDYDNFSSDVSTSQVFSQLMNNEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDU1</accession>
    <name>V7BDU1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G043000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDU1"/>
    <dbReference type="STRING" id="3885.V7BDU1"/>
    <dbReference type="Gramene" id="ESW15088">
        <property type="protein sequence ID" value="ESW15088"/>
        <property type="gene ID" value="PHAVU_007G043000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S75A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEDSSWW"/>
    <dbReference type="OrthoDB" id="1930788at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004926">
        <property type="entry name" value="LEA_3a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35109">
        <property type="entry name" value="GLUTAMATE RACEMASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35109:SF1">
        <property type="entry name" value="GLUTAMATE RACEMASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03242">
        <property type="entry name" value="LEA_3a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="21"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="102" mass="11181" checksum="7E6E2B70085FA4E9" modified="2014-02-19" version="1">MVRGGITKSNLLLLGGAKRAKSGVSKFSGTAQAAAAERSGEVSKSGGRIEDSSWWVPHPRTGIYFPKGHEWVMDDVPEDAARLNQTFWFRNVDGVDIPRHQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE97</accession>
    <name>V7BE97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine/threonine protein phosphatase 2A regulatory subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G017700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE97"/>
    <dbReference type="SMR" id="V7BE97"/>
    <dbReference type="STRING" id="3885.V7BE97"/>
    <dbReference type="Gramene" id="ESW14791">
        <property type="protein sequence ID" value="ESW14791"/>
        <property type="gene ID" value="PHAVU_007G017700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2085">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KCLNSWN"/>
    <dbReference type="OrthoDB" id="768580at2759"/>
    <dbReference type="PhylomeDB" id="V7BE97"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000159">
        <property type="term" value="C:protein phosphatase type 2A complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019888">
        <property type="term" value="F:protein phosphatase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000548">
        <property type="entry name" value="Serine/threonine protein phosphatase 2A regulatory subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002554">
        <property type="entry name" value="PP2A_B56"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10257:SF28">
        <property type="entry name" value="SERINE_THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01603">
        <property type="entry name" value="B56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="457" mass="52832" checksum="929EE7C14BAA6557" modified="2014-02-19" version="1">MVGSPKKVSPSTRSPKKSSRTLQDLFVQESPHFTITSSSPTSGNEELLSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVSILKSSKKAVHGKVLVALVTMISANLFRPLPPPSSPSAITDLPEEDDPISVFSPLWSHLQIVYEILLKLVNSTEQKMLRECMDHSFLRNLLALFQSEDPRERETLKNVYHKMYSKFICDRSLMRKSMTEVLLNYVFETEKHPGIAELLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFNVIVEGMEKNLKWHWSKSVRQLTESVKVMLEEMDPDLYSKGLMDMEAKESMAHQEDIKRKKRWERIELEAAKNQFLNPQRYIRVSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGE8</accession>
    <name>V7BGE8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G115200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGE8"/>
    <dbReference type="STRING" id="3885.V7BGE8"/>
    <dbReference type="Gramene" id="ESW15933">
        <property type="protein sequence ID" value="ESW15933"/>
        <property type="gene ID" value="PHAVU_007G115200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPHW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RETPANW"/>
    <dbReference type="OrthoDB" id="1937889at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.2700:FF:000001">
        <property type="entry name" value="Transmembrane protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056284">
        <property type="entry name" value="AIR9-like_A9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055474">
        <property type="entry name" value="DUF7046"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31149">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31149:SF10">
        <property type="entry name" value="OS05G0100900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23080">
        <property type="entry name" value="DUF7046"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23197">
        <property type="entry name" value="IG_AIR9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIR9-like A9" evidence="3">
        <location>
            <begin position="530"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7046" evidence="2">
        <location>
            <begin position="620"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7046" evidence="2">
        <location>
            <begin position="646"/>
            <end position="745"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="456"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="145"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="482"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="749" mass="83149" checksum="FC2A179C56CB7435" modified="2014-02-19" version="1">MENGHDGKLAQKLSGLSINQHSEQQVHDQSNLSSNNNDNLYQVMKAVEAAEATIKQQAEENDRLKSELLSRVQELENYRKKESVEQKSGFVAPWKDQDHRSYEARQSGPAIARGNTGDHSDNSQINGTLRVQPNDQLPMDNIGYSQLSSPSTRSVSPSRHLPEGDHDPRFYSPQQGLMPVAEVNSNNNSLLKQDVAIKIQEHEEEIILLRKHLADYSVKEAQIRNDKYLLEKRIAYMRLAFDQQQQDLVDAASKALSFRQDIIEENIRLTYALQDAQQERSTFVSSLLPLLAEYSLQPPVADAQSIVSNVKVLFKHLQEKLLLTESKLKESQYQLMPWRSDTNNANVATQSHSIGAPLTTSNKNSLELVPRNVYSQVKPHVSVDAQAGTDWNLLGRHQNGFSGGVATGVDADDLGRYSPLASRNFSAHDASTHLVVTQGDTHLGHYGEEMTNKQVTFREPVSNNEVDDPDGDGTHSERETPANWSSGNTPYTTTVDDPGPSYSPYLPPVLEEPNSSFSEAADEDPLPAIEGLQISGEAFPGRELQACGYSINGTTSCNFEWIRHLEDGSFNYIDGAKQPAYLVNADDVGTLLAIEVQPLDNRKRKGEPVKVFANDSKKITCDPEMQSHIEKAFYSGHASYKVSHSTGYLDIWEPATLAIKREGYSIKCSGPNGVLITEKFSPSTQVAIPYGHPSEFIIIGSSGAEHLLKAENNSTEISGARDTIVLTLRLFILRKPGEKRRVKKKGLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH50</accession>
    <name>V7BH50_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G102900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH50"/>
    <dbReference type="Gramene" id="ESW15796">
        <property type="protein sequence ID" value="ESW15796"/>
        <property type="gene ID" value="PHAVU_007G102900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PFHKEER"/>
    <dbReference type="OrthoDB" id="1908613at2759"/>
    <dbReference type="PhylomeDB" id="V7BH50"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044787">
        <property type="entry name" value="HHO5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058673">
        <property type="entry name" value="HHO5-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003:SF16">
        <property type="entry name" value="TRANSCRIPTION FACTOR HHO2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26575">
        <property type="entry name" value="HHO5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="207"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="91"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="191"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="319"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="199"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="348"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="365"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="383" mass="42272" checksum="89D324CF1698BA89" modified="2014-02-19" version="1">MYFFTEKIQRLKMGFPDYIQALEEERRKIQVFCKELPLSLELVTQAIEACKQQLSGTTSEYNLNGQSECSERTTSTEGPVLEEFIPIKKRASSSPCCDEDDEDNEQHSLKQSVLNENNDSDKRKSDWLRSVQLWNPDPPAEEDATRKVPGMELKRSGSIGGAFHPFHKEERAAKAAESLCKAPSSTRVAAASSSAGELTPEKNLNEGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPLVHNSSSPQAAPFVLVGNIFVQSPEYAAVATSTASREVITVAAPGGVYAPVATHPTPVSQPSADSIKKPQFKKSKHSEHSNSDERAHHSEGAVHSNSPTSSSSTHTSTSPGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJV6</accession>
    <name>V7BJV6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Spermidine hydroxycinnamoyl transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G024700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJV6"/>
    <dbReference type="SMR" id="V7BJV6"/>
    <dbReference type="STRING" id="3885.V7BJV6"/>
    <dbReference type="Gramene" id="ESW18242">
        <property type="protein sequence ID" value="ESW18242"/>
        <property type="gene ID" value="PHAVU_006G024700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSYG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHAKHNH"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.559.10:FF:000008">
        <property type="entry name" value="Tryptamine hydroxycinnamoyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF175">
        <property type="entry name" value="SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW18242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="449" mass="50346" checksum="D79B04A65A066A18" modified="2014-02-19" version="1">MVTIKASYTVVPNQPTPEGIQWLSDIDQVARLHHTPTIYIYHAKHNHGTLIQQMRNSLSKILCHYYPLAGRLRKLEEGGRLELDCNAKGVVLIEAESTKTVQDYDDFFGESIKDLVPTVDYTKILIQELPLLLVQVTSFLGHEAFSIGVAISHILCDGVAGVQFINSWAKLARGDTLEPHEMPFLDRTVLRFIAPPSPQRFDHLEFKPLPLILGRCDNTAEKNKRVKATLLKLTAEQVGKLKNKANADESTKGSRPYSRFEAIAAHVWRSACKARGLDENQPTVVRFNADIRNRLIPPLPANYFGNALALTAASSQVGEILSNSLGRAAKKIREAIEVLTYEYISSQIDVIRGQDHVDKARALYFGANEGKDALFFGNPNLLITSWMRMPMHEADFGWGKAVYLGHAGVATQDRALITQSLDGDDSIIVFLPFQMEHMQLFKDFFYEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BL30</accession>
    <name>V7BL30_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Cellulose synthase-like protein E1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G058700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BL30"/>
    <dbReference type="SMR" id="V7BL30"/>
    <dbReference type="STRING" id="3885.V7BL30"/>
    <dbReference type="Gramene" id="ESW18652">
        <property type="protein sequence ID" value="ESW18652"/>
        <property type="gene ID" value="PHAVU_006G058700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS7H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAFRWNL"/>
    <dbReference type="OrthoDB" id="1929172at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000138">
        <property type="entry name" value="Cellulose synthase isolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="523"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="561"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="652"/>
            <end position="671"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="687"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="721"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="451"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="286"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="310"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00037405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW18652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="752" mass="86312" checksum="FAE01445D13A9784" modified="2014-02-19" version="1">MEIIEQTPLFDTKKGRGRLLYRSFAVSLSVCICFIWIYRFSHIIDSKGEDGKWAWLGMLGAELWFGFYWLLTQAFRWNLVFRQPFRNRLTQRYEKKLPGVDIFVCTADPDIEPPMMVINTVLSVMSYDYPTEKLNVYLSDDAGSQITFYALLEASNFAKYWIPFSKRFKVEPRSPAAYFKSIDSSGYSSDSDQVKELTTIKKLYHEMKRHIEDATKFGEVPKEVRLKHKGFSQWDSYSSRRDHGTILEILVHKRDPENSKDVDGFLLPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIVLNVDCDMYSNHSQSVRDALCFFMDEEKGHKIAYVQFPQIFENVTKNDLYGSSLLAISEVEFPGADGCGGPLYIGSGCFHKRESLCGLKFSDQYRNDWNTSEDYQFKEASLKELEEESKALASCTYEENTLWGKEMGLRYGCPVEDVITGLAIQCQGWKSVYYNPPRKAFLGLAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRISLAQQMGYSVYCLWAPNCFATLYYSIIPSLYLLKGIPLFPKMSSPWFIPFAYIIVGEGTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFACIDTILKHFGFSDSTFIITTKVTEEEASKRHEKEIMEFGTSSPMLTLLATFALLNLFCFLSVLKDAALREGGFEICETMALQFLLCGFLVIINLPIYQGLFLRKDNGRLPGSVAIKSILLALCVFISFSLYLDWEGGICGYRTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BL76</accession>
    <name>V7BL76_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G232400g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BL76"/>
    <dbReference type="SMR" id="V7BL76"/>
    <dbReference type="STRING" id="3885.V7BL76"/>
    <dbReference type="Gramene" id="ESW17351">
        <property type="protein sequence ID" value="ESW17351"/>
        <property type="gene ID" value="PHAVU_007G232400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1650">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMATHSA"/>
    <dbReference type="OrthoDB" id="1412231at2759"/>
    <dbReference type="PhylomeDB" id="V7BL76"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006885">
        <property type="term" value="P:regulation of pH"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057291">
        <property type="entry name" value="CHX17_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057290">
        <property type="entry name" value="CHX17_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050794">
        <property type="entry name" value="CPA2_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468">
        <property type="entry name" value="CATION/H + ANTIPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468:SF166">
        <property type="entry name" value="CATION_H+ EXCHANGER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23256">
        <property type="entry name" value="CHX17_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23259">
        <property type="entry name" value="CHX17_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0630">Potassium</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="202"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="232"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="274"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="319"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="348"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="381"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="414"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H+ exchanger transmembrane" evidence="12">
        <location>
            <begin position="53"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter central" evidence="13">
        <location>
            <begin position="491"/>
            <end position="626"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter C-terminal" evidence="14">
        <location>
            <begin position="627"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="797"/>
            <end position="816"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00038341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF23256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF23259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="816" mass="90256" checksum="31154D5671AD302B" modified="2014-02-19" version="1">MASGANAATSIPGLACYNTTIDPTNIIWRSDNVLADRVPLLSIQIAYNILVSTFFHHILKQFNLPLTVAQMLGGVLLSSSFLGRIPGVLQLVYRPEGILTVETFANVGIMLYVFLSGLEMNCDTILRSSRQAIIIAVASIFIPALVGAGFLALERNLAGESSIALSAKGYVFWCTILSVTSFPVLARLLSDLKILYTRLGKDALTAAMLIDTFGWILFSLLIPYSHEGGKPLLSAMCTLMFILFCFCVVRPILERLIEHRMRSESWNSSKLLDVMIGLFVCSYITDLIGAHHVVGAFVYGLILPSGKFADLMLEMLHDFVTAFIVPVYFASFGFRLNLEALWSQSHSVLLPLFMVFLLAIPKILSSLLVTFYYGMSSRDGVGLGLLLNTKGMMAVILISIAWDKNFLDSYSFTIMILAILFMTTAASPFINAIYKPNLRFKQTQQRTVQKLWCEAELRVAACVHNAHQAHGMIHILEATNATRNSPLHVSVLHLVELTRLGTGLLVAQMDNSNVQGGSSESQYGSQTEFETICNAFNEFVEEYNAARFDTSGIVATYDTIHQDIYNVTEEKRANLILLPFHKELSSGDLETVNTTFGDINQNVLQAPPCSVGILVNRGLKSLSKVTMSTTVIFIGGPDDREALSIAWRMATHSATKLHVIRLLVSGTEVEEEKAFQSDSSGVLSTKMDSVMQKELDDEHIFHFRHKGSYNNETITYSEIEVGIETGEEIPLILNEIDKPGCDLYILGQGSGKNFTVFQRLLEWCDNPELGVMGDIISSTSFGTHSSLLVVQQYTTERKSKPLRGKKSHSNESDQML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLU2</accession>
    <name>V7BLU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">CONSTANS-like zinc finger protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G005200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CONSTANS family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLU2"/>
    <dbReference type="STRING" id="3885.V7BLU2"/>
    <dbReference type="Gramene" id="ESW18005">
        <property type="protein sequence ID" value="ESW18005"/>
        <property type="gene ID" value="PHAVU_006G005200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUBA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANIGNTW"/>
    <dbReference type="OrthoDB" id="153872at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd19821">
        <property type="entry name" value="Bbox1_BBX-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010402">
        <property type="entry name" value="CCT_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049808">
        <property type="entry name" value="CONSTANS-like_Bbox1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31717">
        <property type="entry name" value="ZINC FINGER PROTEIN CONSTANS-LIKE 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31717:SF131">
        <property type="entry name" value="ZINC FINGER PROTEIN CONSTANS-LIKE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06203">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00336">
        <property type="entry name" value="BBOX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51017">
        <property type="entry name" value="CCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="107"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="B box-type" evidence="12">
        <location>
            <begin position="189"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="B box-type" evidence="12">
        <location>
            <begin position="232"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="CCT" evidence="13">
        <location>
            <begin position="536"/>
            <end position="578"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="326"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="331"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="350"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW18005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="593" mass="65720" checksum="A8FEEF1E5B19BF8B" modified="2014-02-19" version="1">MAPLALYFFPLWFALFITFAYVTLPTHSLSLSLSHTHTPFALFFFSFHISSTFIHLLSSYSFLSPLLNTPHHTSLARAEARREERETHTKSKREKGPFVLFKKFSSFYFQDSFFAFKFCIQIIFFFFFSEKATPFCLLILFSLSSLPSASASSDRENFCFFRVYLGLSRLLLGGDSLIYSKGQEKKSVKMGYICDFCGDQRSMVYCRSDAAYLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCVEEKISLCQNCDWLGHGVSTSSTHKRQAISCYSGCPSAAELSSIWSFVLDIPSIRESTCEQELGLMSINENNKSVGVLPENGNVSGSDQVTDLPSLDKSLVGTSSVPESSSKPPAGPANECLPKLYCPAAKCPALCEDDNLYDDFDMDEMDLNLENYEELFGVALSHSEELFENGGFNSLFGTKDMSAGDSSCQDAIAAEGSSVGLVNATQPACSNAASADSILSTKTEPVLCLTGRQAQSNLSFSGITGESSAADYQDCGASSMLLRGEPPWFAPCPENSLQSANRSNAVLRYKEKKKARKFEKQVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSTTRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNU0</accession>
    <name>V7BNU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Mitochondrial uncoupling protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G063600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNU0"/>
    <dbReference type="Gramene" id="ESW18710">
        <property type="protein sequence ID" value="ESW18710"/>
        <property type="gene ID" value="PHAVU_006G063600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0753">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPRGVIC"/>
    <dbReference type="OrthoDB" id="448427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050391">
        <property type="entry name" value="Mito_Metabolite_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45618">
        <property type="entry name" value="MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="18"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="8">
        <location>
            <begin position="114"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW18710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="200" mass="21765" checksum="DDCE60780510AB95" modified="2014-02-19" version="1">MVPYPIQGVENSTSAQRSGIFFKLVIGALAITIANPTDLVKVRLQSEGQLPSGVPRRYSGAIDAYLTILRQEGIGALWTGLGPNIARNAIINAAELASYDQVKRTILKIPGFMDNVYTHLLAGLGAGLFAVLIGSPVDVVKSRMMGDSTYKSTFDCFVKTLLNEGFLAFYKGFLPNFGRVGAWNVLMFLTFEQAKRVLRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNU9</accession>
    <name>V7BNU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Aminotransferase class I/classII large domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G063400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6 11">
            <text>L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:21824"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="EC" id="2.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNU9"/>
    <dbReference type="STRING" id="3885.V7BNU9"/>
    <dbReference type="Gramene" id="ESW18708">
        <property type="protein sequence ID" value="ESW18708"/>
        <property type="gene ID" value="PHAVU_006G063400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1411">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1423242at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000796">
        <property type="entry name" value="Asp_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879:SF54">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="8">
        <location>
            <begin position="170"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00049185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW18708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="260" mass="29476" checksum="5678D425F84CB83E" modified="2014-02-19" version="1">MKSNKAYLALMAFQLSCIGIKYEASNTNPFHQSTLFLLLTAMFSHVLASVADINKPITTITFHFSGILVCQTLLWILIPQLLWFSVINFLLLLLVKFLYFDFLTQLILLSFNCITQLLPGSPPNIVEMPNTEPQQPQESQLLYVFGDWKQSHDIYSFKAFSLSPQTLLNPSEDQWRESSSQIKVKGHFPCFDMAYEGFTSGNPERGAKAIRVFVEDGHLIELDAVMQKNMGLDGQRVECLSVLCEDEKQALAVHRQLPAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP44</accession>
    <name>V7BP44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Protein phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G073500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="1"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP44"/>
    <dbReference type="SMR" id="V7BP44"/>
    <dbReference type="STRING" id="3885.V7BP44"/>
    <dbReference type="Gramene" id="ESW18825">
        <property type="protein sequence ID" value="ESW18825"/>
        <property type="gene ID" value="PHAVU_006G073500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1379">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANTIAWM"/>
    <dbReference type="OrthoDB" id="60843at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039123">
        <property type="entry name" value="PPTC7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320:SF60">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C 26-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0464">Manganese</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="62"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU366020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW18825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="33427" checksum="10225DE722623341" modified="2014-02-19" version="1">MAIPMLRAAMISHSQSQPLIHSLSAIDETAKRRKRVVLSSSSSSPSELNPLIRSEVSFCVGTCLIPHPKKVSTGGEDAFFVSNYNGGVIAVADGVSGWAEEDVDPSLFPRELLANASNFVEDEEVNYDPQILIRKAHAVTSSTGSATVIVAMLEKNGTLRIANVGDCGLRLIRNGHVVFSTSPQEHYFDCPFQLSSERVGQTYLDAAVCNVKLMEGDIIVMGSDGLFDNVFDHEIVQTIVRYKDVAETAKSLANLASSHALDSNFDSPYSLEARSRGFKPPLWKKILGKKLTGGKLDDITVIVGQVVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP80</accession>
    <name>V7BP80_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">OVATE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G076900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP80"/>
    <dbReference type="STRING" id="3885.V7BP80"/>
    <dbReference type="Gramene" id="ESW18860">
        <property type="protein sequence ID" value="ESW18860"/>
        <property type="gene ID" value="PHAVU_006G076900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZCU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RFYVEIC"/>
    <dbReference type="OrthoDB" id="1871608at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044686">
        <property type="entry name" value="OFP17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006458">
        <property type="entry name" value="Ovate_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34042">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR OFP17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34042:SF1">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR OFP17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04844">
        <property type="entry name" value="Ovate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51754">
        <property type="entry name" value="OVATE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="OVATE" evidence="6">
        <location>
            <begin position="59"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="15632" checksum="1EF1D6AA4497808F" modified="2014-02-19" version="1" fragment="single">FKTQKPFTTKTRSSSLLLSALRSQKKSKDKDVHETPLFPSCSPLVPPYVRPNRVDNREASFQVEDTCKNFEKYLVEMVVEEGKMKDLMDVEELLHCWKKLKCPVFIDLVCRFYVEICKDLFSLDSEEASSFPTNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQW7</accession>
    <name>V7BQW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ubiquitin-like protease family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G202100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C48 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQW7"/>
    <dbReference type="SMR" id="V7BQW7"/>
    <dbReference type="STRING" id="3885.V7BQW7"/>
    <dbReference type="Gramene" id="ESW20359">
        <property type="protein sequence ID" value="ESW20359"/>
        <property type="gene ID" value="PHAVU_006G202100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0779">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IESCWFE"/>
    <dbReference type="OrthoDB" id="442460at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008234">
        <property type="term" value="F:cysteine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.310.130:FF:000006">
        <property type="entry name" value="Probable ubiquitin-like-specific protease 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.418.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.130">
        <property type="entry name" value="Ubiquitin-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003653">
        <property type="entry name" value="Peptidase_C48_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057375">
        <property type="entry name" value="ULP2A/B_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47764">
        <property type="entry name" value="UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47764:SF12">
        <property type="entry name" value="ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02902">
        <property type="entry name" value="Peptidase_C48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25352">
        <property type="entry name" value="PH_ULP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50600">
        <property type="entry name" value="ULP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Ubiquitin-like protease family profile" evidence="8">
        <location>
            <begin position="365"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="81"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="146"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="822"/>
            <end position="868"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="159"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="832"/>
            <end position="851"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="858"/>
            <end position="868"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00057729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="947" mass="106969" checksum="A55B0723A8F4A233" modified="2014-02-19" version="1">MTRRNRSSSSSTKKFDVFEFNDEDYSIEKASRKFFSKVENPSRSRSSPVTKHDFLQAFASGSNSKPVSIDVTADHIDLDEEQEEMTQCSTEEIAAQPLEVIDDDDGRGNDDGYNREENDDTRLQLSADEKMSGYSDFVESDFDSKNESLGVASDDDDASQTSSSSTSTSNPSADEVKFGDQLVEHDDSAAFVINDIEKVVDVIPDFIQFEDLYSTRSQLTFSCNSLKLEGLTINGTRETLKIEWSTQDIIKIESCWFGNIETALINLLLKSKDYSEAGNTNQNPGFKLLKFAVYDSFWYKAEEAIKLLDTRYTDIWSTLFDSDADNSGNISALGQHYFFSQNRYFPNFDEAFDEVIYPKGEPDAVSISKRDLELLQPQTFINDTIIDFYIKYLKNKLPTDEQDHFHFFNSFFFRKLADLDKDPSSACDGRAAFQRVRKWTRKVNLFEKDYILIPINYSLHWSLIVICHPGEVTCCQDEEINESSKVPCILHMDSLKGSHKGLKNVFQSYLCEEWKERHSNVVDDVSSKFLQMRFISLELPQQENLYDCGLFLLHYVERFLEEAPGNFNPFMITKFSDFLSSNWFPPPEASLKRSHIQNLIYDIFENNSLESRPTDCLDKGLPSEDPAIVVKTKVEEDSLGGCCYSDLWCVKNPLNSSIELETADIQHPAASASPGRVSSCLGGPALVSEDDLQVISHSDCLQMSACDQRGFLSPLEEIDESDEETGLSVEREKSQLVYDFPSTSYASKDHGASESSQHGFSVNFVKAFENHSQSRTSTTLSWLPLNTSTHEDQPLNKIDESKIEDKTVVECLSTSVEELTDYVVPDSPGANDADKASLEEEDTIVNKEKPVAFESDEPDAKRPKHDADVSIVESPSSFREYMNSVTHPILDLSQKTTSHEQDTLVSDKKETVAFECDEADAKRPKIMIEGGGSRRRLTRSMPKEACV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRU4</accession>
    <name>V7BRU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G009400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRU4"/>
    <dbReference type="SMR" id="V7BRU4"/>
    <dbReference type="STRING" id="3885.V7BRU4"/>
    <dbReference type="Gramene" id="ESW20722">
        <property type="protein sequence ID" value="ESW20722"/>
        <property type="gene ID" value="PHAVU_005G009400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGSLCCI"/>
    <dbReference type="OrthoDB" id="5296287at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015145">
        <property type="term" value="F:monosaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17361">
        <property type="entry name" value="MFS_STP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000002">
        <property type="entry name" value="Sugar transport protein 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044778">
        <property type="entry name" value="MFS_STP/MST-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF30">
        <property type="entry name" value="SUGAR TRANSPORT PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
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    </dbReference>
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        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
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    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="135"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="317"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="382"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="420"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="447"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="25"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
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        </source>
    </evidence>
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    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="504" mass="55038" checksum="9F92C02F8204B914" modified="2014-02-19" version="1">MAVGFAIASENGQSNGKITLYVVLSCMMAGMGGVIFGYDIGTAGGVTSMDSFLKKFFHKVYLKKEDAKVSNYCVFDSQLLTSFTSSLYIAGLVTTFFASHVTKAFGRKPSIVAGGAAFLAGTALGGAAFNVYMLIVGRLLLGVGVGFANQAVPLYLSEMALPRLRGAISNGFQLSICIGIVCANLINYGAEKIEGGWGWRVSLALAAVPASFLTLGALFLPETPNSLIQRSHDHQKAKLLLQRIRGTEDVEAEFDDLIKASSSKTNNKQSLKIILKPRYRPQLVMAVVIPFFQQFTGINVIGFYAPLLFRTIGLGESASLLSAVVTGVVGTGSTFISMFIVDKLGRRTLFIIGGIQMFASQCIVGGIMAFHLRDHGGLSQGYACVVLVMILIYVAGFGWSWGPLGWLVPSEIFPLEIRSVGQSITVAVSFIFTFTVAQTFLSMLCHFKYGIFFFFGGWVVVMTIFVYYFLPETKSVPLEQMEKVWQDHWFWKRIVSEISDRDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTM0</accession>
    <name>V7BTM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RIN4 pathogenic type III effector avirulence factor Avr cleavage site domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G204500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTM0"/>
    <dbReference type="Gramene" id="ESW20383">
        <property type="protein sequence ID" value="ESW20383"/>
        <property type="gene ID" value="PHAVU_006G204500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW20384">
        <property type="protein sequence ID" value="ESW20384"/>
        <property type="gene ID" value="PHAVU_006G204500g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HANIGNE"/>
    <dbReference type="OrthoDB" id="1885368at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008700">
        <property type="entry name" value="TypeIII_avirulence_cleave"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33882">
        <property type="entry name" value="PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33882:SF11">
        <property type="entry name" value="RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05627">
        <property type="entry name" value="AvrRpt-cleavage"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RIN4 pathogenic type III effector avirulence factor Avr cleavage site" evidence="2">
        <location>
            <begin position="10"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="106" mass="11744" checksum="10B8D8AB780338F1" modified="2014-02-19" version="1">MEQKENTPVMSVPQFGGWDQRAPGDTDYSMVFTQARANKKHQKTNITEIKPVIVGNEGVFSNSNHGRAHGHGHGHGRGHGQTHTHEDPGVMGKRKMLTYINCCIKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTV7</accession>
    <name>V7BTV7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G0666000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTV7"/>
    <dbReference type="Gramene" id="ESW21389">
        <property type="protein sequence ID" value="ESW21389"/>
        <property type="gene ID" value="PHAVU_005G0666000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW21389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="19" mass="2135" checksum="8DFF17209FFB186D" modified="2014-02-19" version="1" fragment="single">DQKMDDTARNGQGEDELGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BU23</accession>
    <name>V7BU23_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Histone H4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G072400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the histone H4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BU23"/>
    <dbReference type="SMR" id="V7BU23"/>
    <dbReference type="STRING" id="3885.V7BU23"/>
    <dbReference type="Gramene" id="ESW21459">
        <property type="protein sequence ID" value="ESW21459"/>
        <property type="gene ID" value="PHAVU_005G072400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3467">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="986549at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22912">
        <property type="entry name" value="HFD_H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001951">
        <property type="entry name" value="Histone_H4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10484">
        <property type="entry name" value="HISTONE H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00623">
        <property type="entry name" value="HISTONEH4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00417">
        <property type="entry name" value="H4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="6 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="106" mass="12617" checksum="F26C6DA70CD9328D" modified="2014-02-19" version="1">MKDEMRNEDFSVHQSLYNLKKPQKAIFKFKNRAIRNTPKRRYVASWFVQISVLIYDETHDVLQIFLENIICDVVSYTERARRNTFTTMDIVYALKRQGKTLYGFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUC2</accession>
    <name>V7BUC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Purple acid phosphatase</fullName>
            <ecNumber evidence="11">3.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_005G084900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>a phosphate monoester + H2O = an alcohol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15017"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:67140"/>
            <dbReference type="EC" id="3.1.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.2" evidence="11"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUC2"/>
    <dbReference type="Gramene" id="ESW21612">
        <property type="protein sequence ID" value="ESW21612"/>
        <property type="gene ID" value="PHAVU_005G084900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1378">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYGQYTP"/>
    <dbReference type="OrthoDB" id="45007at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003993">
        <property type="term" value="F:acid phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00839">
        <property type="entry name" value="MPP_PAPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.380:FF:000001">
        <property type="entry name" value="Fe(3+)-Zn(2+) purple acid phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.21.10:FF:000034">
        <property type="entry name" value="Fe(3+)-Zn(2+) purple acid phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.380">
        <property type="entry name" value="Purple acid phosphatase-like, N-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041792">
        <property type="entry name" value="MPP_PAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039331">
        <property type="entry name" value="PAPs-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025733">
        <property type="entry name" value="PAPs_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015914">
        <property type="entry name" value="PAPs_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008963">
        <property type="entry name" value="Purple_acid_Pase-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22953">
        <property type="entry name" value="ACID PHOSPHATASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22953:SF143">
        <property type="entry name" value="PURPLE ACID PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14008">
        <property type="entry name" value="Metallophos_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16656">
        <property type="entry name" value="Pur_ac_phosph_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49363">
        <property type="entry name" value="Purple acid phosphatase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149028" description="Purple acid phosphatase" evidence="11">
        <location>
            <begin position="22"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="domain" description="Purple acid phosphatase N-terminal" evidence="14">
        <location>
            <begin position="53"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="12">
        <location>
            <begin position="156"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="Purple acid phosphatase C-terminal" evidence="13">
        <location>
            <begin position="380"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF14008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF16656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW21612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="461" mass="53023" checksum="2EA20A15A7086D1A" modified="2014-02-19" version="1">MGGKSFGAAALLLILLNVAHGGKTSPFMRKVRRTEDMPLHSDVFAAPSGYNAPQQVHITIGDHVGRAMIVSWVTVDEPGNSLVQYWSEDSSQKREVAKGNHVTYRFFNYSSGFIHHCTLRDLEFNKKYYYEIGIGHTIRQFWFMTPPEVHPDAPYTFGLIGDLGQTFDSNTTLAHYESNPHKGQAVLFVGDLSYADNHPNHDNVRWDTWGRFVERNTAYQPWIWATGNHELDYAPELGETEPFKPFKHRYHVPYKASGSTEPFWYSVKIASAHIIVLASYSAYGKYTPQYEWLEAELKKVDRSKTPWLIVLVHSPWYNSYTYHYMEGESMRVMFEPWFVKYKVDVVFAGHVHAYERSERISNIEYNLVNGRCGPVKDLSAPVYVNIGDGGNIEGLATNMTNPQPEYSAYREASFGHAIFEIKNKTHAHYSWHRNEDDFAVTADSMWFFNRVWHPVDDSTTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVW0</accession>
    <name>V7BVW0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">NPH3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G128400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NPH3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVW0"/>
    <dbReference type="STRING" id="3885.V7BVW0"/>
    <dbReference type="Gramene" id="ESW22114">
        <property type="protein sequence ID" value="ESW22114"/>
        <property type="gene ID" value="PHAVU_005G128400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTAS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVERMIH"/>
    <dbReference type="OrthoDB" id="624345at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043454">
        <property type="entry name" value="NPH3/RPT2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027356">
        <property type="entry name" value="NPH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32370">
        <property type="entry name" value="OS12G0117600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03000">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51649">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="BTB" evidence="7">
        <location>
            <begin position="25"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="NPH3" evidence="8">
        <location>
            <begin position="210"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="594"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="543"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="603"/>
            <end position="615"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW22114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="634" mass="70799" checksum="467C3BA58FCDE892" modified="2014-02-19" version="1">MAPTGKLSGFRREGTDWFCNGGLPSDITVSIEGVTFHLHKFPLVSKSGKIAKAHDEFKDIDMKTLKMVLEDFPGGPDTFLIAAKFCYGYRVELTARNVVLVHCAAEYLEMTDEFGEGNLLSKSESFFHKNTLRSWKDCILALQSSEPVLPRAEKLQLVGKCLNALSMMVCTDPSLFGWPMKMYGSFQSPGGSILWNGINTGARIRSSESDWWFEDISYLSVSLFERLIKTMQARGIRPENLAGAIMYYSRKHLPGLGRWQGGQGGKTRTVASFSLTPATVDQRVLLESIEKLLPDKKGKSYCRFLLGLLRVALILNVTQTCKDSLERRIGMQLELATLDSLLIPTYSDSDALYNTECIEQIVHYFISTESNLTAFSPSSRDQQTPASPSSESLRKVSKLMDSYIAEIASDVNLKPGKIRRLADALPESSRLLHDGLYRALDIYFKAHPWLSDREKEELCNIIDYQKLSIHACAHASQNDRLPLRVVLQVLFFEQLHLRTALAGCLNALDGEIAPAAPVPVTGLVETAGEIVQRDGWVTVVRENQVLKVDMDRMSSRVGELEEEFSKIKQEMKSVAKSHSSRSSPRLVARKIGCKLVPRPSDAQPESLNRTGSTPRASIEWARRSLKSKNSESFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWD4</accession>
    <name>V7BWD4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G143900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWD4"/>
    <dbReference type="SMR" id="V7BWD4"/>
    <dbReference type="STRING" id="3885.V7BWD4"/>
    <dbReference type="Gramene" id="ESW22317">
        <property type="protein sequence ID" value="ESW22317"/>
        <property type="gene ID" value="PHAVU_005G143900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NAITFRH"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000799">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At1g07590, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001578">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001965">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45717">
        <property type="entry name" value="OS12G0527900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45717:SF11">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="213"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="352"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="512" mass="59176" checksum="C62BB45FADA98C68" modified="2014-02-19" version="1">MISTRMRSVKGLFAPNWLVQVIRRTPCGTVSLRLFCAQATQNQDSLSRRIERLPKGESVGSVFRGWMRDGYPVHGGDVFHSINRLRRLNMNKRALQVMEWVIRERPYRPRELDYSYLVEFTVKLHGISHGEQLFSRIPVEFQNELLYNNLVIACLDKSAIRLSLEYMKKMRELRFPISHLVFNRLIILHSSPGLKKMIPKLLTQMKADKVTPHVSTYNILMKIEASEHNLENLLKVFCRMKEAQVEPNEISYCILAIAHAVARLYAATEAYVEAVEKSITGKNWSTLDVLLMLYGYLGNQKELERIWTIIQELPSVRSKSYMIAIEAFGRIGQLNRAEEIWLEMKSTKEFKSVEQFNSMMSIYCKHGFVDKAAPLYKNMKASGCKPNAITYRQLALGCLRSGMQEQALKTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYDPNLLKRMILGGARPDAETYSLLKIAEQFRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWQ8</accession>
    <name>V7BWQ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">aminodeoxychorismate lyase</fullName>
            <ecNumber evidence="8">4.1.3.38</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G074400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16201"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17836"/>
            <dbReference type="ChEBI" id="CHEBI:58406"/>
            <dbReference type="EC" id="4.1.3.38"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 4-aminobenzoate from chorismate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.38" evidence="8"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWQ8"/>
    <dbReference type="SMR" id="V7BWQ8"/>
    <dbReference type="STRING" id="3885.V7BWQ8"/>
    <dbReference type="Gramene" id="ESW21480">
        <property type="protein sequence ID" value="ESW21480"/>
        <property type="gene ID" value="PHAVU_005G074400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0975">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FASIWID"/>
    <dbReference type="OrthoDB" id="25921at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008696">
        <property type="term" value="F:4-amino-4-deoxychorismate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01559">
        <property type="entry name" value="ADCL_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.10.10:FF:000002">
        <property type="entry name" value="D-alanine aminotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.470.10:FF:000008">
        <property type="entry name" value="D-amino-acid transaminase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="entry name" value="D-amino Acid Aminotransferase, subunit A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017824">
        <property type="entry name" value="Aminodeoxychorismate_lyase_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050571">
        <property type="entry name" value="Class-IV_PLP-Dep_Aminotrnsfr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42743">
        <property type="entry name" value="AMINO-ACID AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42743:SF8">
        <property type="entry name" value="OS01G0238500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="D-aminoacid aminotransferase-like PLP-dependent enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00035676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="345" mass="37752" checksum="D780D3DB8369C8AC" modified="2014-02-19" version="1">MGNPTVSSRKAPEVENDDDFRVHVFSSSSELLEKLHEKWSSVEKQPYPAMYSSIFGGIILDPAMMVIPIDDHMVHRGHGVFDTSIVLDGYLYELDVHLDRFLLSASKAKISSPFSQSTLRSIIIQLTAASKCKKGTLRFWLSAGPGDFLLSPAGCPTSAFYAVVIDHDFSQCKEGVKVITSNVPMKPPLFATAKNVNYLPNVLSVMEAEEKGASSSIWVDEEGYIAEGPNVNVAFITQDKELVMPPFDNILRGCTAKRLLELAPKLVDQGLLKGVATKKLTVEEAKAAAEMMYVGSTLPVLPIIVWDDQPIGTGSVGELTMLLSNLLWDDMVTGSDTQRIPVPYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWS6</accession>
    <name>V7BWS6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">hAT-like transposase RNase-H fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G155200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWS6"/>
    <dbReference type="STRING" id="3885.V7BWS6"/>
    <dbReference type="Gramene" id="ESW22462">
        <property type="protein sequence ID" value="ESW22462"/>
        <property type="gene ID" value="PHAVU_005G155200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1121">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWESAKI"/>
    <dbReference type="OrthoDB" id="1745426at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025525">
        <property type="entry name" value="hAT-like_transposase_RNase-H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052035">
        <property type="entry name" value="ZnF_BED_domain_contain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481:SF2">
        <property type="entry name" value="BED-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46481">
        <property type="entry name" value="ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14372">
        <property type="entry name" value="hAT-like_RNase-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140996">
        <property type="entry name" value="Hermes dimerisation domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="hAT-like transposase RNase-H fold" evidence="2">
        <location>
            <begin position="189"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="33495" checksum="7F11D77F662AE139" modified="2014-02-19" version="1" fragment="single">EKKIHRLLEKDEGDLNVMNSKLVEFNQGRTLVAFTKMIIINEHPFKFIENEGFSKFIQKVQPYFKIPSHENLKCLLSSNKHMVLLTTVDHKGETMGIKLENCLKGWGIAKIGCVTVDNASANSEVIAYLNRGVKFMHMWCFTHILNLTVTDGLKEIDSSINKTKVICTFVMFSPSKLATFKKCAEEILVSIHKSFNKWRIARGYTNTKDMALKFSKYWESAKINYLLWFASLDPCFKFDYIQLCFKKMYVVDKSKEIAQKLDDLIENCFLNMQQKILFTLKVVLGVLWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX57</accession>
    <name>V7BX57_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G166300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX57"/>
    <dbReference type="SMR" id="V7BX57"/>
    <dbReference type="STRING" id="3885.V7BX57"/>
    <dbReference type="Gramene" id="ESW22601">
        <property type="protein sequence ID" value="ESW22601"/>
        <property type="gene ID" value="PHAVU_005G166300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22602">
        <property type="protein sequence ID" value="ESW22602"/>
        <property type="gene ID" value="PHAVU_005G166300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSFP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMATRHE"/>
    <dbReference type="OrthoDB" id="118550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009723">
        <property type="term" value="P:response to ethylene"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009739">
        <property type="term" value="P:response to gibberellin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000009">
        <property type="entry name" value="transcription factor MYB1R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052245">
        <property type="entry name" value="Plant_Stress_Dev_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44191:SF4">
        <property type="entry name" value="OS01G0187900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44191">
        <property type="entry name" value="TRANSCRIPTION FACTOR KUA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="104"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="104"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="8">
        <location>
            <begin position="112"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="53"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="173"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="332"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="7"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW22602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="355" mass="38644" checksum="21F1EFC18FD4E4C5" modified="2014-02-19" version="1">MTRRCSHCSNNGHNSRTCPSSRGAAAGVKLFGVRLTDGSIIKKSASMGNLNLASSAHHHSSPSSSNLAASSPNPTSPCSDLLHEPHGYLSDDPAHISTLANRRGERKKGVAWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDMTSDPPSVPEEQVLLPPSEKPQPCNGKLQPSLNLSLKSEFEPMETTSQENMDQANETMMGSNGLTSMAPHGFFPTYLPVPYPIWPSTAAPFEEVKGGETSHHQVHRPIPVIPKEPVNVDELVGMSHLSIGETQVRDREPSPLSLNLLGEPSRQSAFHANAPVGGTDLKTGKNKAIQAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY86</accession>
    <name>V7BY86_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G120500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY86"/>
    <dbReference type="SMR" id="V7BY86"/>
    <dbReference type="STRING" id="3885.V7BY86"/>
    <dbReference type="Gramene" id="ESW22028">
        <property type="protein sequence ID" value="ESW22028"/>
        <property type="gene ID" value="PHAVU_005G120500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTIRLCI"/>
    <dbReference type="OrthoDB" id="1731741at2759"/>
    <dbReference type="PhylomeDB" id="V7BY86"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002152">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000090">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF452">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="144"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="175"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="210"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="316" mass="35240" checksum="BF0DB0F2436605D5" modified="2014-02-19" version="1">MVAKRGELVPFYATLLDACSSAKHLKNLKRIHALTITLGISRNDFIRSKLVSSYACCAQLHEANILFSFTIRQPTFLFNSLIRAHSSLSLFSQSLSIFRHMIVAHKPFDRHTLPVVLKSCAGLSALWLGQQVHGAVLVNGFALDLANSNALVNMYAKCGQLVSARQVFDRMCQRNEITFSTMMMGYGMHGKCAEVFELFDKLVEAGERPDGVTFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPEVQHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDEALWGALLAACKIHGKVEVAERVAERVYGRELTVASSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ65</accession>
    <name>V7BZ65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ethylene insensitive 3-like DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G150100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EIN3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ65"/>
    <dbReference type="SMR" id="V7BZ65"/>
    <dbReference type="STRING" id="3885.V7BZ65"/>
    <dbReference type="Gramene" id="ESW22393">
        <property type="protein sequence ID" value="ESW22393"/>
        <property type="gene ID" value="PHAVU_005G150100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AMIPVEE"/>
    <dbReference type="OrthoDB" id="2017676at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3180.10:FF:000001">
        <property type="entry name" value="Ethylene insensitive 3-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3180.10:FF:000002">
        <property type="entry name" value="Ethylene insensitive 3-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3180.10">
        <property type="entry name" value="DNA-binding domain of EIN3-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006957">
        <property type="entry name" value="EIN3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047091">
        <property type="entry name" value="EIN3-like_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023278">
        <property type="entry name" value="Ethylene_insens-like_DNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33305">
        <property type="entry name" value="ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33305:SF30">
        <property type="entry name" value="ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04873">
        <property type="entry name" value="EIN3_DNA-bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116768">
        <property type="entry name" value="DNA-binding domain of EIN3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ethylene insensitive 3-like DNA-binding" evidence="7">
        <location>
            <begin position="38"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="289"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="290"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="592" mass="66533" checksum="31F1CAE47922AD77" modified="2014-02-19" version="1">MADMEEIGPDVCSDLEVDDIRCPNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLAVLSREEALIRQPSSDNGTSGITGMLPGVPAENKQAASSASNYDVDGTDDGIGSVSSKADRRIQSMDTEPSDNLHRVTKSVQDKDQPKRPRPKKPRLNSRAVDKPPAQSDNEILHVEPRGKGLNINQTEAQAVRIQIHGNEQSNETDSAARPLEKELEVPTQLLAPEFDHYSYLHTNNLISSESIYTSGRPIQYPELQNPDMHHETTYNLYNPAAGHEPGHYRQQLHPGNSSEARPDIDAVHAQAVHMKGDEITGGDLQYFGKDAFQNELDRPIDHSFFGSPLSSMSLDFGGLNSPFHLDDFLGDDEMIQYFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZH8</accession>
    <name>V7BZH8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Hexosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G034200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1 5">Glycan metabolism; pectin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Golgi apparatus membrane</location>
            <topology evidence="5">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glycosyltransferase 8 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZH8"/>
    <dbReference type="SMR" id="V7BZH8"/>
    <dbReference type="STRING" id="3885.V7BZH8"/>
    <dbReference type="Gramene" id="ESW23289">
        <property type="protein sequence ID" value="ESW23289"/>
        <property type="gene ID" value="PHAVU_004G034200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQKV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="411524at2759"/>
    <dbReference type="PhylomeDB" id="V7BZH8"/>
    <dbReference type="UniPathway" id="UPA00845"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047262">
        <property type="term" value="F:polygalacturonate 4-alpha-galacturonosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045489">
        <property type="term" value="P:pectin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029993">
        <property type="entry name" value="GAUT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32116">
        <property type="entry name" value="GALACTURONOSYLTRANSFERASE 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32116:SF109">
        <property type="entry name" value="HEXOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="61320" checksum="CD2790E49E95A2FE" modified="2014-02-19" version="1">MQLHFSPSMRSITILSNNGIIDLMKIKVAACHISYRTLFHTILILAFLLPFVFILTALVTLEGANKCSSFDCLGRRLGPRLLGRVDDSSKILVRDFYKILNEVKTGEVPPALDMPDSFEQLVTDMKSNQYDAKTFAFMLRGMMEKFERDTREAKFAELMNKHFAASSVPKGIHCLTLRLTDEYSSNALARKQLPPPELLPTLSDNSYHHFIVSTDNILAASVVVSSTVQSSNTPDKIVFHVITDKKTYAGMHSWFALNPVTPAIVEVRGIHQFDWLTRENVPVLEAIENQNGIRNYYHGSNFARNNLSDTNPQKYASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFMDDDVVVQHDLSLLWEINLNGKVNGAVETCRGDDEWVMSKHFKNYFNFSHPLVAQHLDPDECAWAYGMNVFDLRAWRSTNIRETYHTWLKENLRSNLTMWKLGTLPPALIAFRGHVHPIDHTWHMLGLGYQNKTDIESLNKAAVIHYNGQSKPWLQIGFEHLRPFWTKYVNYSNYFVRNCHILDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0G8</accession>
    <name>V7C0G8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">60S ribosomal protein L36</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G065100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL36 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0G8"/>
    <dbReference type="SMR" id="V7C0G8"/>
    <dbReference type="STRING" id="3885.V7C0G8"/>
    <dbReference type="Gramene" id="ESW23647">
        <property type="protein sequence ID" value="ESW23647"/>
        <property type="gene ID" value="PHAVU_004G065100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3452">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NKGHKTE"/>
    <dbReference type="OrthoDB" id="25649at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.1760:FF:000001">
        <property type="entry name" value="60S ribosomal protein L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1760">
        <property type="entry name" value="60S ribosomal protein L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000509">
        <property type="entry name" value="Ribosomal_eL36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038097">
        <property type="entry name" value="Ribosomal_eL36_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10114">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01158">
        <property type="entry name" value="Ribosomal_L36e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01190">
        <property type="entry name" value="RIBOSOMAL_L36E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="79"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="21"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="79"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="110" mass="12394" checksum="1C6A1E0E832A795F" modified="2014-02-19" version="1">MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C209</accession>
    <name>V7C209_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G106800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParA family. MinD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C209"/>
    <dbReference type="STRING" id="3885.V7C209"/>
    <dbReference type="Gramene" id="ESW24154">
        <property type="protein sequence ID" value="ESW24154"/>
        <property type="gene ID" value="PHAVU_004G106800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CESAKAY"/>
    <dbReference type="OrthoDB" id="189057at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009898">
        <property type="term" value="C:cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051782">
        <property type="term" value="P:negative regulation of cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02036">
        <property type="entry name" value="MinD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000068">
        <property type="entry name" value="Site-determining protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010223">
        <property type="entry name" value="MinD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050625">
        <property type="entry name" value="ParA/MinD_ATPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01968">
        <property type="entry name" value="minD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43384:SF6">
        <property type="entry name" value="SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43384">
        <property type="entry name" value="SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobQ/CobB/MinD/ParA nucleotide binding" evidence="4">
        <location>
            <begin position="120"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW24154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="383" mass="42140" checksum="72BF6502B2C657C7" modified="2014-02-19" version="1">MHVLGLLHFKKLSKLKKAKIERKLTPKAQPLPRLPFLTSQCSFPSLTCCDSLHRNILFFFFFFSFFPMPPLHIIPAATSFPNPLLRHPSKTLTPKPRPLSALLQWNRKPELSGSTPRVTVITSGKGGVGKTTTTANIGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVIEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWLVDALKARPGGSPDFILIDCPAGIDAGFITAITPANEAVLITTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRTDMIKGEDMMSVLDVQEMLGLPLLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMQAVVVEEQPKRGFFSFFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2D2</accession>
    <name>V7C2D2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2 NT-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G055300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2D2"/>
    <dbReference type="SMR" id="V7C2D2"/>
    <dbReference type="STRING" id="3885.V7C2D2"/>
    <dbReference type="Gramene" id="ESW23532">
        <property type="protein sequence ID" value="ESW23532"/>
        <property type="gene ID" value="PHAVU_004G055300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW23533">
        <property type="protein sequence ID" value="ESW23533"/>
        <property type="gene ID" value="PHAVU_004G055300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW23534">
        <property type="protein sequence ID" value="ESW23534"/>
        <property type="gene ID" value="PHAVU_004G055300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQNG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNEVCPM"/>
    <dbReference type="OrthoDB" id="20172at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005643">
        <property type="term" value="C:nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019448">
        <property type="entry name" value="NT-C2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021827">
        <property type="entry name" value="Nup186/Nup192/Nup205"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31344:SF15">
        <property type="entry name" value="EEIG1_EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31344">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10358">
        <property type="entry name" value="NT-C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51840">
        <property type="entry name" value="C2_NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2 NT-type" evidence="2">
        <location>
            <begin position="7"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="463"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="606"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="479"/>
            <end position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1030" mass="114562" checksum="3055831F2A8AF727" modified="2014-02-19" version="1">MVLGMRGKNRRGFTVQIDFLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTALAAPSLGSVIGEGRIEFNESFRLHVTLLRDMSVRSGDTDVFQKNCLEFNLYEPRRDRTIKGQLLGTAIIDLAEYGTLKESLITSVPMNCKRSYRNTEQPLLFLKIQPLERNRASSSSKENNGGESVSTLMNEEYAEEAEITSFTDDDVSSHSSTAAASPSLDSRGFTLLKLIKNEATRNTGVNAMEHTFASETRFGNMNMMQQDTHQKLERSSYMSSLDVSSITRSNTRSSGHETLDQSFQEKLANYRNIVADVKRNTNGSTFGIYSKQTSSQDRAQFTGKNPGFENCDATEYDDKLNGRSTEADKYSMKESGGDKVRHDSVEDMSGNENYALDSQNCIKDEILEAQDGKDQASMDSNTYSFGGSNIAMQENILKSERLKNIKSVRIPADIARNTGSLGSNHQVELNENGILGHSKNSGGNRSNERRDSKIHTKEARNGTSDGKVEQLEKKIKMLEGELREAAAVESALYSVVSEHGNSTSKVHAPARRLSRLYLHACKEKFQGRRAGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTVALRTIISRTVKDPSNPAGSGRRRKTEEEGHGKITASLRVNGLHPRKNENTALGYGGFGNWDDPQVLISALEKVEAWIFTRIIESIWWQILIPHMQHTKFNSKEVVSDSRKSYRRTSSSCDQEQGNLSLYIWKNAFREACERICPIRAGGNECGCLPMLSRLIMEQCVARLDVAMFNAILRESYDEIPTDPVSDAVSDPKVLPIPPAKISFGAGAQLKTVIGTWSRWLSDLCGMDDDDSIEDKAETDNNEQRQTASLKPFSLLNALSDLLMLPKDMLLTASIRNEVCPMLNATLIKKILHNFVPDELCSDPVPSGVFEALDSENDMEDGKELVNNFPCIAAPIVYSPPTPSSIAIIVGEMGSKYHHLRRNRSSIVRKSHTSDDELDELKSPLSSIFLTSSSSQKVSTKSTFNFKELTNQSPVRYELLRDVWINSEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4D4</accession>
    <name>V7C4D4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G072700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4D4"/>
    <dbReference type="STRING" id="3885.V7C4D4"/>
    <dbReference type="Gramene" id="ESW23756">
        <property type="protein sequence ID" value="ESW23756"/>
        <property type="gene ID" value="PHAVU_004G072700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLREHSA"/>
    <dbReference type="OrthoDB" id="5792673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050973">
        <property type="entry name" value="H3K9_Histone-Lys_N-MTase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46223:SF3">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SET-23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46223">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SET" evidence="8">
        <location>
            <begin position="17"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="9">
        <location>
            <begin position="116"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW23756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="136" mass="15027" checksum="E3600BFAAEE04E0F" modified="2014-02-19" version="1">MVSCVIKGELLTTKEAQRRHQYYDELALQGRFSSALLVVREHLPSGKACLRLNIDATRIGNIARFVNHSCDGGNLSTKLVRSSGALFPRLCFFASKDIPVDEELTFSYGEIRKRSKGLPCFCNSPSCVGTLPSEDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C797</accession>
    <name>V7C797_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CRAL-TRIO domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G087800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C797"/>
    <dbReference type="SMR" id="V7C797"/>
    <dbReference type="STRING" id="3885.V7C797"/>
    <dbReference type="Gramene" id="ESW26057">
        <property type="protein sequence ID" value="ESW26057"/>
        <property type="gene ID" value="PHAVU_003G087800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1471">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCKAKTM"/>
    <dbReference type="OrthoDB" id="1434354at2759"/>
    <dbReference type="PhylomeDB" id="V7C797"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd00170">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.525.10">
        <property type="entry name" value="CRAL-TRIO lipid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001251">
        <property type="entry name" value="CRAL-TRIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036865">
        <property type="entry name" value="CRAL-TRIO_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011074">
        <property type="entry name" value="CRAL/TRIO_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036273">
        <property type="entry name" value="CRAL/TRIO_N_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46226">
        <property type="entry name" value="CRAL-TRIO DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46226:SF6">
        <property type="entry name" value="SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00650">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03765">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01100">
        <property type="entry name" value="CRAL_TRIO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00516">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52087">
        <property type="entry name" value="CRAL/TRIO domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46938">
        <property type="entry name" value="CRAL/TRIO N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50191">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CRAL-TRIO" evidence="1">
        <location>
            <begin position="82"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="37030" checksum="2617886C23F10AFF" modified="2014-02-19" version="1">MGVGSQDAIKQFQAFIDQVEEPLRRTFQNVHQGYVTETLMRFLKARDWDPSKAYKMLVDCLNWRVQNEIDHILSKPIVPADLYTAVRDSQLIGLSGYSKEGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRIILPSASKKHKRTITTCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIANAPYIFSACWKVVKPLLQERTRRKIQVLPGCGRDELLNVMDYSSLPHFCKREGSGSSKHSETGSENCYSLDHPFHQELYNHIKQQARQRETVEPIKHGSFHVDFPEPPDDESEIAKTIESELHKFENGNGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7B4</accession>
    <name>V7C7B4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PPPDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G010300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DeSI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7B4"/>
    <dbReference type="SMR" id="V7C7B4"/>
    <dbReference type="STRING" id="3885.V7C7B4"/>
    <dbReference type="MEROPS" id="C97.A09"/>
    <dbReference type="Gramene" id="ESW25135">
        <property type="protein sequence ID" value="ESW25135"/>
        <property type="gene ID" value="PHAVU_003G010300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0324">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DGWHSIM"/>
    <dbReference type="OrthoDB" id="412286at2759"/>
    <dbReference type="PhylomeDB" id="V7C7B4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101005">
        <property type="term" value="F:deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.30">
        <property type="entry name" value="PPPDE domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008580">
        <property type="entry name" value="PPPDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042266">
        <property type="entry name" value="PPPDE_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378">
        <property type="entry name" value="DESUMOYLATING ISOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378:SF83">
        <property type="entry name" value="PPPDE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05903">
        <property type="entry name" value="Peptidase_C97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01179">
        <property type="entry name" value="DUF862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51858">
        <property type="entry name" value="PPPDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPPDE" evidence="4">
        <location>
            <begin position="41"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW25135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="28313" checksum="27BEC6D098283207" modified="2014-02-19" version="1">MKSGFKNGWPSVVRLRLRDKSVTPFCIFSKVKSAGNIPGNTPVYLNVYDLTTVNGYMYWAGLGIFHSGVEVYGVEYAFGAHDYSTSGVFEVEPRQCPGFKFRKSIFMGTTSLDPFQIREFMECQSANYNGDAYHLIVKNCNHFCGDICYKLTGNSIPKWVNRLARIGSFCNCILPDALKTSTVQHDPNFQACDSEKRRLRTAFSCLSSISMPQKEVSMSSLFMHSHYKGCLPPWELKKSKKGRLKQKLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7K3</accession>
    <name>V7C7K3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_003G019100g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7K3"/>
    <dbReference type="Gramene" id="ESW25240">
        <property type="protein sequence ID" value="ESW25240"/>
        <property type="gene ID" value="PHAVU_003G019100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WICGYAI"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000325">
        <property type="term" value="C:plant-type vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd16454">
        <property type="entry name" value="RING-H2_PA-TM-RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000391">
        <property type="entry name" value="E3 ubiquitin protein ligase RIE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45977:SF11">
        <property type="entry name" value="E3 UBIQUITIN PROTEIN LIGASE RIE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45977">
        <property type="entry name" value="TARGET OF ERK KINASE MPK-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="189"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="15">
        <location>
            <begin position="291"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="109"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="113"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="13">
        <location>
            <begin position="128"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW25240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="37465" checksum="8B8463B4719720EE" modified="2014-02-19" version="1">MSSQTAAAEAPLLRNRQDAARAPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSVVMLACTTGERPNSPIRVWIVGYGCKYRRRSRRDSRRGQGARDLESQAGSDNDDGGNDSDSDDGDGSSGNSSRSRFTKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILQKYRFRIPSNEDKSSGGGGSMVPIETSSAYLATERILLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7U7</accession>
    <name>V7C7U7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G177800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7U7"/>
    <dbReference type="STRING" id="3885.V7C7U7"/>
    <dbReference type="Gramene" id="ESW24991">
        <property type="protein sequence ID" value="ESW24991"/>
        <property type="gene ID" value="PHAVU_004G177800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUM2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPMMMFG"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01989">
        <property type="entry name" value="USP_STK_Ubox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000498">
        <property type="entry name" value="U-box domain-containing protein 51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051348">
        <property type="entry name" value="U-box_ubiquitin_ligases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647:SF36">
        <property type="entry name" value="ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647">
        <property type="entry name" value="OS02G0152300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="461"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="191"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="320"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="756"/>
            <end position="788"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="191"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="219"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="325"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW24991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="788" mass="87596" checksum="92024CC843B4F449" modified="2014-02-19" version="1">MKPQCCFSNLTSYQFSETSFLEKSKMSRMNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRSSSGNSANELVGDNESKELFESFRVFCNRKSIQCREMLLEDVDIAKALGESIVMNSIELLVLGAPSRGGLVRRFRTTDIPSTVSKAAPPFCTVYIISKGKISSVKTATAPLAPKPAAARNPLQPQQQPQPQPQPRHQSLMRSPERLLEAHPTRSTYPPRPSFGSGTRQMALDDDDIISPFTRAGRTYESSKLPDSDISFVSSGRPSIDRIFPTMYDDLDSASSGMATGRYSCVSDSDARSFASSLSSQGYNSNDDYSFTSSQPRLSDCTDDVEMEMRRLKLELKQTMDMYNSACKEAMSAKQRAMEVQRWKAEEQKKLEDSQTGDASTTRLMEMEQNRIREEIAALEAQKRMSHVERKKPSEGFGTAMYRRYSIEEIEKATNMFSDSVKIGEGGYGPVYRGELDCTQVAIKVLKPDADQGREQFQQEVEVLSCIRHPNMVLLVGACPEYGCLVYEYMANGSLDDCLFRKGSSRPALPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRAIEKGNFAEMLDPAVEDWPVEHAMHFAKLCLGCAEMRRKDRPDLGKVVLPELNKLRIFAEESMSPMMMFGLRSGGGAGYLPRTSNSSSTFSETSETLSGFSGYESRSSSSSVGRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8V0</accession>
    <name>V7C8V0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G130800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8V0"/>
    <dbReference type="SMR" id="V7C8V0"/>
    <dbReference type="STRING" id="3885.V7C8V0"/>
    <dbReference type="Gramene" id="ESW26574">
        <property type="protein sequence ID" value="ESW26574"/>
        <property type="gene ID" value="PHAVU_003G130800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW2W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPVYEWE"/>
    <dbReference type="OrthoDB" id="1882251at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33527">
        <property type="entry name" value="OS07G0274300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33527:SF14">
        <property type="entry name" value="OS07G0274300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="173"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="35563" checksum="52472F2AE6A4F361" modified="2014-02-19" version="1">MDLESSSFFVTQEEFNLFHRIDRQLYKILVMILFREPGECMQVHALWLWLERVGFRNVVKRVLALPNILINEVADETVLCLNCINNSSFTAPPSSFENSEIPLLQSLVDKEISLQFLYENRISALQGVAKVMQDVCVRAFTDIMQQAIIRNSNDRVVEAQKVVMKPSSEKENQNQNQNQNQNPLWFGSIGPSNSRVEVPADDRTLFVTFSKGYRVEEWEVREFFTIAYGDCIEALYMQEVQSNEQALFARIVFRIASTIDMILRGAIKAKFTINGKHVWARKFVPKRIATRSMLTTINNFSGETSITRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9B9</accession>
    <name>V7C9B9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G147100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9B9"/>
    <dbReference type="STRING" id="3885.V7C9B9"/>
    <dbReference type="Gramene" id="ESW26772">
        <property type="protein sequence ID" value="ESW26772"/>
        <property type="gene ID" value="PHAVU_003G147100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S25C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YTSEHVQ"/>
    <dbReference type="OrthoDB" id="1933825at2759"/>
    <dbReference type="PhylomeDB" id="V7C9B9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:001366">
        <property type="entry name" value="Zinc finger protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044246">
        <property type="entry name" value="ZFP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287:SF15">
        <property type="entry name" value="ZINC FINGER PROTEIN 3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="47"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="18207" checksum="209EBD6FA0E59B93" modified="2014-02-19" version="1">MNFHPNTSLHLRQPDEINHLNLDLLLEPSSSSSSSPSPISPIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSTMQSYGTQEQRSNFSPSHHLGRALGVNVVDDQGQSYVRLGGRKEYSFGPKEGMASWSRGYTSEHVQEDIGQLDLSLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA03</accession>
    <name>V7CA03_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G060800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA03"/>
    <dbReference type="STRING" id="3885.V7CA03"/>
    <dbReference type="Gramene" id="ESW25731">
        <property type="protein sequence ID" value="ESW25731"/>
        <property type="gene ID" value="PHAVU_003G060800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXGK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLPYRQN"/>
    <dbReference type="OrthoDB" id="1426886at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012442">
        <property type="entry name" value="DUF1645_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33095:SF114">
        <property type="entry name" value="DUF1645 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33095">
        <property type="entry name" value="OS07G0619500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07816">
        <property type="entry name" value="DUF1645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="29335" checksum="EC9EF7C8E0C68E45" modified="2014-02-19" version="1">MQVLSVLRLSHSLPKSNDFVPIPPILDPYSTSENQIHFENEESFEEEEFSFAPFDDQIALPFSDEIFENGMIRTASTNFEQCIVSPIVHDNNTFSLQPPLRRLFVVQQLDKSCTQSKEMLKGSCSDVSQNHVVVEIEASNKKCKKSKSTGFSKTWRLRESFRLRSNSDGKDTFVHFNPSRVMPLRSTKTNKDNAVTKKGKTSKCKTTFSPHEKVYIMNKRRNETTRRKTFLPYRQNLIGFFVNMNGFSRNINPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCR6</accession>
    <name>V7CCR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">S-acyltransferase</fullName>
            <ecNumber evidence="16">2.3.1.225</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">Palmitoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_003G172300g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14 16">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="16">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 16">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="16"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCR6"/>
    <dbReference type="SMR" id="V7CCR6"/>
    <dbReference type="STRING" id="3885.V7CCR6"/>
    <dbReference type="Gramene" id="ESW27085">
        <property type="protein sequence ID" value="ESW27085"/>
        <property type="gene ID" value="PHAVU_003G172300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0509">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMWISWI"/>
    <dbReference type="OrthoDB" id="331948at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019706">
        <property type="term" value="F:protein-cysteine S-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.20:FF:000300">
        <property type="entry name" value="S-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.20:FF:000334">
        <property type="entry name" value="S-acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24161">
        <property type="entry name" value="ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24161:SF17">
        <property type="entry name" value="PALMITOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10 15" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="9" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="13" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0564">Palmitate</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 16" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="275"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="305"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="416"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="459"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="15">
        <location>
            <begin position="64"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="15">
        <location>
            <begin position="97"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="15">
        <location>
            <begin position="164"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="15">
        <location>
            <begin position="197"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="18">
        <location>
            <begin position="371"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="584"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="584"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="17">
        <location>
            <begin position="594"/>
            <end position="610"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW27085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="635" mass="69644" checksum="A254EBB7244CF1F5" modified="2014-02-19" version="1">MSSEIEVVEEVSRDEQSPAAGVGDGVPEESLRNDVYTAAAYGDLEKLQRLVEQEGCPVTEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNATDHTGQTALHWCAVRGAIQAAELLLQEGARVSAADMNGYQTTHVAAQYGQTSFLYHVVSKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAHRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKDDLMVADNTGLTPAQLASDKNHRQVAFFLGNARRLLDKRCDGNSRLGRISKLGLAPILWCIIFVLLVTYIHSVILATKMPRLTAAAGLLAWFGVLLATVGLVMFYKCSCKDPGYIRMNMHDTHETKDDEPLLKIEINNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFAFLILEVSAMLVTGGVCLTRVLTDPLAPHSFGAWIQYVGKNHTGAISFLIADFFLFFGVFALTVVQASQISRNITTNEMANAMRYSYLRGSGGRFRNPYDHGIKKNCSDFLINGYNEDVECIEELGRTEEGVGMMNIGRSSNLANGDSHTRGEYARGHGNGQYVINVNSNSTNSKTHNGHVHSSHCSHNNHGKTRNDSAPLGLGLGLGRNSRSVTSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD34</accession>
    <name>V7CD34_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">B box-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G260100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD34"/>
    <dbReference type="SMR" id="V7CD34"/>
    <dbReference type="Gramene" id="ESW28112">
        <property type="protein sequence ID" value="ESW28112"/>
        <property type="gene ID" value="PHAVU_003G260100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRS5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NADEHAM"/>
    <dbReference type="OrthoDB" id="153872at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010100">
        <property type="term" value="P:negative regulation of photomorphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009640">
        <property type="term" value="P:photomorphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd19821">
        <property type="entry name" value="Bbox1_BBX-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:000610">
        <property type="entry name" value="B-box zinc finger protein 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051979">
        <property type="entry name" value="B-box_zinc_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049808">
        <property type="entry name" value="CONSTANS-like_Bbox1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000315">
        <property type="entry name" value="Znf_B-box"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31832">
        <property type="entry name" value="B-BOX ZINC FINGER PROTEIN 22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31832:SF5">
        <property type="entry name" value="OS09G0527900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00643">
        <property type="entry name" value="zf-B_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00336">
        <property type="entry name" value="BBOX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57845">
        <property type="entry name" value="B-box zinc-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50119">
        <property type="entry name" value="ZF_BBOX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="B box-type" evidence="12">
        <location>
            <begin position="10"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="B box-type" evidence="12">
        <location>
            <begin position="61"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="113"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW28112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="21492" checksum="D26B94326D98C228" modified="2014-02-19" version="1">MQNNTPSTSIMRTLCDACESAAAIVFCAADEAALCRACDKKVHMCNKLASRHARVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHERYLLFRQRVEFPGDKPGKSENPASQPLDPGETKRGQNALPKIKMGEKQQNYRMPLILTPEPNADEHAMMGTKMIDLNMKPQRIHEPASNNQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDF1</accession>
    <name>V7CDF1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G191200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="6">Binds to the translation initiation factors TIF3E1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDF1"/>
    <dbReference type="SMR" id="V7CDF1"/>
    <dbReference type="STRING" id="3885.V7CDF1"/>
    <dbReference type="Gramene" id="ESW27315">
        <property type="protein sequence ID" value="ESW27315"/>
        <property type="gene ID" value="PHAVU_003G191200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3301">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RQFITHG"/>
    <dbReference type="OrthoDB" id="1543448at2759"/>
    <dbReference type="PhylomeDB" id="V7CDF1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.290.10:FF:000021">
        <property type="entry name" value="40S ribosomal protein S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="entry name" value="RNA-binding S4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_uS4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018079">
        <property type="entry name" value="Ribosomal_uS4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005710">
        <property type="entry name" value="Ribosomal_uS4_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_uS4_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003139">
        <property type="entry name" value="PRK04051.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01018">
        <property type="entry name" value="uS4_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="30S 40S RIBOSOMAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831:SF47">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US4Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00163">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55174">
        <property type="entry name" value="Alpha-L RNA-binding motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00632">
        <property type="entry name" value="RIBOSOMAL_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS4 N-terminal" evidence="11">
        <location>
            <begin position="8"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="RNA-binding S4" evidence="10">
        <location>
            <begin position="109"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="162"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="172"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00064713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW27315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="197" mass="23039" checksum="5135E26593014116" modified="2014-02-19" version="1">MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARNLLTLDEKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQKAAAKKAAGGDGDEEDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE05</accession>
    <name>V7CE05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G280100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Endomembrane system</location>
            <topology evidence="9">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Membrane</location>
            <topology evidence="10">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE05"/>
    <dbReference type="STRING" id="3885.V7CE05"/>
    <dbReference type="Gramene" id="ESW28359">
        <property type="protein sequence ID" value="ESW28359"/>
        <property type="gene ID" value="PHAVU_003G280100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28360">
        <property type="protein sequence ID" value="ESW28360"/>
        <property type="gene ID" value="PHAVU_003G280100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQA9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGCRKEE"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000076">
        <property type="entry name" value="probable methyltransferase PMT21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108:SF1084">
        <property type="entry name" value="METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00060399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW28359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="598" mass="68805" checksum="4FE65B2D4A4A190D" modified="2014-02-19" version="1">MNNKDGKPLTQPDKSRIVPMAIIFVVLCGFSFYMGIIFCSEKDSFDSIYSQKSIEFPKESSTSSLQIKYTSFPECSADYQDYTPCTDPRRWRKFGSYRLTLLERHCPPKFERKECLVPPPDGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLKKEGEKFIFPGGGTMFPNGVGKYVDLMQDLIPEMKDGTIRTAIDTGCGVASWGGDLLDRGILTLSLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGVYLLEIHRILRPGGFWVLSGPPINYERRWRGWNTTIEEQRSDYEKLQELLTSLCFTMYKKKGDIAVWRKSPDNNCYNELARDTFPPKCDDSLEPDSAWYTPLRACVVVPDPKFKKSGLSSISKWPERLHVTPERISLVYHGSDSTLKHDDSEWKKHVGYYKKLIPELGTDKIRNVMDMNTVYGGFAAALIDDPVWVMNVVSSYASNSLPVVFDRGLIGTIHDWCEAFSTYPRTYDLLHLDGLFTAESHRCEMKNVLLEMDRILRPWGYAIFRESSYFTNAIATLGKGMRWECRKEDTESGSDTQKVLVCQKKLWYSSKQGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEQ9</accession>
    <name>V7CEQ9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G005500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEQ9"/>
    <dbReference type="SMR" id="V7CEQ9"/>
    <dbReference type="STRING" id="3885.V7CEQ9"/>
    <dbReference type="Gramene" id="ESW28642">
        <property type="protein sequence ID" value="ESW28642"/>
        <property type="gene ID" value="PHAVU_002G005500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWG8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGGFEQW"/>
    <dbReference type="OrthoDB" id="693868at2759"/>
    <dbReference type="PhylomeDB" id="V7CEQ9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34285">
        <property type="entry name" value="OS08G0510800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34285:SF6">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="291"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="299"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="351" mass="39067" checksum="E831B9D19E20AFC8" modified="2014-02-19" version="1">MKLSLKFQGDENHEQHSAQIMTAKVPITILNKPFLSAVTATTATNSVSEFSFALSSNFTSGPSLRVSYTPTASQPFTLSLKSGLGLFGSPLHSPLVFSANFSLSPTPTPFFSLQFKPQFGHFSLHKTVFSDTPPPPSPLPPTPQIVSNESSSGWQNLKLEPCGDRDQSHPNVLENSKNDAKHALSPAVRVMAQTLVPVTKGFFLNFRWGVNFPRNFGSKMPSLTVNKIRLERVEDEKESSNSNSQKKRVGSEIDLKEMCFWMGRDLENVERENREMKRLLDEMKMGISTARKEMVLQPNKVSETSSGELQRRRSYKSGRQEDEKKVQPNKSQSVATDVESELQKAIKAATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI15</accession>
    <name>V7CI15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Autophagy-related protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G295800g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a 1,2-diacyl-sn-glycero-3-phospho-L-serine(in) = a 1,2-diacyl-sn-glycero-3-phospho-L-serine(out)</text>
            <dbReference type="Rhea" id="RHEA:38663"/>
            <dbReference type="ChEBI" id="CHEBI:57262"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>a 1,2-diacyl-sn-glycero-3-phosphoethanolamine(in) = a 1,2-diacyl-sn-glycero-3-phosphoethanolamine(out)</text>
            <dbReference type="Rhea" id="RHEA:38895"/>
            <dbReference type="ChEBI" id="CHEBI:64612"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Preautophagosomal structure membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ATG2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7CI15"/>
    <dbReference type="Gramene" id="ESW28546">
        <property type="protein sequence ID" value="ESW28546"/>
        <property type="gene ID" value="PHAVU_003G295800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2993">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEECKSD"/>
    <dbReference type="OrthoDB" id="18982at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061908">
        <property type="term" value="C:phagophore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034045">
        <property type="term" value="C:phagophore assembly site membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032266">
        <property type="term" value="F:phosphatidylinositol-3-phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043495">
        <property type="term" value="F:protein-membrane adaptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000045">
        <property type="term" value="P:autophagosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000422">
        <property type="term" value="P:autophagy of mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061723">
        <property type="term" value="P:glycophagy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034727">
        <property type="term" value="P:piecemeal microautophagy of the nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061709">
        <property type="term" value="P:reticulophagy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026849">
        <property type="entry name" value="ATG2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13190">
        <property type="entry name" value="AUTOPHAGY-RELATED 2, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13190:SF1">
        <property type="entry name" value="AUTOPHAGY-RELATED 2, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13329">
        <property type="entry name" value="ATG2_CAD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0072">Autophagy</keyword>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8" id="KW-0445">Lipid transport</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1977" mass="217500" checksum="08869A04104D7E9B" modified="2014-02-19" version="1">MFPWRNFAKSAEATFSRWALKRVCKFFLKKKLGQFILGDLDLDQLDVQLSQGTIQLSDLALNVDFVNAKFGKTSSIMIKEGSIGYLLIKMPWSGKGCEVEVNGLELVVSPCSDKVSTSEDVTCSMDNSDNHHHRYSSTMTEHEISDDAEKLASMDVHEGVKTIAKMIKWLLTSFHVTVKNVIVAFDPSLDKVENKTYRRHALVLQISEIQCGTSLSEDADLNVDVLGISQLTNFVKFHGAVIELLQIDNEDFYFQHESRAGCDEPVLGSNIETCPVLTGNKGGFSGSIKLSIPWKNGSLDICKVDADACVDPIVLRFQPSSIKWLLQSWETLKNLNKDGKGCTNHNIRGPAQLNSTLLRHSSTSVSITNAPSESITAGGSLSAEYASMIQPETLAEDLLPAANLISDWVPLSADTNHNKDGIQELDFGASVDQFFECFDGMRNSQSALGNSGMWNWTYSVFSAITAASSLASGSLHIPSEHQHMETNFRATFAGVSVVLSSCVDEQNTVSDTEIDHMAGLQIDYLGAECNDIVFALQVCPQGMTLDAKVRHVEVANFVNIGIDAKNQTALVQHLQAKVLDALPSSTSYNIDSHSLIGPVATDFPFGNNDCLLKVTLFRTSGVTNCQFSMQSISSDGCLTGKTSFSLNLPPFIFWVIFSVINVLMNLLKEVDKSLGMHNKENIILSEESDNKCGPSQSNMKEGSSPCVTSFSTTQCLHGDISISNARVILCFPFGRDEDYNNSFPWEQFFALDFTSLSPLNNGSTPDYSQSSNASSNKRFPSVSAQSLQLSFCDLDIYLITSSNENGGIISYDAQNEKFSASCFFSIFHRRGCFSVFRVVWQGGKVTGPWIAKKARLFANSEESRGKEDTGRRGHEFVSASTVKDLEDWKSQTQQEMILSSSFLIHVHLSQLVINVNYSQYKGIHDLLHQTLNALTCVTSKEANVEKESSVSQSSVFLECDSLEILIDRDTSERTKSSIKSELPGIWCQFRLKVQKFEVLSVTNTGGIKAASFFRLAHGEGKLWGFVTGLPDHEFLLITCSNSSVKRGDGGGSNALSSKCAGSEVICLSDPEISDTVTSITVSCGTIIAVGGRLDWFDAISSFFCLPASNTKGVGDTSISKKEHNVSYTTSFVLCLIDIALSYEPYVKNPVVQSELNSESSCSLNEDMSEQCVSCLLAASSLTLSNSSSEDTVGSVFQIRVHDLGLLLHLISELNSVSGIYSVEHLQKTGYVKVAQEAFMEAILKTNCTSSLLWELELSKSHLNVETCYDTTAGLIRLAAQLQQLFAPDVEESIVHLQNRWHNVQQAQQRNEFKIENKNLRFDSMSTISEQCSPPTFSTDGSSIAGWMDEICEDAFKVNNNNASQSYPFGSGIPLDGSLIEVGQMNFHKPEILSHELTLTEPVSVLGPEGSDTSFLQEGCFPEVIESYCLSDLCPLSELSLGIHCDELSRHKLRNVEHKEIERGSGRWYGGTSLKVLENHIAEESKQSELEKAVDHRGMLLSDDSSSHGETCGRVILKRIDIRWRMYGGSDWLDSEKSGQYSGRDTSICLELALSGIKFQYDIFPVGGLHVSKMHVSVQDFYLYDRSHDAPWKLVLGYYHSKGHPRESFSKAFKLDLDAVRPDPLTPLEEYRLNVAILPLLLHLHQCQLDFFVDFFGRKNTLKDQFSNSCQDFEGSKSLPEKTKKNKDCVFHSIAPEALLPYFQKLDIWPILVRVDYSPSRVDLAALRHGKYVELVNLVPWKGVELNLKHVHASGVYGWASVCEITAGDWLEDISQNQIHKILRGLPTVRSLIAVGAGAAKLVSSPVESYKKERRVLKGVQRGTIAFLRSISLEAVGLGVHLAAGAHDILLQAEYILSSIPSPVPLPVKDKSKTDVRSNQPKDAQEGIQQAYESLSDGLGKSAAVLVQSPLKKFQRGSGAGPALAAAVRAVPAAAIAPASACASAVHCALLGFRNSLDPERKKESMEKYCPAQPWEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIN3</accession>
    <name>V7CIN3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G051300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the SOFL plant protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIN3"/>
    <dbReference type="STRING" id="3885.V7CIN3"/>
    <dbReference type="Gramene" id="ESW29198">
        <property type="protein sequence ID" value="ESW29198"/>
        <property type="gene ID" value="PHAVU_002G051300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0VS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNQWFEG"/>
    <dbReference type="OrthoDB" id="759087at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009691">
        <property type="term" value="P:cytokinin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009736">
        <property type="term" value="P:cytokinin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044670">
        <property type="entry name" value="SOFL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33347:SF51">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33347">
        <property type="entry name" value="OSJNBA0091C07.3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0203">Cytokinin biosynthesis</keyword>
    <keyword evidence="4" id="KW-0932">Cytokinin signaling pathway</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="43"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="43"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW29198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="186" mass="20747" checksum="1AC19BB08F4675F2" modified="2014-02-19" version="1">MNALASQCSSGCESGWTLYLDHSFQLKNHNTFSHASSQLIGEDYKDKKAKKEEADEEDLSMVSDASSGPPHLPEAQDDASFYSASNSAKLGKRTRKRQKVKQYQHLPSFLDDTASSLVFDFSMNNVTVTNHQTSTESMLNCSQGFSATYFEERSSLQDHFGFLEPSLSENGVENNKWYGGKEMGMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJS6</accession>
    <name>V7CJS6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G084300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJS6"/>
    <dbReference type="Gramene" id="ESW29608">
        <property type="protein sequence ID" value="ESW29608"/>
        <property type="gene ID" value="PHAVU_002G084300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TGTHERF"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051787">
        <property type="term" value="F:misfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071629">
        <property type="term" value="P:cytoplasm protein quality control by the ubiquitin-proteasome system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051865">
        <property type="term" value="P:protein autoubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000209">
        <property type="term" value="P:protein polyubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061635">
        <property type="term" value="P:regulation of protein complex stability"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000127">
        <property type="entry name" value="E3 ubiquitin-protein ligase RNF181"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15710:SF132">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE MPSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15710">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE PRAJA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="115"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="167"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="35"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="167"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="202"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW29608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="222" mass="24408" checksum="F669B8340E1AB551" modified="2014-02-19" version="1">MACYLIGTHNTAQHNNPNKFQILPQHSVSHIKTTPGRDSDDLRHGNGNPEGSQRQRIILVNPFTQGMVVIDADSHLEALFRELGSGKGGRPPASKESILAMPSVEIREGCEDLECVVCLEEFGVGGVAKEMPCKHKFHGDCIEKWLGMHGSCPVCRYEMPVEKNWGKKSEEEGGERRRDGGGSGDEVWVSFSYNRIRRGQDNDQTASNDDSPSSLGDDAVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJX6</accession>
    <name>V7CJX6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Dof-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G084000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJX6"/>
    <dbReference type="STRING" id="3885.V7CJX6"/>
    <dbReference type="Gramene" id="ESW29605">
        <property type="protein sequence ID" value="ESW29605"/>
        <property type="gene ID" value="PHAVU_002G084000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSI8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYRQIMV"/>
    <dbReference type="OrthoDB" id="1927254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045174">
        <property type="entry name" value="Dof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003851">
        <property type="entry name" value="Znf_Dof"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31089">
        <property type="entry name" value="CYCLIC DOF FACTOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31089:SF69">
        <property type="entry name" value="DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02701">
        <property type="entry name" value="Zn_ribbon_Dof"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01361">
        <property type="entry name" value="ZF_DOF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50884">
        <property type="entry name" value="ZF_DOF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Dof-type" evidence="10">
        <location>
            <begin position="139"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="21"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="358"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="60"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="127"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="358"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="386"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW29605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="480" mass="52072" checksum="E0EB1037201BC401" modified="2014-02-19" version="1">MSGAVKDSAIKLFGRTISLSRHHQVSANGSSSEPAPPQDYSHHHSPPSSSSFPREVMSTTEREPERDKEPSGKELTSTQDDEALHEELKSPTSSCNLENPKTPSTEIETSLMKSPKKGDQTDTTSASEDKTPKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKHCQRYWTAGGTMRNVPVGAGRRKNKNTSSAASHYRQIMVPETLQNGSLHSAVLTFGSDFPLCDSMASVLSLAEKTQNGVLNGFHSPKHNVSTVNNNNSGDDINSVGASVMASTLCEKRDNATSSHDESVDKIYHQGFSPQLCLPGSSSSSSPWPYPWNPAMTPSAFYQPVSFYPTQAFWGCMPPPSWSVNYQSASSSGPNSPTLGKHSRDGDILLQKPGTESSSNMAENSNTVLIPKTLRIDDPTEAAKSSIWSTLGIKNEKGNSLNGGGLFKAFASKGGSDDKKNHVVVEASPVLQANPAALSRSLVFHERT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLC0</accession>
    <name>V7CLC0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G200400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLC0"/>
    <dbReference type="STRING" id="3885.V7CLC0"/>
    <dbReference type="Gramene" id="ESW31002">
        <property type="protein sequence ID" value="ESW31002"/>
        <property type="gene ID" value="PHAVU_002G200400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIAWQEE"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755848" description="FAD-binding PCMH-type domain-containing protein" evidence="7">
        <location>
            <begin position="26"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="8">
        <location>
            <begin position="73"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="538" mass="60728" checksum="F04ACE121A27DFDE" modified="2014-02-19" version="1">MKYLSSYFTFATAIALFFSFEPSSPDPHENFVPCLYNYPNITNSISNVVYIQTNSSYSSVLDLTIVNRRFSNSSTKPLVIVTPLDVSQILATIICSQRHGLQIRTRSGGHDYEGLSYVAGVPFVLLDLSNLRQIAVDEENRTAWVQSGATLGELYYRISQKSKSLGFPAGVCATVGIGGHISGGGYGLMMRKYGIAADNVIDAHIIDVNGNLLDRQAMGEDLFWAIRGGGGASFGVIVAWKVNLVPVPSTVTVFDVSRTLEENATEIIQKWQVVANKLDERIMIRVDIARVNSRQHGKVTIKARFVSLFLGGVEELIPLMQNSLPELGLDRKDCKETSWIGSAVFFNAVLIGTSGNEPPEVMLNRTQLHLWKYKGKSDYVTQPIPVEGLQGLWRLLYEAKVENAQLQFAPYGGRMYEISESEIPFSHRSQYIYHIHYNNKWQEEGDEIAEKHMNFVRRMYKYMEPYVSNSPRAAYINYRDLDIGVNNNGYTSYTQAKIWGLKYFNNNFKRLARVKTKVDPDNFFRNEQSIPTLSMEEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLK4</accession>
    <name>V7CLK4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cystic fibrosis transmembrane conductance regulator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G133800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLK4"/>
    <dbReference type="SMR" id="V7CLK4"/>
    <dbReference type="STRING" id="3885.V7CLK4"/>
    <dbReference type="Gramene" id="ESW30208">
        <property type="protein sequence ID" value="ESW30208"/>
        <property type="gene ID" value="PHAVU_002G133800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYIJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DGTIWKE"/>
    <dbReference type="OrthoDB" id="1909326at2759"/>
    <dbReference type="PhylomeDB" id="V7CLK4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34196">
        <property type="entry name" value="OS02G0697700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34196:SF2">
        <property type="entry name" value="OS02G0697700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="151" mass="16506" checksum="C2783F23A4FE6431" modified="2014-02-19" version="1">MVGIFSRFSVGRNVHRRTQSALDEREVMPSNSEAVAAVASAATTTSHGIEVAVEFKPVEHPIEPLDSDRPIQCPLPEPSILNDGRIWKERVSATVRRRGDLPVMKEGGTLESEDAGIKPRTSRSNRMILPSVSAPEHNLLKLLEECNASGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM11</accession>
    <name>V7CM11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G150600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM11"/>
    <dbReference type="STRING" id="3885.V7CM11"/>
    <dbReference type="Gramene" id="ESW30403">
        <property type="protein sequence ID" value="ESW30403"/>
        <property type="gene ID" value="PHAVU_002G150600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1550">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMLLADN"/>
    <dbReference type="OrthoDB" id="272077at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd09917">
        <property type="entry name" value="F-box_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053301">
        <property type="entry name" value="F-box_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45088:SF1">
        <property type="entry name" value="OS04G0476000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45088">
        <property type="entry name" value="OSJNBA0022H21.17 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="2">
        <location>
            <begin position="90"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="370" mass="41261" checksum="D8B425D635CACA95" modified="2014-02-19" version="1">MQNETREEGITDTLHPLILSHTHEHAHAHRLSDSPQQMKHRTWPRISSSPFSSLNFSNATAPRFSAEHSARSTRLCARPPPSSPGADFTALPYDVLVKISASFDHPNLRAASLVCRAWCEALRPLREAMVLLRWGKRFKHGRRGVRPNADKALESFLKAAARGSALAMVDAGLIYWERGEKPKAMELYLRAAELGNPSAQCNLGISYLQAEPPNNEQAFKWLYKSSLCGNVRAQYQLALWLHRGGGRVCSNMKEAAKWYMKAAEGGYVRAMYNISLCFSIGEGLSRNHQLARKWMKRAADRGHSKAQFEHGLALFSEGDMMKAVVYLELATRAGEKGAAHVKNAVLHRLSSASRDHAMHLADSWRALPSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM65</accession>
    <name>V7CM65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G145900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM65"/>
    <dbReference type="SMR" id="V7CM65"/>
    <dbReference type="Gramene" id="ESW30350">
        <property type="protein sequence ID" value="ESW30350"/>
        <property type="gene ID" value="PHAVU_002G145900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WALFCAP"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000040">
        <property type="entry name" value="UDP-glycosyltransferase 76C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1392">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="54475" checksum="7D074C791705E9AE" modified="2014-02-19" version="1">MAEEEEEAGVNHVVLLPGPLQGNVNSMMKLAQLLALHHFHVTFLTTDFIHRRLHRFADIQALSQTYPNLELKTISDGLPDDHPRSDNALADLYSFLNSHAKPLIRDILVSQTAAKPKVTCLIGDGFLGGLTADVADEVGIPLIHFRAISASCFWALFCAPNLFESNQLPIRGEEDMDRVITTLPGMENILRCRDLPSFYRGTESNLVEPLKSTVFDCHQTLRARGVILNTFEDLDGPLLSQMRLKFPRVFAVGPLHAHLNSERVFDAKPTPSMSSFWEVDRSCLTWLDSQPLKSVLYVSFGSITTITRERLMEFWYGLVNSKKRFLWVIRPDMVAGEDNNDRVPAELEEGTKERGFIVGWAPQEEVLEHKAIGGFLTHSGWNSTLESVVAGVPMICWPYFADQQINSRFVSEVWKVGLDMKDVCDRDVVEKMVNDLMVHRREEFLNSAKAMAKLAHKSVSPGGSSYSSLLDLIQYIKSTSRENN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPF1</accession>
    <name>V7CPF1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Terpene synthase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G219200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPF1"/>
    <dbReference type="SMR" id="V7CPF1"/>
    <dbReference type="Gramene" id="ESW31213">
        <property type="protein sequence ID" value="ESW31213"/>
        <property type="gene ID" value="PHAVU_002G219200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1877784at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010333">
        <property type="term" value="F:terpene synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.130">
        <property type="entry name" value="Terpene synthase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036965">
        <property type="entry name" value="Terpene_synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="133" mass="15398" checksum="6DBB6E25DF69E6F8" modified="2014-02-19" version="1">MALHFYSCIFSSKPRIVATKAQHSEYFNPAKVDSLHIANKWNIVQERSSAQVYKTGNLSMNLSEKVEVVRNEFWKSVDEKSLKDLYMIDVMQRLNIDYHFKEEIEALLGKQYVNCSNIIGSGYGTTLHFYSGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQW0</accession>
    <name>V7CQW0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G228300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutaredoxin family. CGFS subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQW0"/>
    <dbReference type="SMR" id="V7CQW0"/>
    <dbReference type="STRING" id="3885.V7CQW0"/>
    <dbReference type="Gramene" id="ESW31316">
        <property type="protein sequence ID" value="ESW31316"/>
        <property type="gene ID" value="PHAVU_002G228300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0911">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDIVMEL"/>
    <dbReference type="OrthoDB" id="415696at2759"/>
    <dbReference type="PhylomeDB" id="V7CQW0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:intracellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03028">
        <property type="entry name" value="GRX_PICOT_like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="CDD" id="cd02984">
        <property type="entry name" value="TRX_PICOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000012">
        <property type="entry name" value="Monothiol glutaredoxin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000092">
        <property type="entry name" value="Monothiol glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033658">
        <property type="entry name" value="GRX_PICOT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004480">
        <property type="entry name" value="Monothiol_GRX-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00365">
        <property type="entry name" value="Grx4 family monothiol glutaredoxin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10293">
        <property type="entry name" value="GLUTAREDOXIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10293:SF73">
        <property type="entry name" value="GLUTAREDOXIN-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="256"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="256"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="490" mass="53896" checksum="6541D87122698962" modified="2014-02-19" version="1">MGGSVKDVKSKGEVDAVVAGGSPVILHFWASWCEASKHMDQLFTHLSTDFPKAHFLRVEAEEQPEISEAYSVSAVPFFVFFKDGKTFDTLEGADPSSLANKVAKIAGSINPGEAASPASLGMAAGSAVLEAVKELAKENDSSKEKNVVQPGLSGPLRKRLQQLVDSHPVFLFMKGTPEEPKCKFSRKVVDVLKEEKVKFGSFDVMSDSELREGLKKFSNWPTFPQLYCKGELLGGCDIAVAMHENGELREVFKDQGIDTTDEAKEKESGDAKGGISKSTNLSSALSSRVESLINSNAVMLFMKGKPDEPKCGFSRKVVEILQQESVPFDSFDILTDEEVRQGLKVYSNWSSYPQLYIKGDLIGGSDIVLEMQKSGELQKTLREKGIIPAETIQDRLKRLIASSPVMLFMKGTPDVPRCGFSSRVVDALRQEGLSFGFFDILSDDDVRQGLKVYSNWPTFPQLYYKSELIGGHDIVMELKNNGELKSTLSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRT6</accession>
    <name>V7CRT6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G027200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRT6"/>
    <dbReference type="SMR" id="V7CRT6"/>
    <dbReference type="STRING" id="3885.V7CRT6"/>
    <dbReference type="Gramene" id="ESW32902">
        <property type="protein sequence ID" value="ESW32902"/>
        <property type="gene ID" value="PHAVU_001G027200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3126">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RLNNHGN"/>
    <dbReference type="OrthoDB" id="7827681at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005741">
        <property type="term" value="C:mitochondrial outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046930">
        <property type="term" value="C:pore complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015288">
        <property type="term" value="F:porin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008308">
        <property type="term" value="F:voltage-gated monoatomic anion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07306">
        <property type="entry name" value="Porin3_VDAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.10:FF:000003">
        <property type="entry name" value="Outer mitochondrial membrane protein porin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.10">
        <property type="entry name" value="Porin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023614">
        <property type="entry name" value="Porin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001925">
        <property type="entry name" value="Porin_Euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027246">
        <property type="entry name" value="Porin_Euk/Tom40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11743:SF61">
        <property type="entry name" value="MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11743">
        <property type="entry name" value="VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01459">
        <property type="entry name" value="Porin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00558">
        <property type="entry name" value="EUKARYOTIC_PORIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0626">Porin</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1134">Transmembrane beta strand</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW32902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="277" mass="29740" checksum="4C8A79E3DD326E4D" modified="2014-02-19" version="1">MSGKGPGFFSDIGKSGRDILTKDYNSDQRFTISSSANSGLDLKSTLVKSRGLSSGDVTTEFKYKNKVVNFKVDTESNVLTTLTVSDVVPSGKTIASIRLPDYSSGKFEAQYLHDHVAFTFGVGLTRSPAIDFSGTMGTPSIAFGAETSYSTSLGKFTKYNAGLCLKMPSSSASVILGDKGDSMKVSYLNQLERLNGGAVVGEISRRFSTNENTLTVGCSYVVDSQTVLKAKLNNHGNLGALLQHELTRKSFLTISGAFETKDLDKNPKFGFSLLLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRX0</accession>
    <name>V7CRX0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G030700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the BUD31 (G10) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRX0"/>
    <dbReference type="SMR" id="V7CRX0"/>
    <dbReference type="STRING" id="3885.V7CRX0"/>
    <dbReference type="Gramene" id="ESW32942">
        <property type="protein sequence ID" value="ESW32942"/>
        <property type="gene ID" value="PHAVU_001G030700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3404">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGTSCIC"/>
    <dbReference type="OrthoDB" id="277109at2759"/>
    <dbReference type="PhylomeDB" id="V7CRX0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001748">
        <property type="entry name" value="BUD31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018230">
        <property type="entry name" value="BUD31/G10-rel_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19411:SF0">
        <property type="entry name" value="PROTEIN BUD31 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19411">
        <property type="entry name" value="PROTEIN BUD31-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01125">
        <property type="entry name" value="BUD31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00322">
        <property type="entry name" value="G10"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00997">
        <property type="entry name" value="G10_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00998">
        <property type="entry name" value="G10_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="145" mass="17222" checksum="A009C9960B4E49E7" modified="2014-02-19" version="1">MPKVKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCKGCASGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUD0</accession>
    <name>V7CUD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">FHA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G328500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUD0"/>
    <dbReference type="SMR" id="V7CUD0"/>
    <dbReference type="STRING" id="3885.V7CUD0"/>
    <dbReference type="Gramene" id="ESW32511">
        <property type="protein sequence ID" value="ESW32511"/>
        <property type="gene ID" value="PHAVU_002G328500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S16E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENWIVHE"/>
    <dbReference type="OrthoDB" id="687730at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050923">
        <property type="entry name" value="Cell_Proc_Reg/RNA_Proc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23308">
        <property type="entry name" value="NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00240">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SMAD/FHA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FHA" evidence="3">
        <location>
            <begin position="29"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="108"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="275"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="334"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="133"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="289"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="41276" checksum="F0724654389CAD68" modified="2014-02-19" version="1">MEEALILRLEILQGPLQGKTLDFKPGSAVRIGRVVKGNTLPIKDPGISSKHLSILNESAKWILRDLDSSNGTVLDASRIPPNTPFTLHHDSTIKIGEFTSIRVIFLPSQQQQQQHDALPPRRNPTRRGRTAPAPDPVPVPAPSEPVKRRCRPRGRGVKGTDKSEVQSVDESDAGVVDVQSERVDPPARVTRKTSRARSVVKESSVENLIIAEEKVEERKSTRNPSLVVVSVSSDDDLDVPVVEEPKKARRTRNSKKTSGVTAKIENVEKKTKLGVAGKRGLDKEGEDGNGVKEACDGKEKGNSNEDDRSWPDLNKMTLGEWFDFLEVHLPKQIIDETEEMIDSMTQKAERLRKYIAEMQQQNGKDKMALER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVP7</accession>
    <name>V7CVP7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">HSF-type DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G131000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the HSF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVP7"/>
    <dbReference type="SMR" id="V7CVP7"/>
    <dbReference type="Gramene" id="ESW34174">
        <property type="protein sequence ID" value="ESW34174"/>
        <property type="gene ID" value="PHAVU_001G131000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0627">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRWEFSN"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000037">
        <property type="entry name" value="Heat stress transcription factor B-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000232">
        <property type="entry name" value="HSF_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015">
        <property type="entry name" value="HEAT SHOCK TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015:SF285">
        <property type="entry name" value="HEAT STRESS TRANSCRIPTION FACTOR B-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00447">
        <property type="entry name" value="HSF_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00056">
        <property type="entry name" value="HSFDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00415">
        <property type="entry name" value="HSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00434">
        <property type="entry name" value="HSF_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HSF-type DNA-binding" evidence="12">
        <location>
            <begin position="61"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="112"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="153"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="115"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW34174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="232" mass="26586" checksum="E221D1B8904FBEB6" modified="2014-02-19" version="1">MEASSDKGLLLECGRKCSPPPFLLKTYMLVEDPATDAVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDRFKKGEREQLYEIRRRKAWTNKQQPNVPNQGTPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVLNSELRSMKRKCKELLDSVAKYSSDAKEKEEDERPMLFGVRLDVEGGREMKRNRAKISESASIMLSQSCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWN1</accession>
    <name>V7CWN1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flowering locus T</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G097300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphatidylethanolamine-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWN1"/>
    <dbReference type="SMR" id="V7CWN1"/>
    <dbReference type="STRING" id="3885.V7CWN1"/>
    <dbReference type="Gramene" id="ESW33768">
        <property type="protein sequence ID" value="ESW33768"/>
        <property type="gene ID" value="PHAVU_001G097300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3346">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICKHEER"/>
    <dbReference type="OrthoDB" id="2506647at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00866">
        <property type="entry name" value="PEBP_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.280.10:FF:000001">
        <property type="entry name" value="Terminal flower 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.280.10">
        <property type="entry name" value="PEBP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008914">
        <property type="entry name" value="PEBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036610">
        <property type="entry name" value="PEBP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035810">
        <property type="entry name" value="PEBP_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001858">
        <property type="entry name" value="Phosphatidylethanolamine-bd_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11362:SF23">
        <property type="entry name" value="OS04G0488400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11362">
        <property type="entry name" value="PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01161">
        <property type="entry name" value="PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49777">
        <property type="entry name" value="PEBP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01220">
        <property type="entry name" value="PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="175" mass="19643" checksum="DCB2A930A8D8774E" modified="2014-02-19" version="1">MPTGSRNPLVVGRVIGEVVDPFETSIPFRVSYGNREVNNGCELKPSQVANQPRVSVGGDDLRIFYTLLLVDPDSPSPSNPNSREYLHWLVTDIPATTGASFGNEVVSYESPRPTMGIHRLVFVLFRQQYRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CX18</accession>
    <name>V7CX18_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G175400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CX18"/>
    <dbReference type="STRING" id="3885.V7CX18"/>
    <dbReference type="Gramene" id="ESW34722">
        <property type="protein sequence ID" value="ESW34722"/>
        <property type="gene ID" value="PHAVU_001G175400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUWP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWGSPIN"/>
    <dbReference type="OrthoDB" id="785861at2759"/>
    <dbReference type="PhylomeDB" id="V7CX18"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33448">
        <property type="entry name" value="CHLOROPLAST PROTEIN HCF243-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33448:SF10">
        <property type="entry name" value="PROTAMINE P1 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="243"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="29281" checksum="30210C6AB0C11A7C" modified="2014-02-19" version="1">MKLSAKPVSSPGRTEKFPPPLMRFLRSNAGSKSRRSRSSPMFVRKKTTANIQTQTTQEPSSPKVTCMGQVRVKRSSNTKRDVPPTRCRWIPKPNPCRYPPFCLTWPFFRPKPNQHSRSNHQEESESASQERANVDKNNVSFSSNSNTPPKNAFLLTRCRSAPYRSSSLACRFWSSPVKEQETDFSNTEPASEEPQTDAKLGFLGTKIASLTTEQEKVEELSSDENGVETVPAIASRSPVLTRCKSEPARTGHRIEPLVNNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXR6</accession>
    <name>V7CXR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">O-GlcNAc transferase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G1923000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein glycosylation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXR6"/>
    <dbReference type="STRING" id="3885.V7CXR6"/>
    <dbReference type="Gramene" id="ESW34924">
        <property type="protein sequence ID" value="ESW34924"/>
        <property type="gene ID" value="PHAVU_001G1923000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="17094at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051939">
        <property type="entry name" value="Glycosyltr_41/O-GlcNAc_trsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029489">
        <property type="entry name" value="OGT/SEC/SPY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44835:SF1">
        <property type="entry name" value="PROTEIN O-GLCNAC TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44835">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13844">
        <property type="entry name" value="Glyco_transf_41"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="7">
        <location>
            <begin position="6"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="7">
        <location>
            <begin position="127"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="349"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="349"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW34924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="410" mass="45535" checksum="88BB8B2805A1A5EF" modified="2014-02-19" version="1" fragment="single">ADAKTIRFREKVTKKGGIWKDIYGIDEKKVADMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSPEAGPVSSTPALSNGFITFGSFNNLAKITPKVLQVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLEPLRVDLLPLILLNHDHMHAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSAHAHNVGVSLLSKVGMEHLIAKNEDEYVELAQKLASDISALHNLRMSLRDLMSKSPVCDGAKFILGLESTYRNMWHRYCRGDVPSLKRLELLEEVAMGDLLNKNSEPERIANSREDSPGSVKANGFDTMPVSKLNMDSCEENGGPSNRSSKQGKRKVNVEFHPKILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1D0</accession>
    <name>V7D1D0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G226300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7D1D0"/>
    <dbReference type="STRING" id="3885.V7D1D0"/>
    <dbReference type="Gramene" id="ESW35330">
        <property type="protein sequence ID" value="ESW35330"/>
        <property type="gene ID" value="PHAVU_001G226300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0714">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASTCCYY"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="PhylomeDB" id="V7D1D0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010583">
        <property type="term" value="P:response to cyclopentenone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44743">
        <property type="entry name" value="PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44743:SF11">
        <property type="entry name" value="PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="12"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="18106" checksum="7366DC44D381BA47" modified="2014-02-19" version="1">MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWARNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDEEFCDFMQEMISMMNNVKDEGDSMEDLQRMFVEMVGGDGIGIDLSQDQMAGKRGRVNGSRGNAAKRSNSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFB5</accession>
    <name>V7AFB5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Small ribosomal subunit protein uS7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G081400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFB5"/>
    <dbReference type="SMR" id="V7AFB5"/>
    <dbReference type="STRING" id="3885.V7AFB5"/>
    <dbReference type="Gramene" id="ESW04272">
        <property type="protein sequence ID" value="ESW04272"/>
        <property type="gene ID" value="PHAVU_011G081400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3291">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MRPWNYL"/>
    <dbReference type="OrthoDB" id="35139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="entry name" value="Ribosomal protein S7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_uS7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_uS7_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="Ribosomal protein S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS7" evidence="4">
        <location>
            <begin position="4"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW04272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="55" mass="6185" checksum="84AEB7A749029BB4" modified="2014-02-19" version="1" fragment="single">ERGLLGASRKRPGRNMAFKLSSELVDVAKGSGDAIRKKEETHRMTEANRAFAHFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ36</accession>
    <name>V7AJ36_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PCI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G190600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CSN7/EIF3M family. CSN7 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ36"/>
    <dbReference type="SMR" id="V7AJ36"/>
    <dbReference type="STRING" id="3885.V7AJ36"/>
    <dbReference type="Gramene" id="ESW05569">
        <property type="protein sequence ID" value="ESW05569"/>
        <property type="gene ID" value="PHAVU_011G190600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3250">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTYKQFR"/>
    <dbReference type="OrthoDB" id="10265275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008180">
        <property type="term" value="C:COP9 signalosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045237">
        <property type="entry name" value="COPS7/eIF3m"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000717">
        <property type="entry name" value="PCI_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15350:SF5">
        <property type="entry name" value="COP9 SIGNALOSOME COMPLEX SUBUNIT 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15350">
        <property type="entry name" value="COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01399">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00088">
        <property type="entry name" value="PINT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50250">
        <property type="entry name" value="PCI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0736">Signalosome</keyword>
    <feature type="domain" description="PCI" evidence="3">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="247" mass="28132" checksum="C7EB45C620656A60" modified="2014-02-19" version="1">MDIEQRQSELIDHFVKRASAVSDAAALASVLVEATSHPSLFAFSEILALPNLLQLEATENSAFLDMLRLFAHGTWSDYKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQELDVANVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIHTLSNWLSTSESLLVSIQEKIKWADSMSEIDKKHRKDVEEKVEEVKKSIFKKLHTVSRPTSTSEAMRRSALNLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKC3</accession>
    <name>V7AKC3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="1">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G1684001g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="1"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKC3"/>
    <dbReference type="Gramene" id="ESW05298">
        <property type="protein sequence ID" value="ESW05298"/>
        <property type="gene ID" value="PHAVU_011G1684001g"/>
    </dbReference>
    <dbReference type="OMA" id="NQESCIS"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021820">
        <property type="entry name" value="S-locus_recpt_kinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF853">
        <property type="entry name" value="CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11883">
        <property type="entry name" value="DUF3403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="36"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="328"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="332"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW05298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="353" mass="39833" checksum="A1331CB199D70C06" modified="2014-02-19" version="1" fragment="single">KTKTKMATEDENDGKQEDLELPSFDLTTVIRATNNFSIENKLGEGGFGPVYKGTLVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCIEQEEKMLLYEYMPNKSLDLIIFDSYKSKNLEWQMRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEILSGKKNRVFTFQDNNHNLIDHAWNLWKEGTPEQLIDACLENSYNVLQVVRCIQIGLLCLQQHPNDRPNMTSVVVMLTSENSLPEPKEPGFLIRRASKDGENSSNRQTSSSVNEVSISLLNAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKL3</accession>
    <name>V7AKL3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_011G176300g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKL3"/>
    <dbReference type="Gramene" id="ESW05403">
        <property type="protein sequence ID" value="ESW05403"/>
        <property type="gene ID" value="PHAVU_011G176300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTRQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WFDSNIS"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF776">
        <property type="entry name" value="CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="426"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="16">
        <location>
            <begin position="56"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="493"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW05403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="718" mass="81903" checksum="64186051D436773F" modified="2014-02-19" version="1" fragment="single">THYLNLRHSITVSPSSCRLVFPYLKHPMRLILHKLLLAFMHLWFCFSSSTHVDAADDSLKPGDTFNTSSELYSKSRKYLLYFNSVTSGGEILTYLTIQSEYEAAIVWEGNKEQSVDYNDAVLSLNFSGVLKIESSSVNKPIILYSPPQPINNTVATLLDTGNFVLQHLHSNGTNTLLWQSFDYPFATLIPTMKLGVNHKTGHRSLLSSQKNEDGPTPGGFSLEWEPRGQELMIRRRGKVCWKSGKLRNNRFEHIPEDAQAVLKYSIVSNLDEDTFSFTSTNENITHIWSLSDTGRLYYNDKQGYVARADLCYGYNNTEGGCQRWQDIPKCRIPGDVFTKKSIHSNDENVTYETKENINHSDCEAACWGDCNCNGFAELYTDGTGCRFFQWNSSKDYIVDATVSGQDIYLLENKGNIIDHPHGTKRWIWISTVIATTLLILCASILCLAVKKRKHVLQEKKRKEMTLILGNDLNKKYGLKVLDYTLVVAATNEFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLARSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHDEEKILIYEYMPNKSLDFHLFDSTRSKLLHWNKRFNIIKWISQGLLYLHKYSRLKVWELWKDDKYFELMDPSLNEVFDHEEVQRCIHIGLLCVEHYANDRPTMSDIILMLTSKSSIVSLPQKPAFYVQRYMYDENLSSLELYTGSTVGITSSTVEMTAST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALF4</accession>
    <name>V7ALF4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfotransferase</fullName>
            <ecNumber evidence="3">2.8.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G199500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the sulfotransferase 1 family.</text>
    </comment>
    <dbReference type="EC" id="2.8.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALF4"/>
    <dbReference type="SMR" id="V7ALF4"/>
    <dbReference type="Gramene" id="ESW05668">
        <property type="protein sequence ID" value="ESW05668"/>
        <property type="gene ID" value="PHAVU_011G199500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHTFRAR"/>
    <dbReference type="OrthoDB" id="205623at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11783">
        <property type="entry name" value="SULFOTRANSFERASE SULT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulfotransferase" evidence="4">
        <location>
            <begin position="163"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="283" mass="32622" checksum="F66C21700EF7202F" modified="2014-02-19" version="1">MALASHKQTNEENDLTLSLPKETGLSAAPYLHLFQDFWCPSFYVQGVNNFQKHFHAKDNDVFVASFPKSGTTWLKALGFAIVNHQRFSSFDHHPLLSSNPHQLVPFPEFILSHDLHDQILSLSNMSEPRVLGTHVPFPSLPQSIIKSNCKIIYICRNPFDTFYCNGIMGFGPWWSHMLGYWKESIARPNKVLFLKYEDLKEDTVFHVKRIADFLDSPITQGRESNTLIENIIKLCGFEKMKDLKVNKSGYIFGVEKKIFFQKSKIGDWINYFSPSIIEKLKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALH4</accession>
    <name>V7ALH4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UBA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G020300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALH4"/>
    <dbReference type="SMR" id="V7ALH4"/>
    <dbReference type="STRING" id="3885.V7ALH4"/>
    <dbReference type="Gramene" id="ESW06110">
        <property type="protein sequence ID" value="ESW06110"/>
        <property type="gene ID" value="PHAVU_010G020300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2699">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLRWCGF"/>
    <dbReference type="OrthoDB" id="336240at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd14290">
        <property type="entry name" value="UBA_PUB_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036339">
        <property type="entry name" value="PUB-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018997">
        <property type="entry name" value="PUB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46713">
        <property type="entry name" value="F13M7.16 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46713:SF7">
        <property type="entry name" value="UBX DOMAIN-CONTAINING PROTEIN 1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09409">
        <property type="entry name" value="PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22562">
        <property type="entry name" value="UBA_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00580">
        <property type="entry name" value="PUG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143503">
        <property type="entry name" value="PUG domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBA" evidence="2">
        <location>
            <begin position="5"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="35987" checksum="FC8969A78A98D6C9" modified="2014-02-19" version="1">MFVPTVNQNLLEDLEVMGFPKARATRALHYSGNTSLEDAINWIVDHENDIDIDEMPLVDVDIEVESTESFPISEEIRIKAQSLREQERKRKEQEEKRLEREREKERIQAGKRLLEAKRIAEENERKRDLSLRKAEKEEEKRARERVLQKLEQDKLNRRFKQGLPLEGQATVRSSATKIQQEKKLNLVYTTTKSEQLRECLRNLKRNHQGEDARVRRAFQTLLVYIGTVAKNPKEEKYRKIRLQNPLFLDRVGSLNGGVEFLELCGFERTGDFLLLPQEKIDMALLNSAGFVLNSAMTNPFFGVLSKAHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALT6</accession>
    <name>V7ALT6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">FACT complex subunit SSRP1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_011G212400g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Component of the FACT complex, a stable heterodimer of SPT16 and SSRP1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="13">Chromosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 13">Belongs to the SSRP1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALT6"/>
    <dbReference type="SMR" id="V7ALT6"/>
    <dbReference type="STRING" id="3885.V7ALT6"/>
    <dbReference type="Gramene" id="ESW05823">
        <property type="protein sequence ID" value="ESW05823"/>
        <property type="gene ID" value="PHAVU_011G212400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0526">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KNEHGIT"/>
    <dbReference type="OrthoDB" id="498543at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035101">
        <property type="term" value="C:FACT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031491">
        <property type="term" value="F:nucleosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd22013">
        <property type="entry name" value="HMG-box_AtSSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13230">
        <property type="entry name" value="PH1_SSRP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd13231">
        <property type="entry name" value="PH2_SSRP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.30.10:FF:000016">
        <property type="entry name" value="FACT complex subunit SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.150:FF:000001">
        <property type="entry name" value="Fact complex subunit ssrp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.220:FF:000002">
        <property type="entry name" value="FACT complex subunit SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.30:FF:000214">
        <property type="entry name" value="FACT complex subunit SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.29.30:FF:000298">
        <property type="entry name" value="FACT complex subunit SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.220">
        <property type="entry name" value="Structure-specific recognition protein (SSRP1)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009071">
        <property type="entry name" value="HMG_box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013719">
        <property type="entry name" value="RTT106/SPT16-like_middle_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050454">
        <property type="entry name" value="RTT106/SSRP1_HistChap/FACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048993">
        <property type="entry name" value="SSRP1-like_PH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000969">
        <property type="entry name" value="SSRP1/POB3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035417">
        <property type="entry name" value="SSRP1/POB3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024954">
        <property type="entry name" value="SSRP1_DD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038167">
        <property type="entry name" value="SSRP1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45849">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45849:SF1">
        <property type="entry name" value="FACT COMPLEX SUBUNIT SSRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00505">
        <property type="entry name" value="HMG_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21103">
        <property type="entry name" value="PH1_SSRP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17292">
        <property type="entry name" value="POB3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08512">
        <property type="entry name" value="Rttp106-like_middle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03531">
        <property type="entry name" value="SSrecog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00887">
        <property type="entry name" value="SSRCOGNITION"/>
    </dbReference>
    <dbReference type="SMART" id="SM00398">
        <property type="entry name" value="HMG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01287">
        <property type="entry name" value="Rtt106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50118">
        <property type="entry name" value="HMG_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 13" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11 12 13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 13" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 13" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HMG box" evidence="15">
        <location>
            <begin position="556"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="HMG box" evidence="12">
        <location>
            <begin position="556"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="469"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="595"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="14">
        <location>
            <begin position="474"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="505"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="595"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="627"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW05823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="640" mass="71872" checksum="945252795EA83FD5" modified="2014-02-19" version="1">MTDGHQFNNITLGGRGGTNPGQIKIHSGGIVWKRQGGGKLIEVDTSDIEGVTWMKVPKTNQLGVQIKDGLYYKFTGFREQDVVSLTNFFQNTCGITVREKQLSVSGRNWGEVDLNGNMLAFMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSSNTQFVGDEKTPPAEVFRSRIMSMADVGAGGEDAVVTFESIAILTPRGRYIVELHMSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFESDYVVQSELTMNEDLYNTKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMNLGDGQPTAGIKKVLENDDDDAVDPHLERIKNAAGDDESDEEDSDFVADKDDEGSPTDDSGADDSDASKSGDEKEKPAKKEIKKDLPPKASTSKKKSKDDEDGKKKKQKKKKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWKKMSVEEKEPYEAKAREDKKRYKDEISDYKNPQPMNVDSANVSDGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMG8</accession>
    <name>V7AMG8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">alpha,alpha-trehalose-phosphate synthase (UDP-forming)</fullName>
            <ecNumber evidence="3">2.4.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G170300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the trehalose phosphatase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the glycosyltransferase 20 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.15" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMG8"/>
    <dbReference type="SMR" id="V7AMG8"/>
    <dbReference type="STRING" id="3885.V7AMG8"/>
    <dbReference type="Gramene" id="ESW05320">
        <property type="protein sequence ID" value="ESW05320"/>
        <property type="gene ID" value="PHAVU_011G170300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05321">
        <property type="protein sequence ID" value="ESW05321"/>
        <property type="gene ID" value="PHAVU_011G170300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW05322">
        <property type="protein sequence ID" value="ESW05322"/>
        <property type="gene ID" value="PHAVU_011G170300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1050">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTEAHYY"/>
    <dbReference type="OrthoDB" id="755951at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003825">
        <property type="term" value="F:alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004805">
        <property type="term" value="F:trehalose-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03788">
        <property type="entry name" value="GT20_TPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01627">
        <property type="entry name" value="HAD_TPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000100">
        <property type="entry name" value="Alpha,alpha-trehalose-phosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1020:FF:000001">
        <property type="entry name" value="Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000046">
        <property type="entry name" value="alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000039">
        <property type="entry name" value="alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1020">
        <property type="entry name" value="Trehalose-6-phosphate phosphatase related protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001830">
        <property type="entry name" value="Glyco_trans_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012766">
        <property type="entry name" value="Trehalose_OtsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF011071">
        <property type="entry name" value="PRK14501.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02400">
        <property type="entry name" value="trehalose_OtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788:SF130">
        <property type="entry name" value="ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788">
        <property type="entry name" value="TREHALOSE-6-PHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00982">
        <property type="entry name" value="Glyco_transf_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="830"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="842"/>
            <end position="856"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="925" mass="104508" checksum="235EF7C7EB1270C3" modified="2014-02-19" version="1">MPGNKYTGNSNQIPGRVERLLRERELRKSGRVIQLKEGNESNGKSGEALEKEKVRLREEESAAVDGGVEGSRVKEVGEERHETKALRQRLLVVANRLPVSAVRKGEDVWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMSLPKCLKKHNKNMKVGWFLHTPFPSSEIHRTLPSRSELLHFVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPRVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEEDPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFYQLCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIARALKMPSAEREKRHKHNFLHVTSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPQLPTKAAIESYQQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCSDPNTTVVVLSGSGRQVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWLDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNASVEVVQGTRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYSFFEPDLPSIGVGLPRSKVTTEGVKFPVERKPSLKVPATKSGPKSSQNKATRPLSNSEKKTNNHISITPRKAASEKVSWNVLDLKKENYFSCAVGRTRTNARYTFDSSDDVVSFLKELANASFRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMI5</accession>
    <name>V7AMI5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G051700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMI5"/>
    <dbReference type="STRING" id="3885.V7AMI5"/>
    <dbReference type="Gramene" id="ESW06485">
        <property type="protein sequence ID" value="ESW06485"/>
        <property type="gene ID" value="PHAVU_010G051700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7JS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAINSIQ"/>
    <dbReference type="OrthoDB" id="600752at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001709">
        <property type="term" value="P:cell fate determination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040361">
        <property type="entry name" value="TPD1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33184:SF80">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33184">
        <property type="entry name" value="PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24068">
        <property type="entry name" value="TPD1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753553" evidence="2">
        <location>
            <begin position="20"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="12886" checksum="63AA02C6635BA5B1" modified="2014-02-19" version="1">MVKNFIVAFLLVFVSQAYGQCSLNDIHVTQSRTGRTVGGKPEWSVTITNWCACVQQNVQLNCKGFKTVEPVESSLLKVSGDVCLLSLGQPVWKGAIEFNYAWDTQFPLNPISSKVAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANY1</accession>
    <name>V7ANY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RBR-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="6">2.3.2.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G124500g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-N(6)-ubiquitinyl-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.31"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RBR family. Ariadne subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.31" evidence="6"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANY1"/>
    <dbReference type="STRING" id="3885.V7ANY1"/>
    <dbReference type="Gramene" id="ESW07372">
        <property type="protein sequence ID" value="ESW07372"/>
        <property type="gene ID" value="PHAVU_010G124500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1812">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMCPREN"/>
    <dbReference type="OrthoDB" id="10009520at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd22582">
        <property type="entry name" value="BRcat_RBR_unk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd22584">
        <property type="entry name" value="Rcat_RBR_unk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000230">
        <property type="entry name" value="RBR-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031127">
        <property type="entry name" value="E3_UB_ligase_RBR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002867">
        <property type="entry name" value="IBR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044066">
        <property type="entry name" value="TRIAD_supradom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018957">
        <property type="entry name" value="Znf_C3HC4_RING-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11685">
        <property type="entry name" value="RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01485">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00097">
        <property type="entry name" value="zf-C3HC4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00647">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51873">
        <property type="entry name" value="TRIAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="12" id="KW-0862">Zinc</keyword>
    <keyword evidence="10 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="15">
        <location>
            <begin position="23"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="14">
        <location>
            <begin position="27"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW07372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="222" mass="25618" checksum="EB8308476EB01F6E" modified="2014-02-19" version="1" fragment="single">ESDSEDAPLRILKGKQIKTEESSNVYCAICMDEQPDEKMFKNQHCSHIFCNDCIRRHVAAKIEENRSVVECPHPSCKQVLEPHQCRSIIPEELFDKWGNVLCQNLVPESEKFYCPFKDCSAMMICDCNEVVSSCECPHCNRIFCAQCKVSWHAEIGCEEFQKLEEAKVEKGDSLVMELAKSKSWRRCPKCSFYVERIEGCCRIVCRCGHKFCYDCGLSWKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQD8</accession>
    <name>V7AQD8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G079700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQD8"/>
    <dbReference type="STRING" id="3885.V7AQD8"/>
    <dbReference type="Gramene" id="ESW06823">
        <property type="protein sequence ID" value="ESW06823"/>
        <property type="gene ID" value="PHAVU_010G079700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3J8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YIRLGPT"/>
    <dbReference type="OrthoDB" id="1026046at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374">
        <property type="entry name" value="AUXIN-INDUCED PROTEIN-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374:SF304">
        <property type="entry name" value="OS04G0537100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="18380" checksum="D4046491520F5DD5" modified="2014-02-19" version="1">MQFRLGKRVICVAKWVFRRVRIRPNRYYRLGSTSPSHNRTYNPITKLLTWGTKLKRGAKSLCKKSGSGPVCESAPAVPKGHLAVYVAEDDGECRRVLVPVIYFNHPLFSGLLMEAEKEFGFQHPGGITIPCRLTEFERVKTRIASGSGSRGRTRRLGRRQYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQH7</accession>
    <name>V7AQH7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G160800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NRAMP (TC 2.A.55) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQH7"/>
    <dbReference type="SMR" id="V7AQH7"/>
    <dbReference type="STRING" id="3885.V7AQH7"/>
    <dbReference type="Gramene" id="ESW07809">
        <property type="protein sequence ID" value="ESW07809"/>
        <property type="gene ID" value="PHAVU_010G160800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07810">
        <property type="protein sequence ID" value="ESW07810"/>
        <property type="gene ID" value="PHAVU_010G160800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07811">
        <property type="protein sequence ID" value="ESW07811"/>
        <property type="gene ID" value="PHAVU_010G160800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1291">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNMANEQ"/>
    <dbReference type="OrthoDB" id="409173at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015086">
        <property type="term" value="F:cadmium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005384">
        <property type="term" value="F:manganese ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034755">
        <property type="term" value="P:iron ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00221">
        <property type="entry name" value="NRAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001046">
        <property type="entry name" value="NRAMP_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01197">
        <property type="entry name" value="nramp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF037982">
        <property type="entry name" value="Nramp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001923">
        <property type="entry name" value="PRK00701.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11706:SF54">
        <property type="entry name" value="METAL TRANSPORTER NRAMP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11706">
        <property type="entry name" value="SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01566">
        <property type="entry name" value="Nramp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00447">
        <property type="entry name" value="NATRESASSCMP"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="224"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="330"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="369"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="394"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="426"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="470"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW07809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="544" mass="59089" checksum="86F600E1664B97D1" modified="2014-02-19" version="1">MSVRGSSSGQPQFIASTGNRSLSNAPLIENSDSDQIVVPDRTSWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAKYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRLPNFILWVIAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGFSTLVLLALQQYGVRKLEFFIAFLVFTIAGCFMAELGYAKPVAKEVVTGLFVPKLEGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMMESALALTVAFLINISVISVSGAVCSSSNLSAEDQNSCQDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNLLTRSLAIVPSLIVALIGGSAGAGELIIIASMILSFELPFALIPLLKFTSSKIKMGEHVNSITISAVTWIIGSLIMGINIYYLVTSFVKLLLHAELRIVTTVFLGILGFSGVALYMGGIAYLVFRKNTKTTYILTFSTSEDQNMANEQGDVSMYCLPREDIVSMQLPQKRSSPEFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQJ0</accession>
    <name>V7AQJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G0039001g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQJ0"/>
    <dbReference type="Gramene" id="ESW07922">
        <property type="protein sequence ID" value="ESW07922"/>
        <property type="gene ID" value="PHAVU_009G0039001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMIFEME"/>
    <dbReference type="OrthoDB" id="1415093at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000780">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000090">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF370">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="75"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="106"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="207"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="363" mass="39864" checksum="C0BC8D19AC0D72DD" modified="2014-02-19" version="1" fragment="single">MRLDSVVLDDFTLATVLGVCSGKNYAAPGELLHGYSIKSGMESSVPVGNAIITMYAKCGDTEKAGLAFTLMPLRDTISWTAMISAFSQNGDIDRARQCFDTMPERNVITWNSMLSTYFQHGFTEEGMKLYVRMRRKAVKPDWVTFATSIRACADLATVKLGTQVISHAMKFGLSLDVTVANSIVTMYSRCGLIKEAQKVFDSIHVKGLISWNSMMAAFAKNGIGKKVIETFEDMLRTGCKPDHISYVAVLSGCSHMGLVAEGKHYYDSMTRVFGISPTNEHFACMVDLLGRAGLLDQAKNLIDGMPFKPNATVWSALLGACRIHHDSRLAETAMKKLMELNVEDSGGYVLLANIYAELGELEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQN6</accession>
    <name>V7AQN6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 11">Malate dehydrogenase</fullName>
            <ecNumber evidence="2 11">1.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_010G055700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6 11">
            <text>(S)-malate + NAD(+) = oxaloacetate + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily. MDH type 2 family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="2 11"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQN6"/>
    <dbReference type="SMR" id="V7AQN6"/>
    <dbReference type="STRING" id="3885.V7AQN6"/>
    <dbReference type="Gramene" id="ESW06531">
        <property type="protein sequence ID" value="ESW06531"/>
        <property type="gene ID" value="PHAVU_010G055700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1496">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="4069699at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006108">
        <property type="term" value="P:malate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01336">
        <property type="entry name" value="MDH_cytoplasmic_cytosolic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000010">
        <property type="entry name" value="Malate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.110.10:FF:000002">
        <property type="entry name" value="Malate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="entry name" value="Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001252">
        <property type="entry name" value="Malate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011274">
        <property type="entry name" value="Malate_DH_NAD-dep_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010945">
        <property type="entry name" value="Malate_DH_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01759">
        <property type="entry name" value="MalateDH-SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01758">
        <property type="entry name" value="MDH_euk_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003916">
        <property type="entry name" value="PRK05442.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23382">
        <property type="entry name" value="MALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="LDH C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00068">
        <property type="entry name" value="MDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 11" id="KW-0520">NAD</keyword>
    <keyword evidence="4 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase N-terminal" evidence="12">
        <location>
            <begin position="49"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Lactate/malate dehydrogenase C-terminal" evidence="13">
        <location>
            <begin position="198"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="53"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="171"/>
            <end position="173"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00048313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW06531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="373" mass="40915" checksum="BC5B81B35807B528" modified="2014-02-19" version="1">MELEMLAWDTENYTFLKKILLVLLCVILFWKIVRYMFSLLKEEKEPITVLVTGAAGQIGYALVPMIARGAMLGPDQPVILHMLDIEPAAESLKGVKMELVDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADCKVLVVANPANTNALILKEFAPSIPDKNITCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVTANGAQKPVRELIGDDNWLNNEFIATVQQRGAAIIKARKLSSALSAASSACDHIHDWVVGTPKDTWVSMGVYSDGSYGVQAGLIYSFPVTCEKGDWTIVQNLKIDEFSRDKMDKTAQELVEEKALAKSCLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQS1</accession>
    <name>V7AQS1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">30S ribosomal protein S31, mitochondrial</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G002700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ribosomal protein bTHX family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQS1"/>
    <dbReference type="SMR" id="V7AQS1"/>
    <dbReference type="STRING" id="3885.V7AQS1"/>
    <dbReference type="Gramene" id="ESW07909">
        <property type="protein sequence ID" value="ESW07909"/>
        <property type="gene ID" value="PHAVU_009G002700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S834">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCSSMTR"/>
    <dbReference type="OrthoDB" id="911986at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032544">
        <property type="term" value="P:plastid translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030826">
        <property type="entry name" value="Ribosomal_bTHX/bTHXc/bTHXm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044695">
        <property type="entry name" value="Ribosomal_bTHXc/bTHXc_plant"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR04560">
        <property type="entry name" value="ribo_THX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34550">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34550:SF3">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN BTHXM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17067">
        <property type="entry name" value="RPS31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="37"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="82" mass="9231" checksum="ED447A8FD9C90FD4" modified="2014-02-19" version="1">MASSGVSVMQRCSVAARWFIKAERAAAPPQLCGRGDKKTKKGKRFKGSYGNARPKKEKMIERIKDKVEVPRSTPWPLPFKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR24</accession>
    <name>V7AR24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G156500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR24"/>
    <dbReference type="SMR" id="V7AR24"/>
    <dbReference type="STRING" id="3885.V7AR24"/>
    <dbReference type="Gramene" id="ESW07755">
        <property type="protein sequence ID" value="ESW07755"/>
        <property type="gene ID" value="PHAVU_010G156500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YLHDHAT"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7AR24"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000317">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000305">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF1">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="38"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="326"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="350"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW07755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="365" mass="41720" checksum="2357143F19CABEFA" modified="2014-02-19" version="1">MAFWFCCGKVSNRARRGKEQPTWRVFSLKELHSATNNFNYDNKLGEGCFGSVYWGQLWDGSQIVVKRLKVWSNIDETEFTVELEILARIRHKNLLSFRGFCAEGQERLIVYEYMHNLSLHSHLHGHHSFESPLDWNRRMKIAIGSAEGIVYLHHQATPRIIHRDIKSSNVLLDSDFRAKVADFGFARLIPDGATHVMTTKVKGTLGYLAPEYAMLGKAYESCDVYSFGVLLLELASGRRPTEKLSSTVRQSIVDWALPLVCEKKFGEIADPRLNGNYVEAELKRVVLVALMSAQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRNPLDAETNDGTSETEDSFDYISEEKELERPLRENAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR87</accession>
    <name>V7AR87_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G017800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR87"/>
    <dbReference type="Gramene" id="ESW08094">
        <property type="protein sequence ID" value="ESW08094"/>
        <property type="gene ID" value="PHAVU_009G017800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1DS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IYIKARN"/>
    <dbReference type="OrthoDB" id="1723061at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37714">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37714:SF1">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="108" mass="11744" checksum="500CFD7A32120CF3" modified="2014-02-19" version="1">MAISDVVARNLTTIFLALMASFQAYAFVCGRSFNGGYVVIVSTAAVILILLTTLTWDVSRKATCAFHRDHGDSREVCKGGICWHGVAPRSPASQVRLRIPRQLPLAPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASG9</accession>
    <name>V7ASG9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Signal peptidase complex-like protein DTM1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G031100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SPCS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASG9"/>
    <dbReference type="STRING" id="3885.V7ASG9"/>
    <dbReference type="Gramene" id="ESW08245">
        <property type="protein sequence ID" value="ESW08245"/>
        <property type="gene ID" value="PHAVU_009G031100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4VD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWWMFVS"/>
    <dbReference type="OrthoDB" id="1861824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005787">
        <property type="term" value="C:signal peptidase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048658">
        <property type="term" value="P:anther wall tapetum development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039955">
        <property type="entry name" value="DTM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009542">
        <property type="entry name" value="Spc1/SPCS1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38354">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX-LIKE PROTEIN DTM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38354:SF2">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX-LIKE PROTEIN DTM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06645">
        <property type="entry name" value="SPC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="110" mass="12617" checksum="18CEE5A48284EFE9" modified="2014-02-19" version="1">MSNDAVLRTSLLWLAALILAVSVFTHSFKKMMVTYVFGVLGIAALLLPDWDYFNRDFSRWPYPITAEERANSPHAQGSGFLRFAHSPLRVIVYSVVYGCAMYKWWEYVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASV9</accession>
    <name>V7ASV9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G043200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASV9"/>
    <dbReference type="STRING" id="3885.V7ASV9"/>
    <dbReference type="Gramene" id="ESW08410">
        <property type="protein sequence ID" value="ESW08410"/>
        <property type="gene ID" value="PHAVU_009G043200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RSM6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQNEPGL"/>
    <dbReference type="OrthoDB" id="684963at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32096:SF146">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 19-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32096">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="8">
        <location>
            <begin position="229"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="167"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="59"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="173"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="388" mass="43430" checksum="F5C8CC852569D491" modified="2014-02-19" version="1">MFFLYSCFDFSLTTDTTPQHLHRSLVRTLHFQTHINIIITTFLYFQISPHENCKLLEAMEEVINSIHRASELIQRLEQDLPNMVNQPGTLSLSIDEITEAITAAKEKLLLISRHNQTSESPPMLLHETTPQQPQMDATLMQEWLRSSHALTMDQLFQMQQRAARSSLQIGEMGGREVEDSERSMGSEGDQGQGIHAPSRPRRRSREANQEKKKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNANIFEVTYRGKHTCHMSSTAPSSSSLPLEQLLVDMTQSSNTISSQLSPSVNLSLLPGSGAAATTSGRGGASTSRFGADYAVVDMADAMFNSGSSSGNNSMEFLFSPAEDKSDAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATP5</accession>
    <name>V7ATP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phospholipase/carboxylesterase/thioesterase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G095000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATP5"/>
    <dbReference type="SMR" id="V7ATP5"/>
    <dbReference type="STRING" id="3885.V7ATP5"/>
    <dbReference type="Gramene" id="ESW09037">
        <property type="protein sequence ID" value="ESW09037"/>
        <property type="gene ID" value="PHAVU_009G095000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2112">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LEHWFAP"/>
    <dbReference type="OrthoDB" id="2418081at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46234">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phospholipase/carboxylesterase/thioesterase" evidence="1">
        <location>
            <begin position="25"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="27916" checksum="398A64F882195B86" modified="2014-02-19" version="1">MSYNSSSMTSGSGSSRRAFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPSDLEGLDASAAHVANLLSTEPPNIKLGIGGFSMGAATALYSATCHVLGHYRNGNIYRINLSAIVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMTLSSAGFPNLMFRSYNGLGHYTVPEETDEVCRWLTGNLGLEGFRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUE0</accession>
    <name>V7AUE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">FAF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G027500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the fantastic four family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUE0"/>
    <dbReference type="STRING" id="3885.V7AUE0"/>
    <dbReference type="Gramene" id="ESW08203">
        <property type="protein sequence ID" value="ESW08203"/>
        <property type="gene ID" value="PHAVU_009G027500g"/>
    </dbReference>
    <dbReference type="OMA" id="DEKEYPP"/>
    <dbReference type="OrthoDB" id="1928183at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021410">
        <property type="entry name" value="FAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046431">
        <property type="entry name" value="FAF_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33155:SF17">
        <property type="entry name" value="F2E2.18-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33155">
        <property type="entry name" value="FANTASTIC FOUR-LIKE PROTEIN (DUF3049)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11250">
        <property type="entry name" value="FAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAF" evidence="3">
        <location>
            <begin position="50"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW08203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="134" mass="15080" checksum="7082294F194B1B62" modified="2014-02-19" version="1">MTSNYGDDYIGSESCNIDLRNDTVLHHCELSKRNTVLGSKSSSKRREKRELPPPIPHMDIVLRRHYTSDGRLILEEEKVKHHECFRTHRANGRLTMHLVPLHHQASKEEAAAAAAPPTPLQISTDDANGIIQLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUZ3</accession>
    <name>V7AUZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">General transcription and DNA repair factor IIH subunit TFB4</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">RNA polymerase II transcription factor B subunit 4</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G124300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Component of the 7-subunit TFIIH core complex composed of XPB, XPD, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, TFB2/GTF2H4 and TFB5/GTF2H5, which is active in NER. The core complex associates with the 3-subunit CDK-activating kinase (CAK) module composed of CYCH1/cyclin H1, CDKD and MAT1/At4g30820 to form the 10-subunit holoenzyme (holo-TFIIH) active in transcription.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the TFB4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUZ3"/>
    <dbReference type="SMR" id="V7AUZ3"/>
    <dbReference type="STRING" id="3885.V7AUZ3"/>
    <dbReference type="Gramene" id="ESW09399">
        <property type="protein sequence ID" value="ESW09399"/>
        <property type="gene ID" value="PHAVU_009G124300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2487">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QGCDITS"/>
    <dbReference type="OrthoDB" id="17307at2759"/>
    <dbReference type="PhylomeDB" id="V7AUZ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000439">
        <property type="term" value="C:transcription factor TFIIH core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005675">
        <property type="term" value="C:transcription factor TFIIH holo complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.410:FF:000064">
        <property type="entry name" value="RNA polymerase II transcription factor B subunit 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="entry name" value="von Willebrand factor, type A domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004600">
        <property type="entry name" value="TFIIH_Tfb4/GTF2H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12831:SF0">
        <property type="entry name" value="GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12831">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03850">
        <property type="entry name" value="Tfb4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 11" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 11" id="KW-0863">Zinc-finger</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU368090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW09399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="292" mass="32021" checksum="9E8A905735F31C6A" modified="2014-02-19" version="1">MPSAPSKLYADDVSLLVVTLDTNPFFWTTFPFPFAEFLSQVLAFLNSILLLGQLNQLIVIATGCNSCAYVYDSTSERNHGSTTGTMPALYSNLLHNLHEFLARDKQLEASHKPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQRSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAKVDASEANRKRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVC6</accession>
    <name>V7AVC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein RER1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G023300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the RER1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVC6"/>
    <dbReference type="STRING" id="3885.V7AVC6"/>
    <dbReference type="Gramene" id="ESW08156">
        <property type="protein sequence ID" value="ESW08156"/>
        <property type="gene ID" value="PHAVU_009G023300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08157">
        <property type="protein sequence ID" value="ESW08157"/>
        <property type="gene ID" value="PHAVU_009G023300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08158">
        <property type="protein sequence ID" value="ESW08158"/>
        <property type="gene ID" value="PHAVU_009G023300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1688">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPAMQWK"/>
    <dbReference type="OrthoDB" id="448250at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006621">
        <property type="term" value="P:protein retention in ER lumen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006890">
        <property type="term" value="P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004932">
        <property type="entry name" value="Rer1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10743">
        <property type="entry name" value="PROTEIN RER1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10743:SF17">
        <property type="entry name" value="PROTEIN RER1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03248">
        <property type="entry name" value="Rer1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016013">
        <property type="entry name" value="AtER_Rer1p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR016013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="22135" checksum="C533B00FCD992810" modified="2014-02-19" version="1">MEGSGGGASPSSAPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVMASIYVLRIVYVQGFYVVSYGLGIYLLNLLIGFLSPLVDPELDPSNSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSPFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYSGKKSSAGSSGSRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWC0</accession>
    <name>V7AWC0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RIN4 pathogenic type III effector avirulence factor Avr cleavage site domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G139200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWC0"/>
    <dbReference type="STRING" id="3885.V7AWC0"/>
    <dbReference type="Gramene" id="ESW09585">
        <property type="protein sequence ID" value="ESW09585"/>
        <property type="gene ID" value="PHAVU_009G139200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3HV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1880088at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008700">
        <property type="entry name" value="TypeIII_avirulence_cleave"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33882:SF2">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33882">
        <property type="entry name" value="PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05627">
        <property type="entry name" value="AvrRpt-cleavage"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RIN4 pathogenic type III effector avirulence factor Avr cleavage site" evidence="2">
        <location>
            <begin position="11"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="12447" checksum="2F3DC5F0C732F2F8" modified="2014-02-19" version="1">MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTNNTNTVHSDEHQHPHYHQTSSPTVRSLPSFIIPFVISYITVLATI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0B9</accession>
    <name>V7B0B9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_008G021000g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0B9"/>
    <dbReference type="STRING" id="3885.V7B0B9"/>
    <dbReference type="Gramene" id="ESW11332">
        <property type="protein sequence ID" value="ESW11332"/>
        <property type="gene ID" value="PHAVU_008G021000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VVMAVWF"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019901">
        <property type="term" value="F:protein kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000173">
        <property type="entry name" value="proline-rich receptor-like protein kinase PERK8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000212">
        <property type="entry name" value="Proline-rich receptor-like protein kinase PERK8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047117">
        <property type="entry name" value="PERK1-13-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47982:SF32">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47982">
        <property type="entry name" value="PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="292"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="395"/>
            <end position="675"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="1"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="712"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="15">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="15">
        <location>
            <begin position="53"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="15">
        <location>
            <begin position="200"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="732"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="423"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW11332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="743" mass="78240" checksum="7464099165F1CAE1" modified="2014-02-19" version="1">MSSTNPSPNASPVAVPPVLGGIVSPPPSSSSPTNSSTPPSPPNSSQPNQTPDSPAPSSPSDPSAPPPSPPQAVPVTPPPSISLSPPPSSPSPPTLPPPSPPDSPPPLPPASPTPPVVTSSPPPPATTTAPPPAELPPSPPVSSPPASPTVPPPPQSPPATISPPSQPISQSPPPPANVPRPPSTGTPPQKESPPKTTPSHAPPPPVSQSPPKPPSSDVPPPSTLPSTPPSLPSGSSPPASLPDPPTNGTASGGPPVPLPSLPTEKPTARPTNDGSNNIATTNTPSDSGGLNAGASVAIGIVVGFFVLSLLVMAVWFVQKKKKKEKGSRGGYAAPSPFTSSHNSGTLFLRPHSPANFVAGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGLLVDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLDYHLHDENRPVMDWPTRMKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDLNYEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSYGVVLLELITGRKPVDASQPIGDESLVEWARPLLSEAVDKEDFEILVDSRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSIFNESQSSWRSRDQDSTTMFSQNKTGPWNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0J0</accession>
    <name>V7B0J0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Exportin-T</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11 13">Exportin(tRNA)</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12 13">tRNA exportin</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G263000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="13">Nucleus</location>
        </subcellularLocation>
        <text evidence="13">Shuttles between the nucleus and the cytoplasm.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the exportin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0J0"/>
    <dbReference type="SMR" id="V7B0J0"/>
    <dbReference type="STRING" id="3885.V7B0J0"/>
    <dbReference type="Gramene" id="ESW11070">
        <property type="protein sequence ID" value="ESW11070"/>
        <property type="gene ID" value="PHAVU_009G263000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2021">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEMFLFG"/>
    <dbReference type="OrthoDB" id="26399at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016363">
        <property type="term" value="C:nuclear matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005643">
        <property type="term" value="C:nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005049">
        <property type="term" value="F:nuclear export signal receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031267">
        <property type="term" value="F:small GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009908">
        <property type="term" value="P:flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010014">
        <property type="term" value="P:meristem initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071528">
        <property type="term" value="P:tRNA re-export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000295">
        <property type="entry name" value="Exportin-T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013598">
        <property type="entry name" value="Exportin-1/Importin-b-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045546">
        <property type="entry name" value="Exportin-T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040017">
        <property type="entry name" value="XPOT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15952:SF11">
        <property type="entry name" value="EXPORTIN-T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15952">
        <property type="entry name" value="EXPORTIN-T/LOS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19282">
        <property type="entry name" value="Exportin-T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08389">
        <property type="entry name" value="Xpo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10 13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-0675">Receptor</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 13" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="6 13" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Exportin-1/Importin-beta-like" evidence="14">
        <location>
            <begin position="104"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="Exportin-T C-terminal" evidence="15">
        <location>
            <begin position="322"/>
            <end position="974"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00032199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU366037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF08389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF19282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW11070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="986" mass="112124" checksum="AD7341DC9D8102C1" modified="2014-02-19" version="1">MDDLEKGILIMFDESGALDDDLKKQAKLYCNSIKEKPSICRLCIEKLCFSNLVQVQFWCLQTLHEVIRTRYLTMTPDERHMIRGSVFSIVCLEDKNLTRVLEGPAFIKNKLAQVLITLIYFDYPLVWSSVFVDFFPHLNKGNVVIDMFCRVLNALDDELISLDYPRTQEELTVASRIKDAMRQQCVSQIVRAWYDIVSMYRNSDQELCTSVLDSMRRYISWIDIGLIVNDAFIPLLFDLILVGSLSDQLRGAAVRCLSAVVSKRMEPQSKLSLLQSLHISRVVRLVTENDDAELVSDVAALLTGYAVEALDCFKRINSEDAKGISMELLSEVLPSIFYVMKNFEVDSTFNIIQFLSGYVSILKSFSPLREKQLLHLGQILEVILVLIRYNQAYRANLDVMDKIGKEEEDRMVEFRKDLFVLLRTVGRVAPDVTQMFIRNSLASAVSRSSNSNVEEVEGALSLLYALGESISEEAMKTGSGLLSELVLMLLSTKFPCHSNRPVALVYLETVTRYVKFIQDNTQYIPMVLAAFLDERGIHHSNINVSRRASYLFMRVVKLLKMKLVPFIETILQSLQDTVAQFTIMNYTAEELSGSEDGSHIFEAIGLLIGTEDVQPEKQSDYLSSLLSPLCQQVEALLINAKLLNVEEANAKIAVIQQIIMAINSLSKGFSERLVTASRPAIGLMFKQTLDVLLRVLVTFPKVEPLRNKVTSFIHRMVDTLGASVFPYLPKALEQLLEEIEPKQMVCFLLLLNQLICKFNTLVRDILEQIFPAVAERIFSVIPRNGLPSTGPDAITEEVRELQELQRTLYTFLHVITTHDLSPVFLVPKCKAYLDPVMQLLLFSSCNHKDILVRKACVQIFIRLIKDWCAQPYEEKVPGFRSFVIEAFATNCCFYSVLDRSFEFHDANTFVLFGEIVLAQKVMYEKFGDDFLVHFVSKGLSSAQCPQDLAEQYRQKLQSGDLKALKSFYQSVVENLRLQQNGSLVFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0R5</accession>
    <name>V7B0R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">K+ potassium transporter integral membrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G212800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0R5"/>
    <dbReference type="STRING" id="3885.V7B0R5"/>
    <dbReference type="Gramene" id="ESW10473">
        <property type="protein sequence ID" value="ESW10473"/>
        <property type="gene ID" value="PHAVU_009G212800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPSA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RYTHISK"/>
    <dbReference type="OrthoDB" id="504708at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901002">
        <property type="term" value="P:positive regulation of response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003855">
        <property type="entry name" value="K+_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053951">
        <property type="entry name" value="K_trans_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30540">
        <property type="entry name" value="OSMOTIC STRESS POTASSIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30540:SF94">
        <property type="entry name" value="POTASSIUM TRANSPORTER 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02705">
        <property type="entry name" value="K_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="196"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="239"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="320"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="K+ potassium transporter integral membrane" evidence="5">
        <location>
            <begin position="75"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="K+ potassium transporter integral membrane" evidence="5">
        <location>
            <begin position="237"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="8"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="387" mass="43139" checksum="4D879D76754C02E8" modified="2014-02-19" version="1">MSGAEGEAYGKKMKEEEVAAESGGRADAERKMKLKERKVSWSKLRRVDSLNLEAGRVSMVAQNSYEMGWRTTLCLAFQSIGVVYGDIGTSPLYVFSSIFTNGIIKHEDDILGVLSLIIYTITLLPFLKYVFIVLWANDNGNGGAFALYSLICRHMKMSLIPNEQPEDRELSNYRLETPSSQVKWVHKLKQKLEASLVSRVVLLFLAIVGTSMVIGDGILTPSISVLSAVSGISKSLGQVGIVFAPIILVWFFFIGGIGLYSLFKYDIRVLRAFYPKYIFDYFKRNGEDGWLSLGGVFLCITGSEALFADLGHFDVRSIQISFSCITYPTIVVAYIGQAAYLRKFPQNVANTFYACVPHPTSADKLNKCSYFKFTNAVIEPHLINTHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1D8</accession>
    <name>V7B1D8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Biotin carboxyl carrier protein of acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G053000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Plastid</location>
            <location evidence="7">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1D8"/>
    <dbReference type="SMR" id="V7B1D8"/>
    <dbReference type="STRING" id="3885.V7B1D8"/>
    <dbReference type="Gramene" id="ESW11707">
        <property type="protein sequence ID" value="ESW11707"/>
        <property type="gene ID" value="PHAVU_008G053000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUI2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTEESIT"/>
    <dbReference type="OrthoDB" id="196847at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06850">
        <property type="entry name" value="biotinyl_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.100:FF:000003">
        <property type="entry name" value="Acetyl-CoA carboxylase biotin carboxyl carrier protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050537">
        <property type="entry name" value="2-oxoacid_dehydrogenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001249">
        <property type="entry name" value="AcCoA_biotinCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00531">
        <property type="entry name" value="BCCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43416:SF38">
        <property type="entry name" value="BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43416">
        <property type="entry name" value="DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01071">
        <property type="entry name" value="ACOABIOTINCC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="Single hybrid motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0092">Biotin</keyword>
    <keyword evidence="7" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="5 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-0934">Plastid</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="9">
        <location>
            <begin position="185"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="56"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="152"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="157"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW11707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="262" mass="28042" checksum="7AAAADEA0549E2BF" modified="2014-02-19" version="1">MASSSLPPATKATTNFPLTHSFRLSPKPNNLRFPPTKPGNSLSFTRFKAQLNEVALDSSSNATPIKAKSDEEQPSKPSAEPSSVLATQESVSQFITQVASLVKLVDSRDIVELKMKQYDIELTIRKKEAMPELQPAPQPTVVYSPLPPMMSPPPVAPTSSPTTSVAHPTATPTSPPALKSTKSSVPPLKSPMAGTFYRSPGPGEPAFVEVGDKVKKGQVVCIIEAMKLMNEIEAEESGTIVEILAEDAKPVSLDTPLFVIEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3F9</accession>
    <name>V7B3F9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Pulmonary surfactant-associated protein B</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Pulmonary surfactant-associated proteolipid SPL(Phe)</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G0847000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3F9"/>
    <dbReference type="STRING" id="3885.V7B3F9"/>
    <dbReference type="Gramene" id="ESW12100">
        <property type="protein sequence ID" value="ESW12100"/>
        <property type="gene ID" value="PHAVU_008G0847000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1340">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMCHRAI"/>
    <dbReference type="OrthoDB" id="69496at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.225.10:FF:000008">
        <property type="entry name" value="Pulmonary surfactant-associated protein B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.225.10">
        <property type="entry name" value="Saposin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007856">
        <property type="entry name" value="SapB_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008138">
        <property type="entry name" value="SapB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011001">
        <property type="entry name" value="Saposin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008139">
        <property type="entry name" value="SaposinB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051428">
        <property type="entry name" value="Sphingo_Act-Surfact_Prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11480">
        <property type="entry name" value="SAPOSIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11480:SF80">
        <property type="entry name" value="SAPOSIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05184">
        <property type="entry name" value="SapB_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03489">
        <property type="entry name" value="SapB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00741">
        <property type="entry name" value="SapB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47862">
        <property type="entry name" value="Saposin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50015">
        <property type="entry name" value="SAP_B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 13" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0865">Zymogen</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754414" description="Pulmonary surfactant-associated protein B" evidence="13">
        <location>
            <begin position="22"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="Saposin B-type" evidence="14">
        <location>
            <begin position="36"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Saposin B-type" evidence="14">
        <location>
            <begin position="122"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00037221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00041094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00041785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW12100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="24826" checksum="352F0919CE9BEE91" modified="2014-02-19" version="1" fragment="single">MEGRMTLLFLLVLGAAWVCDARELANRDHFIKLIRKPDACALCEEYTAKALNYLNGNKTQQEIIDILHNTCHQLPRLHQKCIILVDYYAPLFFLEMATIQPEDFCNKINICHLISYISSQVQEDSCGFCKDTVSTLLAKLKDSDTKLEIIETTLKVCNSVEKYANKCTRMVLENGPLVFDSAQRFLESTDMCTAVYVLQIFNSGWPTSLSLRLLWKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3S1</accession>
    <name>V7B3S1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="22">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_008G122200g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3S1"/>
    <dbReference type="SMR" id="V7B3S1"/>
    <dbReference type="STRING" id="3885.V7B3S1"/>
    <dbReference type="Gramene" id="ESW12547">
        <property type="protein sequence ID" value="ESW12547"/>
        <property type="gene ID" value="PHAVU_008G122200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQEU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NGHDSCF"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042277">
        <property type="term" value="F:peptide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001653">
        <property type="term" value="F:peptide receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033612">
        <property type="term" value="F:receptor serine/threonine kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010078">
        <property type="term" value="P:maintenance of root meristem identity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000280">
        <property type="term" value="P:regulation of root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010082">
        <property type="term" value="P:regulation of root meristem growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000276">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RCH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000333">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RCH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:002654">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase RCH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000775">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000517">
        <property type="entry name" value="probable LRR receptor-like serine/threonine-protein kinase At1g34110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000457">
        <property type="entry name" value="Probable LRR receptor-like serine/threonine-protein kinase At1g34110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025875">
        <property type="entry name" value="Leu-rich_rpt_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050647">
        <property type="entry name" value="Plant_LRR-RLKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056:SF5">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12799">
        <property type="entry name" value="LRR_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00365">
        <property type="entry name" value="LRR_SD22"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="16" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="15 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 21" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="13" id="KW-0832">Ubl conjugation</keyword>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="749"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="810"/>
            <end position="1105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="1129"/>
            <end position="1153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="20">
        <location>
            <begin position="1129"/>
            <end position="1140"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="849"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW12547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1153" mass="125588" checksum="D1DA20411873B23E" modified="2014-02-19" version="1">MLVVEFLRELPMSMPRQALSNQNHNQMSRQAFITNHHHHPHLQHLHYVLLFALLVPLSFAANDEVTALVSWMHISSKTPSAFSSWNPLDSNPCSWSYIKCSSANLVLEITIQNVELALPFPSKISSFPFLQILVISGANLTGTISPDIGNCSELRVLDLSSNSLVGVIPSSIGRLKNLQSLSLNSNHLTGQIPSELGDCVNLKTLDIFDNSLSGDLPVELGKLSNLEVIRAGGNSGIVGKVPDELGDCRNLTVLGLADTKISGSLPASLGRLSRLQTLSIYGSMISGEIPPEIGNCSELVNLFLYENDLSGSLPREIGMLQKLEKMLLWQNNFVGDIPEEIGNCGKLKILDVSLNSLSGGIPRSLGKLSNLEELMLSNNNISGSIPPALSNLTNLVQLQLDTNQLSGSIPPGLGSLAKLTVFFAWQNKLEGPIPSSLGGCRSLEALDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEIGNCSSLIRLRLVDNRISGEIPREIGFLNSLYFLDLSENQLTGSVPLEIGNCKELQMLNLSNNSLSGALPSYLSSLTRLEVLDVSMNNFSGEVPMSIGQLTSLLRVILSRNSFSGPIPSSIGQCSGLQLLDLSSNNFSGSIPPELLQIEALDISLNLSHNALSGVIPPEISSLKKLSVLDLSHNNLEGDLMAFSGLENLVSLNISYNKITGYLPDSKLFHQLSATDLAGNQGLCPNGHDSCFVSSAAITKMLNGTNSKRSEIIKLAIGLLSALIVAMTIFGVVTIFRARKIIQADNDSEMGGDSWPWQFTPFQKVNFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDIIAVKRLWPTTIAAAKCDNQSDKLAVNGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMSNGSLGSLLHERSGNCLEWDIRFRIILGAAQGVAYLHHDCAPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGVEVVDESLRARPESEIEEMLQTLGVALLCVNSSPDDRPTMKDVVAMMKEIRQEREEYVKVDMLLHASSANDQQDKNLSNEEPMSMISTSNTNLHLHYSPHRPQTPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5L7</accession>
    <name>V7B5L7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4283 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G175000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5L7"/>
    <dbReference type="Gramene" id="ESW13187">
        <property type="protein sequence ID" value="ESW13187"/>
        <property type="gene ID" value="PHAVU_008G175000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="221" mass="25832" checksum="F60B92FC8480BF0A" modified="2014-02-19" version="1">MPRRLDARIKRFGFVRFQCVKDVEVLERRLDSVWIGLWKAQVNKPRYERREVHMKERVSWKCSSALRKFLYQKVQFQGVDTKATKSGSVSYAQAVKNGGTSVSQEDMGKEDVGQESRVPFFFVKSEVPKWLEHSYVGRLSKASDIRVVQESFIMGGLNFVRVLLSSYTEGSIENILEEHKEWLDDIFDSIVPWVESFEVTKKLVWIRCRGIPLKFLEYPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6C7</accession>
    <name>V7B6C7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G169100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6C7"/>
    <dbReference type="STRING" id="3885.V7B6C7"/>
    <dbReference type="Gramene" id="ESW13115">
        <property type="protein sequence ID" value="ESW13115"/>
        <property type="gene ID" value="PHAVU_008G169100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQD9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MTMLDSN"/>
    <dbReference type="OrthoDB" id="644067at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14707">
        <property type="entry name" value="bZIP_plant_BZIP46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043452">
        <property type="entry name" value="BZIP46-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952:SF482">
        <property type="entry name" value="ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952">
        <property type="entry name" value="CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BZIP" evidence="5">
        <location>
            <begin position="227"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="197"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="200"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="236"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="299" mass="34031" checksum="159F05100BE15E44" modified="2014-02-19" version="1">MARRIMGFSPNRAQDPQYPPMVRQSSLYNLTFDEVESQLGNTEKPIHDMSLDDFHKSVISAESGQLVQTSSNHHSFTLGNMSNGMHDTKNGISEGWRGIVDQEHMNRCVDTLLKQPTLGESSSLEHLLANNVADQNANVHTTTPMVIDPIHQQHWLQIPSINTHQSPHEPQMIGNSQDFNVSKSFYDSQLSYSENSVGVSLSPSYSDSKSPLFGKRKQSNETLEKAVERRQKRMAKNRESAARSRAKKQEHIHRLENEKCRLQKVNSWLKQLKELDAKLFSSTTPTPRYQLRRSSSTNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6Z0</accession>
    <name>V7B6Z0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G127900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6Z0"/>
    <dbReference type="STRING" id="3885.V7B6Z0"/>
    <dbReference type="Gramene" id="ESW12618">
        <property type="protein sequence ID" value="ESW12618"/>
        <property type="gene ID" value="PHAVU_008G127900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYTW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RIIVITC"/>
    <dbReference type="OrthoDB" id="1900471at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055294">
        <property type="entry name" value="FBL60-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31293">
        <property type="entry name" value="RNI-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31293:SF12">
        <property type="entry name" value="RNI-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="21"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="F-box/LRR-repeat protein 15/At3g58940/PEG3-like LRR" evidence="2">
        <location>
            <begin position="112"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF24758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW12618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="275" mass="30454" checksum="9F4BE846445C45B5" modified="2014-02-19" version="1">MVESSQPPSKQRSLPGGDDRISQLPDVLLLQILSLLSTKQAVVTGILAKRWRPLWPAVSVLDLDDESSPDSRHGSAGFAEFVYSVLLLHDAPAIERFRLRCANPNSSACDIATWLCHVARRRVECVELSLSLSRYVALPRRLFNCDTVSAMKLNGVFLNALASFSVRLPLLRALHVGDRVLFGCHDYLVKLLSGCPALEDLVLESTYNDACGGVVCAEGNFELSLKHLSRAKIGFSWKERCLKSMLLIFQALSHVRCLSLSPCTVAFNCFLHKRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9D6</accession>
    <name>V7B9D6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable magnesium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G199900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Early endosome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the NIPA (TC 2.A.7) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9D6"/>
    <dbReference type="Gramene" id="ESW13478">
        <property type="protein sequence ID" value="ESW13478"/>
        <property type="gene ID" value="PHAVU_008G199900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2922">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PMVYISI"/>
    <dbReference type="OrthoDB" id="6428174at2759"/>
    <dbReference type="PhylomeDB" id="V7B9D6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005769">
        <property type="term" value="C:early endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015095">
        <property type="term" value="F:magnesium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008521">
        <property type="entry name" value="Mg_trans_NIPA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12570:SF19">
        <property type="entry name" value="MAGNESIUM TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05653">
        <property type="entry name" value="Mg_trans_NIPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 8" id="KW-0967">Endosome</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="48"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="71"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="216"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="240"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="327"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW13478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="37699" checksum="3CE1FFC04957CBC1" modified="2014-02-19" version="1">MGLSKENLKGLILALVSSGFIGASFIIKKQGLRRAAAASGVRAGVGGYYYLLEPLWWVGMITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLADFILKEKLHNLGILGCVMCIAGSIIIVIHAPKEQPIKSVLEIWNMATQPAFLAYVGSVIVLVFILVFHFAPRCGHTNVLVFTGICSLMGSLSVMSVKALGTSLKLTFEGKNQLIYPETWFFMLVVAICVIMQMNYLNKALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWDGQSGGTIVSEICGFVVVLSGTVMLHATKDFERGHSFRGTGPSSPTLSTRLYTGNGDFLAKQDEESGSPDSSVCSRRQESY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9S6</accession>
    <name>V7B9S6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Large ribosomal subunit protein uL30m</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G212200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9S6"/>
    <dbReference type="SMR" id="V7B9S6"/>
    <dbReference type="STRING" id="3885.V7B9S6"/>
    <dbReference type="Gramene" id="ESW13623">
        <property type="protein sequence ID" value="ESW13623"/>
        <property type="gene ID" value="PHAVU_008G212200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1TX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHRAVRP"/>
    <dbReference type="OrthoDB" id="509901at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01658">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1390.20:FF:000007">
        <property type="entry name" value="50S ribosomal protein L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="entry name" value="Ribosomal protein L30, ferredoxin-like fold domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01371_B">
        <property type="entry name" value="Ribosomal_uL30_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="Ribo_uL30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005996">
        <property type="entry name" value="Ribosomal_uL30_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016082">
        <property type="entry name" value="Ribosomal_uL30_ferredoxin-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01308">
        <property type="entry name" value="rpmD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15892:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL30M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15892">
        <property type="entry name" value="MITOCHONDRIAL RIBOSOMAL PROTEIN L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00327">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="Ribosomal protein L30p/L7e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL30-like ferredoxin-like fold" evidence="6">
        <location>
            <begin position="20"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="107" mass="12533" checksum="1E7CBFBCFE02F49F" modified="2014-02-19" version="1">MNAFKAYKACVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRGMLQQVKRLIVIETEEMFKARKQKEETHRALRPPLVISHKPPSLTDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9T7</accession>
    <name>V7B9T7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G177500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9T7"/>
    <dbReference type="SMR" id="V7B9T7"/>
    <dbReference type="STRING" id="3885.V7B9T7"/>
    <dbReference type="Gramene" id="ESW13216">
        <property type="protein sequence ID" value="ESW13216"/>
        <property type="gene ID" value="PHAVU_008G177500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSWD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WHEDGSS"/>
    <dbReference type="OrthoDB" id="684567at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11448">
        <property type="entry name" value="bHLH_AtFAMA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000050">
        <property type="entry name" value="Basic helix-loop-helix transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11969">
        <property type="entry name" value="MAX DIMERIZATION, MAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11969:SF82">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH96"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="118"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="57"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="57"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="100"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="316" mass="35440" checksum="D80CD91B3512BD3B" modified="2014-02-19" version="1">MALEAVVFPQDPFTYPCNKDYFYSLLQNNFQQVENKAFVGIITNNIDHTLHANWDSSSPSALQNVKDQWDSHSSPEPCTVDQSLPAAFPPPPSSTEPTTGRRKRRRTKSTKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQCLKGQQRTKENVGGFDSSPFAEFFMFPQYSTRATQNSRGYPSTCEARNHSWAVADIEVTLVDGHANIKILTKKLPGLLLKMVVGLQTLAFTILHLNVTTVDDMVLTSVSVKIEEGCEAKTVDEIAGAVHELSQRIQEEAVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB05</accession>
    <name>V7BB05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TIP41-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G041700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TIP41 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB05"/>
    <dbReference type="SMR" id="V7BB05"/>
    <dbReference type="STRING" id="3885.V7BB05"/>
    <dbReference type="Gramene" id="ESW15072">
        <property type="protein sequence ID" value="ESW15072"/>
        <property type="gene ID" value="PHAVU_007G041700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3224">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DMILFED"/>
    <dbReference type="OrthoDB" id="10253878at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031929">
        <property type="term" value="P:TOR signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051330">
        <property type="entry name" value="Phosphatase_reg/MetRdx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007303">
        <property type="entry name" value="TIP41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21021">
        <property type="entry name" value="GAF/PUTATIVE CYTOSKELETAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21021:SF16">
        <property type="entry name" value="TIP41-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04176">
        <property type="entry name" value="TIP41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="289" mass="33017" checksum="48FA96DF80202C69" modified="2014-02-19" version="1">MMDLEVDENNLKAAGAELFAEDGRRGIRINGWLIETRRHSILKSSTIQEWEQKLNTSHLPEMVFGENTLILRHLSSGTKIHFNAFDALCGWKQEALPPVEVPAAAKWKFRSKPSQQIILDYDYTFTTPYCGSDNIEIDKDLNEGEISKETSNILWEDCKDQIDVAALASKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRETRMHCVFGGNTNPIILRESCWRESTFQALSAQEHPFDSGAYGDPSFISQKLPIIMHTTKKFVISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBM8</accession>
    <name>V7BBM8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G266800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RutC family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBM8"/>
    <dbReference type="STRING" id="3885.V7BBM8"/>
    <dbReference type="Gramene" id="ESW14268">
        <property type="protein sequence ID" value="ESW14268"/>
        <property type="gene ID" value="PHAVU_008G266800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2317">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="309640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019239">
        <property type="term" value="F:deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00448">
        <property type="entry name" value="YjgF_YER057c_UK114_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="entry name" value="RutC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019897">
        <property type="entry name" value="RidA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803:SF45">
        <property type="entry name" value="PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="YjgF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01094">
        <property type="entry name" value="UPF0076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="177" mass="18653" checksum="67F9045C79A08C86" modified="2014-02-19" version="1">MASWCGVRSFQIPAMEGGALRNRASLAAGVGSLSVGGTSFWRSSLSPNGSLPFKRLSISADAGVKEIVQSDGAPEALGPYSQAIKSGNLIFVSGGLGLVPEILKNLGEILKSGGADYSSVVKTTICMNSLLADLKDFNIVNEIYAKYFPYPYPARSTYQVAALPKDAKIEIECIATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC24</accession>
    <name>V7BC24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_008G245900g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="18" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC24"/>
    <dbReference type="SMR" id="V7BC24"/>
    <dbReference type="Gramene" id="ESW14016">
        <property type="protein sequence ID" value="ESW14016"/>
        <property type="gene ID" value="PHAVU_008G245900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW14017">
        <property type="protein sequence ID" value="ESW14017"/>
        <property type="gene ID" value="PHAVU_008G245900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT13">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTQDNSS"/>
    <dbReference type="OrthoDB" id="69842at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000431">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000731">
        <property type="entry name" value="Leucine-rich repeat receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000307">
        <property type="entry name" value="pollen receptor-like kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000095">
        <property type="entry name" value="protein STRUBBELIG-RECEPTOR FAMILY 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050994">
        <property type="entry name" value="At_inactive_RLKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48010">
        <property type="entry name" value="OS05G0588300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48010:SF59">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="10 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-0675">Receptor</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="359"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="308"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="629"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="322"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="396"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00038349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW14016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="655" mass="71813" checksum="128760BADC3EFBE4" modified="2014-02-19" version="1">MADITSNSSVNISYLITKKLSMKFYFPRVHPFLFIIVILCPMVFADLSSDKQALLDFAAAVPHRRDLKWNPATSICTSWVGVTCNPNGTRVVSVRLPGIGLVGTIPANTLGKIDSLKNISLRANLLSGSLPPDISSLPSLEYLYLQHNNLSGNIPTSLSTHLNVLDLSYNCFTGAIPKTLQNLTQLTRLNLQNNSLSGEIPNLNVTKLRHLNLSYNHLNGSIPAALQTFPNSSFEGNSLCGLPLKSCSLVPPAPSPLSPSPPSPSRHSSKSKLSKAAIIAIAVGGGVLLLLLVALIIFLCCLKKKNDGSPRATKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVRRVGQHPNVVPLRAYYYSKDEKLLVYDYIPNGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFTHGNVKSSNVLLNQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPTMEEVARMIEEIRLSDSENRPSSEENRSKEESTAQTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCH8</accession>
    <name>V7BCH8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G081000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCH8"/>
    <dbReference type="SMR" id="V7BCH8"/>
    <dbReference type="STRING" id="3885.V7BCH8"/>
    <dbReference type="Gramene" id="ESW15544">
        <property type="protein sequence ID" value="ESW15544"/>
        <property type="gene ID" value="PHAVU_007G081000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXGY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNQVEMV"/>
    <dbReference type="OrthoDB" id="644067at2759"/>
    <dbReference type="PhylomeDB" id="V7BCH8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14707">
        <property type="entry name" value="bZIP_plant_BZIP46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000036">
        <property type="entry name" value="ABSCISIC ACID-INSENSITIVE 5-like protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043452">
        <property type="entry name" value="BZIP46-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952">
        <property type="entry name" value="CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952:SF184">
        <property type="entry name" value="G-BOX-BINDING FACTOR 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BZIP" evidence="6">
        <location>
            <begin position="158"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="179"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="17"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="240" mass="26921" checksum="E6874471B3E8A3F1" modified="2014-02-19" version="1">MASSKLMASSHSRKSESSSPSPTPQFTTTNFIPISDAAVTAAPKTVDDVWREIVAGDRRECKEEAPDDEMMTLEDFLAKAGAVNDDDNEEVDCDIKMPMPLTERLGSGVFAFDPLLAATPFQDGVEGSVIGFGNGLEVVEGGRGKRARPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVLPIAQKQRPPCTLRRARSLQW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCN5</accession>
    <name>V7BCN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G064300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCN5"/>
    <dbReference type="SMR" id="V7BCN5"/>
    <dbReference type="STRING" id="3885.V7BCN5"/>
    <dbReference type="Gramene" id="ESW15335">
        <property type="protein sequence ID" value="ESW15335"/>
        <property type="gene ID" value="PHAVU_007G064300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1BU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFIDICE"/>
    <dbReference type="OrthoDB" id="1935281at2759"/>
    <dbReference type="PhylomeDB" id="V7BCN5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090575">
        <property type="term" value="C:RNA polymerase II transcription regulator complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000977">
        <property type="term" value="F:RNA polymerase II transcription regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18914">
        <property type="entry name" value="bHLH_AtORG2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000085">
        <property type="entry name" value="Transcription factor bHLH126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015660">
        <property type="entry name" value="MASH1/Ascl1a-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13935:SF106">
        <property type="entry name" value="ACHAETE-SCUTE COMPLEX PROTEIN T5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13935">
        <property type="entry name" value="ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="73"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="245" mass="27794" checksum="B4D62CFC8CBCFCC2" modified="2014-02-19" version="1">MFPLQRGNELVIQFSNGLQPQHKISKDLLLDDHNIDNSPLVAYSDKKLRTSHPNKLFYAPETSHENSTQEESAKKMVHREIERKRRQEMATLHASLRSLLPLSFIKGKRSISDQMSETVNYINHLQKNIKELSDKRDKLKKKLPINSTLESRQNKHESSGFTVHQNSSGAVGIEISGFSEEGVSLSKLLELVLEEGLEVVCCLSTKVNGRLLHSLQCEVENSDSVDLSELRRKFSNVIASFRVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDP9</accession>
    <name>V7BDP9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">CBM20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G001400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDP9"/>
    <dbReference type="STRING" id="3885.V7BDP9"/>
    <dbReference type="Gramene" id="ESW14596">
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        <property type="gene ID" value="PHAVU_007G001400g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="6123450at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
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        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001070">
        <property type="term" value="F:starch binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Carb-bd-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002044">
        <property type="entry name" value="CBM20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054481">
        <property type="entry name" value="GWD1_pHisD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47453">
        <property type="entry name" value="PHOSPHOGLUCAN, WATER DIKINASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47453:SF1">
        <property type="entry name" value="PHOSPHOGLUCAN, WATER DIKINASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00686">
        <property type="entry name" value="CBM_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22973">
        <property type="entry name" value="GWD1_pHisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01065">
        <property type="entry name" value="CBM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49452">
        <property type="entry name" value="Starch-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51166">
        <property type="entry name" value="CBM20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CBM20" evidence="9">
        <location>
            <begin position="77"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="54"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="814"/>
            <end position="834"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="71"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="815"/>
            <end position="834"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="952" mass="105784" checksum="D3AF4961922C8077" modified="2014-02-19" version="1">MDSLRVYASTIRPCFCACAHPSTLSTSSYKTHLRFLLPSLPPLRPLHLRLSPPLSAVSSPESQTRDEQQQEGDNNPSSVSMDRKVRLQVRLDHQVQFGDHVAIRGSTKELGSWKTNVPLSWTKNGWVCLLEFKGTDHIEFKFITVKKDSTMVWEAGQNRVLKLPVAGHFTTVATWDATQTNLELHPLDEQLQLQVQGEEGKPYDGATSSVSETAEASPFVGQWQGKPVSFMRSNDHRTHETQMKWDTSGLHGLPLKFVQADQNARNWWRKLDIVRDIIAGGLQGEDRLEALLYSAIYLKWINTGQITCFEDGGHHRPNRHAEISRLIFRELERHTARKDISPQEVLVIRKIHPCLPSFKAEFTASVPLTRIRDIAHRNDIPHDLKLQIKHTIQNKLHRNAGPEDLVATEAMLAKITKNPGEYSEPFVKEFKIFHLELKDFFNAGSLAEQLESIRESMDEYGISALNSFLECKKNMDAASESNAAREDVNKLLFKTMESLNVLRETIVKGLESGLRNDAPDSAIAMRQKWRLCEIGLEDYSFVLLSRFLNELEVLGGASWLAANVQSKNVNLWNDSLGALIIGIHQLKLSGWKPEECGCIENELIAWSKRGLSEREGNEDGKTIWSLRLKATLDRSKRLTDEYTEELLKIFPQKVQILGKALGIPENSVRTYTEAEIRAGVIFQVSKLCTVLLKAVRSTLGSQGWDVLVPGAASGKLVQVERIVPGSLPSSVEGPIILVVNRADGDEEVTAAGRNIVGVILQQELPHLSHLGVRARQEKVVFVTCEDEEKVVDIQRLIGSYVRLEASTAGVNLKLSSSMDTDDNSSMRSSSDDNVSGVEVPSFSFSRISNFDQGASSAGVILLPDAEIQTSGAKAAACGLLSSVSEVSDKVHSDQGVPALFRVPSGAVLPFGSMELELERSNSTETFRSILEKIETAKLEGGEQKVVTINSRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG70</accession>
    <name>V7BG70_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Rho termination factor-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G192400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG70"/>
    <dbReference type="SMR" id="V7BG70"/>
    <dbReference type="STRING" id="3885.V7BG70"/>
    <dbReference type="Gramene" id="ESW16884">
        <property type="protein sequence ID" value="ESW16884"/>
        <property type="gene ID" value="PHAVU_007G192400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ4E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRIKFQP"/>
    <dbReference type="OrthoDB" id="652255at2759"/>
    <dbReference type="PhylomeDB" id="V7BG70"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011112">
        <property type="entry name" value="Rho-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34449:SF5">
        <property type="entry name" value="ATP BINDING _ ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34449">
        <property type="entry name" value="RHO TERMINATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07498">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rho termination factor-like N-terminal" evidence="2">
        <location>
            <begin position="337"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="181"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="77"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="146"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="195"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="214"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="229"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="274"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="373" mass="41379" checksum="1CA8A2BD4EA97357" modified="2014-02-19" version="1">MSQTLHPLLAKNLGCGMTEGKCLPCSGVSGRTAAVYSYSSLGHHIIHSHVKVRGLKCGFRGASVLCEAKRNPDFSRQNKHGHSRGRNRTNDGRESFESFDDDMFSLKNGPPLSLSTSGKFHSTSAPGPREKEIVELFRKVQARLRERAASKEEKKVEASRVQTKDNSTVDSLLKLLKKHSVEQVKRSSGGARGNDLSSDQLQDSNQYDGGRNTKFSDFDSIPKDEPQEGQVSSSVTRPRSSFQRRSPVPRVKYQPVPINEDDMNVLPVGSEDGENSHDQIDLKHDDEPEPDSELDIDSKDELFFPNIGIAALSEDDDFEQTNNDESVEEQPAVQHEDLSALKLSELRVVAKSRGLKGFSKMKKSDLLELLTES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHW6</accession>
    <name>V7BHW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G159500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHW6"/>
    <dbReference type="SMR" id="V7BHW6"/>
    <dbReference type="STRING" id="3885.V7BHW6"/>
    <dbReference type="Gramene" id="ESW16473">
        <property type="protein sequence ID" value="ESW16473"/>
        <property type="gene ID" value="PHAVU_007G159500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSHY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTDPHPW"/>
    <dbReference type="OrthoDB" id="1925259at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022212">
        <property type="entry name" value="DUF3741"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032795">
        <property type="entry name" value="DUF3741-assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46836">
        <property type="entry name" value="AFADIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46836:SF8">
        <property type="entry name" value="AFADIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12552">
        <property type="entry name" value="DUF3741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14383">
        <property type="entry name" value="VARLMGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3741" evidence="4">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3741" evidence="2">
        <location>
            <begin position="179"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4378" evidence="3">
        <location>
            <begin position="796"/>
            <end position="943"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="433"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="569"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="447"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="569"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW16473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="947" mass="105765" checksum="91284C35B6AF8A22" modified="2014-02-19" version="1">MEKFRNSKHQPPLPQAPGNKQVHRQRLPPNLSPDSCSDGGVVADKDSFSFKFGWRSSKQLLGTPIKKLLDEEMSPKSDTKRRSPGVIARLMGLDGLPFQQPISKQHKGLSENQKTPQLQKTRGKGVPYDGGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKANDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQADPVKSHYGDVETMDIEKYEHEHDLSWRSDREKTGLNYNRSHENHLDGYPCHFDKRHVMHSSPRSSKLQFQGRHEQDAVPTKIVLLKPNLGKVQNGTRIVSSPCSHNFLSGREKDTELCQVTNMPESARSWRQDSFESREIAKEITRQMRNSLNNSGMMLSTSRIAGYAGDDSSCSFSGNESPDVSGEITAILGNSFDLNNRTRRSSRSGESSVSKEAKKRLSERWKMTHKSQELQGISRSSTLAEMLAIPDKELKAANFAGMATGEGFRDKFTPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRRFLRTEALRADRYMVPKEAHKRERRAAKNFDHRHGNNRNSRSGHKKSWSLHSSKLEVDEFCADSHTVQNKMNIILEDSPKLEVPSAVADEDMEVTNGKVESSEPLNKVLPELSSHVLIEGDGGAVDKDNSIQQDLSAASTGVTVNHETPVPGLESSCCKDADQPSPVSILEPAFTDDLSSCSECFESLNADLQGLRMQLQLLKLESEDYVEGPMTVSDEDGEEVSPGMLAADKGLCLRTEDSWECSYIIDVLSESGIDGVHLDTILEVWHSLECPVSLSVFDELEERYSDGTACSRSQRRLLFDNINIGILKISEQFSFSRSAIRNAIGSNLTKKGFRDGLLRMLVDEGKVRDGGQGNVVVGESEWMDLKVYIDTIAREVERSLLDDLVAEIIGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIM5</accession>
    <name>V7BIM5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G150200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIM5"/>
    <dbReference type="STRING" id="3885.V7BIM5"/>
    <dbReference type="Gramene" id="ESW16361">
        <property type="protein sequence ID" value="ESW16361"/>
        <property type="gene ID" value="PHAVU_007G150200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S10P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEECCER"/>
    <dbReference type="OrthoDB" id="1840940at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374">
        <property type="entry name" value="AUXIN-INDUCED PROTEIN-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374:SF9">
        <property type="entry name" value="AUXIN-RESPONSIVE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="122" mass="14013" checksum="CD39CB77D6676F34" modified="2014-02-19" version="1">MKSRFLRGCLNKCKKMCLNKCISCEECCERAWWSSLHEGCSNIPSDVPKGHLVVYVGENHKRYVIKIGLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ71</accession>
    <name>V7BJ71_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">FAM91 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G009100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FAM91 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ71"/>
    <dbReference type="STRING" id="3885.V7BJ71"/>
    <dbReference type="Gramene" id="ESW18049">
        <property type="protein sequence ID" value="ESW18049"/>
        <property type="gene ID" value="PHAVU_006G009100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW18050">
        <property type="protein sequence ID" value="ESW18050"/>
        <property type="gene ID" value="PHAVU_006G009100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3707">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYESFPF"/>
    <dbReference type="OrthoDB" id="275996at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039199">
        <property type="entry name" value="FAM91"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028097">
        <property type="entry name" value="FAM91_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028091">
        <property type="entry name" value="FAM91_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28441">
        <property type="entry name" value="PROTEIN FAM91A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28441:SF2">
        <property type="entry name" value="PROTEIN FAM91A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14648">
        <property type="entry name" value="FAM91_C"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14647">
        <property type="entry name" value="FAM91_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAM91 N-terminal" evidence="3">
        <location>
            <begin position="17"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="FAM91 C-terminal" evidence="4">
        <location>
            <begin position="358"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="FAM91 C-terminal" evidence="4">
        <location>
            <begin position="557"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="domain" description="FAM91 C-terminal" evidence="4">
        <location>
            <begin position="782"/>
            <end position="854"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="496"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="499"/>
            <end position="517"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="998" mass="110874" checksum="4EA13DF3624E7A55" modified="2014-02-19" version="1">MQRAPVTVEEQLLQKAIKEECTWENLPKRIQVTLSSKEEWHRRIIESCIKKRLIWNSCFARKVCKESEYYEEMMRYLRKNLALFPYHLAEYICRVMRVSPFRYYCDMIFEVMRNEQPYDSIPNFSAADALRLTGIGRNEFIDIMNKCRSKKIMWKLNKSIAKELLPTQPVDFPIEPWWGVCLVNFTLEEFKKLSEEEMAMIDKLCKEEANSFILFDPDVVKGLYSRGLIYFDVPVYPEDRFKVSRLEGFVSNREQSYEDPIEELLYAVFVVSNENASVAELAATLQADLLQLQAAASFVCRLGWATKVIDPASILQDANIPGSPKSVISDEDASIASHGFDNMLTDNDNNQGDHSSYTRVAFIVDANITSYLMMGSVSPGLKSHAVTLYEAGKLDHAVIADLCKDLSTLEGAKFEGELQEFANHAFSLRCVLECLQSGGVASDAKVGEDKIDLATLGNDESSSPISEISSTDKYGDYGITEAGKNDYDILSSDLEKSVQPASTQATPSNMVSGTSSIAFDDDDSHIQDEASEDGKLQNDEKLVAEEADVGKEMLKKIKKYRVDILRCESLASLAPATLDRLFVRDYDVVLSIVPLPHSSVLPGSTGLVHFGPLSYSFMTPWMKLVLYSTVACGPLSVVLMKGQCLRLLPAPLVGCEKALIWSWDGSTVGGLGGKHEGNLVKGSILLHCLNSLLKHSAVLVQPLSRFDLDEFGKVTTMDIPLPLKNFDGSITAVGKELGICEGECSQLNSLLTDLADKMELPTIGYIRLLKLFIGRESDQFAPEGEKYEWVPLSAEFGIPLFSPKLCRNICQRVVSSQLLQSGSFEEHHHAMQSLRKNLHDMCAEYQATGPAAKVLYLKQKAKGSPRQLMNYASGKWNPLVDPSSPIAGASSEHRRLKLANRQRCRTEVLSFDGSILRSYALTPVYEASTRPIEEETQGNTLKAETDESDSKEVILPGVNLIFDGSELHPFDIGACLHARQPISLIAEATAASASLAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKH7</accession>
    <name>V7BKH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Expansin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G207600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Secreted</location>
            <location evidence="7">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the expansin family. Expansin A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKH7"/>
    <dbReference type="SMR" id="V7BKH7"/>
    <dbReference type="Gramene" id="ESW17071">
        <property type="protein sequence ID" value="ESW17071"/>
        <property type="gene ID" value="PHAVU_007G207600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS90">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CDSTKVP"/>
    <dbReference type="OrthoDB" id="5823761at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009653">
        <property type="term" value="P:anatomical structure morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009664">
        <property type="term" value="P:plant-type cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22274">
        <property type="entry name" value="DPBB_EXPA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.40.10:FF:000001">
        <property type="entry name" value="Expansin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.760:FF:000001">
        <property type="entry name" value="Expansin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.760">
        <property type="entry name" value="Expansin, cellulose-binding-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="entry name" value="RlpA-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007118">
        <property type="entry name" value="Expan_Lol_pI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002963">
        <property type="entry name" value="Expansin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007112">
        <property type="entry name" value="Expansin/allergen_DPBB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007117">
        <property type="entry name" value="Expansin_CBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036749">
        <property type="entry name" value="Expansin_CBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009009">
        <property type="entry name" value="RlpA-like_DPBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31867">
        <property type="entry name" value="EXPANSIN-A15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03330">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01357">
        <property type="entry name" value="Expansin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01226">
        <property type="entry name" value="EXPANSIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01225">
        <property type="entry name" value="EXPANSNFAMLY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00837">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="Barwin-like endoglucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49590">
        <property type="entry name" value="PHL pollen allergen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50843">
        <property type="entry name" value="EXPANSIN_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50842">
        <property type="entry name" value="EXPANSIN_EG45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0134">Cell wall</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015216614" description="Expansin" evidence="7">
        <location>
            <begin position="26"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like EG45" evidence="8">
        <location>
            <begin position="45"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Expansin-like CBD" evidence="9">
        <location>
            <begin position="170"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="27509" checksum="03783081D051FBE3" modified="2014-02-19" version="1">MQKLVFSGLILLVVLFTTELRVASAGWLQAHATFYGGSDASGTMGGACGYGNLNTDGYGIKTAALSTALFNDGKSCGGCYQIVCDANQVPQWCLKGTSITITATNFCPPNYALPSDNGGWCNPPRPHFDMSQPAFEMIAKYKAGIVPIFYRKVGCKRSGGIRFTINGKDYFQLVLISNVGGAGDISLVWIKGSKMSNWESMSRNWGSNWQSLSYLNGQSLSFRVQLSNGKTLTANDLAPSNWRFGQSFISKVQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BP67</accession>
    <name>V7BP67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G153100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BP67"/>
    <dbReference type="SMR" id="V7BP67"/>
    <dbReference type="STRING" id="3885.V7BP67"/>
    <dbReference type="Gramene" id="ESW19757">
        <property type="protein sequence ID" value="ESW19757"/>
        <property type="gene ID" value="PHAVU_006G153100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TDGYPSF"/>
    <dbReference type="OrthoDB" id="1882431at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000041">
        <property type="entry name" value="Basic 7S globulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000096">
        <property type="entry name" value="Basic 7S globulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965:SF44">
        <property type="entry name" value="7S GLOBULIN 2 SMALL SUBUNIT, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965">
        <property type="entry name" value="ASPARTYL PROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754592" description="Peptidase A1 domain-containing protein" evidence="5">
        <location>
            <begin position="22"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="6">
        <location>
            <begin position="48"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="433" mass="46188" checksum="4D8A9073AE6A546D" modified="2014-02-19" version="1">MSSSFAIHFFLISIPLFSVCCLSASHAPSTKPHPFILPIKKDPATNLFYTSVGVGTPRHNFDLTIDLAGENLWYDCNTHYNSSSYRPIACGSKQCPDVGCVGCNGPFKPGCTNNTCPANTINPLAKFIFGGGLAEDFIFIVQQKVSGLLSSCIDTDGFTSFTNDESPLNGLPKNSRGIIGLSRSQFALPIQLASANKLPSKFSLCLPSLNHQGFTNLLVGTGEYPQGISKFLQTTPLIVNPISTGPISVDGVASNEYFIDVKAVKIDGHVVNLKPSLLSIDKKGNGGTKISTMSPFTELQTSVYKPFLRDFLKKASDIRLKKVAAVAPFEACFDSTKIGNSATGLVVPTIDLVLQGGAQWSIHGANSMVMAKENVACLAFVDGGTEPVMSFVKASIVIGGYQLQDNHLVFDVASSKLSFSSSLLLHNATCSHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPC4</accession>
    <name>V7BPC4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CHCH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G158200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPC4"/>
    <dbReference type="SMR" id="V7BPC4"/>
    <dbReference type="Gramene" id="ESW19819">
        <property type="protein sequence ID" value="ESW19819"/>
        <property type="gene ID" value="PHAVU_006G158200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8K8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VKTDRNW"/>
    <dbReference type="OrthoDB" id="5586401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48236">
        <property type="entry name" value="COX19-LIKE CHCH FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48236:SF1">
        <property type="entry name" value="COX19-LIKE CHCH FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51808">
        <property type="entry name" value="CHCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="72" mass="8326" checksum="284D3995BBDFB6BD" modified="2014-02-19" version="1" fragment="single">PKRSASSPPPQGIHQSEVDEEDENVNQLDECSSLYRLMQDCVVRSNRNWKVCQPEVHALRECSEKRKNMQGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPJ2</accession>
    <name>V7BPJ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">La-related protein 6A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G164000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Transcriptional regulator.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPJ2"/>
    <dbReference type="SMR" id="V7BPJ2"/>
    <dbReference type="STRING" id="3885.V7BPJ2"/>
    <dbReference type="Gramene" id="ESW19889">
        <property type="protein sequence ID" value="ESW19889"/>
        <property type="gene ID" value="PHAVU_006G164000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1855">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMGKYGQ"/>
    <dbReference type="OrthoDB" id="435402at2759"/>
    <dbReference type="PhylomeDB" id="V7BPJ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08033">
        <property type="entry name" value="LARP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12288">
        <property type="entry name" value="RRM_La_like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000158">
        <property type="entry name" value="La ribonucleoprotein domain family member 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034878">
        <property type="entry name" value="La-rel_plant_RRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045180">
        <property type="entry name" value="La_dom_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006630">
        <property type="entry name" value="La_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002344">
        <property type="entry name" value="Lupus_La"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22792:SF159">
        <property type="entry name" value="LA-RELATED PROTEIN 1B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22792">
        <property type="entry name" value="LUPUS LA PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05383">
        <property type="entry name" value="La"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00302">
        <property type="entry name" value="LUPUSLA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00715">
        <property type="entry name" value="LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50961">
        <property type="entry name" value="HTH_LA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="HTH La-type RNA-binding" evidence="8">
        <location>
            <begin position="85"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="7">
        <location>
            <begin position="183"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="281"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="285"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="304"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="336"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="395" mass="44127" checksum="19E3700E3F126AF9" modified="2014-02-19" version="1">MEGGEQVPPSATAAVTTAVNPTASPHPLVDPFAVPDLTVAETENHALVSDEEHGHELEHDLDHEHDDEHEHDQHLEDRDHAAVPVVSLEDLKPKIIKQVEYYFSDENLPNDKYMLGFVKKNKEGFVPVSVIASFRKMKKLTRDQTFIVAALKESSLLVVSSDGKRVKRLHPLRFNESRDHKLSTVLVENLPDDHSKKNIQRIFHEAGNIKRITINDPCSTSESTKHIKQEMLISNKLHALVEYETIEAAEKAVAMLNNEKDWRNGMQVKLLKRMGKYGHKKQAWKGSNSEKNSSSHVYEQIGDEENHGSSEHHEDTHEEEDGEHLSKDKGGQRYKNQGRTRKLKYRAGAGNGMGHGSSPSTHAAEASKPPPGPRMPDGTRGFAIGRGRPPVPASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR05</accession>
    <name>V7BR05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">60S ribosomal protein L13a-4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G128500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR05"/>
    <dbReference type="SMR" id="V7BR05"/>
    <dbReference type="STRING" id="3885.V7BR05"/>
    <dbReference type="Gramene" id="ESW19480">
        <property type="protein sequence ID" value="ESW19480"/>
        <property type="gene ID" value="PHAVU_006G128500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3204">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMAHDRY"/>
    <dbReference type="OrthoDB" id="1340847at2759"/>
    <dbReference type="PhylomeDB" id="V7BR05"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017148">
        <property type="term" value="P:negative regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00392">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="6.10.250.3250:FF:000001">
        <property type="entry name" value="60S ribosomal protein L13a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1180.10:FF:000003">
        <property type="entry name" value="60S ribosomal protein L13a-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1180.10">
        <property type="entry name" value="Ribosomal protein L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01366">
        <property type="entry name" value="Ribosomal_uL13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005822">
        <property type="entry name" value="Ribosomal_uL13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023563">
        <property type="entry name" value="Ribosomal_uL13_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005755">
        <property type="entry name" value="Ribosomal_uL13_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036899">
        <property type="entry name" value="Ribosomal_uL13_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01077">
        <property type="entry name" value="L13_A_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545:SF18">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L13A-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545">
        <property type="entry name" value="RIBOSOMAL PROTEIN L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00572">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52161">
        <property type="entry name" value="Ribosomal protein L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00783">
        <property type="entry name" value="RIBOSOMAL_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="206" mass="23619" checksum="86296D7FA1E114A9" modified="2014-02-19" version="1">MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGEAALDRLKVYEGIPPPYDKTKRMVVPDALKVLRLQKGHKYCVLGRLSSEVGWSYYDTIRELEKKRKDKAGLVYERKKQLNKLRVKAEKVADEKLGSQLDILAPVKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRU3</accession>
    <name>V7BRU3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="27" type="ORF">PHAVU_005G005900g</name>
    </gene>
    <organism evidence="27 28">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="28" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="28">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="22">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RLP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRU3"/>
    <dbReference type="SMR" id="V7BRU3"/>
    <dbReference type="Gramene" id="ESW20679">
        <property type="protein sequence ID" value="ESW20679"/>
        <property type="gene ID" value="PHAVU_005G005900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ5H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MIYFDIS"/>
    <dbReference type="OrthoDB" id="1055097at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005496">
        <property type="term" value="F:steroid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009742">
        <property type="term" value="P:brassinosteroid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009729">
        <property type="term" value="P:detection of brassinosteroid stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009416">
        <property type="term" value="P:response to light stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000291">
        <property type="entry name" value="Brassinosteroid LRR receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:001678">
        <property type="entry name" value="Calmodulin-binding receptor kinase CaMRLK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000111">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1490.310:FF:000001">
        <property type="entry name" value="Serine/threonine-protein kinase BRI1-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000150">
        <property type="entry name" value="serine/threonine-protein kinase BRI1-like 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045381">
        <property type="entry name" value="BRI1_island_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051716">
        <property type="entry name" value="Plant_RL_S/T_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48053">
        <property type="entry name" value="LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48053:SF31">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE BRI1-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20141">
        <property type="entry name" value="Island"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 23" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="20" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="17" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="18 25" id="KW-0472">Membrane</keyword>
    <keyword evidence="13 23" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-0675">Receptor</keyword>
    <keyword evidence="28" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0754">Steroid-binding</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 25" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="16 25" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="25">
        <location>
            <begin position="845"/>
            <end position="868"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="26">
        <location>
            <begin position="930"/>
            <end position="1207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="24">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="24">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="binding site" evidence="23">
        <location>
            <position position="959"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="EMBL" id="ESW20679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1229" mass="133945" checksum="9B2390C339199516" modified="2014-02-19" version="1">MKPNSKPQKSQMKRAKPYLTRNMSWSPPPQQPPTLFSSLLLLIALFVTVTTPTPAEAEAEPPPTSDALLLMRFKQLHVSSDPRAFLSDWLPHAPSPCAWRGVTCSGESRRVTAVDLADAALSGTLHLPTLTSLPSLHTLVLRGNSFNAFNLSVSTFCALQKLDLSSNNFSGKFPFANLTPCNRLTYLNLSNNLITDGLVSGPGIGLGLSLAQLDLSRNLVSDVSLLVSALNGSALVFLNFSDNRLAGQLSESLVSRSANLSTLDLSYNLLSGAVPPRLVNDAVQVLDFSFNNFSRLDFVSCGSLTRLSFSRNALSRDEFPRGLSGCERLEVLDLSRNEFEAEIPGEILRSLWRLKSLFLERNRFYGEIPSELGSLCGSLVEVDLSENMLSGALPLSFVNCSSLRSLNLARNYLSGNFLVSVVSKLQSLEYLNAAFNNITGPVPLSLVNLKRLRVLDLSSNRLNGNVPSSFCPSGLEKLILAGNYLSGTVPSQVGDCKSLRTVDFSFNSLNGSIPWEVWALPNLADLIMWANNLTGEIPEGICVKGGNLETLILNNNLISGSIPKSIANCTNMIWVSLASNRLTGAIPSGIGNLNALAILQLGNNSLSGRIPPEIGECRRLIWLDLNSNNLTGSIPFELADQAGLVIPGRVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRTERLEGFPMVHSCPLTRIYSGWTVYTFASNGSMIYLDLSYNLLSGTIPGNLGVMAYLQVLNLGHNRLSGNIPDSFGGLKAIGVLDLSHNSLNGSIPGSLESLSFLSDLDVSNNNLTGSIPSGGQLTTFPASRYDNNSGLCGLPLPKCGASRNRSVGVGGWKKKQPAAAGVVIGLLCFLLFALGIVLALYRVRRGQRKEEIREKYIESLPTSGSSSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESMIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVQLLGYCKVGEERLLVYEFMKWGSLEAVLHERAKGGGSNLDWGARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGRRPIDSSEFGDDSNLVGWSKKLYKEKRINEILDPDLIVQTSSESELFQYLRIAFECLDERPYRRPTMIQVMAMFKELQVDTDNDMLDNFSLRDNVIDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSD1</accession>
    <name>V7BSD1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Mind bomb SH3 repeat domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G0250000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSD1"/>
    <dbReference type="STRING" id="3885.V7BSD1"/>
    <dbReference type="Gramene" id="ESW20912">
        <property type="protein sequence ID" value="ESW20912"/>
        <property type="gene ID" value="PHAVU_005G0250000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNANDWK"/>
    <dbReference type="OrthoDB" id="264520at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005769">
        <property type="term" value="C:early endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004842">
        <property type="term" value="F:ubiquitin-protein transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045324">
        <property type="term" value="P:late endosome to vacuole transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044584">
        <property type="entry name" value="KEG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040847">
        <property type="entry name" value="SH3_15"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46960">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE KEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46960:SF1">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE KEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18346">
        <property type="entry name" value="SH3_15"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Mind bomb SH3 repeat" evidence="8">
        <location>
            <begin position="11"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="Mind bomb SH3 repeat" evidence="8">
        <location>
            <begin position="139"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="Mind bomb SH3 repeat" evidence="8">
        <location>
            <begin position="329"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="393" mass="44417" checksum="BC8A390FB3819EB1" modified="2014-02-19" version="1" fragment="single">SPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSIQDSGYLELACCFRKGKWITHFTDVERVPSFKVGQYVRFRIGLVEPRWGWRGAQPESQGVITSIHADGEVRVAFFGLPGLWRGDPSDLEIEQMCEVGEWVRLTDNANDWKSIGPGSVGVVQGIGYEGDELDRSIFVGFCGEQEKWVGPSSHLERFDKLFVGQKVRVKQDVKQPRFGWSGHTHASLGTIQAIDADGKLRIYTPAGSRTWMLDPSEVEVVEEKELCIGEWVRVKASVSTPTHHWGEVSHSSIGVVHRMEDEDLWVAFCFTERLWLCKAWEMERVRAFKVGDKVRIRDGLVNPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGRPWIGDPADLALDEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTI1</accession>
    <name>V7BTI1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_006G201400g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTI1"/>
    <dbReference type="SMR" id="V7BTI1"/>
    <dbReference type="STRING" id="3885.V7BTI1"/>
    <dbReference type="Gramene" id="ESW20350">
        <property type="protein sequence ID" value="ESW20350"/>
        <property type="gene ID" value="PHAVU_006G201400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0446">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KICHNCG"/>
    <dbReference type="OrthoDB" id="5061070at2759"/>
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        <property type="term" value="C:membrane"/>
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        <property type="match status" value="2"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0132">Cell division</keyword>
    <keyword evidence="8 12" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-0505">Motor protein</keyword>
    <keyword evidence="5 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="3" id="KW-0962">Peroxisome biogenesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dynamin-type G" evidence="15">
        <location>
            <begin position="43"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="GED" evidence="14">
        <location>
            <begin position="657"/>
            <end position="748"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="536"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="779"/>
            <end position="828"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="540"/>
            <end position="557"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
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    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022593"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
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            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW20350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="828" mass="91285" checksum="BBF2B15E496AA048" modified="2014-02-19" version="1">MAEEVSSSTTSPAASATAPLGSSVISLVNRLQDIFSRVGSQSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLVQTKRKPDAPDDEYGEFLHLPGRKFHDFSDIRREIQAETDREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKTPTCLILAVTPANSDLANSDALQMAGIADPDGNRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIQMNRSIKDALVAEEKFFRSRPVYSGLADSCGVPQLAKKLNQILAQHIKAVLPGLRARISTSLVSVAKEHASYGEITESKAGQGALLLNILSKYCEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPEVPFEVLVRRQISRLLDPSLQCARFIYDELMKISHRCMVTELQRFPFLRKRMDEVIGNFLREGLEPSENMIAHMVEMEMDYINTSHPNFIGGSKALEIAVQQSKSSRAAISVSRQKDALESDKGSASERSVKSRAILARQANGVVTDPGVRAASDVEKSVPSGNTVGSSWGISSIFGGGDSRMTVKENMASKPQTEPIHSVEHSFSMIHLREPPPILRPSESNSETEVIEITVTKLLLRSYYDIVRKNVEDLIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPDEIALKRKRCRELLRAYQQAFKDLEELPMEAETVERGYSLPETTGLPKIHGLPTSSMYSTSSSGDYYAASPKHSKSKRSSHSGEFQSPMHAIPDSNGSGRPFTSGFYPTLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUB6</accession>
    <name>V7BUB6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G184200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUB6"/>
    <dbReference type="SMR" id="V7BUB6"/>
    <dbReference type="STRING" id="3885.V7BUB6"/>
    <dbReference type="Gramene" id="ESW20141">
        <property type="protein sequence ID" value="ESW20141"/>
        <property type="gene ID" value="PHAVU_006G184200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KDKANDM"/>
    <dbReference type="OrthoDB" id="6363407at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.700">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372">
        <property type="entry name" value="DAUER UP-REGULATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47372:SF24">
        <property type="entry name" value="LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58113">
        <property type="entry name" value="Apolipoprotein A-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="28"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="145"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="186"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="226"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="241" mass="26118" checksum="DB44585809FE7D63" modified="2014-02-19" version="1">MAAMFITRSTLFRFSKSIPHAPSLALKPSTVTFSSSPNSSEWRNAAEGTRDARGNWTYDSAEAKRKADEVSEKAKETASEGLDLAKDQAREAKDRTKEYAQDAKEKTKDAAGSVRDSAESAKEKAKEYAYETKDSAKEAAGTAAEKGKEGAEWTKKKTEEVAASTGETLKNVGEKAKQGVQGAWDAAKDTTQKIKETLVGKDDDDDDNDGYGHGRGGLKVDDDDVAELKRRVGKSYGDKGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVG7</accession>
    <name>V7BVG7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA/rRNA methyltransferase SpoU type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G036700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVG7"/>
    <dbReference type="SMR" id="V7BVG7"/>
    <dbReference type="STRING" id="3885.V7BVG7"/>
    <dbReference type="Gramene" id="ESW21045">
        <property type="protein sequence ID" value="ESW21045"/>
        <property type="gene ID" value="PHAVU_005G036700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ5S">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYEQLQF"/>
    <dbReference type="OrthoDB" id="5580682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042802">
        <property type="term" value="F:identical protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002130">
        <property type="term" value="P:wobble position ribose methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18094">
        <property type="entry name" value="SpoU-like_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1280.10:FF:000002">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01885">
        <property type="entry name" value="tRNA_methyltr_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016914">
        <property type="entry name" value="TrmL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42971">
        <property type="entry name" value="TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42971:SF1">
        <property type="entry name" value="TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="alpha/beta knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="tRNA/rRNA methyltransferase SpoU type" evidence="6">
        <location>
            <begin position="80"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW21045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="262" mass="28914" checksum="C3F7C549EAE2ED33" modified="2014-02-19" version="1">MDFTALKSLNIATPFHFPSSKFSPFSQFTFFHFKPFLTSSSSRFFPHCSPNGSAKIVSKEGALPRGVGEAVNEASCSKVLQVVLVSPQIPGNTGCIARTCAASNVGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHDSWGDFRDYFRQQEGEKRLLAFTKRGTQIHSEFSYRKGDYLLFGSETSGLPPEALVDCKTEPFGGGTVKIPMVETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESHIDTTEESFIAEDIFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVM7</accession>
    <name>V7BVM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Large ribosomal subunit protein uL6 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G038900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVM7"/>
    <dbReference type="SMR" id="V7BVM7"/>
    <dbReference type="STRING" id="3885.V7BVM7"/>
    <dbReference type="Gramene" id="ESW21068">
        <property type="protein sequence ID" value="ESW21068"/>
        <property type="gene ID" value="PHAVU_005G038900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1694">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTTHQKF"/>
    <dbReference type="OrthoDB" id="2436667at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd13156">
        <property type="entry name" value="KOW_RPL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000014">
        <property type="entry name" value="60S ribosomal protein L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000915">
        <property type="entry name" value="60S_ribosomal_eL6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041997">
        <property type="entry name" value="Ribosomal_eL6_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005568">
        <property type="entry name" value="Ribosomal_uL6_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10715">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10715:SF0">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN EL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01159">
        <property type="entry name" value="Ribosomal_L6e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03868">
        <property type="entry name" value="Ribosomal_L6e_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL6 N-terminal" evidence="5">
        <location>
            <begin position="4"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="41"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="232" mass="26044" checksum="5BE23E13873BB7EA" modified="2014-02-19" version="1">MAPKKPRSTSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPDSLAQKPPKFYPADDVRKPLLNKHKPKPAKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDRFDDKYFSKDAKKKRTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDTALLKAIESVPDLKSYLGARFSLKAGMKPHELVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX56</accession>
    <name>V7BX56_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">PRA1 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G160500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="7">Membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the PRA1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX56"/>
    <dbReference type="Gramene" id="ESW22529">
        <property type="protein sequence ID" value="ESW22529"/>
        <property type="gene ID" value="PHAVU_005G160500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3142">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHQIEPA"/>
    <dbReference type="OrthoDB" id="63113at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004895">
        <property type="entry name" value="Prenylated_rab_accept_PRA1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19317:SF2">
        <property type="entry name" value="PRA1 FAMILY PROTEIN F2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19317">
        <property type="entry name" value="PRENYLATED RAB ACCEPTOR 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03208">
        <property type="entry name" value="PRA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="21001" checksum="91532861BC916D77" modified="2014-02-19" version="1">MTNYGAIPTSSSPSTNLEFISRAKQRVKEGLATRRPWKIMLNLHSFALPAGFSDAVRRVKENVGYFQMNYAIVVLVVLFLSLLWYPISLIVFVVLTVAWLFLYFLRDEPLFLFGRMISDRVVLVVMGVLTVALLLLTGAIPNILVALLIGAVLVVAHAALRRTDDLFYDEEEAAARFVPPPPHSGAPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXI8</accession>
    <name>V7BXI8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G097300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXI8"/>
    <dbReference type="Gramene" id="ESW21760">
        <property type="protein sequence ID" value="ESW21760"/>
        <property type="gene ID" value="PHAVU_005G097300g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="91" mass="11192" checksum="180E52CE0162E150" modified="2014-02-19" version="1" fragment="single">ALYTRRENVGGLRWKHFADLNNLSGWIQLFYGFLSRPYWSHSRWCFIYLFMKKIFMYYALFLHDTLLNLYMTLIWISWFVTDMTSLMSRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXJ4</accession>
    <name>V7BXJ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G058400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXJ4"/>
    <dbReference type="SMR" id="V7BXJ4"/>
    <dbReference type="STRING" id="3885.V7BXJ4"/>
    <dbReference type="Gramene" id="ESW21291">
        <property type="protein sequence ID" value="ESW21291"/>
        <property type="gene ID" value="PHAVU_005G058400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWIDVPH"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000005">
        <property type="entry name" value="1-aminocyclopropane-1-carboxylate oxidase homolog 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209:SF836">
        <property type="entry name" value="2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209">
        <property type="entry name" value="OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="7">
        <location>
            <begin position="214"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="41371" checksum="8A9BD43D128BE89C" modified="2014-02-19" version="1">MGFGVSVSEKVNTERVRELKEFDDTKAGVKGLVDQGITKIPRIFHHPPDEHVKVSTSGGEADNIPVIDLAEDDKDPSLRQGVIDRIREASEKWGFFQVVNHGIPVTVLEDLKDGVCRFYEQDTEVKKDLYTRDQMKPFLYNSNFDIYSSPALNWRDTFFCYLAPNPPKPQDLPVVCRDILLEYGTCVMKLGIALFELLSESLGLHPNHLKDMDCAKGLISLCHYYPACPEPELTLGTTKHSDNCFLTVLLQDHIGGLQVLYQNTWIDIAPEPGALVVNIGDLLQLITNDRFRSVEHRVVANVTGPRISVACFFSEGLKSSGKLYGPIKELLSEDNPPKYRETTVEEYVRYFNEKGLDGTSALHHFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYK4</accession>
    <name>V7BYK4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G089000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYK4"/>
    <dbReference type="STRING" id="3885.V7BYK4"/>
    <dbReference type="Gramene" id="ESW21661">
        <property type="protein sequence ID" value="ESW21661"/>
        <property type="gene ID" value="PHAVU_005G089000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRNH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SNFQMDS"/>
    <dbReference type="OrthoDB" id="673975at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11393">
        <property type="entry name" value="bHLH_AtbHLH_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000032">
        <property type="entry name" value="Transcription factor bHLH123 family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045239">
        <property type="entry name" value="bHLH95_bHLH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223:SF46">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH83-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="8">
        <location>
            <begin position="338"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="48"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="168"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="319"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="67"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="168"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="214"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="458" mass="50840" checksum="FE9C1CD8267A17DE" modified="2014-02-19" version="1">MADDQFQASGNWWDTARNVRYESRTSHSSSSAITNIGNFGWQASDMAEMKPRSSMDSSSVVFHDSQNKLQPPDSTTSTDPNLHIMDLGLSSQAMDWNQASLLRGEKGTENSFRSMLQENLSSSRTNFQQETGVELSQQVQWRSEKMFSADSSSNEFKQVNRGFSLDQSKFSPQYSSGDSTVTSQGLPSSNFQMDSSALYGTPSILQGLLGPDHNNQPQQQQPSSFENRSISFPYPTTYGLNSNNDLVPSWSKVPQFLRGSPPKQPPSNQLHFTNNAPFWNASEAANFKDIRASFFPSLQPPFSTPNFEVQSKNISEVRERGTVGKKSGNEPAPKRTRNETPSPMPAFKMRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKTGAPIQIQQNSGKCKETEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYW7</accession>
    <name>V7BYW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G101500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYW7"/>
    <dbReference type="SMR" id="V7BYW7"/>
    <dbReference type="STRING" id="3885.V7BYW7"/>
    <dbReference type="Gramene" id="ESW21816">
        <property type="protein sequence ID" value="ESW21816"/>
        <property type="gene ID" value="PHAVU_005G101500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1595">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCEEQQQ"/>
    <dbReference type="OrthoDB" id="410307at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1370.210:FF:000009">
        <property type="entry name" value="Zinc finger CCCH domain-containing protein 66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045234">
        <property type="entry name" value="Unkempt-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057444">
        <property type="entry name" value="Znf-CCCH_AtC3H23-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493">
        <property type="entry name" value="UNKEMPT FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14493:SF90">
        <property type="entry name" value="ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25512">
        <property type="entry name" value="zf-CCCH_AtC3H23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="391" mass="43679" checksum="47DD9A4279C39CD7" modified="2014-02-19" version="1">MTSVCAQQHKFHPSHQFLSPKKTLREIDIPPRKLLTRRATAACGISDLFSDDTMLQKFLPSNNLDDSDEDDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSGTVCPDYRRGGCNRGDACEYAHGVFECWLHPAKYRTEACKDGKNCKRKVCFFAHTPRQLRILPVTSPSSDDMSCTKSINKLFNHASRSNNNCCLFCHCVSSSSSSTTASPTSTLFNISHYSPPLSPSSSSSPPPSPLKPRNGVSVSPISRYGAANVNPHHGVVSYKEAFAEFVNSLEGLSLNEGSPVSGAKPLNLPWFDVSLNCEEQQQQRQPLSASSFGCEDPQQFIYSPPSTRTPTNVKLCSNRFIGNDNKVVGGESNVPDLAWVNELLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ90</accession>
    <name>V7BZ90_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">POTRA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G148500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast outer membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ90"/>
    <dbReference type="SMR" id="V7BZ90"/>
    <dbReference type="STRING" id="3885.V7BZ90"/>
    <dbReference type="Gramene" id="ESW22375">
        <property type="protein sequence ID" value="ESW22375"/>
        <property type="gene ID" value="PHAVU_005G148500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSQ3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPYEAFC"/>
    <dbReference type="OrthoDB" id="2013615at2759"/>
    <dbReference type="PhylomeDB" id="V7BZ90"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009707">
        <property type="term" value="C:chloroplast outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009658">
        <property type="term" value="P:chloroplast organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.310:FF:000013">
        <property type="entry name" value="Outer envelope protein 80 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.160.50:FF:000006">
        <property type="entry name" value="Outer envelope protein 80, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.310:FF:000014">
        <property type="entry name" value="Outer envelope protein 80, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.310">
        <property type="entry name" value="membrane protein fhac"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.50">
        <property type="entry name" value="membrane protein fhac: a member of the omp85/tpsb transporter family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034746">
        <property type="entry name" value="POTRA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815:SF32">
        <property type="entry name" value="OUTER ENVELOPE PROTEIN 80, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51779">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0934">Plastid</keyword>
    <keyword evidence="1" id="KW-1002">Plastid outer membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="POTRA" evidence="5">
        <location>
            <begin position="258"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW22375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="675" mass="73641" checksum="B4A1B01796ECA918" modified="2014-02-19" version="1">MLRNDDVRVVSSAIKIPLPSKRPTCPMRTAHSHIANATNSIAQLVNSFASHSTEFTRSVLQKSSLLCSATLSLTGDRKRACPIRRMASLSLSEEAQQKARQNEERVLISEVLVRNKDGEEMERKDLEAEAVQALKACRPNSALTVREVQEDVHRIINSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFQGLVCEGANVLPAKFLENSMRDGYGKIINLRRLDEAISSINNWYMERGLFAMVSAVEILSGGILRLQVSEAEVNNISIRFLDRKTGEITMGKTKPETILRQITTKKGQVYSMLEGKRDVETVLTMGIMEDVSIIPQPEDTGKVDLVMNVVERPSGGFSAGGGISSGITNGPLRGLIGSFAYSHRNVFGKNQKLNISLERGQIDSVYRINYTDPWIQGDDRRTSRTIMIQNSRTPGTIVHGNADGNGSLTIGRITGGIEFSRPIRPKWSGTAGLVFQHAGVRDEKGIPIIKDCFSSPLTASGNTHDETLLAKLETVYTGSGDHGSSMFVLNMEKGLPLLPEWLSFTRVNARARKGVEIGPARLHLSISGGHVVGNFPPYEAFAIGGTNSVRGYEEGSVGSGRSYVVGSGEISFPMYGPVEGVIFSDYGTDLGSGPTVPGDPAGARKKPGSGYGYGFGIRVESPLGPLRLEYAFNDKKERRFHFGVGHRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZE5</accession>
    <name>V7BZE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="3 6">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G034500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12 6">
            <text>UDP-alpha-D-glucose + 2 NAD(+) + H2O = UDP-alpha-D-glucuronate + 2 NADH + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="3 6"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZE5"/>
    <dbReference type="SMR" id="V7BZE5"/>
    <dbReference type="STRING" id="3885.V7BZE5"/>
    <dbReference type="Gramene" id="ESW23292">
        <property type="protein sequence ID" value="ESW23292"/>
        <property type="gene ID" value="PHAVU_004G034500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2666">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LFMGFTE"/>
    <dbReference type="OrthoDB" id="5059218at2759"/>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006024">
        <property type="term" value="P:glycosaminoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006065">
        <property type="term" value="P:UDP-glucuronate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.100:FF:000001">
        <property type="entry name" value="UDP-glucose 6-dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000032">
        <property type="entry name" value="UDP-glucose 6-dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000089">
        <property type="entry name" value="UDP-glucose 6-dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.100">
        <property type="entry name" value="Cytochrome c1, transmembrane anchor, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028356">
        <property type="entry name" value="UDPglc_DH_euk"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11374:SF64">
        <property type="entry name" value="UDP-GLUCOSE 6-DEHYDROGENASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11374">
        <property type="entry name" value="UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500133">
        <property type="entry name" value="UDPglc_DH_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="UDP-glucose/GDP-mannose dehydrogenase C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0520">NAD</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDP-glucose/GDP-mannose dehydrogenase C-terminal" evidence="9">
        <location>
            <begin position="328"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="8"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="86"/>
            <end position="90"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="127"/>
            <end position="128"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="272"/>
            <end position="275"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="342"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR500133-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR500133-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW23292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="480" mass="53194" checksum="B78F9092BA6BDA97" modified="2014-02-19" version="1">MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVFEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILSHNSKGTKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGEKAIETLKNVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVTQVSYAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVATKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEEQIQRDLWMNKFDWDHPIHLQPTSPTTEKKVSVVWDAYEATKDADGVCILTEWDEFKSLDYQKVYDNMRKPAFVFDGRNVVDMQKLREIGFIVYSIGKPLDPWLKDMPAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C001</accession>
    <name>V7C001_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G136000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C001"/>
    <dbReference type="Gramene" id="ESW22206">
        <property type="protein sequence ID" value="ESW22206"/>
        <property type="gene ID" value="PHAVU_005G136000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755132" evidence="2">
        <location>
            <begin position="25"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="91" mass="9265" checksum="C690C0A17407D683" modified="2014-02-19" version="1">MENINMKFVVVVVCLAVCIGASWGGSHDGAKANEEKARQAATQTVNAAKDSTTSSDNSAGTPVVDAATHEPATKESETLGQQASEKSTGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C059</accession>
    <name>V7C059_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">4-coumarate--CoA ligase-like 9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G055800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C059"/>
    <dbReference type="SMR" id="V7C059"/>
    <dbReference type="STRING" id="3885.V7C059"/>
    <dbReference type="Gramene" id="ESW23539">
        <property type="protein sequence ID" value="ESW23539"/>
        <property type="gene ID" value="PHAVU_004G055800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1176">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRFGALW"/>
    <dbReference type="OrthoDB" id="10253869at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016405">
        <property type="term" value="F:CoA-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05904">
        <property type="entry name" value="4CL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.30:FF:000007">
        <property type="entry name" value="4-coumarate--CoA ligase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096:SF160">
        <property type="entry name" value="4-COUMARATE--COA LIGASE-LIKE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="251"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="4">
        <location>
            <begin position="55"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding enzyme C-terminal" evidence="5">
        <location>
            <begin position="458"/>
            <end position="533"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="547" mass="60121" checksum="EF17A73795C841AA" modified="2014-02-19" version="1">MEKMEKMATTFPPVRDPRSGFNPFSGTFHSLKPPLILPPPNATISAASYILFLRRNSHFPDSSTAVIDSTSGHRLSYQELIHRAENLAANLATVLKLSKSHTALVLSPNILQVPILCFALLSLGVVISPANPLSTRLELTRLFHLSKPAIVFAVTSIAEKTREFHVRTVLLDSPEFDSLTRTKIQPLSPIPSTTPVTQSDVAAILYSSGTTGKVKGVMLTHRNLTAIAAGYDTVRTKRAEPAVFLYTVPYFHVYGFTFSLGAMVLSETVVIMERFSLRGMLSAAERFRATHITVVPVLVVALTKDRVTDEYELTSLEGIVCGGAPLRKEIHEAFKTKFPKVHIMQGYGLTECAVTRTVPEEANQVGTAGRLKPDIEAKIVNPQTGKLMLPGQKGELWIKGPYVMKGYVDEPEATSATLVNGWLRTGDLCYFDNDGFLYVVDRLKELIKYKGYQVAPAELEELLLSHPDITDAAVIPYPDDEAGEVPMAFVVRQPQSSLGAAEVVDFVAKQVTPYKKIRRVAFVDSIPKNASGKILRKDLCKIALSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1C7</accession>
    <name>V7C1C7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FBD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G018800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1C7"/>
    <dbReference type="Gramene" id="ESW23105">
        <property type="protein sequence ID" value="ESW23105"/>
        <property type="gene ID" value="PHAVU_004G018800g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436850at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006566">
        <property type="entry name" value="FBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050232">
        <property type="entry name" value="FBL13/AtMIF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013101">
        <property type="entry name" value="LRR_PRU1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900:SF34">
        <property type="entry name" value="EMB|CAB62440.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900">
        <property type="entry name" value="F-BOX/RNI SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08387">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07723">
        <property type="entry name" value="LRR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FBD" evidence="1">
        <location>
            <begin position="297"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="353" mass="41696" checksum="A5C2A026C136C466" modified="2014-02-19" version="1">MADIISNLPDSILCVLSKHWNLLSRSVTSMDFDYHGGDHGADRWEDRWGDEKACSRFVSSAYFFLLRRRHKDPSFHRFRLRFKSCYNHGEINTLIKHAMQISRRRLQHLDLNLHLFIEVPFFVFRCKTLVVLKLSHLVLKNIFFVNLPLLKTLHLNSVISIKCQDLLQQFLSRSPNLEDLVVQNFIVKNSVANTNTAEKLYRLFKLVTANVDLHLVPLEIVKNVKVLMTDTVCQQDLVFDLQNLVQFVWTQLLPIHQWLLVLEVLRHCPKLQTLANFIQFLKPMKKNQFCHAYFLFPTCLSSHLKSCCLHNYRGSVFEFKFAEYIMQNAKYLRTMKFCFDISTHPYDNSLRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2M3</accession>
    <name>V7C2M3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cleavage/polyadenylation specificity factor A subunit N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G062800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2M3"/>
    <dbReference type="STRING" id="3885.V7C2M3"/>
    <dbReference type="Gramene" id="ESW23618">
        <property type="protein sequence ID" value="ESW23618"/>
        <property type="gene ID" value="PHAVU_004G062800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVNT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DNAMKVQ"/>
    <dbReference type="OrthoDB" id="1925091at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37383">
        <property type="entry name" value="OS01G0694200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37383:SF1">
        <property type="entry name" value="OS01G0694200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="442" mass="47485" checksum="2D9E54EC49D50D70" modified="2014-02-19" version="1" fragment="single">MVVVQGFKVPLPHPSSLTSSHHPHTSILFEPSSLSLALTHTDSSLSLYPSFSPLSPSPSPPHTQTLNIPSPSSSSTFLLLQQHPSAAPAVIFLVSSPYRSRILLRLYRLRDPSSFERVTRVLCLHKDLCFQPGLGVILDAKHGAAVRLAASVNYFALHALSSNKVWVFAVKDDGGGGNDDGSGSGGVRLMRCAVIECARPVFSLSVAFGFLILGEENGVRVFGLRRLVKGKSGNKRVGNSKQLRNGVGVRGGGLEVANCNGDLEGKMERHGVAAVKQTHVKSKLDDRDGGSCFVVLKGNEVNTNSVTKVSMSIKAISIQAVSQRMFLILDSHGDLHLLSLSNSGVGVDITGNVRPLPRTMKVKSISVLPDLSAMSQTIWISDGYHSVHMFTAMDIENALNEVDGNDCNEKLLRLPVVRVLFSSEKIQDIISLSANSVLILGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4X4</accession>
    <name>V7C4X4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">RNA-dependent RNA polymerase</fullName>
            <ecNumber evidence="8">2.7.7.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G016800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the RdRP family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.48" evidence="8"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4X4"/>
    <dbReference type="SMR" id="V7C4X4"/>
    <dbReference type="STRING" id="3885.V7C4X4"/>
    <dbReference type="Gramene" id="ESW25212">
        <property type="protein sequence ID" value="ESW25212"/>
        <property type="gene ID" value="PHAVU_003G016800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0988">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AMSPACI"/>
    <dbReference type="OrthoDB" id="6513042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031380">
        <property type="term" value="C:nuclear RNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003968">
        <property type="term" value="F:RNA-directed RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030422">
        <property type="term" value="P:siRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057590">
        <property type="entry name" value="PH_RDR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007855">
        <property type="entry name" value="RDRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058752">
        <property type="entry name" value="RDRP_C_head"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057596">
        <property type="entry name" value="RDRP_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058751">
        <property type="entry name" value="RDRP_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058763">
        <property type="entry name" value="RRM_RDR1/2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23079:SF27">
        <property type="entry name" value="RNA-DEPENDENT RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24823">
        <property type="entry name" value="PH_RDR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05183">
        <property type="entry name" value="RdRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26253">
        <property type="entry name" value="RdRP_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26252">
        <property type="entry name" value="RdRP_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26250">
        <property type="entry name" value="RRM_RdRP1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 8" id="KW-0696">RNA-directed RNA polymerase</keyword>
    <keyword evidence="6 8" id="KW-0943">RNA-mediated gene silencing</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="1114"/>
            <end position="1134"/>
        </location>
    </feature>
    <feature type="domain" description="RDR1/2-like RRM" evidence="12">
        <location>
            <begin position="4"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="RDR1/2-like PH-like" evidence="11">
        <location>
            <begin position="102"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP helical" evidence="13">
        <location>
            <begin position="261"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP core" evidence="10">
        <location>
            <begin position="365"/>
            <end position="939"/>
        </location>
    </feature>
    <feature type="domain" description="RDRP C-terminal head" evidence="14">
        <location>
            <begin position="960"/>
            <end position="1108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF05183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF24823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF26250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF26252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF26253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1139" mass="130929" checksum="78684C4AEE2AA12A" modified="2014-02-19" version="1">MWKTIQMHGFPATVSAEEVRKFLEQNTGPQTVHAVEIEQLKEGDPTTHVNVKFTDKKSVETILLLVTQNLSYGDHVLNATEIKHDILPKQRNFSHSLDDIAVHFGCQTSKNKLSVLWEHQSASVKFGFRLRKMFIFFHYLSVDYKLQISSESMSRIELHHSDDLTKKLLLFQLCNAPLIYEKDVSKSKYFKEACDNNHWFRGVDFTPSCSIGQSPTLCIELPKSVEVPKFNQHYRNYTEVDDSVFTLDRHIGFSSNFNFVPIVNPPQGFNLPYKILFKINSLVQCGCLPLLAIDINFFQLVDPGKVKLEYIESALHKLDQLKVCCYEPAQWLEKQYKKYSENGLLPVSSAISLDDGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDEDMEKLHSADLVPSSSSVSMDRETKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDIRNWMGEFHEIRNVAKYAARLGQSFSSSRETVRVERHEVKIIPDIEFRRGENKYCFSDGIGKISYELAQEVAKKCGCRDTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTNLDVLAWSKYKPCYLNRQIITLLSTLGVQDQVFRKKQREVLNQLKMLSRNPLMVLDYMSTGEIAKVLKEMLICGFHPNKEPFVSMMLQTLYASKLQELQLKTRILVKRGRALLGCLDETRTLKYGEVFVQIAHQRNKQFLAMSSLSSNRYASNKSKHIVKGKVIVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNVDHDVTLQEVQEYFAHYIVKDKLGIVASAHTVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEVPQHLRVEEYPDFMEKPDKPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDSDMEIEGFEKYTASACEYKNMYDFKLGNLMDYYGIETEAEIMSGNILKMSKTFRERKDLEGVNHAVMSLRKEARSWFNVMIKNKSNSEVDDGDVAYAIASAWYHVTYHPRYWGSYNEGLKRDHFLSFPWCVHDTLIQIKKEKVRQRTFSMEFWRILKLIPLLLFFFLLWIIVQYLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5A7</accession>
    <name>V7C5A7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G029100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5A7"/>
    <dbReference type="SMR" id="V7C5A7"/>
    <dbReference type="Gramene" id="ESW25357">
        <property type="protein sequence ID" value="ESW25357"/>
        <property type="gene ID" value="PHAVU_003G029100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25358">
        <property type="protein sequence ID" value="ESW25358"/>
        <property type="gene ID" value="PHAVU_003G029100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFRWAEA"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932">
        <property type="entry name" value="ATPASE EXPRESSION PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932:SF63">
        <property type="entry name" value="OS08G0290000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="12"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732336" description="Pentacotripeptide-repeat region of PRORP domain-containing protein" evidence="4">
        <location>
            <begin position="28"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="201"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="236"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="271"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="306"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="341"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="376"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="411"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="446"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="481"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="516"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="551"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="586"/>
            <end position="620"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW25357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="652" mass="74302" checksum="2BB5D1ACE33B0A48" modified="2014-02-19" version="1">MSLHFRASKPFLTLKLRFLLPLPSSFSFCTYDAVVNNNRSVVLFRAAVAEPELLVRVLNTVRDRPVAALRFFRWAERQTGFKRSELAYAVILDILARNGLMRSAYCIMEKEVVRMGGGLVDVLADGGVSSSEVCVKLLDLLLWIYAKKSMVGMCWLVFYKMVGKGLLPDVKNCNRVLRLLKDTNVAREVYNVMVECGMRPTTVTYNTMLDYFCKQGQVQQARQLLLQMQRMGCSANELSYNILVNGLSHEGELEQAEELIEEMLRLGLKVSAYTYDPLIRGYCEKRLLDKASSLGEEMLSRGAVPTVATFNTIMYGLCKWGRVSDARQLLDVMVNKNLMPDLISFNTLIYGYSRFGDLDVARRIKDEMIKHGPNPDVFTYTILVRGFCKTGNLPMAKELFDEMLHRGVQPDRFAYITRIVGELKLGDPSKAFGMQEEMLSKGFPPDLITYNVFIDGLHKLGNLKEASKLMQKMLYNGIVPDHVTYTSIIHAHLMAGDLRKARVVFYEMLSKGIFPSVVTYTVLIHSYAVRGRLEVAILHFIEMLEKGVYPNVITYNALINGLCKVRKMDQAYHFFVEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYELHAVWRLENVIGGCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5H0</accession>
    <name>V7C5H0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Malectin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G145300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5H0"/>
    <dbReference type="SMR" id="V7C5H0"/>
    <dbReference type="STRING" id="3885.V7C5H0"/>
    <dbReference type="Gramene" id="ESW24613">
        <property type="protein sequence ID" value="ESW24613"/>
        <property type="gene ID" value="PHAVU_004G145300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVXJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PYNWDWI"/>
    <dbReference type="OrthoDB" id="2143199at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000129">
        <property type="entry name" value="Leucine-rich repeat receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF44">
        <property type="entry name" value="CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757410" description="Malectin-like domain-containing protein" evidence="8">
        <location>
            <begin position="26"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="domain" description="Malectin-like" evidence="9">
        <location>
            <begin position="30"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW24613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="536" mass="59337" checksum="5783B86D0196A5D4" modified="2014-02-19" version="1">MTVPPISFVLGVALWVLFFSKPCLTVFVSIDCGSSQSSTDENNIRWVGDGDYIQHGESHDVYLGSNPLSTLRAFPNRKKSCYSIRVGKGEKILTRASFYYGNYDKKFSPPVFDLQFDGNYWATVNSSSYYYVDYEAIYITKGNFTSICVAQTKPNQIPFISSLEVRSLDPTMYSHVDPNHALILQWRYAFGGNQTIRYPDDVFDRIWTPSFGIGLSEVKSEASGIDTSTAEDHPPQAALGNAVISSSTTQNMQFINRLPTEELPIYITAYFSEVNESAAGKRSIQMYVDNKPFLSPIVPPFGSVKEVYITNVTASANTSFVLQASATSTLPPVLNALEVYTLSDTLTAGTDSRDVQGLLQLQLAFEVLVEWSGDPCLPNPYNWDWIQCNSEVKPRVIALYLNGYNLRGTLPDFSSMNALEIIHLQNNTIEGPIPDFLGLLPNLKTLNLSNNRFNGSIPTSLKNKNIELVTTNNCLSGMKCQPLSDSPKKLPKSPLQFVSGDEPLGGGSEKIINNLNIAFIVAMQTLLLLVYSAVHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5W7</accession>
    <name>V7C5W7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G148900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5W7"/>
    <dbReference type="STRING" id="3885.V7C5W7"/>
    <dbReference type="Gramene" id="ESW24660">
        <property type="protein sequence ID" value="ESW24660"/>
        <property type="gene ID" value="PHAVU_004G148900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUR9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNINCKL"/>
    <dbReference type="OrthoDB" id="1889094at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098542">
        <property type="term" value="P:defense response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004864">
        <property type="entry name" value="LEA_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044839">
        <property type="entry name" value="NDR1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31415:SF59">
        <property type="entry name" value="HARPIN-INDUCED 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31415">
        <property type="entry name" value="OS05G0367900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03168">
        <property type="entry name" value="LEA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="Late embryogenesis abundant protein LEA-2 subgroup" evidence="6">
        <location>
            <begin position="66"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW24660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23762" checksum="3B1C678964DC2379" modified="2014-02-19" version="1">MCCKNRCISYICCAIITLISVFIVSSIIFWIVISPSNVKFHVSEASLTQFNLTNNNSLYYSLKVNVTVRNPNNNIVVYYRGIKAIAWYKDNDFGWVNLTPFDQGHKNTTVLQVLFEGQSVLKLKPRQLGEYKEETSVGVYNDMAVDFDFRIRAKFGRFKSSRFDPPIVQCRRLSVPLISKAKSSPPFSVTKCRMDRSFFVDRHTEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7M3</accession>
    <name>V7C7M3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G021200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7M3"/>
    <dbReference type="STRING" id="3885.V7C7M3"/>
    <dbReference type="Gramene" id="ESW25265">
        <property type="protein sequence ID" value="ESW25265"/>
        <property type="gene ID" value="PHAVU_003G021200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R15Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHIWCVG"/>
    <dbReference type="OrthoDB" id="770241at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000373">
        <property type="term" value="P:Group II intron splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37763">
        <property type="entry name" value="EXOSOME COMPLEX EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37763:SF1">
        <property type="entry name" value="EXOSOME COMPLEX EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="48505" checksum="E03AD23CD131A007" modified="2014-02-19" version="1">MGCRFLELLYCGNHFIRTNKFAASYLNSIFYHTSKDAASLQWYQNEFPKVKELTHLLANVDAVNGRLIDVRSNSVLFDDDIEREMCTFKTLVRGYVGSSYVQHKMKRVVASFVSNAKHGSFTPFGKATEREPMVVDSLSKVSNFLSVSAQQRKLVRLKVCSQVTQHRIWTGALKEVLNGFAVDLDCLSSRGLNNDALLGGQIVHSCLNFLTEIGVVSDPGSSSWMKLSSSKMVDSFDSRRWEDVLVMFTDLIECCKKETRLKLHVAKAEIMKEGLLHIRDVSVDNTVGYKDAQHQESLVRKKLSKMLGHSSRCVFTLLLYYLYGRVVDIEVDMCGGVNANGKDGKFCLFMGRILTSDSEKMVGRGVKQLDRALGIFKFVWEMAEMKGHLDLQGHMWCVGADSRILRQELIFQGANCNTWVKLNSQWRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8X7</accession>
    <name>V7C8X7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Formin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G059000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the formin-like family. Class-I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8X7"/>
    <dbReference type="SMR" id="V7C8X7"/>
    <dbReference type="STRING" id="3885.V7C8X7"/>
    <dbReference type="Gramene" id="ESW25710">
        <property type="protein sequence ID" value="ESW25710"/>
        <property type="gene ID" value="PHAVU_003G059000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1922">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PANPIMQ"/>
    <dbReference type="OrthoDB" id="1668162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045010">
        <property type="term" value="P:actin nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027643">
        <property type="entry name" value="Formin-like_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213">
        <property type="entry name" value="FORMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213:SF368">
        <property type="entry name" value="HISTONE H3-K79 METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02181">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00498">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757496" description="Formin-like protein" evidence="5">
        <location>
            <begin position="20"/>
            <end position="865"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="119"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="FH2" evidence="6">
        <location>
            <begin position="405"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="18"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="147"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="210"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="62"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="264"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="282"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="313"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="327"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="383"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="865" mass="95895" checksum="1B01D427D24B8418" modified="2014-02-19" version="1">MHTLFNILLFFLAFSSSSSSSSSPSSHPRRVLHQPLFPRISSPPTQPPALSPKPQKQHHLPKFPFSSSSSSSPPPPQKSFFPSYHSPPLPPSPTVVATFPANISSLLLPHPYSHHHRSAAALAVSLSLFSLALLAAAAFVLLHRRRAHRTSSSDTTHDDDDDKASRSDSLRLFPPNAAASDGADRKPRGKSSPTSELLYLGTVANSVNSTLDSSSSHHHDGFRPPYQKLGDSPELKPLPPLPRHKFKQWMNEDDDDKNVKENVEQQEEVEEEEDEEQFFSPRGSSDGNKQHSPPSPSAVAASSSRVFHEDSKFGSTSFTSRTPSYHRSNSLSFSRSPSLNFSPASVKSLPPNNPVSPPFSSSSSSPREEWRVPSRDTNSPARNLPPPPPPPPPRRIWEAPVSVRKESEETLKPKLKALHWDKVKASSDRVMVWDQLRPSSFQLNEDMIETLFVVNNSKEGFGVAIRDNGRRNIVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDTLGTELLESLLKMTPTKDEESKLKGFQDESPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRNSRLFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTSLLHFVVQEIVRTEGSHISGSNHHHASDNVHQYTLQDEVDFKKLGLQIVSGLSGELTNVKKAAAMDSDVLSSDVAKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLERGVQEISTIQAQEKNGLSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRHSVMPANPIMQTFFPEIIGKQLSDSSESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7C955</accession>
    <name>V7C955_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G066700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C955"/>
    <dbReference type="STRING" id="3885.V7C955"/>
    <dbReference type="Gramene" id="ESW25805">
        <property type="protein sequence ID" value="ESW25805"/>
        <property type="gene ID" value="PHAVU_003G066700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SD43">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THFIIYS"/>
    <dbReference type="OrthoDB" id="747111at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33983">
        <property type="entry name" value="OS07G0185900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33983:SF1">
        <property type="entry name" value="OS07G0185900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="7506" checksum="773EA08C06882A37" modified="2014-02-19" version="1">MGKLVEIIDQGVRIAARFHSNCPQTGRKYYHPPSLSDNHAHHSHAAANVAGGVKEDAIARNFDIILCSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9C4</accession>
    <name>V7C9C4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Xyloglucan endotransglucosylase/hydrolase</fullName>
            <ecNumber evidence="11">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G147600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Secreted</location>
            <location evidence="11">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="11">Secreted</location>
            <location evidence="11">Extracellular space</location>
            <location evidence="11">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="11">Contains at least one intrachain disulfide bond essential for its enzymatic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="11"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9C4"/>
    <dbReference type="SMR" id="V7C9C4"/>
    <dbReference type="STRING" id="3885.V7C9C4"/>
    <dbReference type="Gramene" id="ESW26777">
        <property type="protein sequence ID" value="ESW26777"/>
        <property type="gene ID" value="PHAVU_003G147600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ71">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LPLECTH"/>
    <dbReference type="OrthoDB" id="4781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042546">
        <property type="term" value="P:cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008263">
        <property type="entry name" value="GH16_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016455">
        <property type="entry name" value="XTH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005604">
        <property type="entry name" value="XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01034">
        <property type="entry name" value="GH16_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0052">Apoplast</keyword>
    <keyword evidence="1 11" id="KW-0134">Cell wall</keyword>
    <keyword evidence="11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 11" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GH16" evidence="12">
        <location>
            <begin position="1"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="glycosylation site" description="N-linked (GlcNAc...) asparagine" evidence="10">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW26777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="247" mass="27890" checksum="B30AF2914C2A4E54" modified="2014-02-19" version="1">MIVLKFSTTPIFSLCPLTKPLALASSPTTNTCLARLTCSSSSFLETLQMSSKGTTWDEIDFEFLGNLSGDPYIVHTNVYTQGKGSREQQFYLWFDPTADFHTYSILWNPQRIVFSVDGTPIREYKNLESIGVPFPKSQPMRIYSSLWNADDWATRGGLIKTDWSKAPFTASYRNFNANACVWNAGKSSCNSNSPSSATPPTNAWLSQELDSTAQKRMNWVQKNYMIYNYCTDSKRFPQGLPLECTHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9K4</accession>
    <name>V7C9K4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">adenylyl-sulfate reductase (glutathione)</fullName>
            <ecNumber evidence="18">1.8.4.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_003G079800g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) &gt;&gt; 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>glutathione disulfide + sulfite + AMP + 2 H(+) = adenosine 5'-phosphosulfate + 2 glutathione</text>
            <dbReference type="Rhea" id="RHEA:14141"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17359"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="ChEBI" id="CHEBI:58297"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="1.8.4.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="17">Belongs to the APS reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.9" evidence="18"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9K4"/>
    <dbReference type="SMR" id="V7C9K4"/>
    <dbReference type="STRING" id="3885.V7C9K4"/>
    <dbReference type="Gramene" id="ESW25955">
        <property type="protein sequence ID" value="ESW25955"/>
        <property type="gene ID" value="PHAVU_003G079800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0189">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0191">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMINGRT"/>
    <dbReference type="OrthoDB" id="7869097at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033741">
        <property type="term" value="F:adenylyl-sulfate reductase (glutathione) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009973">
        <property type="term" value="F:adenylyl-sulfate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004604">
        <property type="term" value="F:phosphoadenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019344">
        <property type="term" value="P:cysteine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019379">
        <property type="term" value="P:sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd23945">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02993">
        <property type="entry name" value="PDI_a_APS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000153">
        <property type="entry name" value="Phosphoadenosine phosphosulfate reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000252">
        <property type="entry name" value="Phosphoadenosine-phosphosulphate reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00063">
        <property type="entry name" value="CysH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004511">
        <property type="entry name" value="PAPS/APS_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002500">
        <property type="entry name" value="PAPS_reduct_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004508">
        <property type="entry name" value="Thioredoxin-indep_APS_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00424">
        <property type="entry name" value="APS_reduc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002537">
        <property type="entry name" value="PRK02090.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46482:SF9">
        <property type="entry name" value="5'-ADENYLYLSULFATE REDUCTASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46482">
        <property type="entry name" value="5'-ADENYLYLSULFATE REDUCTASE 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01507">
        <property type="entry name" value="PAPS_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="13" id="KW-0198">Cysteine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0934">Plastid</keyword>
    <keyword evidence="14" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0346">Stress response</keyword>
    <keyword evidence="7" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Thioredoxin" evidence="20">
        <location>
            <begin position="330"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="19">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="19">
        <location>
            <begin position="23"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00050468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00055819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00061610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00067033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW25955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="460" mass="51019" checksum="30D54905BC296EEB" modified="2014-02-19" version="1">MALAFTSSISTPSFTFPSSHPTNIPSTGSITISERPNGPTVNLRRSFLKPVNAQPDSLVPLAAATTFFASETKDQDLHPIATHLDNASPLQIMDRALATFGSDIAIAFSGAEDVALIEYAKLTGRAFRVFSLDTGRLNPETYQLFDAVEKHYGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGMDGGIGSLVKWNPVANVKGNDIWNFLRAMNVPVNSLHSQGYVSIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNLKQQEEGAAHLEGNGNGVSQSHANGAATVPDIFNSQNVVNLSRTGIENLAKLEDRKEPWVVVLYAPWCPYCQAMEESYVELAQKLEGSGVKVGKFRADGEQKEFARRELELGSFPTILFFPKHSSRPIKYPSENRDVDSLMAFLNALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAN9</accession>
    <name>V7CAN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Galectin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_003G119000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glycosyltransferase 31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAN9"/>
    <dbReference type="SMR" id="V7CAN9"/>
    <dbReference type="STRING" id="3885.V7CAN9"/>
    <dbReference type="Gramene" id="ESW26423">
        <property type="protein sequence ID" value="ESW26423"/>
        <property type="gene ID" value="PHAVU_003G119000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2287">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LEIPCGL"/>
    <dbReference type="OrthoDB" id="2139606at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008378">
        <property type="term" value="F:galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00070">
        <property type="entry name" value="GLECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000015">
        <property type="entry name" value="Beta-1,3-galactosyltransferase GALT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001079">
        <property type="entry name" value="Galectin_CRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002659">
        <property type="entry name" value="Glyco_trans_31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214:SF3">
        <property type="entry name" value="BETA-1,3-GALACTOSYLTRANSFERASE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00337">
        <property type="entry name" value="Gal-bind_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01762">
        <property type="entry name" value="Galactosyl_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00908">
        <property type="entry name" value="Gal-bind_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51304">
        <property type="entry name" value="GALECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Galectin" evidence="15">
        <location>
            <begin position="172"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="44"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="51"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW26423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="639" mass="71649" checksum="3DAAFC0F4C47517B" modified="2014-02-19" version="1">MRKWYGGLLIIALGMMLFFLYNLKGIQPQKQSAKQSAYNFFNNHTPDDSIKQSSNLSVNSSEMELKRVPKPTRRPHLVHVAGLNDLYGMKNLSKGDMDSVLIWDSLRTLLSRSDALDETAQGIKEASVAWKELLSTIEKDKASKVNRMDGPENQNCPFSVTSPGKAELDSGITLDLPCGLVVDSSITLIGIPNGQNRSFQIGLAGQELEGEPNPPVILHYNVSLPGENMTEEPYIVQNTWTSDLGWGKEERCPAHGSANIQEVDGLVLCNVQAVRSNTKGNGNFGQPASVPSNISSESAHRNAIFPFSEGNAFTSTLWVGSEGFHMTVNGRHETSFAYRENLEPWLVSSIKVAGSLSLLSILAKGLPVTEDNDIVVDVENLKAPSIPKKRLILLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSLKEKPSKGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPLWAHGPGYVISRDIAKFIVNGHQERKLKLFKLEDVAMGIWIEQFANGGKEVRYMNDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKERQPLCCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBV9</accession>
    <name>V7CBV9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MULE transposase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G116000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBV9"/>
    <dbReference type="STRING" id="3885.V7CBV9"/>
    <dbReference type="Gramene" id="ESW26391">
        <property type="protein sequence ID" value="ESW26391"/>
        <property type="gene ID" value="PHAVU_003G116000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AICTINC"/>
    <dbReference type="OrthoDB" id="1918246at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973:SF187">
        <property type="entry name" value="MUTATOR TRANSPOSASE MUDRA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973">
        <property type="entry name" value="POLYPROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MULE transposase" evidence="1">
        <location>
            <begin position="179"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="404" mass="46817" checksum="1F2E254707D5C2E8" modified="2014-02-19" version="1" fragment="single">WSYFEIVGILKDMGFLTVQEMWYSRGGCEELKNRLWVLTLNKLLEVKKLNDVHTCARQFKVDLLSTKWLSGRLKTSLSQNPKLRSNDVRNKAVKKWNTSISKSKAQRAMAMALKTVQVSFQEQYKQIYDYAHEVMRANPGSTVKVKMKVEDMNGLKVFSIFYVCLKNCKDSFISCRPIIALDGCFLKDFYGGELLTAVGRDPNDQMLPLAYVVVEVECKDSWTWFLQFLIEDVGGLLPAIQELVPGVVQRFCVRHLYANFRKNFPGKKLKTLMWRAANNTYPQAWEREMRAIKKVNDAVFKHLIALPPRFWSRSRLTFTPNCDSLVNNISEGFNSVLVPAHAKPIITMLEDIKTYIMKRWAKNRLKIASFEGSICPKILSKLQKEANQTLYWIPRFDDDIHILF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD55</accession>
    <name>V7CD55_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G151100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD55"/>
    <dbReference type="STRING" id="3885.V7CD55"/>
    <dbReference type="Gramene" id="ESW26821">
        <property type="protein sequence ID" value="ESW26821"/>
        <property type="gene ID" value="PHAVU_003G151100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVM2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TGMKPEG"/>
    <dbReference type="OrthoDB" id="41532at2759"/>
    <dbReference type="PhylomeDB" id="V7CD55"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.630.30:FF:000231">
        <property type="entry name" value="uncharacterized protein LOC106768637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47876:SF2">
        <property type="entry name" value="GCN5-RELATED N-ACETYLTRANSFERASE 7, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47876">
        <property type="entry name" value="OS08G0260000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="89"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="29468" checksum="CE00AD2988B660BC" modified="2014-02-19" version="1">MTLLSSLCSCPPIPCSWFPLTSNTNAFSKNLRTQIQSSASTNIFTQKFDTTLLSIDESFYEDELWAAARLRVRSFHQFRPDAFGIQDHMRYLAEREFEALKERVSGKRMGFRRVSCINASLPLSHIASLSDDLSSSCKFSANGEDRIVVATLDLNQCLNLPDEIVGLKPEVTGADITRAYLSNVCVAEELHRNGLGYALLEVSKLVAYDWGITDLYVHVAVDNEPAKKLYIKSGFVYESEEPAWQARFLDRPRRLLLWSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDF6</accession>
    <name>V7CDF6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G199400g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDF6"/>
    <dbReference type="SMR" id="V7CDF6"/>
    <dbReference type="STRING" id="3885.V7CDF6"/>
    <dbReference type="Gramene" id="ESW27408">
        <property type="protein sequence ID" value="ESW27408"/>
        <property type="gene ID" value="PHAVU_003G199400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEIITRM"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7CDF6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004713">
        <property type="term" value="F:protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071244">
        <property type="term" value="P:cellular response to carbon dioxide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902456">
        <property type="term" value="P:regulation of stomatal opening"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009637">
        <property type="term" value="P:response to blue light"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010114">
        <property type="term" value="P:response to red light"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001659">
        <property type="term" value="P:temperature homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd13999">
        <property type="entry name" value="STKc_MAP3K-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000034">
        <property type="entry name" value="Kinase suppressor of Ras 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000310">
        <property type="entry name" value="Serine/threonine-protein kinase HT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051681">
        <property type="entry name" value="Ser/Thr_Kinases-Pseudokinases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329:SF280">
        <property type="entry name" value="PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00109">
        <property type="entry name" value="TYRKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="10" id="KW-0829">Tyrosine-protein kinase</keyword>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="83"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="34"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW27408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="43379" checksum="508A13160678FC15" modified="2014-02-19" version="1">MKESSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRSDEDEDADQVHVHTSATASPKFRPASTRLSLKKQKQEWEIDPSKLIIKSVIARGTFGTVHRGIYDTQDVAVKLLDWGEEGQRTEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATMGSSELQIQTDNGLIGMPSNVCCVVVEYLAGGNLKSFLIKNRRRKLAFKIVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEMPRCCPSSLANVMKKCWDATPDKRPEMDEVVSMLEAIDTTKGGGMIPHDQQQGCFCFRKHRGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDZ4</accession>
    <name>V7CDZ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Domain X domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G215300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDZ4"/>
    <dbReference type="STRING" id="3885.V7CDZ4"/>
    <dbReference type="Gramene" id="ESW27588">
        <property type="protein sequence ID" value="ESW27588"/>
        <property type="gene ID" value="PHAVU_003G215300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW27589">
        <property type="protein sequence ID" value="ESW27589"/>
        <property type="gene ID" value="PHAVU_003G215300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW27590">
        <property type="protein sequence ID" value="ESW27590"/>
        <property type="gene ID" value="PHAVU_003G215300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RICMRHE"/>
    <dbReference type="OrthoDB" id="1866033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003964">
        <property type="term" value="F:RNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006315">
        <property type="term" value="P:homing of group II introns"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090615">
        <property type="term" value="P:mitochondrial mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01651">
        <property type="entry name" value="RT_G2_intron"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024937">
        <property type="entry name" value="Domain_X"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33642">
        <property type="entry name" value="COX1/OXI3 INTRON 1 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33642:SF3">
        <property type="entry name" value="NUCLEAR INTRON MATURASE 4, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01348">
        <property type="entry name" value="Intron_maturas2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="DNA/RNA polymerases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Domain X" evidence="2">
        <location>
            <begin position="574"/>
            <end position="668"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="798" mass="90167" checksum="25737ACAA261A54A" modified="2014-02-19" version="1">MRVVTAANSLKSLHSLHFLRVTSSLPLPFKDKQHFETPPHSATNSPDNDHVGQSTLAMDLASLLEESKPKPKPKPKSRMELKRFLELRIKKRVKEQHANGKFQDLLKTVISNAETLRDAYNCIRINSNTLDAASISSHDPSFLDDLAEELGKGDFDVCANTTSFSTRRGTVNKEILVLPNLRLKVVLEAMRIALEVVYKPHFSKISHGCRSGRGCTAALKYVCKGVLSPDWWFTVLVVKKLDAAVLEKLISVMEEKIEDPSLYGFIRSMFDAGVLNLEFGGFPKGHGLPQEGVLSPILMNIYLDLFDSEFCRLSMKYEGIGGGGLNERDRSGSVLRDWFRRQLDGDDVRKSSGVKVYSCRYMDEMFFAVSGSRDAAANFMSEVQSYLRSSLLLDVGDQADVLPCDGSHSIRFLGILVRRTIRESPAVKAVHKLKEKVELFTLQKVEAWNYGTVRIGKKWLGHGLKKVKESEIKHLADSSSLLNRVSCFRKSGMETDHWYKHLLKIWMQDVQAKNVNSEESILSKCVAEPALPQELKDSFYEFTKQAEQYISAEADSILKLLPNNNSSTEQPMAKTETIAPINAIKMRLLRYGLTTTKGFPRSANLLIMLDTNEIIDWFSAISCRWLKWYENCANLEEIKLLITYHVRKSCIRTLAAKYRVHETEIEKLFSEELVRIPSTQETEKEVTKEALDVEAFDNDEALMYGIASSGVCLLSLARIVTQARPCNCFVIGCSSSAPRVYTLHVMERQKSPSWKTGFSPCIHPSLNKRRLGLCKQHLRDLHLGHISLQSIDFSAWKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEP2</accession>
    <name>V7CEP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transcriptional coactivator Hfi1/Transcriptional adapter 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G236400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEP2"/>
    <dbReference type="STRING" id="3885.V7CEP2"/>
    <dbReference type="Gramene" id="ESW27838">
        <property type="protein sequence ID" value="ESW27838"/>
        <property type="gene ID" value="PHAVU_003G236400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRE7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NVCLHNH"/>
    <dbReference type="OrthoDB" id="10264870at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000124">
        <property type="term" value="C:SAGA complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024738">
        <property type="entry name" value="Hfi1/Tada1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21277">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21277:SF29">
        <property type="entry name" value="TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12767">
        <property type="entry name" value="SAGA-Tad1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="343" mass="38602" checksum="C7DCE1EE2FEAC373" modified="2014-02-19" version="1">MPAVRCFFPEDTVEQKLHIERKLGSVRARKYFDLLQRFLSLKISKSEFDRTCIATIGRENVPLHNHLLKSILRKACLSKASGPRESKVESSLNVKTPNGCSNLQFLCKDFPQSPRKGRTPNLRDRRYRDRPSPLGPHGKKNIGCDDSAPKIHEQQSFVDLQSPGSRLALPVEDEEVDQDSEIPNVYKRGPIEAPLAIPTYKRRRQKYLYQGLSLGTLSDTCQSIGQLPDTSSLTKRLEQKLETEGCKISMDAASLLNNALDLYLKRLIKPCLDFAASKSVNKFSASIQPGLKELPMRRGMQKPVGSASVSISDFRTAIELNPTILGKDWPLNLEKVCLRELEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH15</accession>
    <name>V7CH15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">60S acidic ribosomal protein P0</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G074600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Ribosomal protein P0 is the functional equivalent of E.coli protein L10.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">P0 forms a pentameric complex by interaction with dimers of P1 and P2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH15"/>
    <dbReference type="SMR" id="V7CH15"/>
    <dbReference type="STRING" id="3885.V7CH15"/>
    <dbReference type="Gramene" id="ESW29492">
        <property type="protein sequence ID" value="ESW29492"/>
        <property type="gene ID" value="PHAVU_002G074600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0815">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DDAMFGL"/>
    <dbReference type="OrthoDB" id="10259902at2759"/>
    <dbReference type="PhylomeDB" id="V7CH15"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05795">
        <property type="entry name" value="Ribosomal_P0_L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.105.20:FF:000001">
        <property type="entry name" value="60S acidic ribosomal protein P0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.105.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050323">
        <property type="entry name" value="Ribosomal_protein_uL10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_uL10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040637">
        <property type="entry name" value="Ribosomal_uL10-like_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043164">
        <property type="entry name" value="Ribosomal_uL10-like_insert_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_uL10-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030670">
        <property type="entry name" value="uL10_eukaryotes"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45699">
        <property type="entry name" value="60S ACIDIC RIBOSOMAL PROTEIN P0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45699:SF3">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00428">
        <property type="entry name" value="Ribosomal_60s"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17777">
        <property type="entry name" value="RL10P_insert"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039087">
        <property type="entry name" value="L10E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160369">
        <property type="entry name" value="Ribosomal protein L10-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL10-like insertion" evidence="8">
        <location>
            <begin position="114"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="293"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR039087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="321" mass="34337" checksum="6AF14C34F443A546" modified="2014-02-19" version="1">MAPKQTKAEKKISYDGKLCQLLDDYGQILVVNADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNNVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFVSGVSIVTSLSLAISFPTLAAAPHMFVNAYKNVLSVAVETDYSYPEADKVKEYLKDPSKFAVAATVAPAAASGAPAAAAAKEEEKKEEPAEESDDDMGFSLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHB6</accession>
    <name>V7CHB6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">procollagen-proline 4-dioxygenase</fullName>
            <ecNumber evidence="4">1.14.11.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G013200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>L-prolyl-[collagen] + 2-oxoglutarate + O2 = trans-4-hydroxy-L-prolyl-[collagen] + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:18945"/>
            <dbReference type="Rhea" id="RHEA-COMP:11676"/>
            <dbReference type="Rhea" id="RHEA-COMP:11680"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:50342"/>
            <dbReference type="ChEBI" id="CHEBI:61965"/>
            <dbReference type="EC" id="1.14.11.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the P4HA family.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.2" evidence="4"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHB6"/>
    <dbReference type="SMR" id="V7CHB6"/>
    <dbReference type="STRING" id="3885.V7CHB6"/>
    <dbReference type="Gramene" id="ESW28733">
        <property type="protein sequence ID" value="ESW28733"/>
        <property type="gene ID" value="PHAVU_002G013200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1591">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRAIYFP"/>
    <dbReference type="OrthoDB" id="420380at2759"/>
    <dbReference type="PhylomeDB" id="V7CHB6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004656">
        <property type="term" value="F:procollagen-proline 4-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.620:FF:000002">
        <property type="entry name" value="Prolyl 4-hydroxylase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.620">
        <property type="entry name" value="q2cbj1_9rhob like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045054">
        <property type="entry name" value="P4HA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006620">
        <property type="entry name" value="Pro_4_hyd_alph"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044862">
        <property type="entry name" value="Pro_4_hyd_alph_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10869">
        <property type="entry name" value="PROLYL 4-HYDROXYLASE ALPHA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10869:SF245">
        <property type="entry name" value="PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13640">
        <property type="entry name" value="2OG-FeII_Oxy_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00702">
        <property type="entry name" value="P4Hc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12" id="KW-0408">Iron</keyword>
    <keyword evidence="13 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="5 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="17">
        <location>
            <begin position="174"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00049169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="34259" checksum="65F5BFFC3D74BB4B" modified="2014-02-19" version="1">MKTKTVKGNWRWNWRTNKLDLPFVFLIGIFFFLAGLLASSLFPHSQEREHDLKLMPRARLTEKSTEEETEYHLSQAGESGDDSITLIPFQVLSWYPRALYFPNFASPQQCESIIKLARVGLKPSTLALRKGETEENTKGIRTSYGVFLSASEDETGTLYAVEEKIAKATKLPRTHGEAFNVLRYEVGQKYSSHYDAFDYAEYGPQKSRRVASFLLYLTDVSEGGETMFPFENGFNMDGRYDFEDCIGLKVRPRRGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWLRDQIQDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI64</accession>
    <name>V7CI64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G033600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CI64"/>
    <dbReference type="STRING" id="3885.V7CI64"/>
    <dbReference type="Gramene" id="ESW28975">
        <property type="protein sequence ID" value="ESW28975"/>
        <property type="gene ID" value="PHAVU_002G033600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3146">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEATLNW"/>
    <dbReference type="OrthoDB" id="302705at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047874">
        <property type="term" value="F:dolichyldiphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006487">
        <property type="term" value="P:protein N-linked glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.144.10:FF:000026">
        <property type="entry name" value="Lipid phosphate phosphatase epsilon 2 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.144.10">
        <property type="entry name" value="Phosphatidic acid phosphatase type 2/haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="PAP2/HPO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="PAP2/HPO_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11247:SF40">
        <property type="entry name" value="LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11247">
        <property type="entry name" value="PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="Acid phosphatase/Vanadium-dependent haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="135"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="177"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="228"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphatidic acid phosphatase type 2/haloperoxidase" evidence="3">
        <location>
            <begin position="136"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="287" mass="32168" checksum="EE6B2B367BCD5A23" modified="2014-02-19" version="1">MAAASSICQTPFTLFQGSNGVERRNLKNASVPDCCFPPSRSLLCSGFHSRRPVLRRNSFWVSKSMGESMRTSAFRDGEGDENIQVFEQEAFIDGTSPFQSKLLSHEVEYKLNRLSKWIVSALYGGFILWRHDAEALWFTAGSILNALLSVLLKHILNQERPSTLKSDPGMPSSHAQSIFFAVFFVILSGVEWLGLNVFTIALSGLVLTSGSFFSYLRVSQQLHTVNQVVVGAVIGSIFSILWYWLWNGFILDVFASYLWVRIVVVLGSVGLCIGFVLFAIRYWLQDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIG8</accession>
    <name>V7CIG8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G110000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIG8"/>
    <dbReference type="SMR" id="V7CIG8"/>
    <dbReference type="STRING" id="3885.V7CIG8"/>
    <dbReference type="Gramene" id="ESW29924">
        <property type="protein sequence ID" value="ESW29924"/>
        <property type="gene ID" value="PHAVU_002G110000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2309">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRYAKSC"/>
    <dbReference type="OrthoDB" id="585154at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000020">
        <property type="entry name" value="60S ribosomal protein L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.950.10:FF:000002">
        <property type="entry name" value="60S ribosomal protein L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.30:FF:000006">
        <property type="entry name" value="60S ribosomal protein L8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.950.10">
        <property type="entry name" value="Ribosomal protein L2, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01320_A">
        <property type="entry name" value="Ribosomal_uL2_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_uL2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_uL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023672">
        <property type="entry name" value="Ribosomal_uL2_arc_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022669">
        <property type="entry name" value="Ribosomal_uL2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022671">
        <property type="entry name" value="Ribosomal_uL2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014726">
        <property type="entry name" value="Ribosomal_uL2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Ribosomal_uL2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF007180">
        <property type="entry name" value="PRK09612.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691:SF16">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="RIBOSOMAL PROTEIN L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03947">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002158">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01382">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00467">
        <property type="entry name" value="RIBOSOMAL_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL2 RNA-binding" evidence="6">
        <location>
            <begin position="11"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein uL2 C-terminal" evidence="5">
        <location>
            <begin position="96"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="210"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="28251" checksum="879632A54D23924A" modified="2014-02-19" version="1">MGRVIRAQRKGGGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKKQTELFVSAEGLYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSACRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK48</accession>
    <name>V7CK48_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G093100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK48"/>
    <dbReference type="STRING" id="3885.V7CK48"/>
    <dbReference type="Gramene" id="ESW29718">
        <property type="protein sequence ID" value="ESW29718"/>
        <property type="gene ID" value="PHAVU_002G093100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7RH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPVIINA"/>
    <dbReference type="OrthoDB" id="1728036at2759"/>
    <dbReference type="PhylomeDB" id="V7CK48"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35094">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35094:SF1">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757849" evidence="2">
        <location>
            <begin position="27"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="14086" checksum="9D83A596031CC86E" modified="2014-02-19" version="1">MLIKGHQIEVPMLVLILIFFVSSVNAVESRKLDETPVPATNGTEEKCGSCGTVYPSPPPPAIPPPSPPPPKKTPTQYCPPPPPSSFIYITGPPGNLYPVDEDFSGAACHRRSFPAVLLPLFVGMLCTLAFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLT3</accession>
    <name>V7CLT3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_002G105200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLT3"/>
    <dbReference type="SMR" id="V7CLT3"/>
    <dbReference type="Gramene" id="ESW29866">
        <property type="protein sequence ID" value="ESW29866"/>
        <property type="gene ID" value="PHAVU_002G105200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHRYSAI"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000012">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000014">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF783">
        <property type="entry name" value="EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00792">
        <property type="entry name" value="PEPSIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 13" id="KW-0645">Protease</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 14" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757893" description="Peptidase A1 domain-containing protein" evidence="14">
        <location>
            <begin position="31"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="15">
        <location>
            <begin position="105"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW29866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="510" mass="55647" checksum="5F772C0EAA9D1DFD" modified="2014-02-19" version="1">MAPSFNSNHNHRHTFLSVSLVMVLFTSSHALHSFGFDIHHRFSDPVKEVFGVADLPDKGTCEYYVAMAHRDRMFRGRRLADGHHTPLTFVPSNETYQIGTFGFLHFANVSVGTPPLSFLVALDTGSDLFWLPCNCTKCVHAIEISNQRIDFSIYDLKGSSTSEKVLCNSSLCELQRQCSSSGGVCPYEVNYLSNGTSTSGFLVDDVLHLITDDHQTKDADTRVTFGCGQVQTGAFLDGAAPNGLLGLGMGDVSVPSILAKEGLTSNSFSMCFGLDGLGRITFGDNSSLVQGKTPFNLRASHPTYNITVSQINLGGNVADLEFHAIFDSGTSFTYLNDPAYTQITNSFNSVVKLQRHSSSSSSDELPFEYCYDLSSNQVVEIPFNLTMKGGDTYTVTDPIVTVSGEDISLLCLGVLKSNNVNIIGQNFMAGYHIVFDRDNMILGWKESNCYDDEFSTLPVNRSHSSAIPPAIAVNPEATSNQPNELSPNLSFKIKPTSALIMALFLLLTIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLZ1</accession>
    <name>V7CLZ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Guanosine nucleotide diphosphate dissociation inhibitor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G212600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the Rab GDI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLZ1"/>
    <dbReference type="SMR" id="V7CLZ1"/>
    <dbReference type="STRING" id="3885.V7CLZ1"/>
    <dbReference type="Gramene" id="ESW31139">
        <property type="protein sequence ID" value="ESW31139"/>
        <property type="gene ID" value="PHAVU_002G212600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1439">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PAMDFVM"/>
    <dbReference type="OrthoDB" id="9446342at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005093">
        <property type="term" value="F:Rab GDP-dissociation inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007264">
        <property type="term" value="P:small GTPase-mediated signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.405.10:FF:000002">
        <property type="entry name" value="Guanosine nucleotide diphosphate dissociation inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.405.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.519.10">
        <property type="entry name" value="Guanine Nucleotide Dissociation Inhibitor, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018203">
        <property type="entry name" value="GDP_dissociation_inhibitor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000806">
        <property type="entry name" value="RabGDI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787:SF10">
        <property type="entry name" value="GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11787">
        <property type="entry name" value="RAB GDP-DISSOCIATION INHIBITOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00996">
        <property type="entry name" value="GDI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00892">
        <property type="entry name" value="RABGDI"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00891">
        <property type="entry name" value="RABGDIREP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00053142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW31139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="445" mass="49629" checksum="7C8CE4BBC9FC1A97" modified="2014-02-19" version="1">MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGASTSLNLTQLWKRFREDDKPAEALGSSREYNVDMIPKFMLANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIHKVPATDVEALKSPLMGLFEKRRARKFFIYVQDYEENDTKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHRDDSYLDEPAKGFVERVKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDESGKAIGVTSEGETAKCKKVVCDPSYLSDKVHKVGKVSRAICIMSHPIPETHDSHSAQVILPQKQLGRKSDMYLFCCSYAHNVAPKGKFIAFVTTEAETDQPEVELKPGIDLLGPVDEIFYDMYDRFEPCNDHEADGCFISTSYDPTTHFETTVKDVVGMYSKITGKILDLCVDLSAASAAAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CML3</accession>
    <name>V7CML3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">E2 ubiquitin-conjugating enzyme</fullName>
            <ecNumber evidence="1">2.3.2.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G233800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.2.23" evidence="1"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CML3"/>
    <dbReference type="STRING" id="3885.V7CML3"/>
    <dbReference type="Gramene" id="ESW31379">
        <property type="protein sequence ID" value="ESW31379"/>
        <property type="gene ID" value="PHAVU_002G233800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0895">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHEFWPH"/>
    <dbReference type="OrthoDB" id="47801at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061631">
        <property type="term" value="F:ubiquitin conjugating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd23837">
        <property type="entry name" value="UBCc_UBE2O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.110.10:FF:000028">
        <property type="entry name" value="Probable ubiquitin-conjugating enzyme E2 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057733">
        <property type="entry name" value="UBE2O-like_SH3-B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057734">
        <property type="entry name" value="UBE2O-like_SH3-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057735">
        <property type="entry name" value="UBE2O-like_tSH3-B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46116">
        <property type="entry name" value="(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46116:SF45">
        <property type="entry name" value="AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23043">
        <property type="entry name" value="SH3-B_UBE2O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23044">
        <property type="entry name" value="SH3-C_UBE2O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23046">
        <property type="entry name" value="tSH3-B_UBE2O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBC core" evidence="6">
        <location>
            <begin position="677"/>
            <end position="837"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="926" mass="104261" checksum="9DC81E0E37157A5B" modified="2014-02-19" version="1">MDPVISDSDWEISSDSNSSEDQEEIDFLYGGKAQSILSSLEETIGRIDDFLSFERAFVHGDVVCSLSDPSGQMGRVTSIDVFVDLENVKGKVVKNVNSRKLLRIRSISEGDYVIKGPWIGRVQRVVDKVSVLFDDGDKCDITALERDKILPLTGNFPEDSQYPYYPGQRVEVKSSNASKSTRWLCDTWKHNRDEGTVCAVEAGMVYVNWISSVLAGFNLSVSTPQCWQASEKLTVLSCFSHANWHLGDWCMLSVVDQEEQVIQHAPICDLTMEQCVSREYKRSNFNSHIGELFIIGKIKTKVDVVWQNGEHTLGLDPENLLPVNVINNHEFWPHQFVLEKGASDYSLKTRSQRWGVVQCMDAKERTVKVHWKTISASNPDISTGEKLEETVSAYEIVEHPDYSCFFGDIMFKAAQKQLGHQADKETAKSVTDLNAEAVPKNGNQMGYQDEFPDNYFMSCIGNVTGFKDGNVEVTWATGFTTKVAPYEVLRIEKHEDLTITSTPYETNVEELTQEMIEHESLSSDQKEKDLLNGDVSRENCEENLGECSSFSLPRTALELFSSIKASIFQTLSGALLSGAVSTLPTFENENGYDFLDKKDLETCDLFAEQDPMTELQSTEDKSSYPEIIKTREKNDFPFSLDTNSPNQFKQFDVIENCPDHHFFDEGKGLSISQVKRGWGKKVQQEWSILENNLPETIYVRVFEERMDLMRAAIVGASGTPYQEGLFFFDICFPSEYPNEPPMVHYNSGGLRLNPNLYESGRICLSLLNTWTGTGTEVWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSISYNENAFLVTTKSMMYVLRKPPKNFEALVEEHFRNRSQNILLARKACLEGASIGCAFGSGKTEHENQKGTSAGFKIMLAKLFPKLLEAFCDKGIDCSQFVNLQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNL4</accession>
    <name>V7CNL4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G158800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNL4"/>
    <dbReference type="Gramene" id="ESW30511">
        <property type="protein sequence ID" value="ESW30511"/>
        <property type="gene ID" value="PHAVU_002G158800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFNDRLW"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000497">
        <property type="entry name" value="RING-H2 finger protein ATL73"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45969">
        <property type="entry name" value="RING ZINC FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45969:SF33">
        <property type="entry name" value="RING ZINC FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="154"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW30511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="25887" checksum="FF3D09D84EEAA83F" modified="2014-02-19" version="1">MLLGSLLYDQNIVPFHLMVHAPSLSFSTKPNPNFGISDQNLTPLFNSSFKTKLSPLLPHLNTLLLSLTNMGFPVGYTELLLPKVLVQLLSLLGLIRKLLTLLLCYMGFHDFFQPDIAWPEILPELQSMSAVLIREILPVVKFSEMAAAEAAESCAVCLYEFEGEDEIRRLTNCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPHHMQAAFNDRLWAASGIPQFHYHDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNU2</accession>
    <name>V7CNU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G275000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNU2"/>
    <dbReference type="SMR" id="V7CNU2"/>
    <dbReference type="STRING" id="3885.V7CNU2"/>
    <dbReference type="Gramene" id="ESW31867">
        <property type="protein sequence ID" value="ESW31867"/>
        <property type="gene ID" value="PHAVU_002G275000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW8W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWSFAPH"/>
    <dbReference type="OrthoDB" id="1921961at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000004">
        <property type="entry name" value="NAC transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31719">
        <property type="entry name" value="NAC TRANSCRIPTION FACTOR 56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31719:SF94">
        <property type="entry name" value="PROTEIN ATAF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="6">
        <location>
            <begin position="7"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="294" mass="33728" checksum="E34504F151B85BAC" modified="2014-02-19" version="1">MQGQLELPPGFRFHPTDDELVNHYLCTKCAAHSIAAPIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNNSDAVVDQKPANLPEEVLFQPEMKPDIKMYGHDHFRNSQLYMNTSDSVPRLNTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDLVSGFDFNFMEMSANDAFAPQTQYQINQPPWLDMFSYLPKTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQN7</accession>
    <name>V7CQN7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">6-phosphogluconate dehydrogenase NADP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G249900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQN7"/>
    <dbReference type="SMR" id="V7CQN7"/>
    <dbReference type="STRING" id="3885.V7CQN7"/>
    <dbReference type="Gramene" id="ESW31580">
        <property type="protein sequence ID" value="ESW31580"/>
        <property type="gene ID" value="PHAVU_002G249900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0409">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWTGEDG"/>
    <dbReference type="OrthoDB" id="435038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="entry name" value="N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="HIBADH-like_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43060">
        <property type="entry name" value="3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43060:SF13">
        <property type="entry name" value="3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 2, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="6-phosphogluconate dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="6-phosphogluconate dehydrogenase NADP-binding" evidence="4">
        <location>
            <begin position="15"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="3-hydroxyisobutyrate dehydrogenase-like NAD-binding" evidence="5">
        <location>
            <begin position="176"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="308" mass="32176" checksum="77302AB82F40CDD8" modified="2014-02-19" version="1">MGTPYPNPISPSETRIGWVGIGVMGFAMASRLLSAGYALTFYARNPSHPNALALQSQGATQAQSPAQLAQLSDVLFTMVGHPSDVRPLLLDAILPALRPNSVAVDTTSSHPELARTISSQARALGAWAIDAPVSGGDVGARDGTLAIFAAGEKKVVEWLHPIFSILGKETYVGPAGCGQSCKIANQITIGANLVGVSEGLVFAKRAGLDPKQFVEGIREGAAGSKALEIFGERMIEGDFRPGGFTEYMVKDLGMGVDVVEGGNDDDVVVLPGASLWKQLFTSMVANGQGKLGSQGVISVIERINGMNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSC6</accession>
    <name>V7CSC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Inhibitor I9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G297500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSC6"/>
    <dbReference type="SMR" id="V7CSC6"/>
    <dbReference type="STRING" id="3885.V7CSC6"/>
    <dbReference type="Gramene" id="ESW32150">
        <property type="protein sequence ID" value="ESW32150"/>
        <property type="gene ID" value="PHAVU_002G297500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFVFMNY"/>
    <dbReference type="OrthoDB" id="1537661at2759"/>
    <dbReference type="PhylomeDB" id="V7CSC6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37379">
        <property type="entry name" value="OS01G0220500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37379:SF1">
        <property type="entry name" value="OS01G0220500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inhibitor I9" evidence="1">
        <location>
            <begin position="54"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="95" mass="10850" checksum="745B9AB187416EDD" modified="2014-02-19" version="1">MGSTKMESYFVFMSYDPEYERLRADRTKRGTHELDLYLSTKHDELLATTLEPGSYNKTSSLVIVDGFAVEITQDQANELRSAKGVRVVEKNEELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU31</accession>
    <name>V7CU31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G026800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU31"/>
    <dbReference type="SMR" id="V7CU31"/>
    <dbReference type="STRING" id="3885.V7CU31"/>
    <dbReference type="Gramene" id="ESW32898">
        <property type="protein sequence ID" value="ESW32898"/>
        <property type="gene ID" value="PHAVU_001G026800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWSN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GEWDFFR"/>
    <dbReference type="OrthoDB" id="651283at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048766">
        <property type="term" value="P:root hair initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd11454">
        <property type="entry name" value="bHLH_AtIND_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000022">
        <property type="entry name" value="Basic helix-loop-helix transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH83-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223:SF338">
        <property type="entry name" value="TRANSCRIPTION FACTOR RSL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="267"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="162"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="170"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="226"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="246"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="38310" checksum="F24D0DC81CA87822" modified="2014-02-19" version="1">MEPVGAFPDGEWDCFRGMFASEDHFTSEFPLLLGGGDELNIVTEQANFCGAPEAGENELMFYSLDAHNSNSSQYISQESSYSNSSNCSGDDTVFIANPGSSNYYFSYPDHMSPNNACVYSLDEKHFAPFAPSLANIATEESVKLYEDLASDGLENSECNQMEPIVFPTKRKNDVPADGKINNRSENHKKKPRVSKDVQGCMKNKWSKKNQKNDSNREDAEETNAGSDGQSSSSNMSEDDNKENVGGATSESKSVLNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV49</accession>
    <name>V7CV49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription elongation factor spt6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G117200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the SPT6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7CV49"/>
    <dbReference type="STRING" id="3885.V7CV49"/>
    <dbReference type="Gramene" id="ESW34019">
        <property type="protein sequence ID" value="ESW34019"/>
        <property type="gene ID" value="PHAVU_001G117200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1856">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GYFYLCF"/>
    <dbReference type="OrthoDB" id="995477at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008023">
        <property type="term" value="C:transcription elongation factor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031491">
        <property type="term" value="F:nucleosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034728">
        <property type="term" value="P:nucleosome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140673">
        <property type="term" value="P:transcription elongation-coupled chromatin remodeling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09928">
        <property type="entry name" value="SH2_Cterm_SPT6_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09918">
        <property type="entry name" value="SH2_Nterm_SPT6_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.2740:FF:000002">
        <property type="entry name" value="Transcription elongation factor Spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.650:FF:000003">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.150.850:FF:000001">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3500.10:FF:000004">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000256">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.140:FF:000006">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.505.10:FF:000047">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.505.10:FF:000050">
        <property type="entry name" value="Transcription elongation factor spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.650">
        <property type="entry name" value="RuvA domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.10">
        <property type="entry name" value="SH2 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2740">
        <property type="entry name" value="Spt6, Death-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.850">
        <property type="entry name" value="Spt6, helix-hairpin-helix domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3500.10">
        <property type="entry name" value="Tex N-terminal region-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="entry name" value="YqgF/RNase H-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041692">
        <property type="entry name" value="HHH_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036860">
        <property type="entry name" value="SH2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049540">
        <property type="entry name" value="Spt6-like_S1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028083">
        <property type="entry name" value="Spt6_acidic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042066">
        <property type="entry name" value="Spt6_death-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032706">
        <property type="entry name" value="Spt6_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035420">
        <property type="entry name" value="Spt6_SH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035018">
        <property type="entry name" value="Spt6_SH2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035019">
        <property type="entry name" value="Spt6_SH2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028231">
        <property type="entry name" value="Spt6_YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055179">
        <property type="entry name" value="Tex-like_central_region"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023323">
        <property type="entry name" value="Tex-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023319">
        <property type="entry name" value="Tex-like_HTH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017072">
        <property type="entry name" value="TF_Spt6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006641">
        <property type="entry name" value="YqgF/RNaseH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10145">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10145:SF6">
        <property type="entry name" value="TRANSCRIPTION ELONGATION FACTOR SPT6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14635">
        <property type="entry name" value="HHH_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17674">
        <property type="entry name" value="HHH_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14633">
        <property type="entry name" value="SH2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14632">
        <property type="entry name" value="SPT6_acidic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21710">
        <property type="entry name" value="Spt6_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22706">
        <property type="entry name" value="Tex_central_region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14639">
        <property type="entry name" value="YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036947">
        <property type="entry name" value="Spt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00732">
        <property type="entry name" value="YqgFc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="RuvA domain 2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55550">
        <property type="entry name" value="SH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158832">
        <property type="entry name" value="Tex N-terminal region-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="S1 motif" evidence="8">
        <location>
            <begin position="1125"/>
            <end position="1196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1454"/>
            <end position="1679"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="7"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="90"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="106"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="126"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="146"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="158"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="207"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="1459"/>
            <end position="1475"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1477"/>
            <end position="1489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1497"/>
            <end position="1511"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="1582"/>
            <end position="1632"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="1644"/>
            <end position="1657"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="1658"/>
            <end position="1668"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="1669"/>
            <end position="1679"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR036947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW34019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1679" mass="189193" checksum="1D430980BDE85E22" modified="2014-02-19" version="1">MAKGVISDEEDDVELDEEEREPIDGEELEEGRDVDNEDEDEEEEGEDAYENDGFIVDDIEDEEEQDEEERADSDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKGRRDTEEEPSGLSDEEEFVGSGKVGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEEDADIGEDDEMADFIVDEEEVDENGAPMRQRKLKKKKTRQAPGVSSSALQEAQELFGDPDELILNRQKNLEMSEYRETRLEDEFEPIVLSEKYMTEQDDQIRELDIPERMQISDESTGAPPLDGSSIDEESQWIVNQLGNGAVPWISKKISNSQNNEKDGLPINKDDIIRFLELHHVQKLDIPFIAMYRKEECLSLLKDLEQPEAGDENDKTPTLKWHKVLWALQDLDKKWLLLQKRKSALESYYSKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLTVVNLQELEDPKETPEEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKHVRSHFLDHAVVSTCPTADGNTAIDSFHQFAGVKWLREKPLSKFEDVQWLLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNEYYISDSVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVGPYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLYTGSLTFRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEIMSWKLSPLESFLNQDDKFAIVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASGKKRQNKIQTFYDIKRELIQGFQDWRNQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKAICGLESGMTGILMKEDYTDDWRDVIELSDRVHEGDMLTCKIKSIQKNRYQVFLVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKISDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGDDTFEDLDEVMDRYVDPLVAHLKTMLNYRKFRKGTKSEVDELLRIEKAEYPMRIVYSFGIAHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGPSVGGGWGGGSNSEGGRRGHSYDRDRSSTPGSRTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGHNNNERQDSGYGGSRWGSNNTKDSDDGLSSFPGAKVQNSPGREAFPGGWGGGSGGGNGGGSGGWGGGSSGGSGGGNGGGNGGGNGGGSGGWGGGSGGANNNDNGVWGQETGGPSDGDQGSSGWGAAPKKAAAGNGWGSGNSGGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVB7</accession>
    <name>V7CVB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G122600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVB7"/>
    <dbReference type="STRING" id="3885.V7CVB7"/>
    <dbReference type="Gramene" id="ESW34079">
        <property type="protein sequence ID" value="ESW34079"/>
        <property type="gene ID" value="PHAVU_001G122600g"/>
    </dbReference>
    <dbReference type="OMA" id="MESCSEN"/>
    <dbReference type="OrthoDB" id="722566at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31482:SF11">
        <property type="entry name" value="CYCLIN-LIKE F-BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31482">
        <property type="entry name" value="ESTS AU081301(E20138)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="36741" checksum="D72C4B35BEC4E928" modified="2014-02-19" version="1">MNLPEPMLDCILRLLSPMELVIMSEVCTCLRDRCRSDPLWEVHIKKKWGGVIGDVAFKEWQWHITTTKEKQINHSDKQINQKGSLGSFSGTWPVLHLRSYLEDCSYLNSSLSNSFMMTLYFSLENGKFWFPAQVYRGGLVRDALVRYDSKTDNFQARQQNGGWQAVGNNIQWEILRAPPVDTPPCVRYISDCLEDLKPGDHIEIQWKSRREISYESTKYLNDAGWWYAVVGHMESCNENQNFCCCRYSDTLILEFKQYCEGSSMRRVKLVRNGEQYEEASGCYGGIRKLQSEEEIQRWEKLLPLYHQTPVYIPSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7D141</accession>
    <name>V7D141_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G190100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
        <text evidence="3">Binds 2 iron ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ribonucleoside diphosphate reductase small chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D141"/>
    <dbReference type="SMR" id="V7D141"/>
    <dbReference type="STRING" id="3885.V7D141"/>
    <dbReference type="Gramene" id="ESW34896">
        <property type="protein sequence ID" value="ESW34896"/>
        <property type="gene ID" value="PHAVU_001G190100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1567">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LGYEAMF"/>
    <dbReference type="OrthoDB" id="10248373at2759"/>
    <dbReference type="PhylomeDB" id="V7D141"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009263">
        <property type="term" value="P:deoxyribonucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01049">
        <property type="entry name" value="RNRR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.620.20">
        <property type="entry name" value="Ribonucleotide Reductase, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012348">
        <property type="entry name" value="RNR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033909">
        <property type="entry name" value="RNR_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030475">
        <property type="entry name" value="RNR_small_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000358">
        <property type="entry name" value="RNR_small_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23409">
        <property type="entry name" value="RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23409:SF18">
        <property type="entry name" value="RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00268">
        <property type="entry name" value="Ribonuc_red_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000355">
        <property type="entry name" value="NrdB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="Ferritin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00368">
        <property type="entry name" value="RIBORED_SMALL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000355-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000355-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW34896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="329" mass="37596" checksum="CCC80AE54982332D" modified="2014-02-19" version="1">MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFITHVLAFFAASDGIVLENLAARFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKNHLFRAVDTIPCVAKKAQWALRWIDATDSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLTEERVKEIVRDAVDIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYDVQNPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLNGNGGAHVFNMDEDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7D250</accession>
    <name>V7D250_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pectin acetylesterase</fullName>
            <ecNumber evidence="6">3.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G221400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Secreted</location>
            <location evidence="2 6">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the pectinacetylesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D250"/>
    <dbReference type="SMR" id="V7D250"/>
    <dbReference type="STRING" id="3885.V7D250"/>
    <dbReference type="ESTHER" id="phavu-v7d250">
        <property type="family name" value="Pectinacetylesterase-Notum"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35275">
        <property type="protein sequence ID" value="ESW35275"/>
        <property type="gene ID" value="PHAVU_001G221400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35276">
        <property type="protein sequence ID" value="ESW35276"/>
        <property type="gene ID" value="PHAVU_001G221400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4287">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSRGMRN"/>
    <dbReference type="OrthoDB" id="2015280at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009505">
        <property type="term" value="C:plant-type cell wall"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052793">
        <property type="term" value="F:pectin acetylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004963">
        <property type="entry name" value="PAE/NOTUM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21562">
        <property type="entry name" value="NOTUM-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21562:SF5">
        <property type="entry name" value="PECTIN ACETYLESTERASE 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03283">
        <property type="entry name" value="PAE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="5 6" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5010897030" description="Pectin acetylesterase" evidence="6">
        <location>
            <begin position="22"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW35276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46477" checksum="2CD1C76F1656DA16" modified="2014-02-19" version="1">MARVFWTVIAIALVFSNWVDGFGGYYEHQLNETELSLLEAHEASLSYAGSNLLLVGLTLVQNAAAKGAVCLDGTLPGYHLHRGYGSGSNRWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRIKLRYCDGASFAGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFRGLFPMTTRVKCLSDAGLFLDAIDVSGGRTLRNLYGGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHDCRLNHAKCTAPQIQYLQGFRNHMLNVIKDFARANQNGLFINSCFSHCQTERQDTWFADNSPVIKNKGIAVAVGDWYFDRAGVKVIDCPYPCDNTCHHLIFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1G6</accession>
    <name>A0ACC3P1G6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001684</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967787">
        <property type="protein sequence ID" value="KAK6645822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="45153" checksum="C4C96D7482E781F4" modified="2026-01-28" version="1">METQDRISALPDEILCHILSFLSTNDSFATSLLSKRWQPLWLFLSIIDLDNQTFIQNGRSYTFFFKFAYGILFRCRMQQPLKIARFHLTPRVCGYSNDFPYHLFKKWVRIIIQRGIEQLYIEIPRALEVPHIIWSCKTLVVLKLYRLSMDVFVKVHMPALKTLHLDFLFISKSQYFAEIFHGCPNLEDFRAYHIFLDNKLEGIEFQTMPKLVKADLKLDYVFEFPLKVVSNVEHLRFFLKLKKESFPMFENLIHLELHLESNIQWHLVIKMLNHCPKLETVMLHMPAEPYSCTSWICPQFVPECIASQLKRCSIFNYTGRRSEMEFTKYIMQNSRALQSMAIRNTIIGKNYSLSRQNKRQMLQELVMCPKSSTHCKLFFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>T2DN02</accession>
    <name>T2DN02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ALOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G095100g</name>
    </gene>
    <organism evidence="10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="10">Pod</tissue>
        </source>
    </reference>
    <reference evidence="11" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant homeotic and developmental regulators ALOG protein family.</text>
    </comment>
    <dbReference type="EMBL" id="KF033202">
        <property type="protein sequence ID" value="AGV54192.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DN02"/>
    <dbReference type="SMR" id="T2DN02"/>
    <dbReference type="STRING" id="3885.T2DN02"/>
    <dbReference type="Gramene" id="ESW21732">
        <property type="protein sequence ID" value="ESW21732"/>
        <property type="gene ID" value="PHAVU_005G095100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTET">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFHDPLM"/>
    <dbReference type="OrthoDB" id="1906822at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009299">
        <property type="term" value="P:mRNA transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009416">
        <property type="term" value="P:response to light stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040222">
        <property type="entry name" value="ALOG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006936">
        <property type="entry name" value="ALOG_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31165">
        <property type="entry name" value="PROTEIN G1-LIKE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31165:SF10">
        <property type="entry name" value="PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04852">
        <property type="entry name" value="ALOG_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51697">
        <property type="entry name" value="ALOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="3" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="ALOG" evidence="9">
        <location>
            <begin position="22"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="AGV54192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW21732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="18408" checksum="421A98AD72E8D50F" modified="2013-11-13" version="1">MSSSSGKDLGEGSSSPTGTLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDFLRYLDQFGKTKVHLQGCVFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFATSSIRLYLKEIRECQAKARGIPYKKKKKGTKANDESTSTIHFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>T2DNJ8</accession>
    <name>T2DNJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">33 kDa subunit of oxygen evolving system of photosystem II</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">33 kDa thylakoid membrane protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">OEC 33 kDa subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G024000g</name>
    </gene>
    <organism evidence="12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="12">Pod</tissue>
        </source>
    </reference>
    <reference evidence="13" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="14" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PsbO family.</text>
    </comment>
    <dbReference type="EMBL" id="KF033495">
        <property type="protein sequence ID" value="AGV54484.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DNJ8"/>
    <dbReference type="SMR" id="T2DNJ8"/>
    <dbReference type="STRING" id="3885.T2DNJ8"/>
    <dbReference type="Gramene" id="ESW28859">
        <property type="protein sequence ID" value="ESW28859"/>
        <property type="gene ID" value="PHAVU_002G024000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRXA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QIGVFPA"/>
    <dbReference type="OrthoDB" id="2860at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009654">
        <property type="term" value="C:photosystem II oxygen evolving complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010242">
        <property type="term" value="F:oxygen evolving activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008266">
        <property type="term" value="F:poly(U) RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010205">
        <property type="term" value="P:photoinhibition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010207">
        <property type="term" value="P:photosystem II assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042549">
        <property type="term" value="P:photosystem II stabilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2050.10:FF:000001">
        <property type="entry name" value="Oxygen-evolving enhancer protein 1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2050.10">
        <property type="entry name" value="photosynthetic oxygen evolving center domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.30">
        <property type="entry name" value="Photosystem II, cytochrome c-550 precursor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_B-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002628">
        <property type="entry name" value="PsbO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34058">
        <property type="entry name" value="OXYGEN-EVOLVING ENHANCER PROTEIN 1-2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01716">
        <property type="entry name" value="MSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="OMPA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="7" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0793">Thylakoid</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="257"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00078362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00080173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00081293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="AGV54484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW28859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="329" mass="34939" checksum="A84A4D86F132BCFA" modified="2013-11-13" version="1">MASSLQAAATFMQPTKVPLNSRNLKSTQCISKAFGLEPSAPKLTCSLHSDLKDLAQKCLDATKLAGFALATSALLVSGASAEGVPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVESFAFKPGKYNAKKLCLEPTSFTVKAEGVAKNAPLEFQNTKLMTRLTYTLDEIEGPFEVTPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPESFSGDFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELAKENNKSASSSKGKITLSVTKTKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADA5</accession>
    <name>V7ADA5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G016700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADA5"/>
    <dbReference type="SMR" id="V7ADA5"/>
    <dbReference type="STRING" id="3885.V7ADA5"/>
    <dbReference type="Gramene" id="ESW03469">
        <property type="protein sequence ID" value="ESW03469"/>
        <property type="gene ID" value="PHAVU_011G016700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RILFWKR"/>
    <dbReference type="OrthoDB" id="1055148at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016709">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11075">
        <property type="entry name" value="CYP77_89"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000012">
        <property type="entry name" value="Cytochrome P450 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051103">
        <property type="entry name" value="Plant_metabolite_P450s"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24298:SF917">
        <property type="entry name" value="CYTOCHROME P450 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24298">
        <property type="entry name" value="FLAVONOID 3'-MONOOXYGENASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 12 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 13" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753276" description="Cytochrome P450" evidence="14">
        <location>
            <begin position="20"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="12">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW03469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="517" mass="59454" checksum="69A79927AFC1098F" modified="2014-02-19" version="1">METWFILSVLCFCLWLILKFTCNVLFPSLPPGPPKCNFTLLRGYLTDPKTILQKLHAKYGPFFTVHVGYSHTDIFIASGFLAHQALIQHGTIFADRPKANPTNKVISSNQNDILFSFYGPRWRLLRRNLTSRILHPLKVNSFAHARKWVLAMLLQGLISDSHANSPIRVIDQFQYGMFSLMVLMCFGDKLDEKQIREIEESQRDMLVSYARYSVLNFWPPVTRILFWKRWKEFLQKRRDQDAVLIPHINARRKAKEERVSNGSSQKSDSELSYVDSLLDLQMLEDEEGLNLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKYPEIQESVVEEIRGVMVGREDREVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHKVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNIGEQKGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAILHLEYFVANFLWNFEWKAVDGDHVDLSEELQFTTVMKNPLKVHILPREIIGDILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AE40</accession>
    <name>V7AE40_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G045300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AE40"/>
    <dbReference type="Gramene" id="ESW03827">
        <property type="protein sequence ID" value="ESW03827"/>
        <property type="gene ID" value="PHAVU_011G045300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S778">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCRSALM"/>
    <dbReference type="OrthoDB" id="669248at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043459">
        <property type="entry name" value="NFD6/NOXY2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33156">
        <property type="entry name" value="OS02G0230000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33156:SF37">
        <property type="entry name" value="PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC_MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW03827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="9575" checksum="57DAE7E263A57D33" modified="2014-02-19" version="1">MMASAVRVASRSFANRSRSFVQGSTTPFVFSSSSLTRVPRSSRVLSFVRSVESLMPLHSAIANARLTSNIAFDSTCWSSLSRGFAVPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJX7</accession>
    <name>V7AJX7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G002700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJX7"/>
    <dbReference type="STRING" id="3885.V7AJX7"/>
    <dbReference type="Gramene" id="ESW05907">
        <property type="protein sequence ID" value="ESW05907"/>
        <property type="gene ID" value="PHAVU_010G002700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R8IS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIAWEVN"/>
    <dbReference type="OrthoDB" id="1416955at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004158">
        <property type="entry name" value="DUF247_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170">
        <property type="entry name" value="BNAC04G53230D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170:SF20">
        <property type="entry name" value="DUF247 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03140">
        <property type="entry name" value="DUF247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="451"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="489"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="513" mass="57914" checksum="6D2805C4CE021F6C" modified="2014-02-19" version="1">MDGVYGDTISKELAYSMSMMLDCVDNENMDTCSIHLVPEKLRKSKVEAYKPQVVSIGPLHQGKRMELQHMEKIKWRCLLHLLNRASVGADEALKKCGSAMLKLDKVVRASYSVDKLEFDSSDLAKCMVLDGCFLLELLISGSPELDNKIKTTSSDSSPGGHVLRGGKVLSDLTLLENQIPLVVLEVLSSKLFPHVFGGYGDTHGDILIQQLALSILGYDYASLGSRCGKLNVNNFLELVHAFIDNEKGGTKRDVKIPIDSGEDESNRRLKLNRCANELLVAGVTIKGKINAQMEDSNIAAMNRFDMRITFSDGKLEIPQLRITETTEAKWRNFIAWEVNKNKVEKYNGERALSEDMSEARTRFHFLCYAWFFQSLICSVDDVKLLLDREVIWVAVDKKGRRLKSNEDLVDLFCKMSEGVSESDVEETDMDPWISEVILQLNSYRITLCTTATFRIMWHVLKGSLTLFCYNWMRSFRLLRRDYIPTRWKLIAVIAAAAGVILTAAQTFFSARGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK38</accession>
    <name>V7AK38_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G002400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEFL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK38"/>
    <dbReference type="Gramene" id="ESW05904">
        <property type="protein sequence ID" value="ESW05904"/>
        <property type="gene ID" value="PHAVU_010G002400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDIV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VECKQEC"/>
    <dbReference type="OrthoDB" id="1869961at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031640">
        <property type="term" value="P:killing of cells of another organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010851">
        <property type="entry name" value="DEFL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33830:SF21">
        <property type="entry name" value="DEFENSIN-LIKE PROTEIN 165-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33830">
        <property type="entry name" value="DEFENSIN-LIKE PROTEIN 184-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07333">
        <property type="entry name" value="SLR1-BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0295">Fungicide</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753475" description="Knottin scorpion toxin-like domain-containing protein" evidence="6">
        <location>
            <begin position="28"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="85" mass="9850" checksum="7DCD63E3B01E2E11" modified="2014-02-19" version="1">MTKFFFSQVVVFFLIISVISRISVTDAQRCQKVLDPTGCTLQQCQSDCFKMFQNFRGVGKCIRNNNNNTYECMCIYDCHAKPKFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK80</accession>
    <name>V7AK80_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G101900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK80"/>
    <dbReference type="SMR" id="V7AK80"/>
    <dbReference type="STRING" id="3885.V7AK80"/>
    <dbReference type="Gramene" id="ESW04521">
        <property type="protein sequence ID" value="ESW04521"/>
        <property type="gene ID" value="PHAVU_011G101900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSY8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EDTNHPK"/>
    <dbReference type="OrthoDB" id="2020995at2759"/>
    <dbReference type="PhylomeDB" id="V7AK80"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000002">
        <property type="entry name" value="probable WRKY transcription factor 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429:SF50">
        <property type="entry name" value="WRKY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31429">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR 36-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="7">
        <location>
            <begin position="329"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="230"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="508"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="562"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="238"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="275"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW04521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="599" mass="64893" checksum="28324138A8A08CF3" modified="2014-02-19" version="1">MVRGGGLSMDSDPIGSFFLHKPIVLNSFPEDTNHPKWKLSPHNNMEATVSTKDTIPFQVNLSCSPNNHDSSPSSLHNRTEMDFFSDNNKKEHNVSASASNHHHSTTPPTLEFKVNTGLNLLTANTSSDQSMVDDEISPNSEDRRAKNEVAALQAELERMKRENQKLRNTLDQVNVNYDALQMHFMNLMQQQKAEEAEEQEVIGGKLEEKKQGESSGVLVPRQFMDLGLATNADTDEPSSSSGGRSQDRSGSPHAEVASKELGTGKSEIVNDEGYDQEKKEYGRGVESEDSPSGHAFSGDKVPRFSPQKSNVEQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADSLMNANLLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQLPRHPNQLQIPLQGVPQNFANSPASLMPQIFGQALYNQSKFSGLQMSHDADPSQFGNHPQQVPPHLTDTVSAAIAADPNFTAALAAAITSIIGGAQQHNTNSNNSNNSNNNGNMTASNSTGNGNITSSNNSNGKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALB7</accession>
    <name>V7ALB7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G016100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALB7"/>
    <dbReference type="SMR" id="V7ALB7"/>
    <dbReference type="Gramene" id="ESW06055">
        <property type="protein sequence ID" value="ESW06055"/>
        <property type="gene ID" value="PHAVU_010G016100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RRJS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GCERKIF"/>
    <dbReference type="OrthoDB" id="1418158at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34427:SF5">
        <property type="entry name" value="DUF4283 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="2">
        <location>
            <begin position="6"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="647"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="647" mass="73175" checksum="A70B1185F7382A95" modified="2014-02-19" version="1" fragment="single">MNQGGTSFFFSNFPFDLRELDLWKIFRRWGRVNDLFISNRLNIKKQRFGFVRFQGVQNIKELEYHLNTIWIGSWKLNVNRPKYNRATDTRKEWNVKLKEKVTVAEKETKKEWREKGSNTYANAVTHGYRSRAQTQNKENVHAIHFRAEETPREWLRKCYIGRVSDLSKVSSLNESQIYGGFHVLLKGENETKINEAIAENKDWFEELFDTIIPWEEQFVAVDKLVWVRCRGLPLKLWNFDCFKHIAALLGTLVEIDEATLALEELEYARFKIRVPVGCEAKITSYMKINEVLYQVSVEEESTVPDYKLCQCHWTEGSEGMDSEEGSIASNVSARLGSRDFEDGSKVAEENLMVEPIVTVDGSEAISDRPIGSLSVPNFSTIIRKDDLGANSPTTLSRADVDKRIGLPELAQDGLVYATCAEKGGGCERKIFLEALSKSGPTVYSEEKLWNGSLGRLPTSENFISLDELEQRGLSGIDKVTSHQVNARNRATSVLPSISFEVTKEKRRSTPCTTNLAAEGIADLETQISTPAEGNKGGFHGSSKSVSRVEDSLANHQKKHVCNSINSNSFETMDRRVFWVGESSKSSKRDERKNIRSTLSQISNSVSDTAIDNCNSLFWLKHGSLETIRVWELAKQLGASCGEEGKVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALK9</accession>
    <name>V7ALK9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G045100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALK9"/>
    <dbReference type="Gramene" id="ESW06399">
        <property type="protein sequence ID" value="ESW06399"/>
        <property type="gene ID" value="PHAVU_010G045100g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="129"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="20851" checksum="970D20C97B8564F6" modified="2014-02-19" version="1">MLHILIASKFSFFNQLSLKPFLSALSALRLRGTMVSQLALVSNSENRVRETFPITNFPSACELVPPKLTKGARLNAKLACLPSTSWTRSLFDKLGINTTLPLSLKLLRPPTTAPLFCIIAPSSLPLTSPAPSQPLSSPLHPELPSPAVATTPIVEGDVDRRLQPAAALKSTNKTSPLVIAAPKTPLKNDENPPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMS2</accession>
    <name>V7AMS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G076900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMS2"/>
    <dbReference type="STRING" id="3885.V7AMS2"/>
    <dbReference type="Gramene" id="ESW06789">
        <property type="protein sequence ID" value="ESW06789"/>
        <property type="gene ID" value="PHAVU_010G076900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CEPISIR"/>
    <dbReference type="OrthoDB" id="1374156at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000126">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47952:SF3">
        <property type="entry name" value="CYTOCHROME P450 71B3-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47952">
        <property type="entry name" value="TRYPTAMINE 5-HYDROXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="202" mass="22961" checksum="053796CCFCA363A5" modified="2014-02-19" version="1" fragment="single">DLLLASTDSSSASLVWNMTALLKNPRVMKKVQEEIRSVGGRKEFLDEDDVQKFPYLKAVIKETFRYYPPGPILVQRETNEACVIGGYEIPAKTTLYVNAWAIHKDPDNWKNPFEYYPERFLDSSVTYRGQDYEFLPFGSGRRVCPGMPMAIASLDLILANLLNAFDWELPAGMKPDDLDVLTDPGLTVHKRNPLHLLAKRVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN58</accession>
    <name>V7AN58_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G194900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN58"/>
    <dbReference type="SMR" id="V7AN58"/>
    <dbReference type="Gramene" id="ESW05616">
        <property type="protein sequence ID" value="ESW05616"/>
        <property type="gene ID" value="PHAVU_011G194900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKILTHE"/>
    <dbReference type="OrthoDB" id="1733640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="7">
        <location>
            <begin position="15"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="6">
        <location>
            <begin position="172"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="8">
        <location>
            <begin position="417"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="9">
        <location>
            <begin position="673"/>
            <end position="797"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1153" mass="131973" checksum="855F666E400221FB" modified="2014-02-19" version="1">MPVLETLGGALFGAVLQLLFDKLDSHQLLHYFRGRKLDVKLLKKLKRKLMDINAVIDDAEQKQFTNSLVKQWLHEVREALYDAEDLMEQIDYEFSKSELKAEFQSSASKVSSFESKIIELLDDLESLLDQKLVQDFKISSGVRSGLANNVSRKTYESSSLVAEEVIYGRDEYKEIILNWLTSDNGNHNQLSIHSIVGMGGMGKTTLAQHVYNHPMIKAKFAIKAWVCVYDEFDAIHKSSDDSRNLEMVQGRLKESLTGRKFLLVLDDVWNEDRDQWKSLQTPLKYAAKGSKILVTTRSNKVASTLESNNIHQLKQLQEDHSWQVFAKHAVQDDSSKLNSELKDIGMKILEKCQGLPLALETIGSLLQSKSSVVEWEGVLRSNIWQLPIENSKIIPALLLSYYHLPSHLKRCFTYCALFPKDHEFDKENLILSWMAENFLQCSQHSKSPEEVGEQYFNDLLSRSFFQQSVTQDMINNKTFFVMHDLLNDLAKYVSGEMCYRLGVDIPGSVPTTTRHFSAIKNHVECDEYRGLCDAKRLRTFMSISRTFGMSIQDLISNFKCLRLLSLFDCRNIKEVPDTISDLIHLRSLELSHCHIKRLPDSICSLYNLQVLKLNICIFLKELPLTLHELPNLRRLELIGTYLRKAPVLLGKLKNLQVWMGGFEVGKSSSEFSIQQLGKLDLHGKLSITNLENIVDPWEAFVADLKNKTHLVALRLKWNLKVNSEDSIKEREVLENLQPSRHLEQLSIIGYCGTQFPGWLSEKFLLNIVFLKLYNCKYCQWLPSLGLFTFLKHLEIYGLDKIVRIDVDFYGNSFSAFASLETLSFNDMKEWEEWQCITGAFPSLKQLSVAGCPKLKGHLPEHLPRLKELSIYRCEQLVASTPAIEIEGFLVSDTLLESLYISSCSGMNIPINHCYDFLLKLVINQCCHALMNFPLDLFPKLCVLSLNKCHNLQMISQGHRHDHLNMLTIKKCCQFESFPIEGLFAPQLETLYIEEMEKLKSMPKRMSALLSSLNYLEINNCPRVELSEGCLPLNLKYISLLNCFKLVASLNKGVWGTNPSLESLFIGKVDVECFPDEGLLPLSLTELRINDCPNLKKLDYKGLCHLSSLQTMFIRNCPLLQCFPEEGLPESISELHIEDCPLLHQRCKKQEGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7API3</accession>
    <name>V7API3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G1407000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7API3"/>
    <dbReference type="STRING" id="3885.V7API3"/>
    <dbReference type="Gramene" id="ESW07567">
        <property type="protein sequence ID" value="ESW07567"/>
        <property type="gene ID" value="PHAVU_010G1407000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3120">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AQICEWS"/>
    <dbReference type="OrthoDB" id="10267182at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006384">
        <property type="entry name" value="HAD_hydro_PyrdxlP_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016965">
        <property type="entry name" value="Pase_PHOSPHO-typ"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01489">
        <property type="entry name" value="DKMTPPase-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01488">
        <property type="entry name" value="HAD-SF-IB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20889:SF17">
        <property type="entry name" value="2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20889">
        <property type="entry name" value="PHOSPHATASE, ORPHAN 1, 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06888">
        <property type="entry name" value="Put_Phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031051">
        <property type="entry name" value="PyrdxlP_Pase_PHOSPHO2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="9"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="11"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR031051-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR031051-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR031051-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="237" mass="26792" checksum="001B6EFEA3FD6CD4" modified="2014-02-19" version="1" fragment="single">MAEIMVIFDFDSTIIECDSDNWVLDDTALTQNFYQLLPTMHWNPLMDRMMKELHSQGKTIEDIVEILKRTPMHPCIVPAIEAAYSLGCDLKIVSDANIFFIETILKHHGVWNCFSEIICNPSHVKEGSLNICPYHDYLKSSHGCNLCPPNMCKGVVIERIQNSMAGAGKKKVIYLGDGNGDFCPSLKLKENDYLMPRTGFPLCDLVSKNSTKIKAEVHGWRDGKELQHVLLHLINKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7APK7</accession>
    <name>V7APK7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G112600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APK7"/>
    <dbReference type="SMR" id="V7APK7"/>
    <dbReference type="Gramene" id="ESW07235">
        <property type="protein sequence ID" value="ESW07235"/>
        <property type="gene ID" value="PHAVU_010G112600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSG6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTHTRCF"/>
    <dbReference type="OrthoDB" id="438440at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008970">
        <property type="term" value="F:phospholipase A1 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043367">
        <property type="entry name" value="PLIP1/2/3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46483:SF1">
        <property type="entry name" value="PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46483">
        <property type="entry name" value="PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fungal lipase-type" evidence="3">
        <location>
            <begin position="393"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="317"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="327"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW07235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="671" mass="74923" checksum="0789322733FF77AE" modified="2014-02-19" version="1">MSYSAVSIPTTSTTSSTTMDITKENKVFLHSLSNKGLCNHSTITRSHSSNLLCCSSNRFRGTSMEPKHKSRHSIVVFPLQLSVSILPNPLRSFLFDPETRREMNMGQKGINLKENMVASTAEVTINRANWVKRLTGIKTYWKRPEESMDSDIVSKHDNECDRDEDDNVCVAGYEEGNGKEEDGQEVTFDRDSFSKYLVPVPWSDTKLFSKLAFLCHMAYVIPHIKAKDLGRYYGLQFVTSSLKKRKKKKGDVTKNKAKLDQDSICVPMDASVASQDGSEKGDHNEEKHQMKLAYDLTASAASYLQSRAKDLLSLASKSKQNSGNEDFNGREDSPHEEADETPQVDKSKFGVNVAALTMTVVAAAGSAMDLQLLRSSSCEWFVCDDPNTHTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMDHLKRHGDSAKLQFTGHSLGGSLSLLVYLMLLTRKVVSPSTLLPVVTFGSPFVLCGGQKLLNELGLDDSFIHCVMMHRDIVPRIFSCSFPNHVITVLKRLIKGSFVSHPCLMEKKLLYSPLGKIFILQPDEKTSPPHPLLPSGSGFYVVDSSRCGYSPIVLRTFLNQPHPIETLSNPKAYGSDGTVLRDHDCNNYLIAVNGVLAQNSKIVVRTRRSQQPRKIFKRKMRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ38</accession>
    <name>V7AQ38_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Polygalacturonase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G039000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ38"/>
    <dbReference type="SMR" id="V7AQ38"/>
    <dbReference type="STRING" id="3885.V7AQ38"/>
    <dbReference type="Gramene" id="ESW06331">
        <property type="protein sequence ID" value="ESW06331"/>
        <property type="gene ID" value="PHAVU_010G039000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRN7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFHFVID"/>
    <dbReference type="OrthoDB" id="187139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31375">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6 8" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753638" description="Polygalacturonase" evidence="9">
        <location>
            <begin position="23"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="327" mass="34590" checksum="C09ABAC84F8567D7" modified="2014-02-19" version="1">MAQIVLHALLLFLFTFTPATVAEGATPNVVNFGAKPDGETDSTNAFLSAWGRACSSTTPTTIHVPLGRFSVGKVVFKGPCKNKGITVRIDGALVAPSNYDVIGNGGNWLHFDEVDGVAVFGGVLDGQGIGLWECKRSGKICPTGATNLGFSNWKNIVMNGVRCVKSQMFQIVIDRCENVRVEGVKVSAAGNSPNTDGIHVQLSSRVTILNSTIATGDDCISIGPGTTNLWIQNIACGPGHGISVGNELEEAGVENVTVKAVTFAGTENGVRIKSWGRPSNGFARNILFQHVTMLNVQNPIVIDQNYCPHQNNCPGQVSGVEITNVTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ73</accession>
    <name>V7AQ73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Auxin-induced protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G151700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimers and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Aux/IAA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ73"/>
    <dbReference type="STRING" id="3885.V7AQ73"/>
    <dbReference type="Gramene" id="ESW07704">
        <property type="protein sequence ID" value="ESW07704"/>
        <property type="gene ID" value="PHAVU_010G151700g"/>
    </dbReference>
    <dbReference type="OMA" id="MFMESCR"/>
    <dbReference type="OrthoDB" id="642974at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033389">
        <property type="entry name" value="AUX/IAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003311">
        <property type="entry name" value="AUX_IAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734:SF87">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02309">
        <property type="entry name" value="AUX_IAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PB1" evidence="11">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="8111" checksum="61D52759AB35A5CD" modified="2014-02-19" version="1">MLAVEALQNAEKSEHVPIYEDKDGDWMLVGDVPWEMFVESCKRLRIMKRADAKGFGLQPKGSLKGFIESVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARL5</accession>
    <name>V7ARL5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase type 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G027100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARL5"/>
    <dbReference type="STRING" id="3885.V7ARL5"/>
    <dbReference type="Gramene" id="ESW08199">
        <property type="protein sequence ID" value="ESW08199"/>
        <property type="gene ID" value="PHAVU_009G027100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SCYFIGC"/>
    <dbReference type="OrthoDB" id="271595at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106335">
        <property type="term" value="F:tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030488">
        <property type="term" value="P:tRNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051422">
        <property type="entry name" value="AlkB_tRNA_MeTrf/Diox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13069">
        <property type="entry name" value="ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13069:SF21">
        <property type="entry name" value="ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransferase type 11" evidence="4">
        <location>
            <begin position="178"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="297"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW08199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="429" mass="47411" checksum="22C4452F00F788B4" modified="2014-02-19" version="1">MDLYSLDPTKFVKPGFGVCCRVSATIHSKQASTTDDVRHFRILFISRALCHTDWLMIHSVLKTSRFLNPHREALGLTSVVGDFVCHLALSSMKQINSKVDSSLCTLAPSKEPSIADSVSASGNGTISSMSVQSTPEIEKKFVHHVYDAIAPHFSATRFAKWPKVSSFLSSLPLGSLLLDAGCGNGKYLGLNQDCSFIGCDISPSLIKICSDRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGHVLITVWAVEQEDTTLITKWTPLPEKYVEEWVGPGSPRARTPSPLPLESIPESEESSTGENIKVCSETNVYRDLEEEKHIKNQQEYFVPWHLPYHRAEISGASAHALAAGLATKDDRKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASK9</accession>
    <name>V7ASK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G034800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE associated with ER-derived vesicles.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the BET1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASK9"/>
    <dbReference type="SMR" id="V7ASK9"/>
    <dbReference type="STRING" id="3885.V7ASK9"/>
    <dbReference type="Gramene" id="ESW08295">
        <property type="protein sequence ID" value="ESW08295"/>
        <property type="gene ID" value="PHAVU_009G034800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACFFLVY"/>
    <dbReference type="OrthoDB" id="261831at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15841">
        <property type="entry name" value="SNARE_Qc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000056">
        <property type="entry name" value="Bet1-like protein At4g14600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12791">
        <property type="entry name" value="GOLGI SNARE BET1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="14">
        <location>
            <begin position="46"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00037962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00060029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW08295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="133" mass="15139" checksum="9A50ABD3DAE7A648" modified="2014-02-19" version="1">MSTNPHRGASFYADAAHYRSREGLSTRPVASSDEIQLHIDPGIDFDDEIIGLRGQVRKLKNVAEDIGSEVKHQRDFLEQVQMTMLKAQAGVKNNLRRLNKSIVRNGANHVVHVIVFALVCFFMVYFWSKLSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUX8</accession>
    <name>V7AUX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GOLD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G123400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the EMP24/GP25L family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUX8"/>
    <dbReference type="SMR" id="V7AUX8"/>
    <dbReference type="STRING" id="3885.V7AUX8"/>
    <dbReference type="Gramene" id="ESW09384">
        <property type="protein sequence ID" value="ESW09384"/>
        <property type="gene ID" value="PHAVU_009G123400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1691">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHRENTT"/>
    <dbReference type="OrthoDB" id="759142at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015720">
        <property type="entry name" value="Emp24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009038">
        <property type="entry name" value="GOLD_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22811">
        <property type="entry name" value="TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01105">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01190">
        <property type="entry name" value="EMP24_GP25L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50866">
        <property type="entry name" value="GOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753776" description="GOLD domain-containing protein" evidence="10">
        <location>
            <begin position="32"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="189"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="GOLD" evidence="11">
        <location>
            <begin position="41"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="147"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW09384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="221" mass="24998" checksum="6A5ED156730BE4AA" modified="2014-02-19" version="1">MAKDINLSSGTRNPLLLFLCVTTLMLLRTEAIWLTIPSKGTKCMSEEIQAHVVVLADYYVVADDVKGHQPQTVSAKVTSPYGNNLHHNENVTHGQFAFTTTESGNYVACFWVDTKHQESGGETTISLEWKTGIAAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREEEMREVSETTNARVAWFSILSLGLCICVSGLQLWYLKRFFRKKKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVJ4</accession>
    <name>V7AVJ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DEAD-box ATP-dependent RNA helicase 50</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G118200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVJ4"/>
    <dbReference type="SMR" id="V7AVJ4"/>
    <dbReference type="STRING" id="3885.V7AVJ4"/>
    <dbReference type="Gramene" id="ESW09325">
        <property type="protein sequence ID" value="ESW09325"/>
        <property type="gene ID" value="PHAVU_009G118200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPANNDP"/>
    <dbReference type="OrthoDB" id="10256233at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006968">
        <property type="term" value="P:cellular defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071369">
        <property type="term" value="P:cellular response to ethylene stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071395">
        <property type="term" value="P:cellular response to jasmonic acid stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071446">
        <property type="term" value="P:cellular response to salicylic acid stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00268">
        <property type="entry name" value="DEADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044742">
        <property type="entry name" value="DEAD/DEAH_RhlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47960">
        <property type="entry name" value="DEAD-BOX ATP-DEPENDENT RNA HELICASE 50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="6">
        <location>
            <begin position="180"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="7">
        <location>
            <begin position="400"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="40"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="40"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="89"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW09325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="552" mass="61335" checksum="1F9D50F5B43D9C8E" modified="2014-02-19" version="1">MVVGRVVVLNPPSNLFHNPSSAATLIPPHTRLLSFSASAASSSSSSSAANRTRHTPTTNNDSPFSAFGRLKDQKPKTVLHRSKDRRREEEEEDDNDDDEDYNENHAAPRRRPSQSRSRSGGRERGGWDIIPRFPSQAKTTTDTNFFSLKSFKEVGCADYILQSLQKIFLTRPSHVQAMAFAPVLSGKTCVIADQSGSGKTLAYLVPIIQRVRQEELEGRSQSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLESLQQGVDVLIATPGRFLYLMNEGFLQLTNLRCAVLDEVDILFGDEDFEVALQRLISSSPVDTQYLFVTATLPKNVFTKLVEVFPDCEMIMGPGMHRISSRLEEILVDCSGEDEQEKTPDTAFLNKKTALVQLVEESPVPRTIVFCNKIETCRKVENSLKRFDRKGNRMQVLPFHAAMTQESRLASMAEFTRSPSQGVSQFMVCTDRASRGIDFAGVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLASKIMERSRKGHPLHDVPSPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVP0</accession>
    <name>V7AVP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HECT-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.26</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G034900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the UPL family. TOM1/PTR1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.26" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7AVP0"/>
    <dbReference type="STRING" id="3885.V7AVP0"/>
    <dbReference type="Gramene" id="ESW08296">
        <property type="protein sequence ID" value="ESW08296"/>
        <property type="gene ID" value="PHAVU_009G034900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0939">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKGFAWD"/>
    <dbReference type="OrthoDB" id="8068875at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000209">
        <property type="term" value="P:protein polyubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00078">
        <property type="entry name" value="HECTc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14327">
        <property type="entry name" value="UBA_atUPL1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1750.10:FF:000026">
        <property type="entry name" value="E3 ubiquitin-protein ligase HACE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2160.10:FF:000001">
        <property type="entry name" value="E3 ubiquitin-protein ligase NEDD4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.10:FF:000067">
        <property type="entry name" value="E3 ubiquitin-protein ligase UPL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2410.10:FF:000010">
        <property type="entry name" value="E3 ubiquitin-protein ligase UPL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1750.10:FF:000003">
        <property type="entry name" value="E3 ubiquitin-protein ligase UPL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1630">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.10">
        <property type="entry name" value="DNA helicase RuvA subunit, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2160.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2410.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.10">
        <property type="entry name" value="Hect, E3 ligase catalytic domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010309">
        <property type="entry name" value="E3_Ub_ligase_DUF908"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010314">
        <property type="entry name" value="E3_Ub_ligase_DUF913"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050409">
        <property type="entry name" value="E3_ubiq-protein_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000569">
        <property type="entry name" value="HECT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035983">
        <property type="entry name" value="Hect_E3_ubiquitin_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025527">
        <property type="entry name" value="HUWE1/Rev1_UBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003903">
        <property type="entry name" value="UIM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254">
        <property type="entry name" value="HECT DOMAIN UBIQUITIN-PROTEIN LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11254:SF435">
        <property type="entry name" value="HECT-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06012">
        <property type="entry name" value="DUF908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06025">
        <property type="entry name" value="DUF913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00632">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22562">
        <property type="entry name" value="UBA_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14377">
        <property type="entry name" value="UBM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00119">
        <property type="entry name" value="HECTc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00165">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56204">
        <property type="entry name" value="Hect, E3 ligase catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="UBA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50237">
        <property type="entry name" value="HECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50330">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="UBA" evidence="9">
        <location>
            <begin position="1297"/>
            <end position="1338"/>
        </location>
    </feature>
    <feature type="domain" description="HECT" evidence="10">
        <location>
            <begin position="3303"/>
            <end position="3644"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="720"/>
            <end position="739"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="932"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="995"/>
            <end position="1031"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1715"/>
            <end position="1753"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2032"/>
            <end position="2077"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2104"/>
            <end position="2131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2145"/>
            <end position="2199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2404"/>
            <end position="2431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2506"/>
            <end position="2562"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2586"/>
            <end position="2610"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="2706"/>
            <end position="2728"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="936"/>
            <end position="947"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="995"/>
            <end position="1017"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1715"/>
            <end position="1728"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="2042"/>
            <end position="2077"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="2117"/>
            <end position="2131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="2149"/>
            <end position="2182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="2183"/>
            <end position="2197"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="2586"/>
            <end position="2604"/>
        </location>
    </feature>
    <feature type="active site" description="Glycyl thioester intermediate" evidence="7">
        <location>
            <position position="3611"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00034494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW08296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="3644" mass="401972" checksum="DFF33220770402C1" modified="2014-02-19" version="1">MTSVRSSWPSRLRQLLSSEGSIGPSVKLDSDPPPKIKTFIDKVIQCPLQDIAIPLFGFQWEYNKGNFHHWRPLLLHFDTYFKTYLSGRNDLTLADNLEVDIPLPKHAILQILRVIQIVLENCPNKSSFDGLEHFKLLLASTDPEIIIATLETLAALVKINPSKLHGSAKMVGCGSVNSYLLSLAQGWGSKEEGMGLYSCIVANEKAQDEALCLFPSDVGNGSDQSNYCMGSTLYFELHVPIAQSKEQNVDTVSSSLRVIHIADMHLRKEDDLTMLKQCIEQYNVPPELRFSLLTRIRYARAFRSARISRLYSRICLLAFVVLVQSSDAHDELVSFFANEPEYTNELIRVVRSDETISGSIRTLVMLALGAQLAAYTSSHERARILSGSSMNFTGGNRMILLNVLQRAILSLKSSSDPTSFAFVEALLQFYLLHVVSTSSGSNIRGSGMVPTFLPLLEDSDPAHIHLVCLAVKTLQKLMDCSNSAVSLFKELGGVELLAQRLQIEVHRVIGLVGENDNVMLTGEKSRLSSHQLYSQKRLIKVSLKALGSATYAPANSTRSQHSHDSSLPATLVMIFQNVDKFGGDIYYSAVTVMSEIIHKDPTCFSSLHEMGLPNAFLSSVVSGILPSSKALTCIPNGLGAICLNAKGLEIVRETSSLQFLANIFTSRKYVLAMNEAIVPLANSVEELLRHVSSLRSTGVDIIIEIIHKIASFGDGIDTGSSSGKANEDSTMENNSEDKGKESRCCLVGTTETTAEGISDEQFIQLCIFHLMVLIHRTMENSETCRLFVEKSGIEALLKLLLRPTIAQSSDGMSIALHSTMVFKGFAQHHSTPLAHAFCTSLREHLNEALTGFGASSRPLLLDPKMTIDKIFSSLFLVEFLLFLAASKDNRWVTALLTEFGNGNKDVLENIGHVHREVLWQIALLENAKPDIEDDGSCSTNDSQQTDVDANETAEQRYNSIRQFLDPLLRRRTSGWSVESQFFDLINLYRDLGRAPNSQHRSNSVGATNRRLGSSNLLHPSESADVPGSANKKECDKQRTYYTSCCDMVRSLSFHITHLFQELGKVMLQPSRRRDDIVSVSPTSKSVASTFATIALDHMNFGGHVEEASISTKCRYFGKVIDFIDGILMERSESCNPILLNCLYGHGVIQSVLTTFEATSQLLFAVNRTPASPMETDDGNVKHDDKDDTDHLWIYGSLASYGKFMDHLVTSSFILSSFTKPLLAQPLSGDTPFPRDAEIFVKVLQSMVLKAVLPVWTHSQFVDCSHEFISNVISIIRHVYSGVEVKNVNVSARITGPPPNETTISTIVEMGFSRPRAEEALRHVGSNSVELAMEWLFSHPEDMQEDDELARALAMSLGNSESEPKDVAASDNVPQLEEEVVHLPPVDELLSTCTKLLQKEPLAFPVRDLLMMICSQNDGQYRSNVVTFIVDRIKECGLISGNGNNTMLSALFHVLALILNEDVVSREAASKSGLINIASDLLYQWDSSLGDREKHHVPKWVATAFLALERLLQVDQKLNYEIAELLKKEVVNVQQTSVLIDEDKQHKLQSALGLSTKYADVLEQKRLVEIACSYMKNQVPSDTMHAILLLCSNLTRNHSVALTFFDAGGLSSLLSLPTSSLFPGFDNVAAGIVRHVIEDPLTLQQAMESEIKHSLIAAPNRHPNGRVNPRNFLLSLASVISRDPIIFMQAAQSVCQVEMVGERPYIVLLKDRDKEKSKEKDKSHNHDGKVCLGSTTTTAPGNVHGKLHDSNSKNVKYKKPTQSFVNVIELLLESICTFVAPSLKDDNVSNVVRGSPTSSDMDIEVSTVRGKGKAVATVSGGNETSCEEASASLAKIVFILKLLMEILLMYSSSVHVLLRRDAEMSSTKGINQKNHSGFGAGGIFYHILRNFIPHSRNSKKDKKGDGDWRQKLATRANQFMVAACVRSSEARRRVFTEISHIINEFVDSCNSVMPKPPCNEIQVFVDLLNDILAARTPAGSSISSEASVTFMDAGLVKSFTHTLQVLDLDHADSSKVATGIIKALELVTKEHVHSVESSAGRGDNQTKPSDPSQSGRMDNIGHTSQSQSMETSQANHDSLQVDRVGSYNVIQSYGGSEAVIDDMEHDLDGGFVPSNEDEFMHETGDDSRGRETGIENVGLQFEIQSHGQENLDDEDEGDMSGDEGEDVDEDDEDDEEHNDLEEDEVHHLPHPDTDHDDHEIDDDFDEVMEEEEEEDEDEDDEDGVILRLEEGINGINVFDHIEVFGRDNSFPNESLHVMPVEVFGSRRPGRTTSIYSLLGRSGDNAAPSRHPLLVGPSSSFHPSSVQSDSITESSTGLDNIFRSLRSGRHGHRLNLWSDNNPQSSGSNAGAVPQGLEEFLVSQLRRPAADKSSDNNVAEAGPQNKVEVHHMHNSAGSQLEIPVENNAIQGGGDDVTPASIDNTENNADIRPVGNGTLQTDVSNTHSQAVEMQFEHNDASVRDVEAVSQESSGSGATFGESLRSLDVEIGSADGHDDGGERQVSADRIAGDSQAARTRRATVPFGHSSPVGVRDASLHSVTEVSENSSRDADQEGPAAEQQVNRDTASAAIDPAFLDALPEELRAEVLSAQQGQVAQPSNAESQNNGDIDPEFLAALPPDIRAEVLAQQQAQRLHQSQELEGQPVEMDTVSIIATFPSELREEVLLTSSDAILANLTPALVAEANMLRERFAHRYSRTLFGMYPRSRRGETSRREGIGSVPDGAGGSITSRRSAGAKVVEADGAPLVDTEALHAMIRLFRLVQPLYKGQLQRLLLNLCAHSETRVSLVKILMDLLLLDVRKPASYFSAVEPPYRLYGCQSNVMYSRPQSFDGVPPLLSRRILETLTYLARHHPYVAKILLQFRLHHPGLREPDNADVARGKAVMVVEDEMNAGYISIAMLLGLLKQPLYLRSIAHLEQLLNLLDVIIDSARSKSSSSDRSQISTEPVSGPQISAMDVDVNIDSVISSATDASPQVNESSKPTTSSNKECQAQQVLCDLPQAELQLLCSLLALEGLSDNAYGLVAEVMKKLVAIAPIHCKFFVTHLAEAVRNLTSSAMDELRTFSEAMKALLSTTSSDGAAILRVLQALSSLVTLLAEKENDGITPALSEVWGINSALEPLWHELSSCISKIEAYSESVSESITPSRTSVSKPSNVMPPLPAGSQNILPYIESFFVFCEKLHPAQSGASTVTNVPVISDVEDASTSGIRQKTSGSATKLDEKHAAFAKFSEKHRKLLNAFIRQNPGLLEKSFSLMLKTPRFIDFDNKRSHFRSKIKHQHDHHHSPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDRGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPAYFRNLKWMLENDISDVLDLTFSIDADEEKLILYERTEVTDYELIPGGRNMKVTEENKHQYVDLVVEHRLTTAIRPQINAFLEGFNELIPRELISIFNDKELELLINGLPDIDLDDLRANTEYSGYSGASPVIQWFWEVVQSFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSSDHLPSAHTCFNQLDLPEYPSKQHLEKRLLLAIHEANEGFGFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXE4</accession>
    <name>V7AXE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histone H2A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_009G199100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="4 9">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the histone H2A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXE4"/>
    <dbReference type="SMR" id="V7AXE4"/>
    <dbReference type="STRING" id="3885.V7AXE4"/>
    <dbReference type="Gramene" id="ESW10317">
        <property type="protein sequence ID" value="ESW10317"/>
        <property type="gene ID" value="PHAVU_009G199100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1757">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIKINLA"/>
    <dbReference type="OrthoDB" id="9421954at2759"/>
    <dbReference type="PhylomeDB" id="V7AXE4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00074">
        <property type="entry name" value="HFD_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000005">
        <property type="entry name" value="Histone H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002119">
        <property type="entry name" value="Histone_H2A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032454">
        <property type="entry name" value="Histone_H2A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032458">
        <property type="entry name" value="Histone_H2A_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23430">
        <property type="entry name" value="HISTONE H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16211">
        <property type="entry name" value="Histone_H2A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00620">
        <property type="entry name" value="HISTONEH2A"/>
    </dbReference>
    <dbReference type="SMART" id="SM00414">
        <property type="entry name" value="H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00046">
        <property type="entry name" value="HISTONE_H2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0158">Chromosome</keyword>
    <keyword evidence="6 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 9" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="7 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="11">
        <location>
            <begin position="18"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Histone H2A C-terminal" evidence="12">
        <location>
            <begin position="104"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF16211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW10317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="134" mass="14209" checksum="3F17207DCB1B88BD" modified="2014-02-19" version="1">MSGKGAKGLITGKTSAASKDKDKKKPISRSSRAGLQFPVGRIHRLLKSRTTANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXF6</accession>
    <name>V7AXF6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G085200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GLUTAMINE DUMPER 1 (TC 9.B.60) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXF6"/>
    <dbReference type="STRING" id="3885.V7AXF6"/>
    <dbReference type="Gramene" id="ESW08916">
        <property type="protein sequence ID" value="ESW08916"/>
        <property type="gene ID" value="PHAVU_009G085200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4AK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SYWKISG"/>
    <dbReference type="OrthoDB" id="1930784at2759"/>
    <dbReference type="PhylomeDB" id="V7AXF6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080143">
        <property type="term" value="P:regulation of amino acid export"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040359">
        <property type="entry name" value="GDU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33228">
        <property type="entry name" value="PROTEIN GLUTAMINE DUMPER 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33228:SF49">
        <property type="entry name" value="PROTEIN GLUTAMINE DUMPER 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="36"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="131"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="83"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="151"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="167" mass="18300" checksum="2DFC47E0A4030049" modified="2014-02-19" version="1">MRSIAATIASTSTAPTAATSSLTTPPHPTWHSPVPYLFGGLAAMLGLVAFALLILACSYWKISGGLQIEENGERNIENGGGEKQGDSENKESVRVYEEKILVIMAGDEKPTFLATPKASSVSRPVLNHFEKSLQNHVTSEKSEKEVEIHNQQPQETRQQQQQSQRQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXW7</accession>
    <name>V7AXW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADP-dependent oxidoreductase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G207800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXW7"/>
    <dbReference type="SMR" id="V7AXW7"/>
    <dbReference type="STRING" id="3885.V7AXW7"/>
    <dbReference type="Gramene" id="ESW10419">
        <property type="protein sequence ID" value="ESW10419"/>
        <property type="gene ID" value="PHAVU_009G207800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1577">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHWPASL"/>
    <dbReference type="OrthoDB" id="416253at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044550">
        <property type="term" value="P:secondary metabolite biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd19124">
        <property type="entry name" value="AKR_AKR4A_4B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.100:FF:000014">
        <property type="entry name" value="NAD(P)-linked oxidoreductase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="entry name" value="NADP-dependent oxidoreductase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044497">
        <property type="entry name" value="AKR4A/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NAD(P)_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11732">
        <property type="entry name" value="ALDO/KETO REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="NAD(P)-linked oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00798">
        <property type="entry name" value="ALDOKETO_REDUCTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADP-dependent oxidoreductase" evidence="5">
        <location>
            <begin position="23"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="4">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="35376" checksum="8A09A5D349FE1E20" modified="2014-02-19" version="1">MSASKIPDVVLQSSSSHHKMPVIGFGTASTSSTNDTKEAVLEAIKVGYRHFDTASIYGSEEPLGEAIAEALQLGLIASRDELFITSKLWCTHNFPHLVLPAIHKTLQSLNLEYLDLYLIHWPISVKPGIWEFPYSEEALTSFDLKGVWKAMEECKNLGLTKCIGVSNFSCNKLEKLLSFATIPPSVNQVEMNPTWQQKKLLQYCQAKGIIITAYSPLGAPGAMWGSNNVLDNELLKEIAKTHGKSFAQVSIRWLYELGVTVAVKSYNKERMKQNIEIFDWSLFKDDYEKIAQVQQHQMCKNGPTKFIADLWDGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYN0</accession>
    <name>V7AYN0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Oligosaccharyltransferase complex subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G234400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the OSTC family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYN0"/>
    <dbReference type="SMR" id="V7AYN0"/>
    <dbReference type="STRING" id="3885.V7AYN0"/>
    <dbReference type="Gramene" id="ESW10747">
        <property type="protein sequence ID" value="ESW10747"/>
        <property type="gene ID" value="PHAVU_009G234400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3356">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CWIFMRM"/>
    <dbReference type="OrthoDB" id="10256333at2759"/>
    <dbReference type="PhylomeDB" id="V7AYN0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008250">
        <property type="term" value="C:oligosaccharyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021149">
        <property type="entry name" value="OligosaccharylTrfase_OST3/OST6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042416">
        <property type="entry name" value="OSTC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13160">
        <property type="entry name" value="OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13160:SF4">
        <property type="entry name" value="OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04756">
        <property type="entry name" value="OST3_OST6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="111"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="176" mass="18910" checksum="4DDF593426840AA3" modified="2014-02-19" version="1">MRAKSEPAAQPPSSSSGGASSGASLDPIFHLLRVLPFSFLRPPRLRLKLPSLTLPSPNVVFALLLLTYFMVVSGIVYDIIVEPPGIGSSQDPHTGSVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGMGIILLDLALDRNRAKSVKVSYTSAGVSSIVLAYVMSMLFIRIKIPAYLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ38</accession>
    <name>V7AZ38_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">very-long-chain 3-oxoacyl-CoA synthase</fullName>
            <ecNumber evidence="3">2.3.1.199</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G249200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a very-long-chain acyl-CoA + malonyl-CoA + H(+) = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:32727"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:90725"/>
            <dbReference type="ChEBI" id="CHEBI:90736"/>
            <dbReference type="EC" id="2.3.1.199"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.199" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ38"/>
    <dbReference type="STRING" id="3885.V7AZ38"/>
    <dbReference type="Gramene" id="ESW10917">
        <property type="protein sequence ID" value="ESW10917"/>
        <property type="gene ID" value="PHAVU_009G249200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RGTN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WSTRRIS"/>
    <dbReference type="OrthoDB" id="329835at2759"/>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009922">
        <property type="term" value="F:fatty acid elongase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00831">
        <property type="entry name" value="CHS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012392">
        <property type="entry name" value="3-ktacl-CoA_syn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013601">
        <property type="entry name" value="FAE1_typ3_polyketide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31561">
        <property type="entry name" value="3-KETOACYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08392">
        <property type="entry name" value="FAE1_CUT1_RppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FAE" evidence="7">
        <location>
            <begin position="6"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal" evidence="8">
        <location>
            <begin position="279"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW10917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="387" mass="43442" checksum="1570C22C6F90A626" modified="2014-02-19" version="1">MFEENQLYDGMDPEAVAFQCKIMAKSGFSELTSISPSLAQIPKIKALSFAIEEAETIMCSVIKNLFEKNKINPKTIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDKHKAKYKLQHIVRTITAQDDESHGCVYQQGDPEDKEGVSISKSIVNVSGDALKKNIASLGPLVLPLREQFLYLFSIICRKMWSTRRISIYTPNFNLAFEHFCIHSGGRAIIQAVERNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVCDMKPNTATAWRDTIHLYPVDIMRTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZZ2</accession>
    <name>V7AZZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Gibberellin-regulated protein 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G187400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GASA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZZ2"/>
    <dbReference type="SMR" id="V7AZZ2"/>
    <dbReference type="STRING" id="3885.V7AZZ2"/>
    <dbReference type="Gramene" id="ESW10178">
        <property type="protein sequence ID" value="ESW10178"/>
        <property type="gene ID" value="PHAVU_009G187400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S17T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MANDAAY"/>
    <dbReference type="OrthoDB" id="1886938at2759"/>
    <dbReference type="PhylomeDB" id="V7AZZ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003854">
        <property type="entry name" value="GASA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201">
        <property type="entry name" value="EXTENSIN, PROLINE-RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201:SF108">
        <property type="entry name" value="GIBBERELLIN-REGULATED PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02704">
        <property type="entry name" value="GASA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753771" description="Gibberellin-regulated protein 6" evidence="2">
        <location>
            <begin position="27"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="112" mass="12383" checksum="0F15A2808607AADE" modified="2014-02-19" version="1">MAISKLLCVLLLALLGLSMITTQVMANDAAYHLDRSNNGSGRNYGPGSLRSSQCPSECTRRCSQTQYHKPCMFFCQKCCRSCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1E9</accession>
    <name>V7B1E9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TRF2/HOY1 PH-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G196100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1E9"/>
    <dbReference type="Gramene" id="ESW10286">
        <property type="protein sequence ID" value="ESW10286"/>
        <property type="gene ID" value="PHAVU_009G196100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQND">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECKGMLE"/>
    <dbReference type="OrthoDB" id="1516808at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057939">
        <property type="entry name" value="TRF2_HOY1_PH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33494:SF27">
        <property type="entry name" value="ATP-DEPENDENT DNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33494">
        <property type="entry name" value="OS02G0793800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24818">
        <property type="entry name" value="PH_TRF2_HOY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRF2/HOY1 PH-like" evidence="2">
        <location>
            <begin position="133"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="283"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="465"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="48"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="298"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="342"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="364"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="474"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF24818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="58431" checksum="3318C3712CE723E9" modified="2014-02-19" version="1">MVQLMKNSGKPESISCGDGKNKNHVKLEIVEDPLEEEHGPFNKRHKPSSQQWSASSDASVSSPSNLNILDEPSPLGLRLRKSPSLLDLIQMKLSQGTVQQDENLSPGVKRESRAATAAASAASAAADKLKASNFPALLLRIGSWEYKSRYEGDLVAKCYFAKHKLVWEVLEGGLKSKIEIQWSDIAALKAHCPDDGPSTLTVVLARQPLYFRETNPQPRKHTLWQATADFTDGQSSKHRLHFLQCPQGLLTKHFEKLIQCDMRLNFLSQQPEIILESPHFDQQPAAFEDPDNSKDLDQNQVSGKGSSTSCFQDSGSPVASMSSSFKIEHNDPPGITMDSLPQDASSPSSVMDCSSIEGSTSSETDSKGPRSRDQINLPGLRPSMSVSDFIGQIELCLSEQITSGNPPFSDGGTEYKEILEDIAQHLLNDNQAAATSDEKSLMSRVNSLCCLLQKDPVTVQNSHFAEDSTVEGPDEGKDVKPAEEELRDVSGGKQALGMSRKDSFSDLLLHLPRITSLPKFLFNISEEDGDSHAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1K4</accession>
    <name>V7B1K4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G058500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1K4"/>
    <dbReference type="SMR" id="V7B1K4"/>
    <dbReference type="STRING" id="3885.V7B1K4"/>
    <dbReference type="Gramene" id="ESW11777">
        <property type="protein sequence ID" value="ESW11777"/>
        <property type="gene ID" value="PHAVU_008G058500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TYYHVQS"/>
    <dbReference type="OrthoDB" id="1923658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051863">
        <property type="entry name" value="HIPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811">
        <property type="entry name" value="COPPER TRANSPORT PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811:SF35">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="7">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="63"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="71"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW11777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="174" mass="20090" checksum="8955C364F3E98429" modified="2014-02-19" version="1">MKKFVLKLDLPDDKAKQKALKTVSTLPGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKYWQTDIVSVGPAKEPEKKEEPKKEEAKKEEEKKEEAKKEGEGKKEEEKKEEPKKEEKKEEKKEEEKKDEEKKKEAPPPPPDPVLELVKAYRAYNPHMTTYYYVQSMEENPNACAIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2B1</accession>
    <name>V7B2B1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">O-methyltransferase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G2586001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2B1"/>
    <dbReference type="STRING" id="3885.V7B2B1"/>
    <dbReference type="Gramene" id="ESW11018">
        <property type="protein sequence ID" value="ESW11018"/>
        <property type="gene ID" value="PHAVU_009G2586001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3178">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LQCEIIC"/>
    <dbReference type="OrthoDB" id="1606438at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008171">
        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000061">
        <property type="entry name" value="Caffeic acid O-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016461">
        <property type="entry name" value="COMT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001077">
        <property type="entry name" value="COMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11746">
        <property type="entry name" value="O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00891">
        <property type="entry name" value="Methyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51683">
        <property type="entry name" value="SAM_OMT_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="O-methyltransferase C-terminal" evidence="4">
        <location>
            <begin position="71"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="294" mass="32624" checksum="A12D4ED8AACDDA21" modified="2014-02-19" version="1" fragment="single">GKITRFSQQDRLLTLLVTHSLLSCSITQQEPHPQRFYTLSPASRYFVTDPQGASLGSSIKLLLDQIFYKSWGELKGSILEGGVAFDRAHGMNAFEYPRVDPRFNEVFNNGMTGLTTVITKRILELYNGFEHVTRLVDVGGGHGVNLKLITSKYPHIQAINFDLPHVVENAPLLSGVEHVGGDMFESVPSGDAIFMKWVLHDWSDEQCVKLLKNCYKGIPDDGKVIVVDSIVSTVAETSLAAKSALGYDLIMMTQNPGGKERTRQEIIELAEASGFSGVRFICCVCGNWVMEFYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2M7</accession>
    <name>V7B2M7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G229900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 17">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2M7"/>
    <dbReference type="SMR" id="V7B2M7"/>
    <dbReference type="STRING" id="3885.V7B2M7"/>
    <dbReference type="Gramene" id="ESW10689">
        <property type="protein sequence ID" value="ESW10689"/>
        <property type="gene ID" value="PHAVU_009G229900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10690">
        <property type="protein sequence ID" value="ESW10690"/>
        <property type="gene ID" value="PHAVU_009G229900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10691">
        <property type="protein sequence ID" value="ESW10691"/>
        <property type="gene ID" value="PHAVU_009G229900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000025">
        <property type="entry name" value="Protein phosphatase 2C 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000222">
        <property type="entry name" value="PP2C_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01032">
        <property type="entry name" value="PPM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0938">Abscisic acid signaling pathway</keyword>
    <keyword evidence="7 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 13" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="14">
        <location>
            <begin position="222"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW10691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="537" mass="59028" checksum="A04E0EF8FE2968F3" modified="2014-02-19" version="1">MEEITSTVAVPFALGNLIQKDPSVTTHMEITGLKLRANTAPVLILNPAMERENHTDIGPQPQNKVSSEAKDNQVGADFVSEMVSQGDNNCFHAENQKQARKENQSLLAKDFQCEHISQSAAGDKSSPCNEESSVSRANCCEISSPITIKVDDNTIHGRAGSTEPPGAAIEPLQNMVSVARGQESEDGSGSDESDKKPFDVVHEMPEKATCLELSVATSTTPLWGCSSVCGRREEMEDAIAVRPHLFQVTSMMVMDDYVSENSKFSPAHFFGVYDGHGGCQVANYCREHLHSVLVDEIKAAQSSLEEQNGRENWEDQWKKAFSNCFHKVDDEVGGVGEDNGASVEPLASEAVGSTAVVALLTQTHIIVANCGDSRAVLCRGKEAIPMSDDHKPNREDEWERIEASGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCVQRDKNDEFLVLASDGLWDVMTNEEACDFARRRILLWHKKNGNNSSSQQGQGPDPAAQYAAEYLSRLALQRGSKDNISVIVIDLKPQRKFKKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3F8</accession>
    <name>V7B3F8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Legume lectin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G111500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the leguminous lectin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3F8"/>
    <dbReference type="SMR" id="V7B3F8"/>
    <dbReference type="STRING" id="3885.V7B3F8"/>
    <dbReference type="Gramene" id="ESW12427">
        <property type="protein sequence ID" value="ESW12427"/>
        <property type="gene ID" value="PHAVU_008G111500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTUJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WKGGEVM"/>
    <dbReference type="OrthoDB" id="2019747at2759"/>
    <dbReference type="PhylomeDB" id="V7B3F8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001220">
        <property type="entry name" value="Legume_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050258">
        <property type="entry name" value="Leguminous_Lectin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32401">
        <property type="entry name" value="CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32401:SF16">
        <property type="entry name" value="CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00139">
        <property type="entry name" value="Lectin_legB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0430">Lectin</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754048" description="Legume lectin domain-containing protein" evidence="4">
        <location>
            <begin position="30"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="295"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Legume lectin" evidence="5">
        <location>
            <begin position="35"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW12427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39360" checksum="87A90BFB216EC3AA" modified="2014-02-19" version="1">MPTSIMAPFFIFHHFTVFTFLIFFLKAQAFDPLSSFSFADFEKDPKFKSSVELYGNAKVMNGGAGVLLSGNSGRIMYKKPIKLVQGGARELVSFSTYVGFSMSLDSGKGSLAFVMVPSGVEGEVFGNSSYGFSFGLKKKEFKVVGVQFSVDGKNGSSGSCVVSINVGSSVPVKTINVSSVIMGLKREGKLHAWIDYQASSKRLEVRLNHYGQSRPSDPLLWHSIDLSNVWGTEEMFAGFSTLKQNTSQASFLYSWSFIVRHFPHWMHSEPLDPKVLSKNTETPAVKSRSDCLLRVLAAMIFGAGCGALTAFIVLYLWTIFGNKRPVVPEEYAMQPVDFEYKKVNIVVDKTIKDAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4A2</accession>
    <name>V7B4A2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Sodium/metabolite cotransporter BASS3, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G136700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast envelope</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4A2"/>
    <dbReference type="SMR" id="V7B4A2"/>
    <dbReference type="STRING" id="3885.V7B4A2"/>
    <dbReference type="Gramene" id="ESW12722">
        <property type="protein sequence ID" value="ESW12722"/>
        <property type="gene ID" value="PHAVU_008G136700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2718">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NIMMETT"/>
    <dbReference type="OrthoDB" id="203097at2759"/>
    <dbReference type="PhylomeDB" id="V7B4A2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009941">
        <property type="term" value="C:chloroplast envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004710">
        <property type="entry name" value="Bilac:Na_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361">
        <property type="entry name" value="SODIUM-BILE ACID COTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361:SF33">
        <property type="entry name" value="SODIUM_METABOLITE COTRANSPORTER BASS3, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="205"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="245"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="275"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="305"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="371"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="408" mass="43171" checksum="5B6D1CEF9497AB05" modified="2014-02-19" version="1">MALIPISCSPNLRLSPFQPPSRSLACLSKLTVQRGGAASSFACSTSHFRGRIGFHFLRRQPGKLSSLSFGADNRNAVGEVRERDLSQLLSALLPVVVAATAVAALVQPSTFTWVSKDLYAPALGGIMLSIGIRLSADDFALAFKRPLPLTLGLIAQYVLKPVLGVFIAKAFGLSRMFYAGFVLTACVSGAQLSSYANFLSKGDVALGILLTSYTTIASVVVTPLLTGLLIGSVVSVDAVAMSKSILQVVLIPVTLGLILNTYAKPVVSVLQPVMPFVAMICTSLCIGSPLALNRSQILSVEGLRLVFPVLTFHIVAFSLGYWFSKIPSLRQEEHVSRTLSLCSGMQSSTLAGLLATQFLDSSQAVPPACSVIAMAIMGLCLASFWGSGFAIRNLLPFAPQRTNSALKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6A8</accession>
    <name>V7B6A8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Autophagy-related protein 13 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G187800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6A8"/>
    <dbReference type="SMR" id="V7B6A8"/>
    <dbReference type="STRING" id="3885.V7B6A8"/>
    <dbReference type="Gramene" id="ESW13339">
        <property type="protein sequence ID" value="ESW13339"/>
        <property type="gene ID" value="PHAVU_008G187800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4573">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HSWTSGI"/>
    <dbReference type="OrthoDB" id="70161at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990316">
        <property type="term" value="C:Atg1/ULK1 kinase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000407">
        <property type="term" value="C:phagophore assembly site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000423">
        <property type="term" value="P:mitophagy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034727">
        <property type="term" value="P:piecemeal microautophagy of the nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034497">
        <property type="term" value="P:protein localization to phagophore assembly site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.900.10:FF:000007">
        <property type="entry name" value="Autophagy-related protein 13a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.900.10">
        <property type="entry name" value="HORMA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040182">
        <property type="entry name" value="ATG13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018731">
        <property type="entry name" value="Atg13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036570">
        <property type="entry name" value="HORMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13430:SF4">
        <property type="entry name" value="AUTOPHAGY-RELATED PROTEIN 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10033">
        <property type="entry name" value="ATG13"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0072">Autophagy</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Autophagy-related protein 13 N-terminal" evidence="3">
        <location>
            <begin position="18"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Autophagy-related protein 13 N-terminal" evidence="3">
        <location>
            <begin position="96"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="334"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="378"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="430"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="593" mass="65754" checksum="0CA07B6D028A34DE" modified="2014-02-19" version="1">MDLQNNMQPELGKLEQIVYQFLLKCLHIILDSRVPLLRPHDRSGDLSMGSRVRRSDKWFNLALGDRPSALDNLNFWHRNLMDPMIIDIILVHDVAGSSVETVIERWVVQYDCPRVVAPQTGDITSSYKKTYQKSIVLFRALYSQMRLLPAQKIFRQLSTCSHSCNFDIVYKVSSFSDPFSRAEGGMMEEHNFTPIEALPGRLCVSVTFRTALSEFSLECSASLPTKIITDYVGSPNTDPLRSFPVSDKGVRPTSFPLRGIAPPSSSPLDRPHSWTSGFHRAAPFVLNHPYVGSPPVYRGSSKPYDYPSPPIDNYGIRLPNHRILNQQRSTSYDEYQLSPPFSSSPSPSPPTYLCPINPMQTHMRPGTAPVTIPHSVIGKSTSNLSSNFSDPSRNSLPPLSPRRNDGSSHESPSGIKSLRKLEASRTGQKFVRDSKDDSGRFSGLLSSSGSPRIGFSRTSSRLSFQDELDDGDFSCPFDVDDVDAPDVQYSQNVDGKSGAEMTSTSMPIGKKSQDAAVGVLVHMLRTAPPLRQDPSCYSSHSPKAEFDGGVATASGFFMPRKTADALEELRGYREMRDLLLSKSGTRILNKHKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAM9</accession>
    <name>V7BAM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">glutamine synthetase</fullName>
            <ecNumber evidence="4">6.3.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Glutamate--ammonia ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G237500g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-glutamate + NH4(+) + ATP = L-glutamine + ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16169"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homooctamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12 13">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.2" evidence="4"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAM9"/>
    <dbReference type="SMR" id="V7BAM9"/>
    <dbReference type="STRING" id="3885.V7BAM9"/>
    <dbReference type="Gramene" id="ESW13918">
        <property type="protein sequence ID" value="ESW13918"/>
        <property type="gene ID" value="PHAVU_008G237500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0683">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QIMYVWI"/>
    <dbReference type="OrthoDB" id="1936100at2759"/>
    <dbReference type="PhylomeDB" id="V7BAM9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamine synthetase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.590.10:FF:000004">
        <property type="entry name" value="Glutamine synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.70:FF:000003">
        <property type="entry name" value="Glutamine synthetase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="entry name" value="Glutamine synthetase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.590.10">
        <property type="entry name" value="Glutamine synthetase/guanido kinase, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008147">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027302">
        <property type="entry name" value="Gln_synth_N_conserv_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050292">
        <property type="entry name" value="Glutamine_Synthetase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20852">
        <property type="entry name" value="GLUTAMINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20852:SF93">
        <property type="entry name" value="GLUTAMINE SYNTHETASE CYTOSOLIC ISOZYME 1-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="Glutamine synthetase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="Glutamine synthetase/guanido kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00180">
        <property type="entry name" value="GLNA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51986">
        <property type="entry name" value="GS_BETA_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51987">
        <property type="entry name" value="GS_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GS beta-grasp" evidence="14">
        <location>
            <begin position="19"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="domain" description="GS catalytic" evidence="15">
        <location>
            <begin position="106"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW13918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39403" checksum="F550A26F8240C70F" modified="2014-02-19" version="1">MSLLSDLINLNLSNTTEKVIAEYIWVGGSGMDMRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGADSEVLLYPQAIFKDPFRRGKNILVMCDTYTAAGEPIPTNKRYNAAKIFNHPDVLAEEPWYGIEQEYTLLQKDVKWPLGWPIGGFPGPQGPYYCGIGADKAFGRDIVNSHFEACLYAGINITGINGEVMPAQWEFQIGPSAGISACDDLWVARYILERITEIAGVVLSFDPRPIKGDWNCAGAHTNFSTKSMRNDGGYEVIKKAITKLEKRHKEHIAAYGEGNERRLTGKHETADINTFIWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAZ8</accession>
    <name>V7BAZ8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G035600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAZ8"/>
    <dbReference type="SMR" id="V7BAZ8"/>
    <dbReference type="Gramene" id="ESW14999">
        <property type="protein sequence ID" value="ESW14999"/>
        <property type="gene ID" value="PHAVU_007G035600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S9I7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KKLERCY"/>
    <dbReference type="OrthoDB" id="1667576at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38225">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38225:SF3">
        <property type="entry name" value="RX N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="13510" checksum="AB1FBA7F795712C0" modified="2014-02-19" version="1">MTYSLSSFCTLNHSFSCHKPTKYPKITCQTFSDNEKRANIVDSNLRILRERIEQVQKRELIHRVGWNYKHGYEHNYKKDTMMSQSAEIIGLACSAIGLVFLVGSLSIFLLSLFLMCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBJ7</accession>
    <name>V7BBJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">Lipoxygenase</fullName>
            <ecNumber evidence="18">1.13.11.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_007G055800g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>(9Z,12Z)-octadecadienoate + O2 = (13S)-hydroperoxy-(9Z,11E)-octadecadienoate</text>
            <dbReference type="Rhea" id="RHEA:22780"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:30245"/>
            <dbReference type="ChEBI" id="CHEBI:57466"/>
            <dbReference type="EC" id="1.13.11.12"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>(9Z,12Z,15Z)-octadecatrienoate + O2 = (13S)-hydroperoxy-(9Z,11E,15Z)-octadecatrienoate</text>
            <dbReference type="Rhea" id="RHEA:34495"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:32387"/>
            <dbReference type="ChEBI" id="CHEBI:58757"/>
            <dbReference type="EC" id="1.13.11.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 17">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="18">Lipid metabolism; oxylipin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 17">Belongs to the lipoxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.-" evidence="18"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBJ7"/>
    <dbReference type="SMR" id="V7BBJ7"/>
    <dbReference type="STRING" id="3885.V7BBJ7"/>
    <dbReference type="Gramene" id="ESW15232">
        <property type="protein sequence ID" value="ESW15232"/>
        <property type="gene ID" value="PHAVU_007G055800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVKD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TESWVWQ"/>
    <dbReference type="OrthoDB" id="407298at2759"/>
    <dbReference type="UniPathway" id="UPA00382"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016165">
        <property type="term" value="F:linoleate 13S-lipoxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034440">
        <property type="term" value="P:lipid oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031408">
        <property type="term" value="P:oxylipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01751">
        <property type="entry name" value="PLAT_LH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.245.10:FF:000002">
        <property type="entry name" value="Lipoxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.450.60:FF:000002">
        <property type="entry name" value="Lipoxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.372.10:FF:000001">
        <property type="entry name" value="Lipoxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.375.10:FF:000001">
        <property type="entry name" value="Lipoxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.375.10">
        <property type="entry name" value="Lipoxygenase-1, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.372.10">
        <property type="entry name" value="Lipoxygenase-1, Domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.245.10">
        <property type="entry name" value="Lipoxygenase-1, Domain 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.60.20">
        <property type="entry name" value="PLAT/LH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000907">
        <property type="entry name" value="LipOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013819">
        <property type="entry name" value="LipOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036226">
        <property type="entry name" value="LipOase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020834">
        <property type="entry name" value="LipOase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020833">
        <property type="entry name" value="LipOase_Fe_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001246">
        <property type="entry name" value="LipOase_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042057">
        <property type="entry name" value="Lipoxy_PLAT/LH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027433">
        <property type="entry name" value="Lipoxygenase_dom_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001024">
        <property type="entry name" value="PLAT/LH2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036392">
        <property type="entry name" value="PLAT/LH2_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11771">
        <property type="entry name" value="LIPOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00305">
        <property type="entry name" value="Lipoxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01477">
        <property type="entry name" value="PLAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00087">
        <property type="entry name" value="LIPOXYGENASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00468">
        <property type="entry name" value="PLTLPOXGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00308">
        <property type="entry name" value="LH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49723">
        <property type="entry name" value="Lipase/lipooxygenase domain (PLAT/LH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48484">
        <property type="entry name" value="Lipoxigenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00711">
        <property type="entry name" value="LIPOXYGENASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00081">
        <property type="entry name" value="LIPOXYGENASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51393">
        <property type="entry name" value="LIPOXYGENASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50095">
        <property type="entry name" value="PLAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 17" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="13 18" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="11 17" id="KW-0408">Iron</keyword>
    <keyword evidence="5 18" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 17" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 18" id="KW-0925">Oxylipin biosynthesis</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PLAT" evidence="20">
        <location>
            <begin position="26"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoxygenase" evidence="21">
        <location>
            <begin position="153"/>
            <end position="856"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="19">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="19">
        <location>
            <begin position="221"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00051140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00052046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU003974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU003975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS51393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW15232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="856" mass="97762" checksum="B9549078B2CF8C0A" modified="2014-02-19" version="1">MEVKQKLGRRREVRGRVIVMKKGFLDFHDIKANVLDRVHELLGRGVSLQLISANSPNPGPIGEVAYLEKWVSTISSLTTPATHVEFSITFEWDESMGVPGAFIIKNHHHSQFYLKTLDIEHIPGHGPVKFLCNSWIYPVHRYANDRVFFANKAYLPCQTPEPLRRFREQELIVLRGKGFGRLKEWDRVYDYAYYNDLGSPDNGPNNARPVLGGGSEFPYPRRGRTGRRHTKTDAKTESRLHILCVKKVYVPRDEQFGHVKFSDFLAYAVKSVSQVLLPGITSLCDKTPNEFDTFKDVLNIYKGCIKLPSGPAAKKLRELVPFEVMRELIRNDGERFLKFPMPDVIKESKSAWRTDEEFAREMLAGVNPVIIQRLQEFPPVSKLDPKVYGDQASSIRAIHIENSLDGFTINEAIQEMRLFILDHHDALMPYISRINSTNTKTYASRTLLFLQDDGTLKPLAIELSLPHPQGNQHGAVSKVIVPAKEGIAASVWQLAKAYVAVNDSGYHQLVSHWLHSHAVIEPFIIATHRQLSILHPIHKLLKPHFKDTMHINALARHTLINAGGVLEKTVFPGKFSMEMSAVIYKSWVFPEQALPADLLKRGMAVPNSSYRHGLKLVIEDYPFAVDGLEIWEAIETWVTEYCNFYYTSNEMVEEDYELQNWWNEVRNEGHGDLKDRPWWSEMKCREELIQSCTIIIWLASAFHAAVNFGQYPYAGYLPNRPTVSRRFMPESGTPEYEEIKSNPELAFLKTITAQLQTLLGVSLIEILSRHSTEEVYLGQSENTEWTLDDEPLKAFARFSEKLLEIENNIMERNKDKRLKNRSGPVKMPYTLLYPNTSDYSKEGGLTGKGIPNSISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCX7</accession>
    <name>V7BCX7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G091100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCX7"/>
    <dbReference type="STRING" id="3885.V7BCX7"/>
    <dbReference type="Gramene" id="ESW15659">
        <property type="protein sequence ID" value="ESW15659"/>
        <property type="gene ID" value="PHAVU_007G091100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1838">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QREEPYA"/>
    <dbReference type="OrthoDB" id="247542at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047372">
        <property type="term" value="F:monoacylglycerol lipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034338">
        <property type="term" value="F:short-chain carboxylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000071">
        <property type="entry name" value="Embryogenesis-associated protein EMB8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050960">
        <property type="entry name" value="AB_hydrolase_4_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012020">
        <property type="entry name" value="ABHD4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10794">
        <property type="entry name" value="ABHYDROLASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10794:SF63">
        <property type="entry name" value="ALPHA_BETA HYDROLASE 1, ISOFORM A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005211">
        <property type="entry name" value="Ab_hydro_YheT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="AB hydrolase-1" evidence="4">
        <location>
            <begin position="153"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="359"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="2">
        <location>
            <position position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR005211-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW15659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="465" mass="52180" checksum="FEF68D2465CA7CE7" modified="2014-02-19" version="1">MMDESYCIPDSASSSDAYWLLLQVLSLIPLWHYLLLAAFLLLSVLYNFLQLHFFQDLFSGFPGSPVLLSYNTSSQIYHAVVSQCEVLRSRYFATPWLCSPNLQTLFLNYFGRPPLVKYARELFRTADGGTIALDWVFSSHVSDDVASEDESIPIVVVIPGLTSDSSSQYIKHLAYHTAKRGWNVVVCNHRGFGGVSITSDISYNAGWTEDVRAVVNYLHKERSKAPLFVVGTSIGANILVKYLGEDGENIPVAGAVAVCSPWDLLIEDRYLRRGRVQKIYDKALAFALQDYAKLHQSHFSRNANWEGIEKSLSVRDFDDHATRVVAKYESVDTFYRRCSSSTYVQSVSVPLLCINALDDPICTTEAIPWDECKANKNIVLATLKHGGHLAFFEGLTASHIWWVRAVNEFLGVLHSSKYMHVHEKDFSTKNSIGLVNSSSLNANVTEDGMLTAPNNDPKTMWKKHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDH5</accession>
    <name>V7BDH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G0327000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PA-phosphatase related phosphoesterase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDH5"/>
    <dbReference type="STRING" id="3885.V7BDH5"/>
    <dbReference type="Gramene" id="ESW14963">
        <property type="protein sequence ID" value="ESW14963"/>
        <property type="gene ID" value="PHAVU_007G0327000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3030">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WYHAPAG"/>
    <dbReference type="OrthoDB" id="10030083at2759"/>
    <dbReference type="PhylomeDB" id="V7BDH5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008195">
        <property type="term" value="F:phosphatidate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046839">
        <property type="term" value="P:phospholipid dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006644">
        <property type="term" value="P:phospholipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03390">
        <property type="entry name" value="PAP2_containing_1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.144.10:FF:000001">
        <property type="entry name" value="Lipid phosphate phosphatase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.144.10">
        <property type="entry name" value="Phosphatidic acid phosphatase type 2/haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043216">
        <property type="entry name" value="PAP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="PAP2/HPO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="PAP2/HPO_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10165">
        <property type="entry name" value="LIPID PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10165:SF35">
        <property type="entry name" value="RE23632P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="Acid phosphatase/Vanadium-dependent haloperoxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="167"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="Phosphatidic acid phosphatase type 2/haloperoxidase" evidence="9">
        <location>
            <begin position="98"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="301"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW14963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="36386" checksum="D19EB5F9DB94F81A" modified="2014-02-19" version="1">MPEIQLGTHTIRSHGTRVARIHMHDWLILLLLVIIDAVLNIIEPFHRFVGEGMMTDLRYPLKDNTIPFWAVPIVAILLPLAVFLVYYFIRKDVYDFHHAILGLLFSVLITAVITDAVKDGVGRPRPDFFWRCFPDGKGVFDPVTSNVQCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKIRVFDRRGHVAKLCLIFLPILVAAMIAVSRVDDYWHHWQDVFAGSLIGTIIASFCYLQFYPPPYDLDGWGPHAYFQMLSESRNGAQPSTVNNEIHHAQSAELQAVSLYIPPQNDADTRGNSWDSSPMLRGSQNVRAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDS5</accession>
    <name>V7BDS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ammonium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G120200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDS5"/>
    <dbReference type="SMR" id="V7BDS5"/>
    <dbReference type="STRING" id="3885.V7BDS5"/>
    <dbReference type="Gramene" id="ESW15989">
        <property type="protein sequence ID" value="ESW15989"/>
        <property type="gene ID" value="PHAVU_007G120200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0682">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAGSDVM"/>
    <dbReference type="OrthoDB" id="534912at2759"/>
    <dbReference type="PhylomeDB" id="V7BDS5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097272">
        <property type="term" value="P:ammonium homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015843">
        <property type="term" value="P:methylammonium transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3430.10:FF:000006">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="entry name" value="Ammonium transporter AmtB like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00836">
        <property type="entry name" value="amt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11730">
        <property type="entry name" value="AMMONIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11730:SF6">
        <property type="entry name" value="AMMONIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111352">
        <property type="entry name" value="Ammonium transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="128"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="195"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="240"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="337"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="413"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium transporter AmtB-like" evidence="9">
        <location>
            <begin position="45"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW15989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="510" mass="54461" checksum="CA9D020B4F38BBAB" modified="2014-02-19" version="1">MASLSCSSDLATLINQTAAAHYLCNQFDSISRKLNDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRDYPIPTADYSFFLYQWAFAIAVAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASATRSDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSSSLVVLGSFLLWFGWYGFNPGSFFTIAKGYGGASYKGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIALNKLAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPFGALMNGGGKLLAAQLIEIVVVCGWVTATMGPLFYGLHKMNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGLMMRKIEPASTSPSPPAAPHLSLHPLSISSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFQ9</accession>
    <name>V7BFQ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GTD-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G178800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFQ9"/>
    <dbReference type="SMR" id="V7BFQ9"/>
    <dbReference type="STRING" id="3885.V7BFQ9"/>
    <dbReference type="Gramene" id="ESW16705">
        <property type="protein sequence ID" value="ESW16705"/>
        <property type="gene ID" value="PHAVU_007G178800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16707">
        <property type="protein sequence ID" value="ESW16707"/>
        <property type="gene ID" value="PHAVU_007G178800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16709">
        <property type="protein sequence ID" value="ESW16709"/>
        <property type="gene ID" value="PHAVU_007G178800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPSJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1047602at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080115">
        <property type="term" value="F:myosin XI tail binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007656">
        <property type="entry name" value="GTD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039306">
        <property type="entry name" value="MYOB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31448">
        <property type="entry name" value="MYOSIN-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31448:SF39">
        <property type="entry name" value="MYOSIN-BINDING PROTEIN 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04576">
        <property type="entry name" value="Zein-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51775">
        <property type="entry name" value="GTD_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="GTD-binding" evidence="7">
        <location>
            <begin position="556"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="282"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="395"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="445"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="746"/>
            <end position="812"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="572"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="822"/>
            <end position="856"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="285"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="447"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="493"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="511"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="521"/>
            <end position="537"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="754"/>
            <end position="763"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="765"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="778"/>
            <end position="788"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW16709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="875" mass="96956" checksum="2D66DE8E1852A37D" modified="2014-02-19" version="1">MASSGKGTSFVKAKRMKGFISHLSSAASEWFLLFLLLLDALLSYMLTKFASYCRLQLPCLLCSRLDHILGCESPELYENLFCSNHKSEISSLILCHVHGKLANGHKMCDDCLLSVTAKTKSKSHRLLVGKFGLVLGDAGFKSPSLSRDLFAGSKGARLCTIQCTCCGKLWKSDQNSPRSIQLKSPGRTALKPYIPLPCAPRQSRLNHRDNMRKMRDKFCGLEGKNSFQPLSHVGYCELRLTSDSENEFPFSDDDDFSTSSVFQENIEASNDPMSQITLPPPTKCIPSNSNPENLSGSSAKPMPLSSAQCVEPNVSKHQDVNANSAVEINLQQTNQESFSSELAELISLDEVSSSPIVLNVPNRESEPEDSKITFPSQDSLPAPLSELMTLNGRNAHAGASSKKSADVAQASDTGMVSEKNGEVLEKIGTEEKISTETGPVVCDAAPTNPSQENSSNMNKFSVVTKEREETDFVTKQPTTEEVDTIKEEVEQSPLDNSSPNGSNLSSTFPVDHVDSPETHTEASSPNGVQVLQKSPSVESGLESLDDSNIAEIEGECYADKLRRHIDYYRKCLDSLLKELEEERNASAVATNEAMSMITRLQEEKAALQMEALQYLRMMEEQAEYDNDELEKVGDMLTEKEKEVQDLEAELEFYRSNMPGVEDMVHDMHKESQDLKGEKTTTQNTGVPNIIRKFSSSKNVEVSRVGDEAMTGGTFILEFEEEKEYISQCLKNLEQKVHEIYLHAPNDRPEKLEASSKSNQQGASNGEEHQLDGHEETDLSTQKNINMLNGNHIDKDGSAASDDCSLSVENKPTVSTPRRELELVVLENEISDLNDRLEALELNHELLEHLTNSLNSNDGKLFIQDIAHRLHELRKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGQ2</accession>
    <name>V7BGQ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G207100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGQ2"/>
    <dbReference type="STRING" id="3885.V7BGQ2"/>
    <dbReference type="Gramene" id="ESW17064">
        <property type="protein sequence ID" value="ESW17064"/>
        <property type="gene ID" value="PHAVU_007G207100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2641">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIKLIVM"/>
    <dbReference type="OrthoDB" id="5348404at2759"/>
    <dbReference type="PhylomeDB" id="V7BGQ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005178">
        <property type="entry name" value="Ostalpha/TMEM184C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23423">
        <property type="entry name" value="ORGANIC SOLUTE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03619">
        <property type="entry name" value="Solute_trans_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01417">
        <property type="entry name" value="Solute_trans_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="173"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="239"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="343"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="352"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46754" checksum="76023E8236DA9699" modified="2014-02-19" version="1">MVPILLYIVAFLCTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPDGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGAVVLSLSGRILKPSWFLMTCCLPPVALDGRFIRKCKQGCLQFVILKPILVVVTLVLYAKGKYKDGNFSPKQSYLYLTIFYTFSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSEYVKDADEAALLQDFIICVEMLVAAVGHFYAFPYKVYAGANIGGSRGLSASLAHALKLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGPRKYRSRTFVPIGPEMDTVRRNKHLFGNKPDDIQLSSFSSNSSSASNSGLNSEVSHTGGVKSSLLVDVSNSLSVPYDMTLIDLDASSYPEKVPAADKAGTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHE3</accession>
    <name>V7BHE3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G229500g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Secreted</location>
            <location evidence="1 13">Extracellular space</location>
            <location evidence="1 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHE3"/>
    <dbReference type="SMR" id="V7BHE3"/>
    <dbReference type="Gramene" id="ESW17319">
        <property type="protein sequence ID" value="ESW17319"/>
        <property type="gene ID" value="PHAVU_007G229500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RDTK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AINPPHF"/>
    <dbReference type="OrthoDB" id="1921208at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010497">
        <property type="term" value="P:plasmodesmata-mediated intercellular transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000280">
        <property type="term" value="P:regulation of root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02241">
        <property type="entry name" value="cupin_OxOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000025">
        <property type="entry name" value="germin-like protein subfamily 2 member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019780">
        <property type="entry name" value="Germin_Mn-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00725">
        <property type="entry name" value="GERMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="7 12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 10 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019620393" description="Germin-like protein" evidence="13">
        <location>
            <begin position="24"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="14">
        <location>
            <begin position="67"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="12">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="225" mass="24302" checksum="07CC609D05E2668D" modified="2014-02-19" version="1">MCSENTLWLLLAVFSFCVAISLASDPDPVQDFCIPNPRFGDIKTAHANHYILPCKNSSEATTEDFVFSCLKATGVFSDTGLAVVLASPANFPGLNTLGLSFARADIEVGGINPPHFHPRATELVHVVQGKVYLGFVDSSNRVFARVLEKGEVMVLPKGLVHFMMNVGDEPATLFGSFNSQNPGIQKIPSAVFGSGIDEELLQKAFGLSSKQIGTLRKKFDPKTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHE4</accession>
    <name>V7BHE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Myb/SANT-like DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G224600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHE4"/>
    <dbReference type="SMR" id="V7BHE4"/>
    <dbReference type="STRING" id="3885.V7BHE4"/>
    <dbReference type="Gramene" id="ESW17262">
        <property type="protein sequence ID" value="ESW17262"/>
        <property type="gene ID" value="PHAVU_007G224600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT79">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSCGHNG"/>
    <dbReference type="OrthoDB" id="1727874at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46327">
        <property type="entry name" value="F16F4.11 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46327:SF2">
        <property type="entry name" value="SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb/SANT-like DNA-binding" evidence="3">
        <location>
            <begin position="102"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="24"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="234"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="296"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="423"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="26"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="72"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="248"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="299"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="473" mass="54550" checksum="9BEF240EAA80F190" modified="2014-02-19" version="1">MLFPLFNYSIKGAGMFSGMVGVDNSLQPQQQQNPHHLQHHPQMVPYAPHHDTDPHHPHHNQSIKQGYPPYSSAKTKQQQHSGLSDEDDDTSDPKKKVSLWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDKKKSLGMLQKKGKWKSVSRAMMEKGSYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLETMELSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHVNNNPPQQGETGGDVPQSQAQLHQQQPQQQQPQQQQQQQPCFHSSEVENLGASGVEGLRMLKVGNGEENDDDSDEEEDSEDDSDEEEDDSGEGGSRGNVGHGHENMEDDNDGRSMRKRARKVREVPVSPLMMQQLSAEVSGVFQDGGRSAWDKKQWMRSRILQLEEQQISYQSQSFELEKQRLKWARFSSKKEREMKRAKLENERRRLENERMVLLIRQKEFELMSLQHQQKHQQQQHSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHH0</accession>
    <name>V7BHH0_PHAVU</name>
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        <recommendedName>
            <fullName evidence="3">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G113200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHH0"/>
    <dbReference type="STRING" id="3885.V7BHH0"/>
    <dbReference type="Gramene" id="ESW15911">
        <property type="protein sequence ID" value="ESW15911"/>
        <property type="gene ID" value="PHAVU_007G113200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQIK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAIANHS"/>
    <dbReference type="OrthoDB" id="26838at2759"/>
    <dbReference type="PhylomeDB" id="V7BHH0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045735">
        <property type="entry name" value="Spore_III_AA_AAA+_ATPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20953:SF13">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20953">
        <property type="entry name" value="KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19568">
        <property type="entry name" value="Spore_III_AA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="3">
        <location>
            <begin position="171"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="42811" checksum="150E0266C7CD8868" modified="2014-02-19" version="1">MVVTSCWCSSSWLPMSLPLPWNLKAATTALSLKMKCEAFSEGSCCLVHNDQDDMQALLQILPSDLHPSLLDQSNRSQLLEVVLDLGRLPEARYLGNHGGHCLRNTEVTVKELEYAEQAVGEFGKDNRAGIEGTLHRISAIRSRKGHIVGLTCRVGRAITGQIDMVYDLLQYGKSILFVGRPGVGKTTVMREIARVLSEELHKRVVVVDTSNEIGGDGNVPHAAIGGARRMQVREPSMQHRVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIILIGTAHGQKLENIIKNPTLSDLIGGIETVTLGDAEARARNCPKTVLERKAPPTFDFLIEMRDRHYWLTHKTDKSVDMLLRGKSPQVEVRKKDEKCKTVIEKSKAYDKCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIG2</accession>
    <name>V7BIG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G181900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIG2"/>
    <dbReference type="SMR" id="V7BIG2"/>
    <dbReference type="STRING" id="3885.V7BIG2"/>
    <dbReference type="Gramene" id="ESW16748">
        <property type="protein sequence ID" value="ESW16748"/>
        <property type="gene ID" value="PHAVU_007G181900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQRC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YNCTFLA"/>
    <dbReference type="OrthoDB" id="684567at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11448">
        <property type="entry name" value="bHLH_AtFAMA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11969:SF54">
        <property type="entry name" value="MAD-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11969">
        <property type="entry name" value="MAX DIMERIZATION, MAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="136"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="100"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="100"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="119"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW16748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="337" mass="37618" checksum="DC325D14F06A6830" modified="2014-02-19" version="1">MCLPEGERDRERAMALEAVVFPQSQDPFGSVKDFYNCTFLAATSPNWGDCEHININIDKEEEQGSISTFLENNTNQPNNYPYGGDWTSSSSSILPHLNELQETTDPSSSTQNLDSLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGSQKEGEGKSDAGGATNMPFSEFFAFPQYSTSGGGGSDNSATIGEDVAEVKYGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTAEVVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEAVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJR1</accession>
    <name>V7BJR1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G023600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJR1"/>
    <dbReference type="Gramene" id="ESW18229">
        <property type="protein sequence ID" value="ESW18229"/>
        <property type="gene ID" value="PHAVU_006G023600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="81" mass="9416" checksum="F35D717D56B4097A" modified="2014-02-19" version="1">MLEAAPWKEGRNMWTMKRNLKERGFHSTFDDVSYIVFNLNLLPHFPCCSPSLPLSPRATAFTLRPCDDNLKAPDLYRFVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK72</accession>
    <name>V7BK72_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">K-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G034300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK72"/>
    <dbReference type="SMR" id="V7BK72"/>
    <dbReference type="STRING" id="3885.V7BK72"/>
    <dbReference type="Gramene" id="ESW18357">
        <property type="protein sequence ID" value="ESW18357"/>
        <property type="gene ID" value="PHAVU_006G034300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLAQHEM"/>
    <dbReference type="OrthoDB" id="1898716at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002487">
        <property type="entry name" value="TF_Kbox"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01486">
        <property type="entry name" value="K-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51297">
        <property type="entry name" value="K_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="K-box" evidence="1">
        <location>
            <begin position="27"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="167" mass="19410" checksum="35EF0A7C75859B0F" modified="2014-02-19" version="1" fragment="single">SVRATIERYKKASAASTNAESVSEVNTQFYQQESSKLRRQIRDIQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREIELQNHNNYLRAKIAEHERAQQQQQQSNMMQGTLCESLPSQSYDRNFFPVNLIPSDQQYSRQDQTALQLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKV4</accession>
    <name>V7BKV4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ras-related protein RABA4d</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G257200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKV4"/>
    <dbReference type="SMR" id="V7BKV4"/>
    <dbReference type="STRING" id="3885.V7BKV4"/>
    <dbReference type="Gramene" id="ESW17648">
        <property type="protein sequence ID" value="ESW17648"/>
        <property type="gene ID" value="PHAVU_007G257200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDHIERW"/>
    <dbReference type="OrthoDB" id="9989112at2759"/>
    <dbReference type="PhylomeDB" id="V7BKV4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01868">
        <property type="entry name" value="Rab11_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000274">
        <property type="entry name" value="ras-related protein RABA5a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050209">
        <property type="entry name" value="Rab_GTPases_membrane_traffic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47979">
        <property type="entry name" value="DRAB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00177">
        <property type="entry name" value="ARF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="222" mass="24594" checksum="90D1CD8DBAD9E1E4" modified="2014-02-19" version="1">MSNLYGDFSQKIDYVFKVVLIGDSAVGKTQLLARFARNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKCDLGTLKAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILSEIYRLISKKTLTANDDADPNGSSGLLKGTKIIVPNQDMNAEKKGGCCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BM08</accession>
    <name>V7BM08_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Formin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G090300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the formin-like family. Class-I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BM08"/>
    <dbReference type="SMR" id="V7BM08"/>
    <dbReference type="STRING" id="3885.V7BM08"/>
    <dbReference type="Gramene" id="ESW19024">
        <property type="protein sequence ID" value="ESW19024"/>
        <property type="gene ID" value="PHAVU_006G090300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1922">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESFHSCV"/>
    <dbReference type="OrthoDB" id="1668162at2759"/>
    <dbReference type="PhylomeDB" id="V7BM08"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045010">
        <property type="term" value="P:actin nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2220">
        <property type="entry name" value="Formin, FH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015425">
        <property type="entry name" value="FH2_Formin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042201">
        <property type="entry name" value="FH2_Formin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027643">
        <property type="entry name" value="Formin-like_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213:SF177">
        <property type="entry name" value="FORMIN-LIKE PROTEIN 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23213">
        <property type="entry name" value="FORMIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02181">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00498">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101447">
        <property type="entry name" value="Formin homology 2 domain (FH2 domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51444">
        <property type="entry name" value="FH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754677" description="Formin-like protein" evidence="4">
        <location>
            <begin position="17"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="domain" description="FH2" evidence="5">
        <location>
            <begin position="353"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="301"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="606"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="232"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="262"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="301"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="319"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="333"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="615"/>
            <end position="625"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW19024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="768" mass="85867" checksum="67B8C67A0E2D998C" modified="2014-02-19" version="1">MRFIITLLVFLSLQRANILTVDAAWSAVGNENQIKKSLGVDENENKETPRLENFRTLLGLKSLNRFHTRRSCCGVFDSDFVSLSASLPSKTEAEAPNSELHVHLGSYQSHRSMPLRKIQQQDRGSSDRTTLVALVVSGGVATLICALGCVCVCKRFRNQKRKPNRTMPLFSKNGRTGGTYHHSSSNVSLNSDPDLLYLEQTCETQSITSSHSSLKRAIYEKKALSQEEHDNASTGSSSTKETLSVHEDLVYDGGKASSGEKTVPEESHSSSDYESFHSCVETEPLFLCPTNVISATAQFPCSSHNSTSKVESNQSPSIPKHEEQKRSETSQPSIPPPPSPPPFLKENINSVIKTPPSQQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFELDEVMIESLFGYNLQNSIKNNEAKSKTPSPKEHVLEPKRLQNIAILSKALNITAAEVCEALILGKGLSLQQLEALVKMVPTKEEEDKLLNYKGRVNELGFAENFVRVMLSIPFAFKRVEAMLYRETFEDEVTHISNSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKSIMGQKSENRTEEEKEEDYRRMGLNLVSGLSAELCNVKKTATIDLNVLASSVSNLSNGLANMQNLVKGLLYEDEKNKSFVISMKWFLNYAERKVQELHGDEDRVMGGVKEVTEYFHGDVNDEESNPLQIFVIVRDFLEMVNNVCNGLKRSMKSPRTHCIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMK2</accession>
    <name>V7BMK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Cytochrome P450 71D11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G028100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMK2"/>
    <dbReference type="SMR" id="V7BMK2"/>
    <dbReference type="STRING" id="3885.V7BMK2"/>
    <dbReference type="Gramene" id="ESW18285">
        <property type="protein sequence ID" value="ESW18285"/>
        <property type="gene ID" value="PHAVU_006G028100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DKKHWKH"/>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11072">
        <property type="entry name" value="CYP71-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000008">
        <property type="entry name" value="Cytochrome P450 71D8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955:SF8">
        <property type="entry name" value="CYTOCHROME P450 71D11-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955">
        <property type="entry name" value="CYTOCHROME P450 FAMILY 71 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 9" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755125" description="Cytochrome P450 71D11" evidence="10">
        <location>
            <begin position="17"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="444"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW18285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="507" mass="57692" checksum="D2BF9CAE9A6015B7" modified="2014-02-19" version="1">MALLFFCLVFISCVFTTLVVRKIGNTNKKGEDTPCNMPHGPRKLPVIGNIHNLLFSQPHRKLRDLALKHGPLMHLQLGEVSTIVISSPECVKEVMKTHDINFATRPKVLASEIISYNSTSIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEELSNLVKWIDSEKGSPINLTLALLSSIYKIASRSAFGKKCKDQENFISEMKKATELFAGFNIGDFFPSSTWLQLVSGLRHKLEKSHQQVDQILENIINEHKEAKSKAKDDQSEAEDLVDVLIQYEDGRKKDFSLTRNNIKAIILDIFAAGGDTSATVIDWAMAEMVKDPRIMKKAQSEVREAFSGKGRVDENSINELKYLKLVVKETMRLHPPASLLLPRECGQACEIHGYHIPAKSKVIINAWTIGRDPNYWTEPERFYPERFTASTIDYKGTNFEFIPFGAGRRICPGSTFALRTIELALAMLLYHFDWKLPSGMRSEELNMSEVFGVTMKRKYDLFLVPFPYHPLPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN29</accession>
    <name>V7BN29_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G041500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN29"/>
    <dbReference type="Gramene" id="ESW18443">
        <property type="protein sequence ID" value="ESW18443"/>
        <property type="gene ID" value="PHAVU_006G041500g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1430766at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="188" mass="21427" checksum="6EEE3527EFC58854" modified="2014-02-19" version="1">MNTSKTNKIVSQIQHQPGGKRVTKQAIIDMNFNKESRLSADSALQRIGFDKGTAWNIVAGVSKDLHGTGKATIAIEFCEMKRVHLENLPNLRSFSSGNIVEWQALENVVANQCPNFKKFGLRMIKNSQLKSIFILEYEGQIVDIDNKVVAYLFELLVSSLSNLILHIEFFNIQKSWYFITCLLNFCYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNC7</accession>
    <name>V7BNC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G126800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNC7"/>
    <dbReference type="SMR" id="V7BNC7"/>
    <dbReference type="STRING" id="3885.V7BNC7"/>
    <dbReference type="Gramene" id="ESW19457">
        <property type="protein sequence ID" value="ESW19457"/>
        <property type="gene ID" value="PHAVU_006G126800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HASEAHN"/>
    <dbReference type="OrthoDB" id="5588846at2759"/>
    <dbReference type="PhylomeDB" id="V7BNC7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000972">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000990">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF28">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="10"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="194"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="229"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="264"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="299"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="401"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="436"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="471"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="506"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="541"/>
            <end position="575"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="576"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="646" mass="73417" checksum="902AEEE83F4CE5C5" modified="2014-02-19" version="1">MKTPHLFHLRRRFATKYTARITSSAPTGRSLAAEVTPPPPLPSDPRGYLLPRRDLICKATQILLSPPPSSFSDPFSDLSDYLQSLSLSLSPLEASEILKTLKNPSLALKFFHFCPSLSSDFRHESFTYNRLFLILSKSTNPARFDQARDLLSHMHRHAVRGSISTVNILVGFFGSGEDLERCVALVKKWDLRLNAYTYKCLLQAYLRSRDSSTAFQVYLDMVRRGYKLDIFGYNMLLDALAKDEKVDKAYKVFEDMKRRYCEPDVFTYTIMIRMTGKAGKTEESLVFFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAILLFSKMVENDCQPNEFTYSVILNLLVAEGKLNELDNIVDISKKYMNKQIYAYFVRTLSKLGHASEAHRLFCYMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNRVHEKGITTDTIMYNTAFTALGRLKQISHIHDLYEKMKLDGPPPDIFTYNILISSFGRAGRVDIAVKIFEELENSNCKPDVISYNSLINCLGKNGDIDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMLAEECTPNLITYNILLDCLERCGRTAEAVDLYSKLKQQGLTPDSITYTVLERLQSGGHGKLRFRRQNPITGWVVSPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS09</accession>
    <name>V7BS09_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G157100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS09"/>
    <dbReference type="SMR" id="V7BS09"/>
    <dbReference type="Gramene" id="ESW19808">
        <property type="protein sequence ID" value="ESW19808"/>
        <property type="gene ID" value="PHAVU_006G157100g"/>
    </dbReference>
    <dbReference type="OMA" id="HGTMISK"/>
    <dbReference type="OrthoDB" id="1429867at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45676:SF159">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45676">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL51-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW19808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="74" mass="8362" checksum="DE855204112773A9" modified="2014-02-19" version="1">MRALPPILCFQGDQATQTQCSICIEEFKNGELVQPFAVCLHQFHLDCINSWLFVGKTNCPVCRQHLSIATQTTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT30</accession>
    <name>V7BT30_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SHSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G150600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT30"/>
    <dbReference type="SMR" id="V7BT30"/>
    <dbReference type="STRING" id="3885.V7BT30"/>
    <dbReference type="Gramene" id="ESW19731">
        <property type="protein sequence ID" value="ESW19731"/>
        <property type="gene ID" value="PHAVU_006G150600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0710">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PENHVNW"/>
    <dbReference type="OrthoDB" id="1431247at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.790:FF:000076">
        <property type="entry name" value="15.4 kDa class V heat shock protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031107">
        <property type="entry name" value="Small_HSP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11527">
        <property type="entry name" value="HEAT-SHOCK PROTEIN 20 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="4">
        <location>
            <begin position="21"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="15593" checksum="277B5B378E2C6056" modified="2014-02-19" version="1">MEFPPSHSLPWQYFIPSHLLFPYNFIPQNYVHWTETPESHIFSADIPGVRKEELKVEVEDSRYLIIRTEAVDESTEPARKFERKFRLPGRVELDGISAGYEDGVLTVTVPRSIRRGFYIDPADVSENLEVLARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVQ7</accession>
    <name>V7BVQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Lycopene beta-cyclase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G122400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Carotenoid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the lycopene cyclase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVQ7"/>
    <dbReference type="STRING" id="3885.V7BVQ7"/>
    <dbReference type="Gramene" id="ESW22049">
        <property type="protein sequence ID" value="ESW22049"/>
        <property type="gene ID" value="PHAVU_005G122400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQD7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMIRGSQ"/>
    <dbReference type="OrthoDB" id="1716816at2759"/>
    <dbReference type="PhylomeDB" id="V7BVQ7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009975">
        <property type="term" value="F:cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016860">
        <property type="term" value="F:intramolecular oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016117">
        <property type="term" value="P:carotenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.60:FF:000101">
        <property type="entry name" value="lycopene epsilon cyclase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010108">
        <property type="entry name" value="Lycopene_cyclase_b/e"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01790">
        <property type="entry name" value="carotene-cycl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39757">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39757:SF9">
        <property type="entry name" value="CAPSANTHIN_CAPSORUBIN SYNTHASE, CHROMOPLAST PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05834">
        <property type="entry name" value="Lycopene_cycl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0125">Carotenoid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW22049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="499" mass="56723" checksum="C3CF8ABA1348B28E" modified="2014-02-19" version="1">MGTRLMLSSQTPPLKPHQPLHSNSPSFPLTKIHYTPSRKLIRGKRVHSTSRYGNFLDLKPEHQPEALDFDLPWCHPSDRARFDVIIIGAGPAGVRLAEQVSLYGVKVCCVDPDPLSVWPNNYGVWVDEFENLGLEDCLDKTWPMACVYVDDNKTKYLDRCYGRVSRRKLKERLIEGCVSNGVRFHKAKAWEVKHQEFESSVLCDDGVELKGSLVIDASGFGSRFIEYDKVRNQGYQIAHGVLVEVEEHPFDLDKMVLMDWRDSHLGNEPSLRVSNSRFPTFLYAMPFSSNLIFLEETSLVSRPALSYMEVKRRMVARLRHLGIRVKRVLEDEKCLIPMGGPLPRIPQNVMAIGGTSGVVHPSTGYMVARTMAVAPVVAFAIAECLGSTRMIRGKQLYAKVWNSMWPIEKRMVREFYSFGMETLLKLDLNGSRNFFNAFFDLKPYYWQGFLSSKLTLKELVWLSLSLFGHASNPSKFDITTKCPVPLAKMMGNIALEYKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BW78</accession>
    <name>V7BW78_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G059100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BW78"/>
    <dbReference type="SMR" id="V7BW78"/>
    <dbReference type="STRING" id="3885.V7BW78"/>
    <dbReference type="Gramene" id="ESW21298">
        <property type="protein sequence ID" value="ESW21298"/>
        <property type="gene ID" value="PHAVU_005G059100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPNQCKE"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009805">
        <property type="term" value="P:coumarin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000023">
        <property type="entry name" value="Feruloyl CoA ortho-hydroxylase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209">
        <property type="entry name" value="OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209:SF230">
        <property type="entry name" value="SCOPOLETIN 8-HYDROXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6 7" id="KW-0408">Iron</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="8">
        <location>
            <begin position="203"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW21298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="362" mass="40144" checksum="4A2A9C26D18D319C" modified="2014-02-19" version="1">MAPSFNSSNSLYDFVVRDGNGVKGLVDSGVSEVPERYIQPPRERIRKHDSGVCDDPPIDLSKLNGAEHEKVVDEIARAAETLGFFQVVNHGVPLELLESLKDAAHTFFSLPPEKKAVYCSGVSPSPRVKYGTSFVPEKEKALEWKDYISMTFSSEEEALQYWPNQCKEVALEYLKLSTKMVRDIVEALIGKLGVTLKDSEMESLLGMKMVNMNYYPACPNPDLTVGVGRHSDMGAITVLLQDGIGGLYVKVDQQNDADKEEWLEIPPIPGALVINIGDTLQILSNGKYKSAEHRVRTTSSESRVSVPVFTMPKATERIGPLAEVVEKDGLARYRQVVLQDYMNNFFGNAHAGKKSLDFARIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY75</accession>
    <name>V7BY75_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G119500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY75"/>
    <dbReference type="Gramene" id="ESW22018">
        <property type="protein sequence ID" value="ESW22018"/>
        <property type="gene ID" value="PHAVU_005G119500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SEVT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1883654at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="34" mass="3645" checksum="330228B3AAF4AA7D" modified="2014-02-19" version="1">MACRELVVGNLDPQRKRSGGLRTKQAGRGSCRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY77</accession>
    <name>V7BY77_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein PLASTID MOVEMENT IMPAIRED 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G002200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WEB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY77"/>
    <dbReference type="SMR" id="V7BY77"/>
    <dbReference type="STRING" id="3885.V7BY77"/>
    <dbReference type="Gramene" id="ESW22878">
        <property type="protein sequence ID" value="ESW22878"/>
        <property type="gene ID" value="PHAVU_004G002200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22879">
        <property type="protein sequence ID" value="ESW22879"/>
        <property type="gene ID" value="PHAVU_004G002200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR0X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DASMECK"/>
    <dbReference type="OrthoDB" id="685331at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009904">
        <property type="term" value="P:chloroplast accumulation movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009903">
        <property type="term" value="P:chloroplast avoidance movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008545">
        <property type="entry name" value="Web"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32054">
        <property type="entry name" value="HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32054:SF2">
        <property type="entry name" value="PROTEIN PLASTID MOVEMENT IMPAIRED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05701">
        <property type="entry name" value="WEMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="509"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="43"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="110"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="197"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="338"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="575" mass="65739" checksum="CFBA82086BF6E42B" modified="2014-02-19" version="1">MAQSKPGLVKAAVNMYGNGIADVNGPLLREEFSTKSSSKAKELHRARRDIAMYKESKQAAESAKDKAETELSNAKRTVKDLFSMIGESSYRAKAQMREMASLKKYRKPSKNNSDNEHSRVMRELEHAKRELFQLKLEVASVWEEKLRAEKEIEASRSNVVACSRVAEKLMMEIEAANEEQVVVELARMDALKELRDIEALENARNKLKEGIKEIEESKELEKKLATTMSEIDILQNELKLVNKRVERGESMEHTKGDIGVLETIKKEIEAAKKELALIRDQGFSFMASMDVTRNELKQVNAEAFHSKNRESKMGTKVRNLSYKVLRAKSKLEAVTAAEEKAKSVVNNLSQTLDELRSETEAAKKEKELIKEEVTGTEEEIKRALWEIKESEEKLEGAMQELGRVKSSEVLALEKLKIMSENAMRERSLTKGRSLIVISKFEYEYLCKHAAEAKEVADKKVEAAKAWVEAAKANEKEMVMKRRIAERKLEVYGKEKMVPKRVNSEEIENWSKKREKYPSRKSNNKFEGSTTPSRVYRFQKGGASPGPRPLSPFIVKKKKKVIQNWTKIFRGKKEKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZW6</accession>
    <name>V7BZW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_004G047500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the AAA ATPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZW6"/>
    <dbReference type="SMR" id="V7BZW6"/>
    <dbReference type="STRING" id="3885.V7BZW6"/>
    <dbReference type="Gramene" id="ESW23444">
        <property type="protein sequence ID" value="ESW23444"/>
        <property type="gene ID" value="PHAVU_004G047500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0731">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPSLMGR"/>
    <dbReference type="OrthoDB" id="1413014at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19501">
        <property type="entry name" value="RecA-like_FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000277">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000061">
        <property type="entry name" value="Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011546">
        <property type="entry name" value="Pept_M41_FtsH_extracell"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF110">
        <property type="entry name" value="INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 3, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06480">
        <property type="entry name" value="FtsH_ext"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0934">Plastid</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="16">
        <location>
            <begin position="385"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="621"/>
            <end position="642"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW23444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="642" mass="71160" checksum="84950CAA6174E1B1" modified="2014-02-19" version="1">MACFSLPCNTGSFVVVTPSMAQRTYFGVCGGLGTRSFVFTSLGFNQCYKFPHGFVWDKKVGYCGGRSRVPSLRVPYCCKTPLGVSSNNKIEPFASRSKGERKTHYGKGEGNRLKKRFSLRLRPRLRLLAMRMKRASIKSILNELEVLIRKNIRAVAFSASVSVVFSLCFMFLKLTALPPPKSVPYSDLITSLQNGYVEKVLVEEGSRRIYYNMKSQIVENDHVSGEESQVVDVSIDADVDKMGSESASRAGQTPVVNVLKKFSKTRASTPEWQYSTRKIDHDGKFLVSLMRENGVTYSSAPQSALMSMRSTLITVITLWIPLIPLMWILYRQLSTANSPARKQRPNSQTVGFDDVEGVDSAKVELMEIVSCLQGDINYRKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFTVSASEFVELFVGRGAARIRDLFNSARKFAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESEMRVVVIAATNRPEALDPALCRPGRFSRKVYVGEPDEEGRRKILAVHLRGVPLEEDTNIICHLIASLTTGFVGADLANIVNESALLAARRGSETVAREDIMEAIERAKFGINDKQLRSSKLSKELTKLFPWMPSLMGKNERRQDDQQGPLGYQSLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1C9</accession>
    <name>V7C1C9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Alpha-mannosidase</fullName>
            <ecNumber evidence="15">3.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_004G022500g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>N(4)-{beta-D-GlcNAc-(1-&gt;2)-alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;6)]-alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc}-L-asparaginyl-[protein] + 2 H2O = 2 alpha-D-mannopyranose + an N(4)-{beta-D-GlcNAc-(1-&gt;2)-alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc}-L-asparaginyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:56052"/>
            <dbReference type="Rhea" id="RHEA-COMP:14368"/>
            <dbReference type="Rhea" id="RHEA-COMP:14369"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28729"/>
            <dbReference type="ChEBI" id="CHEBI:60615"/>
            <dbReference type="ChEBI" id="CHEBI:60625"/>
            <dbReference type="EC" id="3.2.1.114"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="15">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the glycosyl hydrolase 38 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.-" evidence="15"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1C9"/>
    <dbReference type="SMR" id="V7C1C9"/>
    <dbReference type="STRING" id="3885.V7C1C9"/>
    <dbReference type="Gramene" id="ESW23148">
        <property type="protein sequence ID" value="ESW23148"/>
        <property type="gene ID" value="PHAVU_004G022500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1958">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPWGQHP"/>
    <dbReference type="OrthoDB" id="10261055at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004572">
        <property type="term" value="F:mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042538">
        <property type="term" value="P:hyperosmotic salinity response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006013">
        <property type="term" value="P:mannose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006491">
        <property type="term" value="P:N-glycan processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018279">
        <property type="term" value="P:protein N-linked glycosylation via asparagine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd10809">
        <property type="entry name" value="GH38N_AMII_GMII_SfManIII_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1270.50:FF:000001">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.70.98.30:FF:000007">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.110.10:FF:000005">
        <property type="entry name" value="Alpha-mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1180:FF:000019">
        <property type="entry name" value="Alpha-mannosidase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.110.10">
        <property type="entry name" value="Glycoside hydrolase 38, N terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.50">
        <property type="entry name" value="Glycoside hydrolase family 38, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="entry name" value="Golgi alpha-mannosidase II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.30">
        <property type="entry name" value="Golgi alpha-mannosidase II, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011682">
        <property type="entry name" value="Glyco_hydro_38_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015341">
        <property type="entry name" value="Glyco_hydro_38_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037094">
        <property type="entry name" value="Glyco_hydro_38_cen_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000602">
        <property type="entry name" value="Glyco_hydro_38_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027291">
        <property type="entry name" value="Glyco_hydro_38_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028995">
        <property type="entry name" value="Glyco_hydro_57/38_cen_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050843">
        <property type="entry name" value="Glycosyl_Hydrlase_38"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11607">
        <property type="entry name" value="ALPHA-MANNOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11607:SF3">
        <property type="entry name" value="LYSOSOMAL ALPHA-MANNOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09261">
        <property type="entry name" value="Alpha-mann_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07748">
        <property type="entry name" value="Glyco_hydro_38C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01074">
        <property type="entry name" value="Glyco_hydro_38N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00872">
        <property type="entry name" value="Alpha-mann_mid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88688">
        <property type="entry name" value="Families 57/38 glycoside transferase middle domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="Galactose mutarotase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="Glycoside hydrolase/deacetylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="13 15" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="10" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="6 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7 15" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 38 central" evidence="18">
        <location>
            <begin position="487"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="16">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00093232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU361199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="SMART" id="SM00872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW23148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1152" mass="131692" checksum="8069EB7E0D9BCDDF" modified="2014-02-19" version="1">MPSSSRRGAAWASSILPSSNPKSKAPRKGRRRTVLKDFIFSNFFSIGLVISLSLFLLILLRFGVPKPIATHFRTRSSRARKSFGRRPLPTVFNTSALAGAGAVDITTKALYDKIEFLDVDGGAWKQGWSVTYRGNEWDAEKLKVFVVPHSHNDPGWKLTVEEYYDRQSRHILDTIVQTLTKDSRRKFIWEEMSYLERWWRDASDEMKESFINLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIAEGNMWLNDTIGFVPKNSWAIDPFGYSSTMAYLLRRMGFDNMLIQRTHYEVKKELAWHKKLEYIWRQSWDADETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMQGFVYEQCPWGQYPVETTLENVQERALKLLDQYRKKSTLYRTNTLLVPLGDDFRYINVEEAEAQFRNYQMLFDYINSNPSLNAEAKFGTLEDYFVTLREEAERINYSFPGEIGSGLVEGFPSLSGDFFTYSDRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEIMVALILGCCRRSHCEKFAMGFSYKLTAARRNLALFQHHDGVTGTAKDHVVMDYGMRMHTSLLDLQIFMSKAVEALLGIRYDKLDHSPSQFEPAIVRSKYDAQPLHKVIGVHDGTYQSVVFFNPLEQTSQEVVMLVVDSPDVTVVDSNWSCVQSQILPELQHHNSKIFTGKHRLYWEVSVPALGLETYYISNGFDECEKAKPAKLKIFSKSNSIACPTPYSCVKIESDVAEIENQNQKLTFDVKYGLLQKIISKNSSPNIVKEEIGLYSSSGGAYLFKPNGDAQPFIEEGGQLLISEGPLMQEVYSYPRTTWEKAPISHSTRIYSGESTVQGFIIEKEYHVELLGHDFNDKELIVRYKTDIDNKKIFYSDLNGFQMSRRETYDKIPLQGNYYPLPSLAFIQGSNGHRFSVHSRQSLGVASLKNGWLEIMLDRRLVRDDGRGLGQGVMDNRVMNVVFHLTMETNVSATSNLVSTPFAYSPSLLSHCVGSHLNYPLHAFISKKPQDKSAKPPPRSFSPLAAPLPCDLHIVNFKVPKPLKFLQQPAEGPRFALIFHRRHWDSSYCRKGRSQCTNLGDVTVNLFSMFQDLTVSKVKATSLNLLHEDPEVMGFSEQFGDLAQEGHVAISPMEIQAYKLELRPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C286</accession>
    <name>V7C286_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">F-box associated beta-propeller type 1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G051400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C286"/>
    <dbReference type="SMR" id="V7C286"/>
    <dbReference type="STRING" id="3885.V7C286"/>
    <dbReference type="Gramene" id="ESW23488">
        <property type="protein sequence ID" value="ESW23488"/>
        <property type="gene ID" value="PHAVU_004G051400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0019">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DITEGTH"/>
    <dbReference type="OrthoDB" id="1428343at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006527">
        <property type="entry name" value="F-box-assoc_dom_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07734">
        <property type="entry name" value="FBA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box associated beta-propeller type 1" evidence="5">
        <location>
            <begin position="109"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="307" mass="36328" checksum="02BFED555308E0A0" modified="2014-02-19" version="1">MTNDETLVLKSEMSEVLRLMKKTFYSNEEIFLRELINNASNNINAQKPLRGTKITLFLKDNQLEYLQETTIKNVISKHYQLITHPIYLWSENNKDHWQLINIWLQWDIAGSWEIYSLRSNSWRKLKYDISINSRCEIHDKFYLEGMCHWLGNWQESYDKFRKTYMVSFDLSNEEWFITPLPPIDKPLEIYDNFNINSVESRLFLFNGSISLISNYYETTTFSISILAEIGKKETWTKLITLGPLPYFSRPIGIGNMSNILFRTIDGKLAWLDLRTHLVEKLDVNAHRLICQLIVYKENLFPTKGINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2C5</accession>
    <name>V7C2C5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Remorin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G116700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the remorin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2C5"/>
    <dbReference type="SMR" id="V7C2C5"/>
    <dbReference type="STRING" id="3885.V7C2C5"/>
    <dbReference type="Gramene" id="ESW24279">
        <property type="protein sequence ID" value="ESW24279"/>
        <property type="gene ID" value="PHAVU_004G116700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXYN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IAIVHKE"/>
    <dbReference type="OrthoDB" id="684343at2759"/>
    <dbReference type="PhylomeDB" id="V7C2C5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005516">
        <property type="entry name" value="Remorin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005518">
        <property type="entry name" value="Remorin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31775">
        <property type="entry name" value="OS02G0117200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31775:SF5">
        <property type="entry name" value="REMORIN 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03763">
        <property type="entry name" value="Remorin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03766">
        <property type="entry name" value="Remorin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Remorin N-terminal" evidence="5">
        <location>
            <begin position="39"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Remorin C-terminal" evidence="4">
        <location>
            <begin position="95"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="130"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="26"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="37"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW24279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="205" mass="22358" checksum="4E993F1228C716C6" modified="2014-02-19" version="1">MTEQQPKTVESESAAPAAPSSQAPAEPEPVPVPVPEAPKDVAEEKSVIPVPSSDEKPDESKALVLVEKTQEVAEVKPTEGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSAISAWENSKKASVEAELKKIEEQLEKKKAEYAEKIKNKIATIHKEAEEKRAIIEAKKGEDLLNAEETAAKYRATGTAPKKLLGCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3N9</accession>
    <name>V7C3N9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">IST1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G086100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IST1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3N9"/>
    <dbReference type="SMR" id="V7C3N9"/>
    <dbReference type="STRING" id="3885.V7C3N9"/>
    <dbReference type="Gramene" id="ESW23905">
        <property type="protein sequence ID" value="ESW23905"/>
        <property type="gene ID" value="PHAVU_004G086100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIFKPHE"/>
    <dbReference type="OrthoDB" id="29853at2759"/>
    <dbReference type="PhylomeDB" id="V7C3N9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016197">
        <property type="term" value="P:endosomal transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009555">
        <property type="term" value="P:pollen development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1260.60:FF:000003">
        <property type="entry name" value="IST1-like protein isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.60">
        <property type="entry name" value="Vacuolar protein sorting-associated protein Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005061">
        <property type="entry name" value="Ist1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042277">
        <property type="entry name" value="IST1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12161">
        <property type="entry name" value="IST1 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12161:SF5">
        <property type="entry name" value="IST1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03398">
        <property type="entry name" value="Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="204"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="278"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="327"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="389"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="32"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="289"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="327"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="389"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="414"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="433"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="448"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="469"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="501"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="515"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="525" mass="58576" checksum="2C9F2E99E803DF6F" modified="2014-02-19" version="1">MAMFDSLFNKGFKAAKCKTLLKLTIPRIKLLRNRRENQLKNMRRDIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLFAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLEWDPAASETEFFKKHEDLLNGPTQFFSGSKLPLPDEKPQEEMYSSHETPNKEEPDSDSGSDTLEFPEVPKVSVRPNANVATAPEIVTHLTMEPLEVDLDSSSNSGDFEDVKQEQVEDRSTVHKNELHTSIAKENIQFVPFISPPALSSGSFSARPSDSSPTFSSAKSEPKVDLQDVLAAAHAAAETAERAAAAARTAASLAQIRINELTKKRSDEHVSDSSSENPFYAGGDNESPKKDKHFTEQNSAGNSDVHNRKDLEHYQDHYTSPDSHSSSFPSFNTLKEDYDSSPPSNHVLNDNFSSHQPKRLPSMDDDSYFSYPNLFTSQNSSVGSQTHSDHSRSPHDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C430</accession>
    <name>V7C430_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G064100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the RNase T2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C430"/>
    <dbReference type="SMR" id="V7C430"/>
    <dbReference type="Gramene" id="ESW23636">
        <property type="protein sequence ID" value="ESW23636"/>
        <property type="gene ID" value="PHAVU_004G064100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1642">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWPPASC"/>
    <dbReference type="OrthoDB" id="1898737at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033897">
        <property type="term" value="F:ribonuclease T2 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006401">
        <property type="term" value="P:RNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01061">
        <property type="entry name" value="RNase_T2_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.730.10">
        <property type="entry name" value="Ribonuclease T2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033697">
        <property type="entry name" value="Ribonuclease_T2_eukaryotic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001568">
        <property type="entry name" value="RNase_T2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036430">
        <property type="entry name" value="RNase_T2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018188">
        <property type="entry name" value="RNase_T2_His_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033130">
        <property type="entry name" value="RNase_T2_His_AS_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11240:SF75">
        <property type="entry name" value="RIBONUCLEASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11240">
        <property type="entry name" value="RIBONUCLEASE T2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00445">
        <property type="entry name" value="Ribonuclease_T2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55895">
        <property type="entry name" value="Ribonuclease Rh-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00530">
        <property type="entry name" value="RNASE_T2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00531">
        <property type="entry name" value="RNASE_T2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="7">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR633697-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW23636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="25073" checksum="C75ADD9606881EC8" modified="2014-02-19" version="1" fragment="single">EVVIGEFQGERCRKVLVFLFFHGYADAFDYWKISEIWPRGLCHGNGLCVTKKPKQLLFTIHGLWPSNFYRKGPSSCTNETLDRSQITDLDADLVQVWPSYYRDGDEEFWRHEWERHGTCSNLQRFDFFTLTLDIYARNNLTEILENAGIVHGKTYNINIITSAIRTALGVKPQLICKYTTSILTEIRICLDKSIMPQYINCDPPPPLVACPNSINFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4L0</accession>
    <name>V7C4L0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">Myosin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_003G005100g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4L0"/>
    <dbReference type="SMR" id="V7C4L0"/>
    <dbReference type="Gramene" id="ESW25074">
        <property type="protein sequence ID" value="ESW25074"/>
        <property type="gene ID" value="PHAVU_003G005100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0160">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIMCKIN"/>
    <dbReference type="OrthoDB" id="6108017at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016459">
        <property type="term" value="C:myosin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000146">
        <property type="term" value="F:microfilament motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007015">
        <property type="term" value="P:actin filament organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030048">
        <property type="term" value="P:actin filament-based movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01384">
        <property type="entry name" value="MYSc_Myo11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.530:FF:000002">
        <property type="entry name" value="Class V myosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.820:FF:000001">
        <property type="entry name" value="Myosin heavy chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.190:FF:000001">
        <property type="entry name" value="unconventional myosin-Va"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036018">
        <property type="entry name" value="MYSc_Myo11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004009">
        <property type="entry name" value="SH3_Myosin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF751">
        <property type="entry name" value="MYOSIN HEAVY CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02736">
        <property type="entry name" value="Myosin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00193">
        <property type="entry name" value="MYOSINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00242">
        <property type="entry name" value="MYSc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51844">
        <property type="entry name" value="SH3_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="4 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="6 11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8 10" id="KW-0505">Motor protein</keyword>
    <keyword evidence="7 10" id="KW-0518">Myosin</keyword>
    <keyword evidence="3 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5012836402" description="Myosin motor domain-containing protein" evidence="13">
        <location>
            <begin position="16"/>
            <end position="1206"/>
        </location>
    </feature>
    <feature type="domain" description="Myosin N-terminal SH3-like" evidence="15">
        <location>
            <begin position="20"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="Myosin motor" evidence="14">
        <location>
            <begin position="74"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="10">
        <location>
            <begin position="611"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1187"/>
            <end position="1206"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="921"/>
            <end position="1003"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="1052"/>
            <end position="1108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="168"/>
            <end position="175"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="1206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW25074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="18">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1206" mass="138944" checksum="E828793145B85E07" modified="2014-02-19" version="1" fragment="single">MIKALIILLNAQAAGQLNYVAGSFVWVEDPELAWIDGEIQDSKKDEVTIIFKSGTRVVSKSTNMYPKDPEFPPNGVEDMTKLAYLHEPGVLQNLKIRYSGNKIYTYTGNILIAVNPFQRLPHLTETSTMMKYKGAAFGEQSPHPFAIASSAYSKMINEKRSQSILVSGESGAGKTESTKMLMQYLAFLGGRAETEGRSVEQQVLEYNFSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSNPERNYHCFYMLCAAPQEDVGKYKLEDPRKFHYLNQSSCIELDGVDDSKEYLATKRAMEVVGISSEEQDAIFRTVAAILHLGNVDLVNGVEEVLDSSQPKDEKSYFHLKTAAELLMCDEKSLEDSFCKRIMVTRGDTITKSLDPNSAALSRDALAKIIYSRLFDWIMCKINDTIGQDPKSNSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDVIDLIEKKPVGIIALLDEACMFPRSTHETFAEKMYQTFIGKKRFNKPKLSRTDFTIKHYAGDVTYQTNLFLDKNKDYVIPEHATLLRASKCSFVSGLFPPSPQDATKSKKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNVLKPRIFDNNNVLQQLRCGGVLEAIRISCAGYPTRKKFEEFVQRFSILEPEVLKSCRDGMTACKRILDRVDLKDYQIGKTKVFLRAGQMAELDACRAEALGRFATVIQRKFRTFLCQKQYILMQLSAIELQRVAKGVIYVNPLGLFEVFYYVINEILLHVDYIFFIKVFMLDVRYYYAVVDSTFMRSKFNVGKLARHQYECMRRKAACLKIQKDFLMHISRNAYKTIYASAIYIQIGLRGMVARKELRFRKRSLAAIVIQVLYRGYKDRTYFQRLKKATTFAVCSRKRALARRELRKLKMEAKTQENETLQQALQEKEVRLQEIVEAKTQETEKLKHALQEMQHQFQEIKEAKTHETEKLQHDLQEMKLQFQETKAVLIQEQAAKKVVEQPPTMQELVNSLEKKIVQELPTNVTNYELINKLTSENKHIKERIKLLEKKTSLQKLSANVTNNEFIHKLTSENEHLKEQISSLEKSMQDEFPINATHNELINKFHSENEHIKSSYSQLSPSQVCSLEISLRRHYHSRTSPSSSSHLWSLISNDLYHRDIVPTTPSLQASRHHTSTANFSSSLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7I1</accession>
    <name>V7C7I1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G0266001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7I1"/>
    <dbReference type="Gramene" id="ESW25328">
        <property type="protein sequence ID" value="ESW25328"/>
        <property type="gene ID" value="PHAVU_003G0266001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="20" mass="2381" checksum="722944F549FD6D90" modified="2014-02-19" version="1" fragment="single">ARFDVGVRILVSFNSNFYLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7R4</accession>
    <name>V7C7R4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">shikimate dehydrogenase (NADP(+))</fullName>
            <ecNumber evidence="1">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G0350001g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.25" evidence="1"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7R4"/>
    <dbReference type="SMR" id="V7C7R4"/>
    <dbReference type="STRING" id="3885.V7C7R4"/>
    <dbReference type="Gramene" id="ESW25427">
        <property type="protein sequence ID" value="ESW25427"/>
        <property type="gene ID" value="PHAVU_003G0350001g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25428">
        <property type="protein sequence ID" value="ESW25428"/>
        <property type="gene ID" value="PHAVU_003G0350001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0692">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RHWVADI"/>
    <dbReference type="OrthoDB" id="204377at2759"/>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01065">
        <property type="entry name" value="NAD_bind_Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10860:FF:000009">
        <property type="entry name" value="Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000172">
        <property type="entry name" value="Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10860">
        <property type="entry name" value="Leucine Dehydrogenase, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminoacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001381">
        <property type="entry name" value="DHquinase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089:SF1">
        <property type="entry name" value="BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE_SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="SHIKIMATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01487">
        <property type="entry name" value="DHquinase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51569">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="Aminoacid dehydrogenase-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate dehydrogenase substrate binding N-terminal" evidence="7">
        <location>
            <begin position="65"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase" evidence="6">
        <location>
            <begin position="184"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="SDH C-terminal" evidence="8">
        <location>
            <begin position="306"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="338" mass="36433" checksum="96133C7BEEA0B409" modified="2014-02-19" version="1" fragment="single">VPFIGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLQDLLYLYNLRQVAPDTKVYGIIGKPVGHSKSPILFNEVFKSVGYNGVYVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEAALECCDEVDPVAKSIGAVNCIIRRPTDGKLIGYNTDYVGAISAIEDGLRGKHNGGSTNISPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADAIGGDALTLSDLDSYHPEDSMILANTTSIGMQPKVDDTPISKHALKYYTLVFDAVYTPKITRLLKEAEESGATIVTGLEMFMGQAYGQYENFTGLPAPKELFRKIMEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7C858</accession>
    <name>V7C858_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G112700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C858"/>
    <dbReference type="Gramene" id="ESW26357">
        <property type="protein sequence ID" value="ESW26357"/>
        <property type="gene ID" value="PHAVU_003G112700g"/>
    </dbReference>
    <dbReference type="OMA" id="RASYPQW"/>
    <dbReference type="OrthoDB" id="1416711at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="75" mass="7893" checksum="49D6767DA7592595" modified="2014-02-19" version="1">MAGFVRGFADMMDGGDSNRGRASYPQWNPNMNSAPVPPASGLLNGDNQKLFGVTNNTNVKVKGDGNGAFTLGNFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8E5</accession>
    <name>V7C8E5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">Replication factor A C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G117700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the replication factor A protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8E5"/>
    <dbReference type="SMR" id="V7C8E5"/>
    <dbReference type="STRING" id="3885.V7C8E5"/>
    <dbReference type="Gramene" id="ESW26409">
        <property type="protein sequence ID" value="ESW26409"/>
        <property type="gene ID" value="PHAVU_003G117700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1735587at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04476">
        <property type="entry name" value="RPA1_DBD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047192">
        <property type="entry name" value="Euk_RPA1_DBD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013955">
        <property type="entry name" value="Rep_factor-A_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47165:SF4">
        <property type="entry name" value="OS03G0429900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08646">
        <property type="entry name" value="Rep_fac-A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Replication factor A C-terminal" evidence="6">
        <location>
            <begin position="144"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="285" mass="32973" checksum="1ABD89B93ECE1EFF" modified="2014-02-19" version="1">MVLQDEQGVQIHHRSGGHLYINSRVRYLKFTIINMISILRRYNWNLTRGGTEQELTKEGKVTKINVISIDCDGEVDNVVISIEFAKAKLFREKTPEDGFLHGTVRNTIAGLKDCREVNVITFLNFSYVFFLTDIYILLKQVNTFIVLATIKHIVDDDDWWYTACICNKAIYPDSKIFFCEKCNKHVMNVSLRYKVQLHVIDDTNSTMFMLFDREANSLTDKSYAEIFESHDKEIYDEDDNKGKGKLTMTGASCENITERQSSPMVQVVEDNLPLKTIKRTVKIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C947</accession>
    <name>V7C947_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">CRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_003G136300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C947"/>
    <dbReference type="SMR" id="V7C947"/>
    <dbReference type="STRING" id="3885.V7C947"/>
    <dbReference type="Gramene" id="ESW26644">
        <property type="protein sequence ID" value="ESW26644"/>
        <property type="gene ID" value="PHAVU_003G136300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1990">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IECNEIY"/>
    <dbReference type="OrthoDB" id="551352at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000373">
        <property type="term" value="P:Group II intron splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.110.60:FF:000002">
        <property type="entry name" value="CRS2-associated factor 1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.60">
        <property type="entry name" value="YhbY-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045278">
        <property type="entry name" value="CRS1/CFM2/CFM3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001890">
        <property type="entry name" value="RNA-binding_CRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035920">
        <property type="entry name" value="YhbY-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31846">
        <property type="entry name" value="CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31846:SF7">
        <property type="entry name" value="CRS1 _ YHBY (CRM) DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01985">
        <property type="entry name" value="CRS1_YhbY"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM01103">
        <property type="entry name" value="CRS1_YhbY"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75471">
        <property type="entry name" value="YhbY-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51295">
        <property type="entry name" value="CRM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="8" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="CRM" evidence="13">
        <location>
            <begin position="203"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="CRM" evidence="13">
        <location>
            <begin position="400"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="CRM" evidence="13">
        <location>
            <begin position="613"/>
            <end position="714"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="59"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="759"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="794"/>
            <end position="830"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="568"/>
            <end position="602"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="72"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="108"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="759"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="769"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="794"/>
            <end position="803"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="804"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="815"/>
            <end position="827"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW26644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="855" mass="97527" checksum="EA9C893B74281202" modified="2014-02-19" version="1">MALQPIPLNCASSTLCRSSSMHSLLFQHQAHVAFKFRVSSSNQIPQVQTQQQVKIVKKQKKNSHRPSFFHQIQDKWSHKSGSQREKFPWQESQHEEEQRQHHQQQQPQKEERREKLQNMEKPRASNFQFPKRFSPWPQAVNPSNARFASESYDSEEEDAEGVKGSGGSVGEGREGTVSKVSNVSERVNGERKKRRSNTLLAERTIPEHELGRLRKIALRTMERFDVGVKGITQELVALVHQKWRDSEVVKFKFGIPLSTQMKKAHQLLESKIGGIVIWRSGSSIVLYRGMTYKFPCVELYKKVNHVDNSLLGSGSDREASVQETAGTTESFIQDSEEYLKDMSENELMEMCDLNHLLDELGPRFIDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYGLRPCLTNKEMTNFRRLARTTAPHFALGRNRDLQGIASAMVKLWETSAIAKIAIKRGVPFTNNDRMAEELGKLTGGTLLSRNKEYIVFYRGNDFLPPVVTNTLNERQKQNLLHQEEEEKARQIALSITVSKTKASQVPLIAGTLAETRAATSNWGHQPNKQQIENMLRDSALSKLSALIKNHEKRLALAKAKFRKAEKALAKVLRDMDPADIPTDSETLTNEERFLFRKIGMSMKPYLLLGRRDVYSGTIENMHLHWKYRELVKLILKGRNPAQVKHIAISLEAESGGVLVSVDKDNRGHHIIIVYRGKNYSSPYVVRPKNLLTRRQAMARSVELQRREALKHHILDLQERIGLLKSEREDMKNGKEIDGSKTLHSTLDNPVSSDNDLEEIECNEIYFGEDDSDDEDMKNGKEIDGSKTLHSTLDNPVSSDNDLEEIECNEIYFGEDDSDDEDKKHQNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA02</accession>
    <name>V7CA02_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G163600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA02"/>
    <dbReference type="SMR" id="V7CA02"/>
    <dbReference type="STRING" id="3885.V7CA02"/>
    <dbReference type="Gramene" id="ESW26984">
        <property type="protein sequence ID" value="ESW26984"/>
        <property type="gene ID" value="PHAVU_003G163600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1072">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENEGMHR"/>
    <dbReference type="OrthoDB" id="45365at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd22152">
        <property type="entry name" value="F-box_AtAFR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006652">
        <property type="entry name" value="Kelch_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057499">
        <property type="entry name" value="Kelch_FKB95"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46344:SF16">
        <property type="entry name" value="KELCH MOTIF FAMILY PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46344">
        <property type="entry name" value="OS02G0202900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25210">
        <property type="entry name" value="Kelch_FKB95"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00612">
        <property type="entry name" value="Kelch"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117281">
        <property type="entry name" value="Kelch motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0880">Kelch repeat</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="F-box" evidence="4">
        <location>
            <begin position="69"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="FKB95-like N-terminal Kelch" evidence="5">
        <location>
            <begin position="161"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF25210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="428" mass="48428" checksum="4ED748F8772A6558" modified="2014-02-19" version="1">MDRVIQPPLVDTTACLCRVDTGLKTVAGAKRYVPGTKLCLRPDIKPSIHPTRNKPARGDRSRNQSPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLVGNFFYSLRKSLGIAEEWIYVIKRDRDAKISWHAFDPVYQLWQPLPPVPREYSGALGFGCAVLNGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENEGVHRSLRSAEVYDPNKNRWSFVSDMSTAMVPFIGVVYDGKWFLKGLGPHQQVLSEVYQPENDSWYPIYDGMVSGWRNPSTTLNGKLYALDCKDGCKVRVYDEVTDSWSKHIDSKMHLGSSRALEAAALVPLNGKLCIIRNNMSISLVDVSKLEDLKGSSAEQLWETIAGKGQFKTLVTNLWSSLAGRNRLKSHIVHCQVLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAR0</accession>
    <name>V7CAR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">S-adenosylmethionine synthetase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G1202001g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAR0"/>
    <dbReference type="STRING" id="3885.V7CAR0"/>
    <dbReference type="Gramene" id="ESW26443">
        <property type="protein sequence ID" value="ESW26443"/>
        <property type="gene ID" value="PHAVU_003G1202001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1506">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASYMARY"/>
    <dbReference type="OrthoDB" id="5852090at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.10:FF:000021">
        <property type="entry name" value="S-adenosylmethionine synthetase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="S-ADENOSYLMETHIONINE SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="S-adenosylmethionine synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S-adenosylmethionine synthetase N-terminal" evidence="2">
        <location>
            <begin position="5"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="13739" checksum="647FBA15A82D00A1" modified="2014-02-19" version="1" fragment="single">MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB42</accession>
    <name>V7CB42_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Bidirectional sugar transporter SWEET</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G199300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SWEET sugar transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB42"/>
    <dbReference type="SMR" id="V7CB42"/>
    <dbReference type="STRING" id="3885.V7CB42"/>
    <dbReference type="Gramene" id="ESW27407">
        <property type="protein sequence ID" value="ESW27407"/>
        <property type="gene ID" value="PHAVU_003G199300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1623">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FYRTTRW"/>
    <dbReference type="OrthoDB" id="409725at2759"/>
    <dbReference type="PhylomeDB" id="V7CB42"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051119">
        <property type="term" value="F:sugar transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051260">
        <property type="term" value="P:protein homooligomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1280.290:FF:000001">
        <property type="entry name" value="Bidirectional sugar transporter SWEET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1280.290:FF:000002">
        <property type="entry name" value="Bidirectional sugar transporter SWEET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.290">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047664">
        <property type="entry name" value="SWEET"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004316">
        <property type="entry name" value="SWEET_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10791:SF159">
        <property type="entry name" value="BIDIRECTIONAL SUGAR TRANSPORTER SWEET5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10791">
        <property type="entry name" value="RAG1-ACTIVATING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03083">
        <property type="entry name" value="MtN3_slv"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="229" mass="26223" checksum="071F2842D4383256" modified="2014-02-19" version="1">MVNTNTIRTAVGIIGNVISFGLFMSPVPTFISIFKSKSVQNFKPDPYIATILNCGVWAFYGLPFVTPDNTLVISINSFGFFLEIFYTTVFFVYSPWNKRRKIMLIFLAEIIFIALLVFLVMTFVHTPKERKVIVGPICIVFNILMYFSPLTVMRQVIRTKSVKYMPFLLSFTNFANGIVWTAYALLKWDPFIVIPNGLGTLSGLTQLILYVMYYKSTNWDEEDETSSNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD29</accession>
    <name>V7CD29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Serine carboxypeptidase S28 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G259700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD29"/>
    <dbReference type="Gramene" id="ESW28107">
        <property type="protein sequence ID" value="ESW28107"/>
        <property type="gene ID" value="PHAVU_003G259700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2182">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CERFDVY"/>
    <dbReference type="OrthoDB" id="1735038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008239">
        <property type="term" value="F:dipeptidyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070008">
        <property type="term" value="F:serine-type exopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.980:FF:000005">
        <property type="entry name" value="Clan SC, family S28, unassigned serine peptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.980">
        <property type="entry name" value="Serine carboxypeptidase S28, SKS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008758">
        <property type="entry name" value="Peptidase_S28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042269">
        <property type="entry name" value="Ser_carbopepase_S28_SKS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010">
        <property type="entry name" value="PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010:SF115">
        <property type="entry name" value="SERINE CARBOXYPEPTIDASE S28 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05577">
        <property type="entry name" value="Peptidase_S28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="334" mass="36940" checksum="5EE8570E20D269F0" modified="2014-02-19" version="1">MESLNAKLNRTKIENPWFIFGGSYSGALSAWFRLKFPHLTCGSLASSAVVLAVYNFTEFDQQIGESAGPECKAVLQEITQLVEQKLASSGSEVKATFDADALEIDGDFFYYLADAAATAFQYGNPDKVCEPLVEAKKAGEDLVDAYAKYVKEYYSGTFGVTVQSYDQKYLKRTDINEDSASRLWWFQVCTEVAYFQVAPSNDSIRSSKVDTKYHLDLCENVFGKGTFPDVDATNLYYGGTKIAGSKIIFTNGSQDPWRHASKQTSSPDLPSYVVSCYNCGHCSDYRGCPQAPFTIGGSEKNCTSPDAVHKVRQKISDNMDLWLSECMDTGSSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEE0</accession>
    <name>V7CEE0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G292400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEE0"/>
    <dbReference type="SMR" id="V7CEE0"/>
    <dbReference type="STRING" id="3885.V7CEE0"/>
    <dbReference type="Gramene" id="ESW28509">
        <property type="protein sequence ID" value="ESW28509"/>
        <property type="gene ID" value="PHAVU_003G292400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZPT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ADFHQLM"/>
    <dbReference type="OrthoDB" id="642765at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF181">
        <property type="entry name" value="OS02G0764700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="7">
        <location>
            <begin position="92"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW28509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="25001" checksum="7064F1678B025064" modified="2014-02-19" version="1">MSSSASFSAATLTTEQELSVIVAALTNVVAGSTSSIPDFRLPSASQPPAATAFDRMVPPPSMDTCRECKIAGCLGCNFFPEEKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPVVDESLSMQQRETETVAAAEQLKNENPNQSMEVNAVEFGNSNTEFWDRIGEADFHQLMMMMDFAADSSDSATGNTLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEI4</accession>
    <name>V7CEI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G231000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEI4"/>
    <dbReference type="SMR" id="V7CEI4"/>
    <dbReference type="STRING" id="3885.V7CEI4"/>
    <dbReference type="Gramene" id="ESW27773">
        <property type="protein sequence ID" value="ESW27773"/>
        <property type="gene ID" value="PHAVU_003G231000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LFPDECA"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11452">
        <property type="entry name" value="bHLH_AtNAI1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052610">
        <property type="entry name" value="bHLH_transcription_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959:SF43">
        <property type="entry name" value="BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="198"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="165"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="237"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="68"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="165"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="200"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW27773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="42107" checksum="798E4F06A46C5BC0" modified="2014-02-19" version="1">MMEESNKPMDEASAPSWLSDLDMDDYNLFPDECAMNLNLFDDQEFLPQDIVNALEKQTQTLQQSLSSECPSKTVSNSSTDDASFDFERPAKLLKTTSSSCCNSDSSTITNNLSPKLSPSTSFSSFQSQILSFDNSNSSPPNNTTQFYGFDLNPTQNEMVSVSVPQPTKSRLPNQTPKWSSKNQNFETKPSSHAKRSPAHAQDHIMAERKRREKLSQSFIALAALVPGLKKMDKASVLGDAIKYVKDLKERLAVLEEQSKKTRGESVVVLNKPDLSGDDDSSSCDESIDADSVSDSLFELESRVSGKEMLLRIHCRKQKGLLVKLLAEIQRNNLFVINSSILPFGDSIIDITVVAQMGENYNLTTKGLVKNLRVAAHKIMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFN4</accession>
    <name>V7CFN4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G032600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the gamma-class carbonic anhydrase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFN4"/>
    <dbReference type="SMR" id="V7CFN4"/>
    <dbReference type="STRING" id="3885.V7CFN4"/>
    <dbReference type="Gramene" id="ESW28964">
        <property type="protein sequence ID" value="ESW28964"/>
        <property type="gene ID" value="PHAVU_002G032600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTES">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INRVEIM"/>
    <dbReference type="OrthoDB" id="25818at2759"/>
    <dbReference type="PhylomeDB" id="V7CFN4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031966">
        <property type="term" value="C:mitochondrial membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd04645">
        <property type="entry name" value="LbH_gamma_CA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.10">
        <property type="entry name" value="Hexapeptide repeat proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047324">
        <property type="entry name" value="LbH_gamma_CA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050484">
        <property type="entry name" value="Transf_Hexapept/Carb_Anhydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13061">
        <property type="entry name" value="DYNACTIN SUBUNIT P25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13061:SF55">
        <property type="entry name" value="GAMMA CARBONIC ANHYDRASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="Trimeric LpxA-like enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00034694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW28964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="270" mass="29225" checksum="51B3A5F6893EE1FB" modified="2014-02-19" version="1">MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYLFQEQLSRHRPLMNLFDKGPSVHKDAFVAPSASLLGDVHVGPASSIWYGCVLRGDVNGIVIGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHADENAKELEETEFVKVLHKKFAPRGEEYDSILGGGQETPAELNLQDNVLLDKAPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG30</accession>
    <name>V7CG30_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G276000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG30"/>
    <dbReference type="SMR" id="V7CG30"/>
    <dbReference type="STRING" id="3885.V7CG30"/>
    <dbReference type="Gramene" id="ESW28308">
        <property type="protein sequence ID" value="ESW28308"/>
        <property type="gene ID" value="PHAVU_003G276000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1273">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CWSKCGN"/>
    <dbReference type="OrthoDB" id="196858at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048188">
        <property type="term" value="C:Set1C/COMPASS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000649">
        <property type="entry name" value="Compass component swd1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001358">
        <property type="entry name" value="Retinoblastoma-binding-like protein E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037850">
        <property type="entry name" value="RBBP5/Swd1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44040">
        <property type="entry name" value="RETINOBLASTOMA-BINDING PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44040:SF1">
        <property type="entry name" value="RETINOBLASTOMA-BINDING PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="67"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="5">
        <location>
            <begin position="333"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="459"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="459"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="505"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="518"/>
            <end position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="550" mass="60966" checksum="DA4324F227D04ED3" modified="2014-02-19" version="1">MNAQIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAVGCNDGSCVIWDFETRGIAKELRDNDCSSPITSVCWSKCGNRILVSAADKSLSLWDVMSGKRITRIVLQQTPLHARLHPGSSKPSVCLACPLSCAPMIVDLNTGNTTSLKVSVLEISNNGATPASRNKCADGITSFSPTAACFSKNGNLVYVGNSKGEILIINYIDNEVRAMVPIPGGSVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKDEVRALDDLNENLNDLDGVEKLKAVGSKCLILFRELQDLITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRVGRLVKILEGPKEAIIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKESDVNEDDEVDIVTVEKDPGFSDSEMSEEELCFLPATPTCDAPEQMDKFIESSSKLVDSNNSGSPLSEEAGPNEHTMNHNSSPLEDDAWGTRTKRKRKPSEKVLELQAEKLKKPSKSSKPSKFKTKSLVDEDGSNGFYGDEFSDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGF7</accession>
    <name>V7CGF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G056600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGF7"/>
    <dbReference type="SMR" id="V7CGF7"/>
    <dbReference type="STRING" id="3885.V7CGF7"/>
    <dbReference type="Gramene" id="ESW29262">
        <property type="protein sequence ID" value="ESW29262"/>
        <property type="gene ID" value="PHAVU_002G056600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RANDNME"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209:SF590">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10209">
        <property type="entry name" value="OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00682">
        <property type="entry name" value="IPNSYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="5">
        <location>
            <begin position="39"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW29262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="20480" checksum="1EE425A400532BED" modified="2014-02-19" version="1">MESLYSKFFGVGKKVLSLIALSLNLDEDFFEKVGAIDKPAAFLRLLHYPGEMGPHQEICSAHTDFGTLTLLLTDGVQGLQICRNKLEEPQVWEDVPHMEGAFIVNIGDLMERWTNCLYRSTMHRVKQSGRERYSMAFFLDPHPECVVECLQSCCSESSPPRFAPIRSGEYLNERFKIQSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGP6</accession>
    <name>V7CGP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G058300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGP6"/>
    <dbReference type="SMR" id="V7CGP6"/>
    <dbReference type="STRING" id="3885.V7CGP6"/>
    <dbReference type="Gramene" id="ESW29294">
        <property type="protein sequence ID" value="ESW29294"/>
        <property type="gene ID" value="PHAVU_002G058300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXSI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHVWANF"/>
    <dbReference type="OrthoDB" id="72819at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17058">
        <property type="entry name" value="Ubl_SNRNP25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039690">
        <property type="entry name" value="SNRNP25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040610">
        <property type="entry name" value="SNRNP25_ubiquitin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14942">
        <property type="entry name" value="U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14942:SF0">
        <property type="entry name" value="U11_U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18036">
        <property type="entry name" value="Ubiquitin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="2">
        <location>
            <begin position="43"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="155" mass="17690" checksum="099A06C34D093F14" modified="2014-02-19" version="1">MKKARLNSLLTNLLDDPILSDVPKNPTLADVDTLISLELGSAMRISVLKLDGSTLDVAVMNSATVKDLKLVIKRKVNDMEQSGMGHRHISWKHVWANYCLSCHNNKLLDDNDALQNFGVRNNSQVQFVPFVMTKQSRRHSKRRKHRFFHGLNKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGU3</accession>
    <name>V7CGU3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G001100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGU3"/>
    <dbReference type="SMR" id="V7CGU3"/>
    <dbReference type="STRING" id="3885.V7CGU3"/>
    <dbReference type="Gramene" id="ESW28578">
        <property type="protein sequence ID" value="ESW28578"/>
        <property type="gene ID" value="PHAVU_002G001100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQBU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AIPMLGQ"/>
    <dbReference type="OrthoDB" id="1431068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36051">
        <property type="entry name" value="DYNAMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36051:SF2">
        <property type="entry name" value="DYNAMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="226"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="27097" checksum="338A44F29E2C7516" modified="2014-02-19" version="1">MDWKRFFKPKTDPQNPSTMPMLDKVMSITKGATDGISSVSQQANTSLRMLGTSSAQGAVGYGIGFGHGFGLGISMRAGVDTLQSGVVESMTKMSGLIPGLPFGQGALPLPETSKNAQLATKSADQISAGSMMQKATKSFDQISQESVMQLANKPVNQLSQGLVGSQPTKIGSAFDSKTKKVGLMQAENKLLQTVMKQQQLIDELTEENAKLCQILQVKDLKIPCTKLQPSSSDPNLQQFPSSEVNENGGSRPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH85</accession>
    <name>V7CH85_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G080500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH85"/>
    <dbReference type="STRING" id="3885.V7CH85"/>
    <dbReference type="Gramene" id="ESW29567">
        <property type="protein sequence ID" value="ESW29567"/>
        <property type="gene ID" value="PHAVU_002G080500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKMIGHE"/>
    <dbReference type="OrthoDB" id="1924068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040256">
        <property type="entry name" value="At4g02000-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31286:SF176">
        <property type="entry name" value="DUF4283 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31286">
        <property type="entry name" value="GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="128" mass="15041" checksum="A8378517904E0CA1" modified="2014-02-19" version="1">MKSTKTQVWVRIYNLPLEYWRPRAIFSIIRGRDTTLSLDDHAMRKNRGMFARVLMDIDLLSPLPDYLLVERPDFAFVAGVEYEWLPPFFFHCKMIGHELAKCRVIHDQGRVPGPQHKPSQKATSDERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHJ9</accession>
    <name>V7CHJ9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G084900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GDA1/CD39 NTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHJ9"/>
    <dbReference type="SMR" id="V7CHJ9"/>
    <dbReference type="STRING" id="3885.V7CHJ9"/>
    <dbReference type="Gramene" id="ESW29614">
        <property type="protein sequence ID" value="ESW29614"/>
        <property type="gene ID" value="PHAVU_002G084900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1386">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENPFHRH"/>
    <dbReference type="OrthoDB" id="6372431at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017110">
        <property type="term" value="F:nucleoside diphosphate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009134">
        <property type="term" value="P:nucleoside diphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.150">
        <property type="entry name" value="Exopolyphosphatase. Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000407">
        <property type="entry name" value="GDA1_CD39_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11782">
        <property type="entry name" value="ADENOSINE/GUANOSINE DIPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11782:SF3">
        <property type="entry name" value="APYRASE 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01150">
        <property type="entry name" value="GDA1_CD39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="487"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="223"/>
            <end position="227"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600407-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR600407-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="530" mass="58819" checksum="65198401F9A9C0B7" modified="2014-02-19" version="1">MRRSTARTPAGSNRNDEMDPIKTRSTNLFARNPKSAPSRSLSSVLLVILALSFLFLLSYYAFSPSESSFRYQIIVDGGSTGTRVHVFKYRSGVALQFGKEGLASMRVNPGLSAFAEDPDGAGGSVSELVEFAKGRIPRESWGETSIRLMATAGLRMLDAEVQERILESCRKVLRNSGFKFMDNWASVITGSDEGVYAWVVANYALGTLGGDPLDTTGIVELGGASAQVTFVSREPVLPSFSRTIKFGNITYNLYSHSFLHFGLNAAHDSWKEALGAFNLASQSVQERLQIDPCTPTGYSYNAESLKFPPSSVSGKTHYHSTVQTRGNFSECRSAALMMLQKGKESCSHQHCDLGSTFIPNLQGKFLATENFYHTSKFFGLRPRAYLSKLMTAGKEFCGEDWSWLKEKYVSHKEEDLLRYCFSSAYIVALLHDSLGIALDDERVKVANQVGSIPLDWALGAFIMQTTADADIQNHNWIATIFSDESPTLLSIIGFFLVLLTAWSISRWRKPQLKTIYDLEKGRYIITRIGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIQ2</accession>
    <name>V7CIQ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G123100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIQ2"/>
    <dbReference type="Gramene" id="ESW30082">
        <property type="protein sequence ID" value="ESW30082"/>
        <property type="gene ID" value="PHAVU_002G123100g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10500476at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="60" mass="6720" checksum="2247993464B154C6" modified="2014-02-19" version="1">MALLQSGTCFCAKWWSGCRRRIGSRLASTESEAAVKVCVVIRCSDLISQILLPVNLFHFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLI8</accession>
    <name>V7CLI8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G095600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLI8"/>
    <dbReference type="STRING" id="3885.V7CLI8"/>
    <dbReference type="Gramene" id="ESW29746">
        <property type="protein sequence ID" value="ESW29746"/>
        <property type="gene ID" value="PHAVU_002G095600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS6G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLPEYIM"/>
    <dbReference type="OrthoDB" id="20368at2759"/>
    <dbReference type="PhylomeDB" id="V7CLI8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11299">
        <property type="entry name" value="O-FucT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024709">
        <property type="entry name" value="FucosylTrfase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31288">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31288:SF10">
        <property type="entry name" value="PROTEIN ESMERALDA 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009360">
        <property type="entry name" value="UCP009360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="25"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="563" mass="63731" checksum="1763A32768220FDB" modified="2014-02-19" version="1">MHPYNRLPSSGHSTPSPPPSPLRSPRLRHGRSKTGRFSPNRGSGRTAAQRLSWMFLSVLLRRQGVFLFAPLIYISGMLLYMGTASFDVVPVIKHRPAPGSVYRSPQLYAKVHLEMDSDNSSADAISTIWKTPYKGGEWNPCLNRSCEGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFRDIYDEDFFLNVLKNDVRVVDKIPEYLMERFGSNMTNVHNFRIKAWSSIQYYRDVVLPKLLEEKVIRISPFANRLSFDAPPVVQRLRCLANYEALRFSSPILSIGESLVERMRKHSAINGGKYVSVHLRFEEDMVAFSCCVFDGGKQEREDMIAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFTKNTSIFLASGKIYNAEKTMAPLLQMFPNLHTKETLAAEEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHAKTIRPDKRKLALLFDNPNIGWKSLKRQLLSMRWHSDSKGVELKRPNDSIYSFPCPDCMCRANRTDDSRSASAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLJ1</accession>
    <name>V7CLJ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G132500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MYB-CC family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLJ1"/>
    <dbReference type="SMR" id="V7CLJ1"/>
    <dbReference type="STRING" id="3885.V7CLJ1"/>
    <dbReference type="Gramene" id="ESW30193">
        <property type="protein sequence ID" value="ESW30193"/>
        <property type="gene ID" value="PHAVU_002G132500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RIH2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEPRCFR"/>
    <dbReference type="OrthoDB" id="551907at2759"/>
    <dbReference type="PhylomeDB" id="V7CLJ1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000762">
        <property type="term" value="P:regulation of phenylpropanoid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025756">
        <property type="entry name" value="Myb_CC_LHEQLE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046955">
        <property type="entry name" value="PHR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31499">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR PHL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31499:SF23">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR PHL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14379">
        <property type="entry name" value="Myb_CC_LHEQLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="18"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW30193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="30403" checksum="35E2A01B5E6E1349" modified="2014-02-19" version="1">MEGGGRESYNGVVMTMTRDPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSNRSSGPNTSYRGDNEGGEIPIAEALRHQIEVQKRLEDQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSLEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSDFHYEEVGREQNRDQKPKIEGGSIEFDLNIKGSNDLVSAGGAEMDVNMISYRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLQ8</accession>
    <name>V7CLQ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidase C14 caspase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G2099002g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C14B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLQ8"/>
    <dbReference type="STRING" id="3885.V7CLQ8"/>
    <dbReference type="Gramene" id="ESW31109">
        <property type="protein sequence ID" value="ESW31109"/>
        <property type="gene ID" value="PHAVU_002G2099002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1546">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DANQQGC"/>
    <dbReference type="OrthoDB" id="3223806at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12660">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029030">
        <property type="entry name" value="Caspase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050452">
        <property type="entry name" value="Metacaspase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011600">
        <property type="entry name" value="Pept_C14_caspase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48104:SF2">
        <property type="entry name" value="METACASPASE-1-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48104">
        <property type="entry name" value="METACASPASE-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00656">
        <property type="entry name" value="Peptidase_C14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52129">
        <property type="entry name" value="Caspase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase C14 caspase" evidence="3">
        <location>
            <begin position="31"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="8"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="285" mass="32264" checksum="9E5325FF1150F49D" modified="2014-02-19" version="1" fragment="single">GSNKNENLLSASLSHSMPSSSAFPSTGRYNKRAVLCGVSYRKKFRLRGIINDIRNMKELLIKNFDFPNECIRILTEHEQNANLIPTKHNIMESLRWLVKDCEPGDSLVFYFSGHGSQQPDFKEDEIDGFDETLCPVDYLIEGMIIDNEINSTIVWPLKKGVTLHAIVDACHSGTILDLLFVYNQESGMWEDNKPPSKEPIRKHSSGGLAICLSACEDNQTASDSSVFGKGMNGVLTYLFTKTIREYPGITYGRLLQNMHEEIKKINRSRCNNLICQPIFNRKIPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM69</accession>
    <name>V7CM69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF659 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G2258002g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM69"/>
    <dbReference type="STRING" id="3885.V7CM69"/>
    <dbReference type="Gramene" id="ESW31287">
        <property type="protein sequence ID" value="ESW31287"/>
        <property type="gene ID" value="PHAVU_002G2258002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUNQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSTEWER"/>
    <dbReference type="OrthoDB" id="1729094at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF122">
        <property type="entry name" value="OS09G0499600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF659" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="184" mass="21027" checksum="82D16D6A68013FD6" modified="2014-02-19" version="1" fragment="single">VGEEDVIQIVTDNAANYKAAGELLMQKRKKLYWTPYFEKKIPLHHDTIANGKKITTYIYSRTDLISLLHKYSEGKDLIRPANTRFATSYLTLGCLNDNRGSLIKMFTSSEWQSSQFAKTRDGGLVENLIMDKGFWKSILNCLRGALPLIKVLRMVDSDEKPAMGFIYEEMDRAKEKIQNLLNGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMA1</accession>
    <name>V7CMA1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G149200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMA1"/>
    <dbReference type="STRING" id="3885.V7CMA1"/>
    <dbReference type="Gramene" id="ESW30385">
        <property type="protein sequence ID" value="ESW30385"/>
        <property type="gene ID" value="PHAVU_002G149200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SF2J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEPASDI"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755948" evidence="2">
        <location>
            <begin position="22"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="78"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="94"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="144" mass="13359" checksum="3512CEE163A7FFB0" modified="2014-02-19" version="1">MGSSAVQLFLILGLLATSCIAQAPGGAPTQPPTTTPPPPPAAAPVPAPTAPATPPPSSPPPAPTPAPTPTAPTPAPASSPSSAASPSAESPGSPTSPPAPPAPSSAPSPSVSEPPPSPSSAFSVGKAFVAGSALAGTFVAMVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN06</accession>
    <name>V7CN06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G177200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN06"/>
    <dbReference type="SMR" id="V7CN06"/>
    <dbReference type="STRING" id="3885.V7CN06"/>
    <dbReference type="Gramene" id="ESW30723">
        <property type="protein sequence ID" value="ESW30723"/>
        <property type="gene ID" value="PHAVU_002G177200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSBF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QGMISYR"/>
    <dbReference type="OrthoDB" id="1111193at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000146">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase IOS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF19">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-0675">Receptor</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 16" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="16">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755917" description="Protein kinase domain-containing protein" evidence="16">
        <location>
            <begin position="21"/>
            <end position="935"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="528"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="607"/>
            <end position="881"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="887"/>
            <end position="913"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="892"/>
            <end position="907"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="635"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW30723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="935" mass="104301" checksum="C9CFC2117C131524" modified="2014-02-19" version="1">MGLPSLLLVLTPLLTSLAISQPEEFVSIDCGGSSNYTDNSTGLAWISDSGIMELGISVKVESPNGSMVQYQKRRDFPIDTKKYCYTLRTEERRRYLVRATFQYGSLESGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERIATTKNIDVETREYPPVKVMQTAVVGRKGVLSYRLNLEDFPANARAYAYFAEIEDLNKNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVEIAAKTDKQDSTVVNAFRLLSSESSKTNEGDPCVPTPWEWVNCSTTTPPRITKIIMSRRNVKGEIPPELSNMEALTELWLDGNLLTGPLPDMSKLINLKIVHLENNKLSGRLSSYLGSLPSLQALFIQNNSFSGEIPAGLVSEKIIFDFEGNPGLYRGNKKHFKMVVGISIGVLVILLILFLVSLVLLLNTRRKASQKKREEKGISGRTNSKPLTGYSFLRGGSLMDENTTCHITLSELQEATENFSKKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCHGNQQFVTEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHDSSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMKAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSAEDYGAEMNIVHWARSLTRKGDAMSIIDPSLNGNAKTESIWRVVEIAMQCVEHHGASRPKMQEIILAIQDALKIEKGTENKLKSPSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNGCLPSAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPX2</accession>
    <name>V7CPX2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TOD1/MUCI70 glycosyltransferase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G236800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPX2"/>
    <dbReference type="STRING" id="3885.V7CPX2"/>
    <dbReference type="Gramene" id="ESW31413">
        <property type="protein sequence ID" value="ESW31413"/>
        <property type="gene ID" value="PHAVU_002G236800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUAS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1905162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006852">
        <property type="entry name" value="TOD1_MUCI70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048354">
        <property type="entry name" value="TOD1_MUCI70_glycTrfase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12956">
        <property type="entry name" value="ALKALINE CERAMIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12956:SF22">
        <property type="entry name" value="OS06G0724300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04765">
        <property type="entry name" value="TOD1_MUCI70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="TOD1/MUCI70 glycosyltransferase-like" evidence="3">
        <location>
            <begin position="151"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="512" mass="59021" checksum="20E706747163EEB2" modified="2014-02-19" version="1">MGDDNLKRETDMEDDLQRSRSLRLSRRGDRSNQNPAKDVDVTLFSSGRVSQDYPTKIVWKKGFVRLVLVVGILWMLLILLALLFHIWSCQTSVSFLSAMCNKDSKVYTMLDTMGLVSKDSNPHRCPIPLSNDPDKIDIPTGRTPNEIVKNLSYIMKDEIPSNRDQSSPLFGGHPSWKQREESFKLKSNMKVHCGFIRGGGAEMELVDIKYVKKCKFVVASGIFDGYDLPHEPSNISFSSKKLFCFLMVVDEVSLKFMRKNGTVKEDSAGGKWVGIWRIILLKNPPYDEPRRNGKVPKILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDLHMKIYYYEGMKPWSSNKKTISDVPEGAIIIREHTAMSNLFSCLWFNEVHLFTPRDQLSFGYTAFRLGDSFKYFMFPNCEYNSLFVLHPHTREHSSPIEWVKDLNKLKNSKLRESRGGLGLFTPYPGDLDSVVLPNVTRTSKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQD8</accession>
    <name>V7CQD8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G240500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQD8"/>
    <dbReference type="Gramene" id="ESW31470">
        <property type="protein sequence ID" value="ESW31470"/>
        <property type="gene ID" value="PHAVU_002G240500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAUB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFACTHH"/>
    <dbReference type="OrthoDB" id="1725654at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="21442" checksum="2CFC9E6BDF294C8B" modified="2014-02-19" version="1">MLHALGPVHISAHTVVMDGSRVAQTLDSLWFYTNIFACTHHPVAPFIDHIAASIHAKESPERDLQKPFTPLPLNQQDEPRNVETLTPRCHKFGGISAEVGTVAPSRERNKREKRKRRKWNKLGSSNVVDGRVDLWFDKLEEESYKQHEMLDVQQQSKMPPLDDAVAMKKHLKSWAYAVAVSALSDEITL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQK8</accession>
    <name>V7CQK8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_002G326800g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.22"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10216"/>
            <dbReference type="Rhea" id="RHEA-COMP:11321"/>
            <dbReference type="Rhea" id="RHEA-COMP:11322"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43176"/>
            <dbReference type="ChEBI" id="CHEBI:68546"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQK8"/>
    <dbReference type="SMR" id="V7CQK8"/>
    <dbReference type="STRING" id="3885.V7CQK8"/>
    <dbReference type="Gramene" id="ESW32492">
        <property type="protein sequence ID" value="ESW32492"/>
        <property type="gene ID" value="PHAVU_002G326800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0659">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1732493at2759"/>
    <dbReference type="PhylomeDB" id="V7CQK8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070985">
        <property type="term" value="C:transcription factor TFIIK complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004693">
        <property type="term" value="F:cyclin-dependent protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008353">
        <property type="term" value="F:RNA polymerase II CTD heptapeptide repeat kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045944">
        <property type="term" value="P:positive regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd07841">
        <property type="entry name" value="STKc_CDK7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000289">
        <property type="entry name" value="Cyclin-dependent kinase D-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000097">
        <property type="entry name" value="Putative cyclin-dependent kinase 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050108">
        <property type="entry name" value="CDK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037770">
        <property type="entry name" value="CDK7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056">
        <property type="entry name" value="CELL DIVISION PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24056:SF554">
        <property type="entry name" value="CYCLIN-DEPENDENT KINASE D-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 14" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="14"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="295"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="302"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="20"/>
            <end position="28"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00049280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR637770-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR637770-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW32492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="43419" checksum="551E26FA3255BFB9" modified="2014-02-19" version="1">MAGSDPSKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIVELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADTKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARMFGSPDRRFTHQVFARWYRAPELLFGAKQYGSGVDVWALGCIFAELLLRRPFLQGTSDIDQLGKIFLAFGTPTSSQWPDMVFLPDYVEYQYVPAPPLRSLFPMATDDALDLLSKMFTYDPKARISLQQALEHRYFSSAPLPSDPDKLPRPAPKKESKASDFNLQEGPTVLSPPRKSRRVMPGRDGFEGNSQQADKVDGSFGDFRQTTDDNSGKNESAPMSVDFSIFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQR3</accession>
    <name>V7CQR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G251900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60212"/>
            <dbReference type="Rhea" id="RHEA-COMP:15537"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="14">
            <dbReference type="Rhea" id="RHEA:60213"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6)-methyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60216"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="Rhea" id="RHEA-COMP:15543"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="12">
            <dbReference type="Rhea" id="RHEA:60217"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>N(6)-methyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60220"/>
            <dbReference type="Rhea" id="RHEA-COMP:15543"/>
            <dbReference type="Rhea" id="RHEA-COMP:15547"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="13">
            <dbReference type="Rhea" id="RHEA:60221"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the JARID1 histone demethylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQR3"/>
    <dbReference type="SMR" id="V7CQR3"/>
    <dbReference type="STRING" id="3885.V7CQR3"/>
    <dbReference type="Gramene" id="ESW31605">
        <property type="protein sequence ID" value="ESW31605"/>
        <property type="gene ID" value="PHAVU_002G251900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFSCLKH"/>
    <dbReference type="OrthoDB" id="1678912at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034647">
        <property type="term" value="F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048589">
        <property type="term" value="P:developmental growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051093">
        <property type="term" value="P:negative regulation of developmental process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045814">
        <property type="term" value="P:negative regulation of gene expression, epigenetic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.360:FF:000005">
        <property type="entry name" value="Putative lysine-specific demethylase JMJ16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003349">
        <property type="entry name" value="JmjN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004198">
        <property type="entry name" value="Znf_C5HC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694:SF144">
        <property type="entry name" value="DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02373">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02375">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02928">
        <property type="entry name" value="zf-C5HC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00542">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00541">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00545">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51183">
        <property type="entry name" value="JMJN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="6" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0804">Transcription</keyword>
    <keyword evidence="9" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="JmjN" evidence="16">
        <location>
            <begin position="78"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="JmjC" evidence="17">
        <location>
            <begin position="286"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="140"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="15">
        <location>
            <begin position="149"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00050619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00050935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00051640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW31605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="20">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1071" mass="121125" checksum="329E45A7CEB21009" modified="2014-02-19" version="1">MVSVLVSGTLSYSIGLILHFAWNETVEIGCRISRIEDNLLRHKPEMDITFESSASPQHKKISARWDPVEACRPTIDEAPVFYPTIEEFEDTLGYIAKIRPQAEPYGICRIVPPACWVPPCPLKEKDLWENAKFPTRIQQIDLLQNREPMRKKSRGRKRKRRKQSKMGTGRRTAKSGSEANGASEPEEKFGFQSGSDFTLKDFQQYAKVFKDCYFGLNDSNEYGKVSDYNHWQRWEPSVEDIEGEYWRIIEQPTNEVEVYYGADLETGSLGSGFPKTSSLTKNDSDRYAVSGWNLNNFPRLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGTHAPGLEDAMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVHRTVQNSGEFVITFPRAYHCGFNCGFNCAEAVNVAPVDWLVHGQNAVELYSLQCRKTSLSHDKLLFGCAQEAVSALAGLTLNEKENLKYIKWSSACGKDGVLTKAIKTRITMEKERLECLPTHLKKLRMDSEFDLFEERECFSCFYDLHLSAVGCKCSPDSYSCLKHSHLFCSCEMDESFVLFRYTMNELSTLVEALEGEAHAIEVWANRNTGLVSVNAEDACIYKQDAESYKGWKSSRYCAGTNDKSNSNIPSSSYSHISAELVHSEFHLETYSAPYGTKDCKKDIGNEKKLVMDNKVKEGSLDLNIDVMFVEPENHFLHAAEYHHNKSVPYVGEVCYSEVKKKQDKMKPGAGCIASLEKEFSSCSRDVQNSCTLDGYKLFGVDLQMHSDSREQLNGVFKIGVVETSNTSVSLTNQNFLMQKIIVSVEPVNLGIVMCGKLWCSKHAIYPKGFKSRVKFLSILDPPRICNYVSEVFDAGFLGPLFKVSMEERPSEAFTNTSADKCWESVLERLNHETKKLRNQGEREPPPLELLQSINGHKMFGFLSPSIIQAIEALDPNHQCVEYWNHKEVVSESSDSGIDDCKLSHGSSNSLSDVKTRLLGPGLRKLEQDSSRRHCDSFEEMKLVLEGLLKKASAEELSAMHKLFSSDAQFTKWREAFVTLIEEIQKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRW8</accession>
    <name>V7CRW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">serine C-palmitoyltransferase</fullName>
            <ecNumber evidence="6">2.3.1.50</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G024100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-serine + hexadecanoyl-CoA + H(+) = 3-oxosphinganine + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:14761"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:58299"/>
            <dbReference type="EC" id="2.3.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism; sphingolipid metabolism.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Sphingolipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.50" evidence="6"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRW8"/>
    <dbReference type="SMR" id="V7CRW8"/>
    <dbReference type="STRING" id="3885.V7CRW8"/>
    <dbReference type="Gramene" id="ESW32869">
        <property type="protein sequence ID" value="ESW32869"/>
        <property type="gene ID" value="PHAVU_001G024100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1358">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LTKYGCG"/>
    <dbReference type="OrthoDB" id="3168162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004758">
        <property type="term" value="F:serine C-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046513">
        <property type="term" value="P:ceramide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046512">
        <property type="term" value="P:sphingosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000049">
        <property type="entry name" value="serine palmitoyltransferase 1 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050087">
        <property type="entry name" value="AON_synthase_class-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693">
        <property type="entry name" value="CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13693:SF2">
        <property type="entry name" value="SERINE PALMITOYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0746">Sphingolipid metabolism</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="14">
        <location>
            <begin position="125"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW32869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="54198" checksum="146CE720D12EFBF6" modified="2014-02-19" version="1">MSASERFLANSMETVMGSAVVNFVNTTLNWVMFALDAPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNKELHYEPPVLESAAGPHTVIKGKEVINFASANYLGFIGHPKLLDSCSSSLAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLENITVKYKRTKNLRRYIVVEAVYQNSGQIVPLDEIVKLKEKYRFRVLLDESNSLGVLGSSGRGLTEHCGVPVEKIDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAIAAIDILEENPTLITKLKNNISLLRKELSKISGITIASNPESPIVYLRLEKSTGSVKDDLRLLENIAERVLKEESVFVVVSKRSTLDKCRLPVGIRLFVSAGHSESDVLKASESLKRVTASVLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT29</accession>
    <name>V7CT29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ras-related protein RABA6a</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G329200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the small GTPase superfamily. Rab family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT29"/>
    <dbReference type="SMR" id="V7CT29"/>
    <dbReference type="STRING" id="3885.V7CT29"/>
    <dbReference type="Gramene" id="ESW32523">
        <property type="protein sequence ID" value="ESW32523"/>
        <property type="gene ID" value="PHAVU_002G329200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DTFDEEC"/>
    <dbReference type="OrthoDB" id="9989112at2759"/>
    <dbReference type="PhylomeDB" id="V7CT29"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01868">
        <property type="entry name" value="Rab11_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000274">
        <property type="entry name" value="ras-related protein RABA5a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050209">
        <property type="entry name" value="Rab_GTPases_membrane_traffic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001806">
        <property type="entry name" value="Small_GTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47979">
        <property type="entry name" value="DRAB11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00071">
        <property type="entry name" value="Ras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00449">
        <property type="entry name" value="RASTRNSFRMNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00175">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00176">
        <property type="entry name" value="RAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00173">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00174">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51419">
        <property type="entry name" value="RAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51421">
        <property type="entry name" value="RAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51420">
        <property type="entry name" value="RHO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="217" mass="24591" checksum="7BFAAF1F24FB8FDC" modified="2014-02-19" version="1">MADTFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTAGQERFRAITSSYYRGASGAVLVYDITMRSSYENVRKWLLELREFGGEDMVIVLVGNKCDLDQSREVEKEEGKGYAETEGLCFMETSALKNLNVEQVFLQMITRIYEMTRQKNLAAKMEDKPINLLNGKEIHVTDEVTATKQASSCCSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXX2</accession>
    <name>V7CXX2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Chloride channel protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_001G094700g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 14">Membrane</location>
            <topology evidence="1 14">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the chloride channel (TC 2.A.49) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXX2"/>
    <dbReference type="SMR" id="V7CXX2"/>
    <dbReference type="STRING" id="3885.V7CXX2"/>
    <dbReference type="Gramene" id="ESW33736">
        <property type="protein sequence ID" value="ESW33736"/>
        <property type="gene ID" value="PHAVU_001G094700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0474">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="428525at2759"/>
    <dbReference type="PhylomeDB" id="V7CXX2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034707">
        <property type="term" value="C:chloride channel complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009705">
        <property type="term" value="C:plant-type vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009671">
        <property type="term" value="F:nitrate:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005247">
        <property type="term" value="F:voltage-gated chloride channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04591">
        <property type="entry name" value="CBS_pair_voltage-gated_CLC_euk_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03685">
        <property type="entry name" value="ClC_6_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3080.10:FF:000004">
        <property type="entry name" value="Chloride channel ClC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3080.10">
        <property type="entry name" value="Clc chloride channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051280">
        <property type="entry name" value="Cl-channel/antiporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014743">
        <property type="entry name" value="Cl-channel_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002251">
        <property type="entry name" value="Cl_channel_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001807">
        <property type="entry name" value="ClC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11689">
        <property type="entry name" value="CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11689:SF67">
        <property type="entry name" value="CHLORIDE CHANNEL PROTEIN CLC-A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00654">
        <property type="entry name" value="Voltage_CLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00762">
        <property type="entry name" value="CLCHANNEL"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01120">
        <property type="entry name" value="CLCHANNELPLT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81340">
        <property type="entry name" value="Clc chloride channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13" id="KW-0129">CBS domain</keyword>
    <keyword evidence="12 14" id="KW-0868">Chloride</keyword>
    <keyword evidence="11" id="KW-0869">Chloride channel</keyword>
    <keyword evidence="6" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8 14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <keyword evidence="6" id="KW-0851">Voltage-gated channel</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="285"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="332"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="374"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="463"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="546"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="16">
        <location>
            <begin position="718"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU361221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW33736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="791" mass="87464" checksum="52E7E21001E8DA3F" modified="2014-02-19" version="1">MGEDSREFGESTKINHKMEEVQREEEIDPEGNPLNEPLLKRNRTLSSNPLALVGEKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWLLAFLVGLLTGIIATLINLAVENISGYKLLAVLSYIHKERYLTGFLYFTGMNFILTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIELCHSGKCGLFGEGGLIMFDVSNVTVRYHFMDIVIVVVIGIIGGILGSLYNHLLHKILRLYNLINQKGKIHKLLLSLAVALFTSVCQYGLPFLGKCTPCDSSIRESACPTNGRSGNFKQFNCPPGFYNDLATLLLTTNDDAVRNIFSTNTPQEYQPLSLLIFFVLYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGIYMGSSTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGELVDVKPSVVTLHGIEKVAKIVDVLKNTTHNGFPVMDDGVVVPPVVGQANGATELHGLVLRAHLIQALKKKWFFKERRRTEDWEVRQKFTWVELAEREGSIEGVAVTSEEMEMFVDLHPLTNTTPFTVLESMSVAKAMILFRQVGLRHLLVVPKYQASGVSPVIGILTRQDLLAHNISTVFPHLAKSKSRGKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYF7</accession>
    <name>V7CYF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF6821 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G111500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYF7"/>
    <dbReference type="STRING" id="3885.V7CYF7"/>
    <dbReference type="Gramene" id="ESW33946">
        <property type="protein sequence ID" value="ESW33946"/>
        <property type="gene ID" value="PHAVU_001G111500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYG5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RITCGGF"/>
    <dbReference type="OrthoDB" id="766965at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045883">
        <property type="entry name" value="At4g13530-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049224">
        <property type="entry name" value="DUF6821"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33646:SF2">
        <property type="entry name" value="F20H23.8 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33646">
        <property type="entry name" value="GB|AAF00631.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20705">
        <property type="entry name" value="DUF6821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6821" evidence="2">
        <location>
            <begin position="135"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW33946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="284" mass="31856" checksum="BB014769B6218055" modified="2014-02-19" version="1">MDTNDWVVLSDDSVVDVNEDCGEKHMFLGKRNMDSKSTFDVDDYYFCTSPKFKKTSEASRNFHPRVPKELLHIPIQLESRTGKVPDEGLVEETTKDQVEATLVPSSPITTEKIKGVVLEANQDTVPQLISKIREIESPKSVGRGLFLSSDIGAFKFEEIGSEAHEIMVSPRMKIDRDMSNMDSGKEVEDSGDGFNFWKWSFNGVGAICSFGVAAATICVLFFGSHQRIKFHQDQKIRFQIYTDDKRIKQMVQHATKLNEAALSAMNGVHLSRARITCGGFYDGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZA3</accession>
    <name>V7CZA3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G174100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZA3"/>
    <dbReference type="STRING" id="3885.V7CZA3"/>
    <dbReference type="Gramene" id="ESW34708">
        <property type="protein sequence ID" value="ESW34708"/>
        <property type="gene ID" value="PHAVU_001G174100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1NY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSWRNQK"/>
    <dbReference type="OrthoDB" id="1914651at2759"/>
    <dbReference type="PhylomeDB" id="V7CZA3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36043">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36043:SF1">
        <property type="entry name" value="2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="120"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="16365" checksum="A697D242186EAD33" modified="2014-02-19" version="1">MQMDVYTHLSSPPFISHRFCSSRYHHSSSSSSSHPPFKLLCSKESQPKDDNNNKGDKSSRDWDKAWSKFKNQGGKKAFSKFSDKYVSWNPRRSEFPLSEEVDPIKRTERSNLEFWNSPTFTLGGAIIIVTFLLLYTILAPIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3NZZ2</accession>
    <name>A0ACC3NZZ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L009001</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967796">
        <property type="protein sequence ID" value="KAK6645811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="499" mass="54226" checksum="B69814A77C09021F" modified="2026-01-28" version="1">MEGNAKSDQIVDVGSVVEAVSADDGDAPLYSLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYTLKIPSGEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRATDELQALQEERKKVAPETAGAIDQFLVKLRACATGESCITFILDDPVGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSAQAEGTHVDAPGGGEAVTTDQVRREPHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAASCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEDYERSWEQNEELGLNDMDTSSAEVGDAPTNTSKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1V8</accession>
    <name>A0ACC3P1V8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L011043</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="421" mass="46246" checksum="D49025C8D5D7230D" modified="2026-01-28" version="1">MGAAANGDGAPSPPLFVSVAALSASRRRLSASFVERSRPVSSEKPTAWLSLQGRLLNADEASSARTIGGGLSAELALAWNLFPPIQRFLVVAVIGAAAARSRKDLRICHLNKSVELRDQVLSSMQQKLDTLCELVNNSKEYSTTAMENSCDKDGELQLNETFGIEKVKLVDCGCWHCEQHSASVNEGASVARNSGANEVLQYKTPFPNEDQEERRMSDMSDWASSVTSSADIQLNNLAVEQDIYNLRKDCEEKDTTIKELMTLLNSNEVANCKRIAELEDIIRRKNTTISKLKKDMSVLEQKVVQLTRLRRPSFSASGSNDSQLPRIMIDNLLYDMESTTSSSSSDSDSSSVFKEPDLPAHIVLKQNSASKIDQKHTPAKVSSSSASSSVQKQLSARGDLKKSRRRSLNGDKSTTAQKRWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFR1</accession>
    <name>V7AFR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_011G0308000g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
            <location evidence="1">Microtubule organizing center</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFR1"/>
    <dbReference type="STRING" id="3885.V7AFR1"/>
    <dbReference type="Gramene" id="ESW03648">
        <property type="protein sequence ID" value="ESW03648"/>
        <property type="gene ID" value="PHAVU_011G0308000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="8693905at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005815">
        <property type="term" value="C:microtubule organizing center"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06627">
        <property type="entry name" value="STKc_Cdc7_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000372">
        <property type="entry name" value="MAP3K epsilon protein kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053235">
        <property type="entry name" value="Ser_Thr_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24361">
        <property type="entry name" value="MITOGEN-ACTIVATED KINASE KINASE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24361:SF433">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00109">
        <property type="entry name" value="TYRKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="20"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="314"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="394"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="434"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="514"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="355"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="447"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="767"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW03648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="767" mass="84401" checksum="7F7B725406E002A2" modified="2014-02-19" version="1" fragment="single">MSRQALNTAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMMGMRRGNKVSICCGGRARHTGWQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVALYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDSRQRPDAKTLLSHPWIQNFRRVLQSSLRHSGTLRNIEEDDSADAEVSGGYHKSAYEGSSVEKEDSSKELSSGAVHDSKSHEDNASVPNERTEKADHVPSDQVLTLAIREKSFLQTGSSKLSPNREVGNSEPTGDHEISNAKDLHEVMMNGEVGSPKSKVMASKTGGKDSSVNNGNKSFAFGPRGQDNGSLKAMKMPTTVEGNELSRFSDPPGDAYLDDLFHALDKQPGEVAAEASTSTSTSHMVKGNTSRIDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFNQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYSCIVRFAQRIVESRNETILYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG44</accession>
    <name>V7AG44_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF4408 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G043200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AG44"/>
    <dbReference type="STRING" id="3885.V7AG44"/>
    <dbReference type="Gramene" id="ESW03803">
        <property type="protein sequence ID" value="ESW03803"/>
        <property type="gene ID" value="PHAVU_011G043200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0WV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GYRRCET"/>
    <dbReference type="OrthoDB" id="1095087at2759"/>
    <dbReference type="PhylomeDB" id="V7AG44"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33640:SF32">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33640">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="209" mass="24403" checksum="382F90EAE0A6EA55" modified="2014-02-19" version="1">MDSFSFNNLQAEKANAILKHRKLRRVASLLRIIEVCAVLVLVSRFSMQLPVAVRNSGEYFRDLSLFMNSPRFVFLIGNIIIIALFAQFSAQGNNVVQEPNLYQELIQNTTKNQETVVAEYSRKKQRMKTGEAKISLEKGYRRCEREKRRGVMRRCESESEKGRKKIEGVAVEEVARPEDGMSNEEFRRTVEAFIAREQRIRREEDYYLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGD8</accession>
    <name>V7AGD8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G087400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGD8"/>
    <dbReference type="SMR" id="V7AGD8"/>
    <dbReference type="Gramene" id="ESW04345">
        <property type="protein sequence ID" value="ESW04345"/>
        <property type="gene ID" value="PHAVU_011G087400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053238">
        <property type="entry name" value="RING-H2_zinc_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155:SF610">
        <property type="entry name" value="OS01G0755700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155">
        <property type="entry name" value="RING FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="31"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="139"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="251"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="291" mass="32534" checksum="1D852AE387D37109" modified="2014-02-19" version="1">MPHLPHASHATNASSPQVSLRSPLEVSIRPMFISSVAYIFLILFVAFFFIGFVFLYFQKHSSSWKSESRAIHKCVSSNFVASKSLMVVAETALQGELLLLNKNVPMSTSMPPLPHTNHATNASSSQVSLGSLLEVFIRLMFISTVTYVFLILFAAFFFIGFVFLYFQKHSSSWDSESRTIRERVSSNSMASKSLAVVAETASVAYVFVILFTAFFFIGFVFLYFQKHFSSLDFEPGAIRDGGSGDNNQGECTICLEEVGKGEVMKMIVYCRHVFHADCINRLLEKQVTCPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGP5</accession>
    <name>V7AGP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">NADH:quinone oxidoreductase/Mrp antiporter membrane subunit domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G095700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the complex I subunit 4L family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGP5"/>
    <dbReference type="SMR" id="V7AGP5"/>
    <dbReference type="STRING" id="3885.V7AGP5"/>
    <dbReference type="Gramene" id="ESW04450">
        <property type="protein sequence ID" value="ESW04450"/>
        <property type="gene ID" value="PHAVU_011G095700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4669">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEHELFP"/>
    <dbReference type="OrthoDB" id="1925110at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030964">
        <property type="term" value="C:NADH dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016651">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.3510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001133">
        <property type="entry name" value="NADH_UbQ_OxRdtase_chain4L/K"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11434:SF16">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11434">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="8" id="KW-0618">Plastoquinone</keyword>
    <keyword evidence="6" id="KW-0874">Quinone</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW04450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="80" mass="8954" checksum="FBBF0EE71F4E95A1" modified="2014-02-19" version="1" fragment="single">QEFVRPDYQEYLSNHALVLSAFLFSIGIYRLITSRNMVRALMYLELLLNAVNINLFKGNIFSIFVIAVAAAEAAFGPAIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGY5</accession>
    <name>V7AGY5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G1272000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGY5"/>
    <dbReference type="STRING" id="3885.V7AGY5"/>
    <dbReference type="Gramene" id="ESW04814">
        <property type="protein sequence ID" value="ESW04814"/>
        <property type="gene ID" value="PHAVU_011G1272000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1738285at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="35" mass="3840" checksum="26650C7043D38278" modified="2014-02-19" version="1" fragment="single">MSHKLWSMHSSLKLFGTTLDVATGQWIEYSSGIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHE4</accession>
    <name>V7AHE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Thionin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G081500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHE4"/>
    <dbReference type="Gramene" id="ESW04273">
        <property type="protein sequence ID" value="ESW04273"/>
        <property type="gene ID" value="PHAVU_011G081500g"/>
    </dbReference>
    <dbReference type="OMA" id="CELICAP"/>
    <dbReference type="OrthoDB" id="1431774at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753219" description="Thionin-like protein" evidence="1">
        <location>
            <begin position="17"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="106" mass="11317" checksum="4466A20FBD978F47" modified="2014-02-19" version="1">MKIVGVMIMMMILGQGDNSALCVEVVSNIQPAKLTCEQHCSISCILSNLAYPVCLVICIAKCPDPPTDCIRACGLNKSITINIDARGVVNNVVDSCLQKCKKTSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHS5</accession>
    <name>V7AHS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Bet v I/Major latex protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G153600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BetVI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHS5"/>
    <dbReference type="SMR" id="V7AHS5"/>
    <dbReference type="STRING" id="3885.V7AHS5"/>
    <dbReference type="Gramene" id="ESW05119">
        <property type="protein sequence ID" value="ESW05119"/>
        <property type="gene ID" value="PHAVU_011G153600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S34N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YQRERIT"/>
    <dbReference type="OrthoDB" id="1845342at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010427">
        <property type="term" value="F:abscisic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004864">
        <property type="term" value="F:protein phosphatase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0038023">
        <property type="term" value="F:signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07816">
        <property type="entry name" value="Bet_v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.530.20:FF:000087">
        <property type="entry name" value="Phytohormone-binding protein CSBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000916">
        <property type="entry name" value="Bet_v_I/MLP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024949">
        <property type="entry name" value="Bet_v_I_allergen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050279">
        <property type="entry name" value="Plant_def-hormone_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31213">
        <property type="entry name" value="OS08G0374000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31213:SF64">
        <property type="entry name" value="PHYTOHORMONE-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00407">
        <property type="entry name" value="Bet_v_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00634">
        <property type="entry name" value="BETALLERGEN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bet v I/Major latex protein" evidence="2">
        <location>
            <begin position="4"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="155" mass="17547" checksum="B2BFE9E38F88ED2F" modified="2014-02-19" version="1">MIKEFNTQTELSVRLEALWAVLSKDFITVAPKVLPHIVKDVQVIEGDGGVGTLLIFNFLPDVSPSYQREKITEFDEGSHEIGLEVIEGGYLSQGLSYYKTTFKLSAMEEEKTLVNVKISYDHESDIEEKVKPTKTSQSTLLYLRRLERYLLTGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIB0</accession>
    <name>V7AIB0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Terpene synthase metal-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G142900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIB0"/>
    <dbReference type="STRING" id="3885.V7AIB0"/>
    <dbReference type="Gramene" id="ESW04995">
        <property type="protein sequence ID" value="ESW04995"/>
        <property type="gene ID" value="PHAVU_011G142900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUCN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YIVRLMD"/>
    <dbReference type="OrthoDB" id="1877784at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010333">
        <property type="term" value="F:terpene synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050148">
        <property type="entry name" value="Terpene_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005630">
        <property type="entry name" value="Terpene_synthase_metal-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31225:SF221">
        <property type="entry name" value="(-)-GERMACRENE D SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31225">
        <property type="entry name" value="OS04G0344100 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03936">
        <property type="entry name" value="Terpene_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Terpene synthase metal-binding" evidence="4">
        <location>
            <begin position="106"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW04995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="34488" checksum="10D42220754C9A28" modified="2014-02-19" version="1">MQEECDSHIQQVKLLKEDVRKNLVSPIDHNNFSFKLNFIDSVQRLGVSYHFEHEINTLLCQIYDISTEDNNIIVHSDHLYQTALLFRLFREHGYRISSILLNFRNEKTNFINIKGKRMKRLVQAHMAKARRCHTNHIPKMEEYMEVRGISSAYPFLMTLSFLGMEDTTKEVLIWATNEPTIIVASTTIARIMDDIVGDEVEQQRKHVVSSIYCYMKQHKVSRKCAIEELQKLVEDAWKDINDACLAPTQVPTTFLMRAVNFARVIDVFYKDEDNYTNAGGIMKDHIESLLVKKISL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIZ2</accession>
    <name>V7AIZ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G190900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW05572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW05572"/>
        <property type="gene ID" value="PHAVU_011G190900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1669972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892:SF2">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED _ V-ATPASE-RELATED _ VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="45" mass="5118" checksum="0BFB7822B21DDC45" modified="2014-02-19" version="1">MDTLPQKINLISCESMIHISDIKLIRTDTTLDLSQKAEKGMICLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ47</accession>
    <name>V7AJ47_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G165200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
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            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ47"/>
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        <property type="protein sequence ID" value="ESW05260"/>
        <property type="gene ID" value="PHAVU_011G165200g"/>
    </dbReference>
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        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="81" mass="9684" checksum="C08CC4819ABCF696" modified="2014-02-19" version="1">MGKRKEERRERRELLGSNFTVLPFVCLSLPPKFFVPRVQSLQELVTWGFLLFLTLFVYLYHLSRRGNNLCMRFPSFIKVIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK12</accession>
    <name>V7AK12_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">Thioredoxin domain-containing protein</fullName>
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    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G157700g</name>
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    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7AK12"/>
    <dbReference type="STRING" id="3885.V7AK12"/>
    <dbReference type="Gramene" id="ESW05168">
        <property type="protein sequence ID" value="ESW05168"/>
        <property type="gene ID" value="PHAVU_011G157700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0910">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RICCAIP"/>
    <dbReference type="OrthoDB" id="2121326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008047">
        <property type="term" value="F:enzyme activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000001">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45663">
        <property type="entry name" value="GEO12009P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45663:SF36">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00421">
        <property type="entry name" value="THIOREDOXIN"/>
    </dbReference>
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        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="4" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="62"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="174" mass="18767" checksum="360F0D5FB4E0D7A8" modified="2014-02-19" version="1">MATLFDSLAVVRLPSAAISPVAARPTSAKLPQCIGLRLRPTAARFVAASAPRIATHAVRVVCKAQDTAVDVAPITDANWQSLVLESDSAVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIENFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL69</accession>
    <name>V7AL69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cathepsin propeptide inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G1328001g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL69"/>
    <dbReference type="STRING" id="3885.V7AL69"/>
    <dbReference type="Gramene" id="ESW04876">
        <property type="protein sequence ID" value="ESW04876"/>
        <property type="gene ID" value="PHAVU_011G1328001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWRDQNA"/>
    <dbReference type="OrthoDB" id="10253408at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008234">
        <property type="term" value="F:cysteine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.2250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013128">
        <property type="entry name" value="Peptidase_C1A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000668">
        <property type="entry name" value="Peptidase_C1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013201">
        <property type="entry name" value="Prot_inhib_I29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12411">
        <property type="entry name" value="CYSTEINE PROTEASE FAMILY C1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08246">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00112">
        <property type="entry name" value="Peptidase_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00848">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0788">Thiol protease</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5016649414" description="Cathepsin propeptide inhibitor domain-containing protein" evidence="5">
        <location>
            <begin position="28"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Cathepsin propeptide inhibitor" evidence="6">
        <location>
            <begin position="39"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="146" mass="17236" checksum="7CF27D71C7E04A45" modified="2014-02-19" version="1" fragment="single">MVTKIHLCHISLAMLFCMAFWALQVTSRTLQDASIYERHEEWMARYSRVYKDPQEKEKRFRIFKQNMNYIEAFNNAANKPYKLAINQFADLTNEEFIAPRNRFKGHMRSSIIKTTTFKYENVTSVPSTVDWRQKGAVTPVKDQGQC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALT8</accession>
    <name>V7ALT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NAD(P)H dehydrogenase (quinone)</fullName>
            <ecNumber evidence="3">1.6.5.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G152800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a quinone + NADH + H(+) = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + NADPH + H(+) = a quinol + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:46164"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the WrbA family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.2" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALT8"/>
    <dbReference type="SMR" id="V7ALT8"/>
    <dbReference type="STRING" id="3885.V7ALT8"/>
    <dbReference type="Gramene" id="ESW05111">
        <property type="protein sequence ID" value="ESW05111"/>
        <property type="gene ID" value="PHAVU_011G152800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3135">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GAEKCEM"/>
    <dbReference type="OrthoDB" id="504689at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003955">
        <property type="term" value="F:NAD(P)H dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.360:FF:000001">
        <property type="entry name" value="NAD(P)H dehydrogenase (Quinone) FQR1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010089">
        <property type="entry name" value="Flavoprotein_WrbA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01755">
        <property type="entry name" value="flav_wrbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30546">
        <property type="entry name" value="FLAVODOXIN-RELATED PROTEIN WRBA-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30546:SF23">
        <property type="entry name" value="FLAVOPROTEIN-LIKE PROTEIN YCP4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="Flavoproteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADPH-dependent FMN reductase-like" evidence="6">
        <location>
            <begin position="22"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00047678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="179" mass="19383" checksum="87D87F990716F22D" modified="2014-02-19" version="1" fragment="single">VPDTLAPRASWKTNVPIISRKELLEGDGFVFGFPAKFGMMAAEFQAFLDLTASVWNEEEQLLKGKPAGIFFSTGCQGGGQETTALTAIPQLVNRGMLFVPIGNILGAEKCEMEEVRGGSPFGAGTYAGSDGSREPSEIELKQAFHQGKYIATITKKLKRDPQCSFPKIARRLSQVVPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALY1</accession>
    <name>V7ALY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G055100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALY1"/>
    <dbReference type="SMR" id="V7ALY1"/>
    <dbReference type="Gramene" id="ESW06524">
        <property type="protein sequence ID" value="ESW06524"/>
        <property type="gene ID" value="PHAVU_010G055100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R41B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSERYQC"/>
    <dbReference type="OrthoDB" id="6160824at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF259">
        <property type="entry name" value="ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="4">
        <location>
            <begin position="19"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="924" mass="107027" checksum="E5A7DBF51218919A" modified="2014-02-19" version="1">MPSNAIIQYTSSSSSPATYIYDVFVSFRGEDTRNTFTSFLFQALRTKGINVVIIPIFYDVEPSVVRKQSGCYEKAFTEYEKRLREDEVKMEEVQRWRQALTQVANISGWDIRNKSQCEQIKEIVQKIIKILGPKMSRLPKDELIAIESRVEELKNLLCLEPVNDVRVVGISGMHGIGKTTLARALYERIYHQYDFGCFIDDVSNIYRDSGSLGVQKQLISQSLNEKSLELCNVIDGTYWVWTKLHNARTLIVLDNVDQGEQLKLLTGNRDIRTCISGGSRIIIISRDEHILKTHEVNYVYQVHPLSWKNVVQLFCRNAFKVNYILDDYEELASEVLFHAQGHPLAIEVIGSSLSGRNVSQWKIALGRLKYNKDRNIMDVLRISFNQLEEEEKEIFLDIPCFLNSDHEGMGYSKDEAEKILSFRGFDYKNGIPTLIEKFLITCEYGYIHMHRLLMDLGQSIVREKSPKEPLKWSRLWEYEDFEKSMLDNEATENLEVIYIECNLLSGTVRADGSLNHLSNELAYLNWRKYPFKCLPQSFQPEKLVELRLVRSSIKRLWKGTKSLNNLRFVNLSYSEDLVEMPDVRETLNLEKIELEKCIKLRKVHPSIGLLRKLAFLNLRICKNLMSLPNIILSLNSLEYLNVSGFLLLPSIPTCPCSLTCLLELDLSFCNLVRIPDAIGKLRCLERLNLKGNNFTTLPNLQNLFRLYHLNLQHCKPFKRLPVLPSQTDLPSTLQLGLLIYDCPELVVSEDCSSRIFSWVIQIFQARCSRNTDSPNLCPSAGSVIPGSEIPRWFNNQFVSMDNSIRIDASPIMHVNNWIGVDITGNGSIKDNPRIPPVDLRRDLVIAKSDHMWLFYLSLQEFHRLCYNCRWYTTYKGVTTVKFSKLMANWTKIWKKENQYVKVYLNKYGYRWVYEQDRKLPNSGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM02</accession>
    <name>V7AM02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dirigent protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G063400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Secreted</location>
            <location evidence="4">Extracellular space</location>
            <location evidence="4">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the plant dirigent protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM02"/>
    <dbReference type="STRING" id="3885.V7AM02"/>
    <dbReference type="Gramene" id="ESW06627">
        <property type="protein sequence ID" value="ESW06627"/>
        <property type="gene ID" value="PHAVU_010G063400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXST">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHAIDRK"/>
    <dbReference type="OrthoDB" id="1864232at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009699">
        <property type="term" value="P:phenylpropanoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.480.10">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044859">
        <property type="entry name" value="Allene_oxi_cyc_Dirigent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004265">
        <property type="entry name" value="Dirigent"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21495">
        <property type="entry name" value="NUCLEOPORIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03018">
        <property type="entry name" value="Dirigent"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0964">Secreted</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008194049" description="Dirigent protein" evidence="4">
        <location>
            <begin position="24"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="192" mass="21389" checksum="E12732ACE27D8B80" modified="2014-02-19" version="1">MSIPHCFLALSFLLLFSCHLLNGLEDTEFGHAIDRKLLGLKRKEKLSHFKFYWHDIVGGRNPTSVAVVPPTLKLNTTTAFGLVNMIDNPLTLGPELSSKLVGKAQGFYASASQSEIDLLMAMNFAFSEGKYNGSTITILGRNCVFNKVREMPVIGGSGLFRFARGYAEARTHWFNLKSGDATVEYNVYVMHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM79</accession>
    <name>V7AM79_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G069300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the beta-class carbonic anhydrase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM79"/>
    <dbReference type="SMR" id="V7AM79"/>
    <dbReference type="STRING" id="3885.V7AM79"/>
    <dbReference type="Gramene" id="ESW06697">
        <property type="protein sequence ID" value="ESW06697"/>
        <property type="gene ID" value="PHAVU_010G069300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1578">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10248475at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1050.10">
        <property type="entry name" value="Carbonic anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001765">
        <property type="entry name" value="Carbonic_anhydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036874">
        <property type="entry name" value="Carbonic_anhydrase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002">
        <property type="entry name" value="CARBONIC ANHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002:SF45">
        <property type="entry name" value="CARBONIC ANHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53056">
        <property type="entry name" value="beta-carbonic anhydrase, cab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="111" mass="13077" checksum="74BDCE6D06E1FE93" modified="2014-02-19" version="1">MSHPEDDFIPFDFINDWVKIGLPGKVDVLKEYEGYDFQEQYKFYEKVLSNTGVTMNNSLVNLRTYPYVQREIRNNIGLLGGYYDFVKGEFKLWKYESPITEPITIALSTHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMK9</accession>
    <name>V7AMK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glycosyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G053700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMK9"/>
    <dbReference type="SMR" id="V7AMK9"/>
    <dbReference type="Gramene" id="ESW06505">
        <property type="protein sequence ID" value="ESW06505"/>
        <property type="gene ID" value="PHAVU_010G053700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAIKRPD"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008194">
        <property type="term" value="F:UDP-glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000051">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000054">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48046:SF6">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48046">
        <property type="entry name" value="UDP-GLYCOSYLTRANSFERASE 72E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="482" mass="53120" checksum="9AC26BE0B5F0C915" modified="2014-02-19" version="1">MESSPRTTHIAIVSVPAFSHQVSILEFAKRLLHLQANTFHITCIIPTLYSSPSPSKSLFFDSLPHNIHCIFLPSLNSQDPNNKGVPVEIQIQVSTARAMPSVRETLISLSKTTGLTALIADAMAPEALEFGKELDIFSYIYFPCSTMVLSICFHSQNLDEEVSCEYKDHPGLIHLPGCISISGGDFPDSMQDRGSLGYKLFLQRCQRYLNAPDGILVNSFMELEEEATKAISQRGKDGDGDYPPVYSVGPITQSGTSESRCECLLWLDKQEANSVLYVSFGSGGTLSQEQINELALGLELSRHKFLWANLRAPNDRASATYFSDGCLVDDPLHFLPLGFLERTKEQGLVMCGWAPQVEVLGHKSIGAFLSHCGWNSVLESVVHGVAMVAWPLFAEQRTNAALVTDELKVALRAKMNTGESVVVKEEIVKVIKGLMEGLEGEEIRKKVKELKKLANSAMMEDGSSTRTISKLAHKWKHLGKSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMT0</accession>
    <name>V7AMT0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G0777000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMT0"/>
    <dbReference type="STRING" id="3885.V7AMT0"/>
    <dbReference type="Gramene" id="ESW06799">
        <property type="protein sequence ID" value="ESW06799"/>
        <property type="gene ID" value="PHAVU_010G0777000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4832">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYPASCL"/>
    <dbReference type="OrthoDB" id="5962at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072686">
        <property type="term" value="C:mitotic spindle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000940">
        <property type="term" value="C:outer kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005876">
        <property type="term" value="C:spindle microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000278">
        <property type="term" value="P:mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031110">
        <property type="term" value="P:regulation of microtubule polymerization or depolymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009829">
        <property type="entry name" value="SKA1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28573">
        <property type="entry name" value="SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28573:SF1">
        <property type="entry name" value="SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07160">
        <property type="entry name" value="SKA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="87" mass="9669" checksum="840A711BC0D51440" modified="2014-02-19" version="1" fragment="single">MTHFAEFDLREREMNGNKAGASLDSLMSSFNARITQLQELVIARNMYPASSIADLLAVDAAVSAMELQVKAIKDRLREETQAIPKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMU0</accession>
    <name>V7AMU0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G060000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMU0"/>
    <dbReference type="STRING" id="3885.V7AMU0"/>
    <dbReference type="Gramene" id="ESW06590">
        <property type="protein sequence ID" value="ESW06590"/>
        <property type="gene ID" value="PHAVU_010G060000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZCV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAPRCKK"/>
    <dbReference type="OrthoDB" id="777328at2759"/>
    <dbReference type="PhylomeDB" id="V7AMU0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038971">
        <property type="entry name" value="SMR11/SMR16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36310">
        <property type="entry name" value="CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36310:SF1">
        <property type="entry name" value="CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="214" mass="23218" checksum="1C58F6FEC21AD744" modified="2014-02-19" version="1">MASVDLCKESMKDAITPIPKAATDCAVPITPEALTENGDFQSQSPLTLSVVRKQLKRACIHCDSDPGGCVNNDDDNGNGNGRIGSPRTPEHGVFDPFAPGPDNMARAPNSNKYLDDYRNTVARRLNFHPSFDVAQADTDTLSDEEMVESVYENLLQVIFSKQAEGFLAQLSDHCETPPSAPRITGIADACYGAPKKPAAPPRNIDPRLCKKLEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANY0</accession>
    <name>V7ANY0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">LIM zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G095700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
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        <text evidence="2">Interacts with F-actin.</text>
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        <property type="project" value="UniProtKB-ARBA"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="project" value="UniProtKB-ARBA"/>
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    </dbReference>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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        </source>
    </evidence>
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            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW07020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="226" mass="25415" checksum="6A9AE1A5AB052016" modified="2014-02-19" version="1">MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKNCFKCSHCKGYLTMCTYSSMDGVLYCKPHFEQLFKESGNFSKNFAKSTEKQNDIQNRTPSKLSSMFSGTLDKCAVCSKTVYPLEKVSLEGECYHKTCFRCAHAGCPLTHSNYAALDGVVYCRVHFAQLFMEKGNYSHVLQAAAHKRTGSSTPPEPLFEEPSHPAPAEESEEPPVVEDEEKEKEKEEEEKEEESS</sequence>
</entry>
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    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
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                <person name="Wang M."/>
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                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PHAVU_010G117800g"/>
    </dbReference>
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        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW07294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="11176" checksum="F2EC9E3B66B42450" modified="2014-02-19" version="1">MKFNMMIVFLPSSLDRNEFLCQRSSPFIHLRASLHLSLSLFTCWLLVPNISCISTSIILSQFFLAIPTKFHTFAPLSPPHITPLSSTHNSPLSTFQPKS</sequence>
</entry>
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    <accession>V7ATR5</accession>
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        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
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        <name evidence="3" type="ORF">PHAVU_009G089600g</name>
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    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
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                <person name="Song Q."/>
                <person name="Chavarro C."/>
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                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
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                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
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                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="4">cv. G19833</strain>
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        <property type="gene ID" value="PHAVU_009G089600g"/>
    </dbReference>
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    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
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        <property type="entry name" value="ANTHER-SPECIFIC PROLINE-RICH PROTEIN APG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33670">
        <property type="entry name" value="SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE"/>
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            <end position="74"/>
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        <location>
            <begin position="108"/>
            <end position="150"/>
        </location>
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            <begin position="119"/>
            <end position="130"/>
        </location>
    </feature>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
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</entry>
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        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
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    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G133200g</name>
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    <organism evidence="3 4">
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        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>eudicotyledons</taxon>
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            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
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            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW29"/>
    <dbReference type="SMR" id="V7AW29"/>
    <dbReference type="STRING" id="3885.V7AW29"/>
    <dbReference type="Gramene" id="ESW09505">
        <property type="protein sequence ID" value="ESW09505"/>
        <property type="gene ID" value="PHAVU_009G133200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1947">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GNMITEW"/>
    <dbReference type="OrthoDB" id="423607at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019005">
        <property type="term" value="C:SCF ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031146">
        <property type="term" value="P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22161">
        <property type="entry name" value="F-box_AtSKP2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:001615">
        <property type="entry name" value="F-box protein SKP2A isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057207">
        <property type="entry name" value="FBXL15_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006553">
        <property type="entry name" value="Leu-rich_rpt_Cys-con_subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318:SF258">
        <property type="entry name" value="F-BOX PROTEIN SKP2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318">
        <property type="entry name" value="PARTNER OF PAIRED, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25372">
        <property type="entry name" value="DUF7885"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00367">
        <property type="entry name" value="LRR_CC"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="42"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="F-box/LRR-repeat protein 15-like leucin rich repeat" evidence="2">
        <location>
            <begin position="156"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="369" mass="40494" checksum="7C47FD4626E1223D" modified="2014-02-19" version="1">MVGQDNLRAEDLNLCFERLMRVAGSGNSEKGMNLKVGVITEWKDIPMELLMQILSLVDDQTVITASGVCRGWRDSIYFGLARLSLSWCSKNMNSLVLSLVPKFTKLQTLILRQHKPQLEDKAVETIADCCHELQILDLSKSFKLTDRSLYAIAFGCRDLTKLNISGCSAFSDGALAYLASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDYVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALANRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRISVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAFHAHRAFTHFPHPAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXN0</accession>
    <name>V7AXN0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G199700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXN0"/>
    <dbReference type="SMR" id="V7AXN0"/>
    <dbReference type="STRING" id="3885.V7AXN0"/>
    <dbReference type="Gramene" id="ESW10324">
        <property type="protein sequence ID" value="ESW10324"/>
        <property type="gene ID" value="PHAVU_009G199700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU6F">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTTGQTH"/>
    <dbReference type="OrthoDB" id="1908613at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044787">
        <property type="entry name" value="HHO5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058673">
        <property type="entry name" value="HHO5-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31003:SF19">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR EFM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26575">
        <property type="entry name" value="HHO5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="242"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="120"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="200"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="390"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="33"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="228"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW10324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="453" mass="49740" checksum="6756EB284E72A7BD" modified="2014-02-19" version="1">MASQAESSMDYKPYSYSTLLKSFADQTDQTYKLEDFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQAFRSNQGTRPVLEEFIPIKHPNSQESTEKASNLSDKANWMTSAQLWSQASEGTKPKSTITSPKESADTGFSVSPKLALDNKHRNGGAFLPFSRERNSCQGVGGLPELALASSENEMEVKNCEDAEKCSKRDNSGKGGNCEGIVDQGKSAATESQTTHTTTTTTNTTGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHAGAPTPQLVVLGGIWVPPEYATATAHSGGPSLYGPHPTSHMPPPHYCAGTPVSQEFYNLAPSLSLPPPQDHTLHHHFHMYKTAPQTQSSSESDVRSGGGRSESIEDGKSESGSWKGENGERKGLAALRDQEGEDSTGSEITLRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZB1</accession>
    <name>V7AZB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G247600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZB1"/>
    <dbReference type="SMR" id="V7AZB1"/>
    <dbReference type="STRING" id="3885.V7AZB1"/>
    <dbReference type="Gramene" id="ESW10899">
        <property type="protein sequence ID" value="ESW10899"/>
        <property type="gene ID" value="PHAVU_009G247600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWPTSME"/>
    <dbReference type="OrthoDB" id="689350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45868">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45868:SF86">
        <property type="entry name" value="HMA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="7">
        <location>
            <begin position="15"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="82"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="98"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="259" mass="28192" checksum="58ADEA382711AEC3" modified="2014-02-19" version="1">MDTKPSQLASQPFNYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDPQQNKVTVTGNVALETLLKKLVRAGKQAEIWPENEGKISGKGLKKKKKKDEAREPQSVEKHKGTENASAKCNSENKSSSNNSPEKCSSGDQMPSKGGRSEGGGGAAKKKKNFFCQSGLSSVEAATGAPAHTGLQFQDFVGPVNVDPTRQHSLFYPESGVAAYNRLYPCYYFPSSPYTCAGLDQDGHHFQSAPLVSFEIFSDENVNGCSVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZP0</accession>
    <name>V7AZP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Alginate lyase 2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G146800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZP0"/>
    <dbReference type="STRING" id="3885.V7AZP0"/>
    <dbReference type="Gramene" id="ESW09676">
        <property type="protein sequence ID" value="ESW09676"/>
        <property type="gene ID" value="PHAVU_009G146800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTBJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRTEIKM"/>
    <dbReference type="OrthoDB" id="4221926at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014895">
        <property type="entry name" value="Alginate_lyase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33681">
        <property type="entry name" value="BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33681:SF4">
        <property type="entry name" value="OS12G0171100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08787">
        <property type="entry name" value="Alginate_lyase2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754283" description="Alginate lyase 2 domain-containing protein" evidence="1">
        <location>
            <begin position="27"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Alginate lyase 2" evidence="2">
        <location>
            <begin position="40"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Alginate lyase 2" evidence="2">
        <location>
            <begin position="121"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="22076" checksum="3C7C996C22639F71" modified="2014-02-19" version="1">MVSLPIFHQTLLPLLITITTLSLVASDPTDGFTPLSFSNSNIQIQTPYDVPQNQRYSYSNGVHRFWVYSTDKPHTSSSQTAPRSEMRITGYDYSSGVWQFEGHFSVPSGVYGGSLTHYQSATLEQNIYNKWYRFNVIHDVGANNVKIFINGVKKFDGNGRGAGNHYFKCGVYAQNGASNYMESRWRDIKIFRKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B153</accession>
    <name>V7B153_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G224300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B153"/>
    <dbReference type="Gramene" id="ESW10618">
        <property type="protein sequence ID" value="ESW10618"/>
        <property type="gene ID" value="PHAVU_009G224300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7IT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KFTVYYE"/>
    <dbReference type="OrthoDB" id="1921606at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36369">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36369:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="187" mass="20992" checksum="78D29E13272B59B3" modified="2014-02-19" version="1">MNVLDSNVEALAFNYLSFGLLTALNNLWACLALLTAALSFWKIRSAGCPKPNPEAQPTAGPEPLTPSQEKTEPTREAVNANGGAEEDVDGVRKGKFTVYYEEHVQCSCEIENEGFATAWEESEGSQTEWWERWERLLRLRNGESENGWYTRQDVTVLNGSVVRLWDGGLTASSAMYKCHKNRNRCKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1P2</accession>
    <name>V7B1P2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G204300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1P2"/>
    <dbReference type="SMR" id="V7B1P2"/>
    <dbReference type="STRING" id="3885.V7B1P2"/>
    <dbReference type="Gramene" id="ESW10381">
        <property type="protein sequence ID" value="ESW10381"/>
        <property type="gene ID" value="PHAVU_009G204300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S67V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARRSRMQ"/>
    <dbReference type="OrthoDB" id="551672at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd14702">
        <property type="entry name" value="bZIP_plant_GBF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000020">
        <property type="entry name" value="BZIP transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044521">
        <property type="entry name" value="AtbZIP8/43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045314">
        <property type="entry name" value="bZIP_plant_GBF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46324">
        <property type="entry name" value="BASIC LEUCINE ZIPPER 43-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46324:SF7">
        <property type="entry name" value="BASIC LEUCINE-ZIPPER 75"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07716">
        <property type="entry name" value="bZIP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="7">
        <location>
            <begin position="96"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="14"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="188" mass="21496" checksum="F67B1B664AA1D53A" modified="2014-02-19" version="1">MEGNEAKRLGGPPNFSTLTQHSSFLSPTQNSTLNNETTEGHMRYRDCIFTHVDSSQVLHHIPLYCSRLHLSNNTNSPNTSSNSNNNNNADEAIALLEDRKKRMFSNRESARRSRMQKKQQIESLQCHLDHLQTLNRQLSEKIIYLLECNQQILQHNAQLKDKVSYLQVAVSELLGPPGHVDQSNHFPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1R5</accession>
    <name>V7B1R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G063000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1R5"/>
    <dbReference type="SMR" id="V7B1R5"/>
    <dbReference type="Gramene" id="ESW11842">
        <property type="protein sequence ID" value="ESW11842"/>
        <property type="gene ID" value="PHAVU_008G063000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SSI4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NICHTWN"/>
    <dbReference type="OrthoDB" id="1383994at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025097071" description="S-protein homolog" evidence="6">
        <location>
            <begin position="24"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14799" checksum="18F712206C35970A" modified="2014-02-19" version="1">MPLFTKSVLFLFVFISWNTSVLGEFVLITNTLKGKEALNLHCISKYYDFGVRVLNFNQTFHWKFKASVSGDTLLLCSFQWGKAGLVRYDVYMKDRDEGICKVCRWYVKEDGPCRQESKHLSCYKWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2U0</accession>
    <name>V7B2U0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G237000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2U0"/>
    <dbReference type="STRING" id="3885.V7B2U0"/>
    <dbReference type="Gramene" id="ESW10776">
        <property type="protein sequence ID" value="ESW10776"/>
        <property type="gene ID" value="PHAVU_009G237000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2ES">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MIRVVHL"/>
    <dbReference type="OrthoDB" id="736928at2759"/>
    <dbReference type="PhylomeDB" id="V7B2U0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025322">
        <property type="entry name" value="PADRE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33052">
        <property type="entry name" value="DUF4228 DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14009">
        <property type="entry name" value="PADRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="118"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="18671" checksum="A264E68964573230" modified="2014-02-19" version="1">MGACFSSKPSSTTNNVRLVHLSGYVEDFNQPISVSQLTDTFPKHFVCTSVQLLSPCSKPLNGDTQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTSIAKTCKGSSLKEGPFSSQHGLSNSWSSPSRSPGRLGVVEKSPSRVQPWKPILDTIRERSFNRRSESDLQEHC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B426</accession>
    <name>V7B426_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G046300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B426"/>
    <dbReference type="SMR" id="V7B426"/>
    <dbReference type="Gramene" id="ESW11628">
        <property type="protein sequence ID" value="ESW11628"/>
        <property type="gene ID" value="PHAVU_008G046300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11629">
        <property type="protein sequence ID" value="ESW11629"/>
        <property type="gene ID" value="PHAVU_008G046300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRLVPCE"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47938:SF35">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 4, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47938">
        <property type="entry name" value="RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="13"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="137"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="172"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="207"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="242"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="277"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="312"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="348"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="383"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="418"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="453"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="488"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="523"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="558"/>
            <end position="592"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW11628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="698" mass="79170" checksum="7FB39E6C8456AB4A" modified="2014-02-19" version="1">MFSCVILRRIHASPHTLTSVFIFRTRSLTHTPSSSTSSSSSSCVQSTVKQVCSLVYDSYEDQHTHTRFSPLHLDVDPNSLTHDQVVTIVASLASDAGSLVAHRFFNWVIASSKFRHFTRLYIACATSLIGNRNVEMVHEVLQCMVNSFAEIGRLKEAVEIVIEMHNQGLVPSTKTLNWVVRIVMKMGLVEYAENVFDEMCARGVQPNCLSYRIMVVGYCRVGNVLEADRWLRAMIERGFVVDSVTFTLVVREFCEKGFVTRALWYFRRLSEMGLRPNLINFTCMIDGLCKRGSVKQAFEMLEEMVGKGWKPNVYTHTALINGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDGKINRAEMLLSRMKEQGLAPNTNTYTTLVDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIIDGLCKKGRVQEAFNVLKSGFRNGLEADKVTYTILISEHCKQGEIKQALVLFNKMVKSGIQPDIHSYTTLISVFCREKRMKESEMFFEEALRFGLVPTNQTYTSMICGYCKEGDLSLAFKFFHRMSDHGCAPDSITYGALISGLYKQSKLDEARGLYDAMIEKGLTPCEVTRVTLAYEYCKIEDSCSAMVVLERLEKKPWIRTVNTLVRKLSSEKKVGMAALFFRKLLDMDPHVDRVTLAAFMTACYESSNYALVSDLSSRIYKENHLAIKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5Z2</accession>
    <name>V7B5Z2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G187400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5Z2"/>
    <dbReference type="SMR" id="V7B5Z2"/>
    <dbReference type="STRING" id="3885.V7B5Z2"/>
    <dbReference type="Gramene" id="ESW13332">
        <property type="protein sequence ID" value="ESW13332"/>
        <property type="gene ID" value="PHAVU_008G187400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R3QF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ALHIEVY"/>
    <dbReference type="OrthoDB" id="1910234at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04051">
        <property type="entry name" value="C2_SRC2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044750">
        <property type="entry name" value="C2_SRC2/BAP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246:SF15">
        <property type="entry name" value="CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32246">
        <property type="entry name" value="INGRESSION PROTEIN FIC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="316" mass="33960" checksum="DC0E5C2201E80BF9" modified="2014-02-19" version="1">MAKISIEVCLISARGVRGSPSLWKRQWYAVGWVDPKSKYCTKVDASGNANPLWRTKFGIQVDSSDPDLALHLEVYSRDPLFLTEKLHGSATVVLREFLTKQVKSSEEVGSYQLRKKKSNKPSGFIDVSIRLSENKEDPSFHPQGDGEGIVLLDYGNNTHLTPGVGFGQAYPQQKPQASFHHFRGSGKQVQTNVPYSHPVPFPADYATNPPYMSGPSYPAATGPSYQTPRTTPPPPHSNVNYAPTFFPTNGGMAPSYFNMPSSSGTGPGAGPRPRGPPGFAIGAGAGALAAGAVMFGDNFMSQLGDPTLTIATDPLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B606</accession>
    <name>V7B606_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G160300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B606"/>
    <dbReference type="SMR" id="V7B606"/>
    <dbReference type="STRING" id="3885.V7B606"/>
    <dbReference type="Gramene" id="ESW13010">
        <property type="protein sequence ID" value="ESW13010"/>
        <property type="gene ID" value="PHAVU_008G160300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1MA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KIVWSER"/>
    <dbReference type="OrthoDB" id="74247at2759"/>
    <dbReference type="PhylomeDB" id="V7B606"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.630.30:FF:000106">
        <property type="entry name" value="Acetyltransferase At1g77540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045057">
        <property type="entry name" value="Gcn5-rel_NAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031165">
        <property type="entry name" value="GNAT_YJDJ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31435">
        <property type="entry name" value="PROTEIN NATD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31435:SF9">
        <property type="entry name" value="PROTEIN NATD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14542">
        <property type="entry name" value="Acetyltransf_CG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51729">
        <property type="entry name" value="GNAT_YJDJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="16"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="114" mass="12544" checksum="7C0889E677B10454" modified="2014-02-19" version="1">MATSSKGEGEGEGGKSNNIVWNEALQRFETEDKEAFLEYVLREKGKVMDLVHTFVPPSKRGLGLASHLCVAAFHHAQSHSFSVIPTCSYISDTFLPRNPSWNSVVYSKGGKSNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6Z4</accession>
    <name>V7B6Z4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Fructose-bisphosphate aldolase</fullName>
            <ecNumber evidence="5 10">4.1.2.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G189200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:14729"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 4/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the class I fructose-bisphosphate aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.13" evidence="5 10"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6Z4"/>
    <dbReference type="SMR" id="V7B6Z4"/>
    <dbReference type="STRING" id="3885.V7B6Z4"/>
    <dbReference type="Gramene" id="ESW13355">
        <property type="protein sequence ID" value="ESW13355"/>
        <property type="gene ID" value="PHAVU_008G189200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1557">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHIANTE"/>
    <dbReference type="OrthoDB" id="36455at2759"/>
    <dbReference type="PhylomeDB" id="V7B6Z4"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00948">
        <property type="entry name" value="FBP_aldolase_I_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.70:FF:000068">
        <property type="entry name" value="Fructose-bisphosphate aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029768">
        <property type="entry name" value="Aldolase_I_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000741">
        <property type="entry name" value="FBA_I"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF033379">
        <property type="entry name" value="FrucBisAld_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11627">
        <property type="entry name" value="FRUCTOSE-BISPHOSPHATE ALDOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00274">
        <property type="entry name" value="Glycolytic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51569">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00158">
        <property type="entry name" value="ALDOLASE_CLASS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0704">Schiff base</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW13355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="358" mass="38601" checksum="0F49DB3710EA31C6" modified="2014-02-19" version="1">MSHFKGKYHDELIANAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFTAPGALQYLSGVILFEETLYQSTASGKPFVELLKENGVLTGIKVDKGTVELAGTDQETTTQGLDGLGQRCAKYYEAGARFAKWRAVLKIGPNEPSELSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIHKCAAVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSKSAKVSPQVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASLNLNAINQVNGKKPWSLSFSFGRALQQSTLKAWGGKEENVKKAQEALLVRAKANSEATLGTYKGSSQLDDGAKESLYVENYKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9A3</accession>
    <name>V7B9A3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">WAT1-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G164100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9A3"/>
    <dbReference type="SMR" id="V7B9A3"/>
    <dbReference type="Gramene" id="ESW13056">
        <property type="protein sequence ID" value="ESW13056"/>
        <property type="gene ID" value="PHAVU_008G164100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV8F">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPENVND"/>
    <dbReference type="OrthoDB" id="1414412at2759"/>
    <dbReference type="PhylomeDB" id="V7B9A3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030184">
        <property type="entry name" value="WAT1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31218">
        <property type="entry name" value="WAT1-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="16"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="78"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="257"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="7">
        <location>
            <begin position="27"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="7">
        <location>
            <begin position="190"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="395" mass="43763" checksum="439854B1E22EAEF4" modified="2014-02-19" version="1">MECWKKVYDWFCNSKSYLIILSLQFGSAGMYLITMDALNKGMSHYVYVVYRNVIATVALGPFAFFLERKVRPKMTVRIFSEIMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRLERMNIKEVGCLAKMSGTMVTLGGAFLMALYKGPILRIAGSSATHVDQPENVNDPSGHHWLLGACFLLIGCAGFAAFYILQAITLRKYPAEMSLATWICFLGALQSGAVTIFMEPNTPHAWSLAWDSRLVAYTYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIIGGGVVVIGLYLVVWGKSKEQKKHLMPPSPEKVTLQRQQQLPVTVLRSDGNDNKPQLVIIGDKNQEMDEARTVTIENQQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BA49</accession>
    <name>V7BA49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF599 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G188300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7BA49"/>
    <dbReference type="Gramene" id="ESW13346">
        <property type="protein sequence ID" value="ESW13346"/>
        <property type="gene ID" value="PHAVU_008G188300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS3Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="761598at2759"/>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006747">
        <property type="entry name" value="DUF599"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31168:SF1">
        <property type="entry name" value="DUF599 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31168">
        <property type="entry name" value="OS02G0292800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04654">
        <property type="entry name" value="DUF599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="250" mass="28314" checksum="86606089710D2F74" modified="2014-02-19" version="1">MEKKVLDLILVPSGLLLMLVYHLWLFYRIMKHPTKTVIGVNAINRRFWVQAMMEDVSKNGVLAVQSLRNNIMASTLLASTAIMLSSLIAVLMSSGNERKTVMSEVFGDRSDLGLSVKFFSILVCFLLAFLLNVQSIRYYSHASILINVPFKKVSQNPRHQMLTAEYVATTVNRGSYFWSLGLRAFYLSFPLFMWLFGPIPVFFSSLALVSMLYFLDVIFESGYSGVLDTDSAQVFELNNHHADVEIGRDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAW4</accession>
    <name>V7BAW4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">CSC1-like protein At3g21620</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G210700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CSC1 (TC 1.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAW4"/>
    <dbReference type="SMR" id="V7BAW4"/>
    <dbReference type="Gramene" id="ESW13606">
        <property type="protein sequence ID" value="ESW13606"/>
        <property type="gene ID" value="PHAVU_008G210700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1134">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVMPAAF"/>
    <dbReference type="OrthoDB" id="1689567at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005227">
        <property type="term" value="F:calcium-activated cation channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045122">
        <property type="entry name" value="Csc1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003864">
        <property type="entry name" value="CSC1/OSCA1-like_7TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027815">
        <property type="entry name" value="CSC1/OSCA1-like_cyt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032880">
        <property type="entry name" value="CSC1/OSCA1-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13018">
        <property type="entry name" value="PROBABLE MEMBRANE PROTEIN DUF221-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13018:SF5">
        <property type="entry name" value="RE44586P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14703">
        <property type="entry name" value="PHM7_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02714">
        <property type="entry name" value="RSN1_7TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13967">
        <property type="entry name" value="RSN1_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="9" id="KW-0407">Ion channel</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="103"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="157"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="374"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="418"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="466"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="573"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="domain" description="CSC1/OSCA1-like N-terminal transmembrane" evidence="13">
        <location>
            <begin position="11"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="CSC1/OSCA1-like cytosolic" evidence="14">
        <location>
            <begin position="199"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="CSC1/OSCA1-like 7TM region" evidence="12">
        <location>
            <begin position="372"/>
            <end position="644"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="720"/>
            <end position="755"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF13967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF14703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW13606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="755" mass="86986" checksum="694039D7F0C7C383" modified="2014-02-19" version="1">MLMASLSDIGLAAAINILSAFTFLLAFALLRIQPINDRVYFPKWYLKGLRSSPLQAGLFVSKFVNLDFKSYISFLSWMPSALQMPEPELIDHAGLDSAVFLRIYLLGLKIFVPIAFLAFSVMVPVNWTNSTLERSNLTYSEIDKLSISNIPTGSNRFWTHLVMAYAFTFWTCYILKREYQIVATMRLHFLASERRRPDQFTVLVRNVPPDPDESVSELVEHFFLVNHPDHYLTHQVVRNAKKLSSLVSKKKKTQNWLDYYELKYSRNQSTRPYKKTGCLGLWGDRVDAIDFYTAEIDRLSEEIELEKDKVMKNPKYIMPAAFVSFRTRWGAAVCAQTQQSRNPTVWLTEWAPEPRDVYWDNMAIPYVSLTIRRLIIAVAFFFLTFFFMIPIAFVQSLANIEGIEKAAPFLKPFIEMKVIKAFVQGFLPGIALKIFLIFLPSILMMMSKFEGYISTSSLEMRAATRYYIFQFINVFLGSIITGTAFQQLDKFLHQSANEIPITVGVSIPMKATFFITYIMVDGWAGCAGEILRLKPLIFYHLKIFFLVKTEKDREEAMDPGTFGFNTGEPQIQLYFLLGLVYAVVTPFLLPYIIVFFGFAYVVYRHQIINVYNQEYESAAAFWPDVHGRIIFALVISQLLLMGLLSTKEAANSTPLLITLPVLTISFHLYCKGRYQPAFIKHPLQEAMMKDTLERAREPNFNLKEFLQSAYIHPVFKGDDDSDSEVMSEKWEEQEPVVVQTKRQSRRNTHTIGKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBX9</accession>
    <name>V7BBX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G275300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBX9"/>
    <dbReference type="SMR" id="V7BBX9"/>
    <dbReference type="STRING" id="3885.V7BBX9"/>
    <dbReference type="Gramene" id="ESW14373">
        <property type="protein sequence ID" value="ESW14373"/>
        <property type="gene ID" value="PHAVU_008G275300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRXJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INKSTHR"/>
    <dbReference type="OrthoDB" id="771494at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000006">
        <property type="entry name" value="WRKY transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000001">
        <property type="entry name" value="WRKY transcription factor 33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221:SF193">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="WRKY" evidence="8">
        <location>
            <begin position="223"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="WRKY" evidence="8">
        <location>
            <begin position="399"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="326"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="552"/>
            <end position="584"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW14373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="584" mass="63099" checksum="F501D6869CB92762" modified="2014-02-19" version="1">MDAAAEPGPSSELRLNGASEDPNRSGSGQNLTARYKLIAPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVESSPTTGSLRKLQQTVHGSKAFAASATFAVTTSCFSNNTVDDRKSSFFEFKPLNRLNMVPADFNNRAIKQSTQVEGLGKAQSFVSSPLVESEIAVPANELSLSSPVQMVSSCPSASVDVDLDDVNHKGNTATGLQASHVDVRGSGLSVATEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTIMSIQVERSDKGSSLAGLDDKAPSMYGQLSHAAEPNSASEPSHVATNGDGLEGVGFVSNRIGDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRSDGPALNHASYPCPQSMGRILMGPGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDF5</accession>
    <name>V7BDF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_007G030900g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDF5"/>
    <dbReference type="SMR" id="V7BDF5"/>
    <dbReference type="STRING" id="3885.V7BDF5"/>
    <dbReference type="Gramene" id="ESW14943">
        <property type="protein sequence ID" value="ESW14943"/>
        <property type="gene ID" value="PHAVU_007G030900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDRWVSE"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000161">
        <property type="entry name" value="Wall-associated receptor kinase-like 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008:SF2">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="328"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="606"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="645"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="356"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW14943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="654" mass="73541" checksum="9179BB223B3FB912" modified="2014-02-19" version="1">MMHSMHLLFSVPKPFSHFIFHTHFLGFVLKSLILYFSHLLLIVSADQTEKCPPSFDCGILGQIQFPFTTTQQPHCGLLAIHGCQQHDPSANKTLQLGTSTTSTSYSVLKVEPRSIIIADDEQDRYLRNKSCKAFSKNVTLPHTSPLASFGIKYNITIYRCNHSLKPSLPNYFHNYSNCSSEYGIFYGLPNTLTSTGFQRPSSLAPCSAIQLPIEGSPSDDPFQFLTSNIVVEVHLSHECERCLHGKGQCLLDTNGEFYCTRERGNLAWKFGVGIGISGIVIIVLLIIWLRKPRCVFDFFSNPNPESASIYFGVPVFTYKDLVIATKSFDPSRELGEGGFGIVYYGKLRDGREVAVKRLYEHNYRRVEQFMNEIKILTRLRNKNLVSLYGCTSRDSRELLLVYEYISNGTVASHLQHHEPGNHGYLPWLIRMKVAIETATALAYLHASDIIHRDVKTSNILLDSTYCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLIELISSMPAIDLNRNKDEINLADLAIRKIHKNAIAELVDPSLGFESNGDVKTQITAVAELAFRCLQQNKELRPSMDEVLEALKIIESRKDEEPSSPSSADHDEVKLLMNMKLPPSPKAVTDKWKSHSTSPNFSDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDV3</accession>
    <name>V7BDV3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF659 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G122800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDV3"/>
    <dbReference type="STRING" id="3885.V7BDV3"/>
    <dbReference type="Gramene" id="ESW16019">
        <property type="protein sequence ID" value="ESW16019"/>
        <property type="gene ID" value="PHAVU_007G122800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RJJK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DILINRW"/>
    <dbReference type="OrthoDB" id="1435120at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF81">
        <property type="entry name" value="OS06G0658400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF659" evidence="1">
        <location>
            <begin position="161"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="550" mass="63296" checksum="384047FFABFE7820" modified="2014-02-19" version="1">MAASAANQAIEQEDETKSLWRYVSKLRKTTGGGNNMIQCSLCNFIFNGSYTRVRAHLLKLMGAGVRRCPYVTTSKLVELKKLDNEAKLKIEGNQTRSDVNPKFKGSLQAAFNIQARDTLDCDIARMFYSSGLPFHLARSPYYRSAFSNAANTSKLSGYVAPTYNKLRGPLLSKERSHVENLLQPTRHSWNQKGVTIVSDGWSDPQRRPLINFMTITESGPMFLKSIDESDNVVVCKAAGMLIESKFPSIYWTPCVVHTLNLALKNICAAKNTDKNSDIYHQCSWISQIADDATFVKNFIMGHSMRLSMFNNFNSLKLLFVAPTGFASTIVMLKSDEWSFYKKDNVDSAQFVKETLLTDNLWMKVDYILAFTAPIYDVLRKTDTDMTSLHLVYGMWDSMIENVKRVIYQHERKIEVEYSSFFKLVELILIDRWTKSSTPLHCLAHSLNPRYYSREWLDEDSKRLAPHQDHEITQERKKCFMRYFDDANIRTQVNIEFSNFLGGREDFADVDSLRDRRDDFSLDENEILEIANLSLDEPELEVVFFNEDEQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDY7</accession>
    <name>V7BDY7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G1247000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDY7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="17" mass="1824" checksum="14DBA6C0F3372152" modified="2014-02-19" version="1" fragment="single">WIGPATAPPKMPPSMSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEU9</accession>
    <name>V7BEU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pectin acetylesterase</fullName>
            <ecNumber evidence="6">3.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G071700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Secreted</location>
            <location evidence="2 6">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the pectinacetylesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEU9"/>
    <dbReference type="SMR" id="V7BEU9"/>
    <dbReference type="STRING" id="3885.V7BEU9"/>
    <dbReference type="ESTHER" id="phavu-v7beu9">
        <property type="family name" value="Pectinacetylesterase-Notum"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW15423">
        <property type="protein sequence ID" value="ESW15423"/>
        <property type="gene ID" value="PHAVU_007G071700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4287">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEIDCAY"/>
    <dbReference type="OrthoDB" id="2015280at2759"/>
    <dbReference type="PhylomeDB" id="V7BEU9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004963">
        <property type="entry name" value="PAE/NOTUM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21562">
        <property type="entry name" value="NOTUM-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21562:SF69">
        <property type="entry name" value="PECTIN ACETYLESTERASE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03283">
        <property type="entry name" value="PAE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="5 6" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008815224" description="Pectin acetylesterase" evidence="6">
        <location>
            <begin position="23"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="395" mass="44671" checksum="6295141F4331BDD7" modified="2014-02-19" version="1">MNILVPLAFLCLAALAPWRVRSQEQRLLVNMTLVHKARASGALCLDGSLPAYHLHRGFGAGKDNWLLQFEGGGWCNDLRSCFERAKTRRGSTRYMTKLEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQKIWEAIIDDLLPQGLGKARKALLSGCSAGGLATFHHCDRFAKHLPTNASVKCLSDAGFFLDERDISLNHTMRFFVKSLVQLQGVEQNLNRNCTRELYFPDLCFFPQYALKYISTPYFILNSAYDVYQFHHILVPTSADLHGHWNRCKLNPTACTADQIDTLQGFRLDMLGALNPFYINSRRGGLFINSCFAHCQSELQETWFGDDSPRINDKTIAEAVGDWYFSRNISKEIDCAYPCDGTCHNLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEX3</accession>
    <name>V7BEX3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Carbonic anhydrase</fullName>
            <ecNumber evidence="5 10">4.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_007G151300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Reversible hydration of carbon dioxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>hydrogencarbonate + H(+) = CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:10748"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="EC" id="4.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast stroma</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the alpha-carbonic anhydrase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the alpha-class carbonic anhydrase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.1" evidence="5 10"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEX3"/>
    <dbReference type="SMR" id="V7BEX3"/>
    <dbReference type="STRING" id="3885.V7BEX3"/>
    <dbReference type="Gramene" id="ESW16372">
        <property type="protein sequence ID" value="ESW16372"/>
        <property type="gene ID" value="PHAVU_007G151300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0382">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYPMAKG"/>
    <dbReference type="OrthoDB" id="429145at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03124">
        <property type="entry name" value="alpha_CA_prokaryotic_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.200.10">
        <property type="entry name" value="Alpha carbonic anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041891">
        <property type="entry name" value="Alpha_CA_prokaryot-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001148">
        <property type="entry name" value="CA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036398">
        <property type="entry name" value="CA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023561">
        <property type="entry name" value="Carbonic_anhydrase_a-class"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018338">
        <property type="entry name" value="Carbonic_anhydrase_a-class_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18952">
        <property type="entry name" value="CARBONIC ANHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18952:SF201">
        <property type="entry name" value="CARBONIC ANHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00194">
        <property type="entry name" value="Carb_anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01057">
        <property type="entry name" value="Carb_anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51069">
        <property type="entry name" value="Carbonic anhydrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00162">
        <property type="entry name" value="ALPHA_CA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51144">
        <property type="entry name" value="ALPHA_CA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="7 10" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5025091911" description="Carbonic anhydrase" evidence="10">
        <location>
            <begin position="31"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha-carbonic anhydrase" evidence="11">
        <location>
            <begin position="37"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU367011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW16372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="31855" checksum="57DE439E93CA6384" modified="2014-02-19" version="1">MNHQSRCRVFLPNLIILAIIVLHSTPWISAQEVEDESEFDYLKGSEKGPSRWGELKKEWETCKSGKMQSPIDLSSHRVKVVPKLGELKKHYKPQNATVKNRGHDIELKWGEDAGSININATDFFLHQCHWHSPSEHTINGRRYDLELHMVHESKSKNGKTKIAVVGILFKIGRPDPILSKLSEIIKSMGENEVEKKIGVFDPSEIKLGGKKYYRYIGSLTVPPCTEGVIWTINKKIKTVSRAQVNLLREAVHDHAELNSRPRQALNKRGIQLYGPKRKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFA9</accession>
    <name>V7BFA9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G1394001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFA9"/>
    <dbReference type="STRING" id="3885.V7BFA9"/>
    <dbReference type="Gramene" id="ESW16230">
        <property type="protein sequence ID" value="ESW16230"/>
        <property type="gene ID" value="PHAVU_007G1394001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0470">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MALHEVS"/>
    <dbReference type="OrthoDB" id="204980at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02860">
        <property type="entry name" value="E_set_Pullulanase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1130">
        <property type="entry name" value="Rab geranylgeranyltransferase alpha-subunit, insert domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004193">
        <property type="entry name" value="Glyco_hydro_13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040671">
        <property type="entry name" value="Pullulanase_N2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43002">
        <property type="entry name" value="GLYCOGEN DEBRANCHING ENZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02922">
        <property type="entry name" value="CBM_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17967">
        <property type="entry name" value="Pullulanase_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pullulanase N2" evidence="3">
        <location>
            <begin position="79"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 13 N-terminal" evidence="2">
        <location>
            <begin position="199"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39578" checksum="3CE6A962860DE299" modified="2014-02-19" version="1" fragment="single">MLLLASSSSSPSLSLPSLSHLHHSLPSSFPRHSLRLHFPSQATPLHLRTPPPLSCSINASSSVEQSASLSQMQNSLLYSRAYWVTEFLIAWNVDVANGSSCHLIASKNASLTIANCQIQGEDLKIELQEDRAGLPANVVEKFPHIRGYKAFKLPSTLDVKPLLKSQLAVAIYDSDDKCRNCTGLQLPGVLDELFSYDGPLGALFSEEAVSLYLWAPTAQAVRAYIYKDPSGDDPIEIVCLEEENGVWRTKGRKSWEHCYYVYEVCVYHHSTLRVEKCYANDPYARGLSSDGGRTFLLNLDSDDLKPDGWDNLANEKPTIHSFTDISIYEMHIRDFSASDLSVQPSFRGGYLAFTLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG54</accession>
    <name>V7BG54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutaredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_007G165700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutaredoxin family. CC-type subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG54"/>
    <dbReference type="SMR" id="V7BG54"/>
    <dbReference type="STRING" id="3885.V7BG54"/>
    <dbReference type="Gramene" id="ESW16550">
        <property type="protein sequence ID" value="ESW16550"/>
        <property type="gene ID" value="PHAVU_007G165700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1752">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAISHSV"/>
    <dbReference type="OrthoDB" id="418495at2759"/>
    <dbReference type="PhylomeDB" id="V7BG54"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd03419">
        <property type="entry name" value="GRX_GRXh_1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011905">
        <property type="entry name" value="GlrX-like_pln_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014025">
        <property type="entry name" value="Glutaredoxin_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02189">
        <property type="entry name" value="GlrX-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10168">
        <property type="entry name" value="GLUTAREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00160">
        <property type="entry name" value="GLUTAREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="5">
        <location>
            <begin position="13"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW16550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="105" mass="11427" checksum="EA7406AB392AFE75" modified="2014-02-19" version="1">MDLLASLYADKPVVIFSKSNCCISHSVKALIRSFGANMNVIEVDNMANGQQIERALIQLGCRPTVPAVFIGQQLIGGADELIRLNVQNELAQLLLRAGAIFIWST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGB5</accession>
    <name>V7BGB5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G196300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the JARID1 histone demethylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGB5"/>
    <dbReference type="SMR" id="V7BGB5"/>
    <dbReference type="STRING" id="3885.V7BGB5"/>
    <dbReference type="Gramene" id="ESW16934">
        <property type="protein sequence ID" value="ESW16934"/>
        <property type="gene ID" value="PHAVU_007G196300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1356">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1667110at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000118">
        <property type="term" value="C:histone deacetylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031490">
        <property type="term" value="F:chromatin DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032454">
        <property type="term" value="F:histone H3K9 demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045109">
        <property type="entry name" value="LSDs-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014977">
        <property type="entry name" value="WRC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018866">
        <property type="entry name" value="Znf-4CXXC_R1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12549:SF17">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE JMJ24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12549">
        <property type="entry name" value="JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02373">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08879">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10497">
        <property type="entry name" value="zf-4CXXC_R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51667">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="WRC" evidence="12">
        <location>
            <begin position="16"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="216"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="JmjC" evidence="11">
        <location>
            <begin position="590"/>
            <end position="886"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="105"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="171"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="692"/>
            <end position="732"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="127"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="193"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="692"/>
            <end position="705"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="711"/>
            <end position="727"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW16934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="956" mass="108266" checksum="4D179DFE9C349C28" modified="2014-02-19" version="1">MDHARSTNGEDNAAGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSQSLNESDVYLESKSDDFDVPLSAISLSQKKLSKNQFRYTPERDARRASSARHAHDEVDVDADADADVDVDADVDVDADVDVDVDADADADADADVALYEEDNWVSYDSPPDSSRKRSRRSLDANATTQEYSDRTSGSSEDTGGQTCHQCRRNDRDRVTWCLRCDRRGYCDSCISAWYSDISLDEIQRICPACRGICNCKTCLRSDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRIKFNTDEQMCCNFCRIPITDYHRRCPNCSYDLCLNCCRDLREATADRNEEPQTELAKTYDQNILSKFPQWRSNDNESIPCPPKEYGGCGHSSLNLSRIFKMNWVAKLVKNVEEMVSGCRISNDYGTTPEIGLSDLRLCQCSHREASDDNYLYCPASEDIKTDGIGNFRKHWKTGEPIIVKQVFDGSSISSWDPMVIWRGILETTDEKAKDENRMVKAIDCLDGSEIDIELAEFMKGYLEGRIHENGWPQLLKLKDWPSPSASEEFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYMAYGISDELGRGDSVTNLHFNIRDMVYLLVHTNEVKLKDWQRTKIEIMQKAKTNEESEAKESHGDPQIFSSGSSLDSSLGTKSSGLDMDSNQNKSIMDEEFEIYSGAEGNMVNFKVPSTQNGDVSEETHPGVLWDVFRRQDVPILTKYLKIHWKELGKSGDAGNEFVAWPLYGGAIFLDKHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSNVQLGLDFLSPESLGDAVRLTEEVRCLPNEHESKIQVLEVGKISLYAASSAIKEVQKLVLDQKLGAQIGYGDPNLTAMVSENYEKMVKRRQITCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGJ6</accession>
    <name>V7BGJ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MHD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G203200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the adaptor complexes medium subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGJ6"/>
    <dbReference type="SMR" id="V7BGJ6"/>
    <dbReference type="STRING" id="3885.V7BGJ6"/>
    <dbReference type="Gramene" id="ESW17014">
        <property type="protein sequence ID" value="ESW17014"/>
        <property type="gene ID" value="PHAVU_007G203200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2740">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVKLLRF"/>
    <dbReference type="OrthoDB" id="870at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030131">
        <property type="term" value="C:clathrin adaptor complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09252">
        <property type="entry name" value="AP-3_Mu3_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14837">
        <property type="entry name" value="AP3_Mu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.60:FF:000002">
        <property type="entry name" value="AP-2 complex subunit mu, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1170">
        <property type="entry name" value="Mu homology domain, subdomain B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050431">
        <property type="entry name" value="Adaptor_comp_med_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036168">
        <property type="entry name" value="AP2_Mu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001392">
        <property type="entry name" value="Clathrin_mu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011012">
        <property type="entry name" value="Longin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028565">
        <property type="entry name" value="MHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10529">
        <property type="entry name" value="AP COMPLEX SUBUNIT MU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00928">
        <property type="entry name" value="Adap_comp_sub"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005992">
        <property type="entry name" value="Clathrin_mu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00314">
        <property type="entry name" value="CLATHRINADPT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49447">
        <property type="entry name" value="Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64356">
        <property type="entry name" value="SNARE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51072">
        <property type="entry name" value="MHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="MHD" evidence="6">
        <location>
            <begin position="178"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="46507" checksum="83360453C61761DB" modified="2014-02-19" version="1">MLQCIFLLSDAGEVMLEKQLSGHLVDRSICAWFWEQAVSLGDSFKQQPVISSHTHYIFQVFRDGITFLGCTQIEMPPLMAIEFLCRVADVLNDYFGTLNEDIIKDNFVIVYELLDEMIDNGFPLTTEPSSLREIIYPPNVVNKALSIVTGSNSNVSDTLPRATASCIPWRTSEPKYSNNEVYVELVEEMDAIINRDGGLLKCEIYGEVQVNSRISGFPDLTLSFTNPSVLDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRELKSTPIYVKPQLISDGGTCHLSVLVGIRNDPGKTIDSVTVQFQLPPFILSADLTSNHGTVNILAKKTCIWSIGQIPKDKAPSMSGLLVVETGLERLHVFPSFQVGFRIMGVALSGLQIDKLDLKNEPGRFYKGFRALTRAGQFDVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHD9</accession>
    <name>V7BHD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">lipid IVA 3-deoxy-D-manno-octulosonic acid transferase</fullName>
            <ecNumber evidence="2">2.4.99.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G224100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>lipid IVA (E. coli) + CMP-3-deoxy-beta-D-manno-octulosonate = alpha-Kdo-(2-&gt;6)-lipid IVA (E. coli) + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28066"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58603"/>
            <dbReference type="ChEBI" id="CHEBI:60364"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:85987"/>
            <dbReference type="EC" id="2.4.99.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 30 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.12" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHD9"/>
    <dbReference type="SMR" id="V7BHD9"/>
    <dbReference type="STRING" id="3885.V7BHD9"/>
    <dbReference type="Gramene" id="ESW17257">
        <property type="protein sequence ID" value="ESW17257"/>
        <property type="gene ID" value="PHAVU_007G224100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSA5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIKYEFW"/>
    <dbReference type="OrthoDB" id="308383at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043842">
        <property type="term" value="F:Kdo transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11720:FF:000001">
        <property type="entry name" value="3-deoxy-D-manno-octulosonic acid transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000032">
        <property type="entry name" value="3-deoxy-D-manno-octulosonic acid transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11720">
        <property type="entry name" value="3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007507">
        <property type="entry name" value="Glycos_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038107">
        <property type="entry name" value="Glycos_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039901">
        <property type="entry name" value="Kdotransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42755:SF1">
        <property type="entry name" value="3-DEOXY-D-MANNO-OCTULOSONIC ACID TRANSFERASE, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42755">
        <property type="entry name" value="3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04413">
        <property type="entry name" value="Glycos_transf_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="3-deoxy-D-manno-octulosonic-acid transferase N-terminal" evidence="8">
        <location>
            <begin position="39"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="7">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR639901-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR639901-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW17257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="448" mass="50729" checksum="F3DAC95E46875744" modified="2014-02-19" version="1">MKKGLVVYKLYRALSYGVSPLIRLHLRWRWFLGLEHPLRWPERLGHPSQPRRPGPLIWFHAVSLGEGMIAIPVIKRCIRRMPHLNVLMTITTMSAFEVLSKSLPSEIILQFSPVDIPTSIHSFLDYWKPNAIVLMESELWPNLIMDASRNGITLALLNARMSKKSFKYWSGSVLLPLISLMLSKFSLIVPLSTEQGIRFQLLQAPPYIINFSGDLKYVIEDFGVNERGRNNIENLRLQLTQKQVWMASSIHRGEEEIILGVHFALMQQQPNIMTIIVPRHLQQGREIARKLEKEGQNVLLRSQYEKFKPGTNIYVVDTLGELRQLYTLTPIAVIGGSLLPGLSGHNITEAAAAGCAVLTGCHVGHFSHMVLEMQRSNPLSVLQVSGKLELEKALLELFTNATLLEARGRAAKEVFFSLSCGILEKTWSLLNFHIFSRLSAEESKSLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BI74</accession>
    <name>V7BI74_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G254700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BI74"/>
    <dbReference type="SMR" id="V7BI74"/>
    <dbReference type="Gramene" id="ESW17619">
        <property type="protein sequence ID" value="ESW17619"/>
        <property type="gene ID" value="PHAVU_007G254700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NNALSEW"/>
    <dbReference type="OrthoDB" id="2018467at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd14798">
        <property type="entry name" value="RX-CC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038005">
        <property type="entry name" value="RX-like_CC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF61">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="10"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="171"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="437"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="563"/>
            <end position="768"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW17619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="850" mass="96824" checksum="9FB8548D93E37D6E" modified="2014-02-19" version="1">MAESLIFAVAESLIVKLASRAVEQASLALGVYQDLQQMKKTMAMIKAFLLDAEQKRQQNNALSEWLRQIRQVFARAEDIVDNFECEVLRKRVVNTHGSFSRKVCRLLSTKNPVIYRFIMGREIKDIKKQLEKVLAYGHMFGLQSSDNDTVVVHTREMTHSHVNVSNVVGREHDKQKIIELLLQDGDYDRSVSVTSIVGFGGSGKTTLAKVVFNDTKVEEFFTLKMWVCVSNDFELRNVLIKILNSAPNPTNEKFKNLETDQLQNRLRNTLHRQKFLLVLDDVWNENHVKWGELKEIIDMVGDEGSKILVTTRSHSIDAMMRTKSSNSYFLKGLSEEDSLSLFVKSAFDDGEGKNHPELMEIGRQIVRKCGGIPLAVRTLGSSLFSRVDKKEWENIRDNEIWNLKQNENDILPALELSYDQLPSHLKRCFACFSLASKDFDVSSSYVALLWEALGFLSPSKESKTTHDVANEFLRELWSRSFLTDFLDMGSTCRFKLHDLVRDLAVYVAKGEFQILYPHSTSISEHAQHLSFIENDMLGQDLVPIGLRTIIFPMEATNDAFLNTLLSRCKYLRVLDLSYSIYESLPHYIGKLKHLRYLNLSGNQKLKGLPDSVCKLQNLQTLDLRGCIKVQKLPKGIRKLISLRRLLVTTRQPDFPDKEISNLASIETLELYSCDNLESLFQAIQPSSLKFLHLSGCGGLKSLSFHVIANLESLVIFKCSKMELSMGLSNLSSIPDSRLKLLVLQSLPQLVTLPEWLQGSLNTLHSLLIVDCNNLEELPEWLSTLTCLKLLIIEHCPRLITLPDSTRHLRNLEHLEINDCPELCKRCQPGVGLDWHKISHIKQVIIGEPEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK06</accession>
    <name>V7BK06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G028700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK06"/>
    <dbReference type="SMR" id="V7BK06"/>
    <dbReference type="STRING" id="3885.V7BK06"/>
    <dbReference type="Gramene" id="ESW18292">
        <property type="protein sequence ID" value="ESW18292"/>
        <property type="gene ID" value="PHAVU_006G028700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SIELRWW"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="230"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="351"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="393"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="424"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="454"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW18292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="506" mass="55504" checksum="7BF98B11B54A94C2" modified="2014-02-19" version="1">MNSESGYQPLLLGLHSHSHIPDLSSDTIEDFLKHRSIELRWWPQLVAWESRLIWLLSWASILVSIFNYMLSFVTLMFTGHLGPLELAGASIAIVGIQGLAYGIMLGMASAVQTVCGQAYGARKYSAMGIILQRAIILHLGAAVILTFLYWFSGSFLKAIGQSESIAEKGQVFARGIILQLYAFAVSCPMQRFLQAQNIVNPLAFMSIGVFLLHVLLSWLVVFVLDYGLVGAALTLSISWWLLVLLNGLYIILSPRCKQTWGGLTVKAFKGIWPYFKLTAAYAWMLCLETWYNQGLILLSGLISNPTVSVDTISICMNYLNWDLQFMLGLSAATSVRISNELGAAHPRVAKFSVIVVNGISIAISVVFCAIVLICQEPLSKLFTTDSEVIEEVSSLTPLLAISVFLNFIQPILSGVAIGSGWQAVVAYVNLASFYVIGLTVGCVLGFQTTLGVAGIWWGMIFAVLVQTATLIILTARTNWDAEVEKAVARIKRSAEDETLDHLIANY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK64</accession>
    <name>V7BK64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G239900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK64"/>
    <dbReference type="SMR" id="V7BK64"/>
    <dbReference type="STRING" id="3885.V7BK64"/>
    <dbReference type="Gramene" id="ESW17440">
        <property type="protein sequence ID" value="ESW17440"/>
        <property type="gene ID" value="PHAVU_007G239900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SPGG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AWARKYL"/>
    <dbReference type="OrthoDB" id="1882251at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33527:SF28">
        <property type="entry name" value="GB|AAD43168.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33527">
        <property type="entry name" value="OS07G0274300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="371" mass="42285" checksum="8B963286DAC3120E" modified="2014-02-19" version="1">MACFLPCSDLGTNVTVSREEFFSFHNIDRLLFTRLVVGLGRDTSQSTHVMAFFMWLEKQCKDMCMVKKLLQWADPMINSLADEAIMVLNCIESPHFPYDDAVNDESLPLIRSILHQSASFKYFYHNRVAIIEAVTKLLDSVCVRAFTDIIKEVQYMKVVREQKLEYENLYGSNPYVKQVVYHNTPVPGVTIVSQQPALPPPQWGEGSSTSWETNPNMYLPLESYGVSNQHFNDLVAMMNQTSISAPTSDETQEVPVDDRIIFMTFSKGYPISEAEVRAFFARRYGDIVEALYMQEVVPPDQPLYARVVIRSRAIHLVDYLLESTNKVKLSINGKHAWARKYLRKGNKSPRDKSPVTSRPPSPTSSARQFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKM7</accession>
    <name>V7BKM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G050100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKM7"/>
    <dbReference type="SMR" id="V7BKM7"/>
    <dbReference type="STRING" id="3885.V7BKM7"/>
    <dbReference type="Gramene" id="ESW18544">
        <property type="protein sequence ID" value="ESW18544"/>
        <property type="gene ID" value="PHAVU_006G050100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7QX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAHTSGN"/>
    <dbReference type="OrthoDB" id="656626at2759"/>
    <dbReference type="PhylomeDB" id="V7BKM7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005504">
        <property type="term" value="F:fatty acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009627">
        <property type="term" value="P:systemic acquired resistance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04660">
        <property type="entry name" value="nsLTP_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039265">
        <property type="entry name" value="DIR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044741">
        <property type="entry name" value="NsLTP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33122:SF43">
        <property type="entry name" value="BIFUNCTIONAL INHIBITOR_PLANT LIPID TRANSFER PROTEIN_SEED STORAGE HELICAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33122">
        <property type="entry name" value="LIPID BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14368">
        <property type="entry name" value="LTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754440" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="1">
        <location>
            <begin position="28"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW18544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="104" mass="11079" checksum="D18E8C8C70EE9E05" modified="2014-02-19" version="1">MAHTSGNVLVQWLLATLLIAMLGGAKAIVLCDTESSKLSSCYAAVTGQYPPKPNEKCCDVVKHSNLPCLCRYKSILPAFGFNPTNALALPSKCGLKTPPECRVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKT8</accession>
    <name>V7BKT8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_007G257400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKT8"/>
    <dbReference type="SMR" id="V7BKT8"/>
    <dbReference type="STRING" id="3885.V7BKT8"/>
    <dbReference type="Gramene" id="ESW17650">
        <property type="protein sequence ID" value="ESW17650"/>
        <property type="gene ID" value="PHAVU_007G257400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRYDTMM"/>
    <dbReference type="OrthoDB" id="1103324at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd20655">
        <property type="entry name" value="CYP93"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000019">
        <property type="entry name" value="Cytochrome P450 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944:SF17">
        <property type="entry name" value="3,9-DIHYDROXYPTEROCARPAN 6A-MONOOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944">
        <property type="entry name" value="CYTOCHROME P450 98A9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 12 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 13" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="12">
        <location>
            <position position="452"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW17650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="513" mass="58222" checksum="39DD49E118B78C07" modified="2014-02-19" version="1">MADFGDYFLLLLLWLVSIFLLEAILKKFGIKRCLPPSPRALPVIGHLYLLTKLPHQAFHTISSRYGPFVFLWFGSKPCLLVSSPEMASQCLKTNETCFLNRSKKTNLDYITYGSSDLVMAPYGPYWRFMKKVCMTELLGGRMLHQHLPIRAEETRLFLNSMMQKAGLREEVNIGKELAMLTNNIITRMALRRRCCDVEGEGHQLIELVKEMTELGGKFNLGDMLWFVKKLDLQGFGKKLERVRSKYDAIIEKIIKEHEDARRKKKENNGNGDETVKDLLDILLDIYADENSEIRLTRENIKAFILNIFGAGTETTAATIEWGLVELIKHPEMMIKAREEIESVVGNDRLVKESDIPNLPYVHSIVKETMRLHPLGPVIVRQSTVDCNIKGYDIPAKTTLFVNVWAIGRDPNYWENPLEFKPERFLDEEGQSPLDLLGQHFELLSFGAGRRSCPGASLALKVILTTVAGMIQCFEWKVAEEGKGVVDMEDGSAVILPRTYPLICVPVSKCPPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNA5</accession>
    <name>V7BNA5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Anamorsin homolog</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Fe-S cluster assembly protein DRE2 homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_006G008800g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electrons for reduction during radical cofactor maturation in the catalytic small subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Mitochondrion intermembrane space</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="10">The C-terminal domain binds 2 Fe-S clusters but is otherwise mostly in an intrinsically disordered conformation.</text>
    </comment>
    <comment type="domain">
        <text evidence="10">The N-terminal domain has structural similarity with S-adenosyl-L-methionine-dependent methyltransferases, but does not bind S-adenosyl-L-methionine. It is required for correct assembly of the 2 Fe-S clusters.</text>
    </comment>
    <comment type="domain">
        <text evidence="10">The twin Cx2C motifs are involved in the recognition by the mitochondrial MIA40-ERV1 disulfide relay system. The formation of 2 disulfide bonds in the Cx2C motifs through dithiol/disulfide exchange reactions effectively traps the protein in the mitochondrial intermembrane space.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the anamorsin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNA5"/>
    <dbReference type="STRING" id="3885.V7BNA5"/>
    <dbReference type="Gramene" id="ESW18046">
        <property type="protein sequence ID" value="ESW18046"/>
        <property type="gene ID" value="PHAVU_006G008800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4020">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACKNCTW"/>
    <dbReference type="OrthoDB" id="311633at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005758">
        <property type="term" value="C:mitochondrial intermembrane space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03115">
        <property type="entry name" value="Anamorsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007785">
        <property type="entry name" value="Anamorsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046408">
        <property type="entry name" value="CIAPIN1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13273">
        <property type="entry name" value="ANAMORSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13273:SF14">
        <property type="entry name" value="ANAMORSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05093">
        <property type="entry name" value="CIAPIN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3 10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransferase type 11" evidence="12">
        <location>
            <begin position="44"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Anamorsin C-terminal" evidence="11">
        <location>
            <begin position="186"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Fe-S binding site B" evidence="10">
        <location>
            <begin position="226"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Cx2C motif 1" evidence="10">
        <location>
            <begin position="226"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Cx2C motif 2" evidence="10">
        <location>
            <begin position="237"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW18046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="28167" checksum="769EE1855AE083D7" modified="2014-02-19" version="1">MDSAKTHGAVLACTDGAVLSVNQALEAIRELGIEGVQQSDPLVITSASLLNKLPVESSSFDSAILFWLSSDCPGDQLIQEILRVLKVGGIILIRKSSQSIVGSFDKIISDLQSKLLLAGFSEAQILQSIGIKAKKPSWKVGSAFALKKVIKSSPKIQIDVDSDLIDEDSLLTEEDLKKPQLPPGDCEIGSTRKACKNCTCGRAEEEDKVLKLGLTTEQINNPQSACGSCGLGDAFRCSTCPYKGLPAFKLGEKVALSGNFLAADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPC0</accession>
    <name>V7BPC0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_006G080500g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPC0"/>
    <dbReference type="SMR" id="V7BPC0"/>
    <dbReference type="Gramene" id="ESW18900">
        <property type="protein sequence ID" value="ESW18900"/>
        <property type="gene ID" value="PHAVU_006G080500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS0B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPFPYEY"/>
    <dbReference type="OrthoDB" id="2020077at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000328">
        <property type="entry name" value="Leucine-rich repeat protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000453">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase HSL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000387">
        <property type="entry name" value="Probable LRR receptor-like serine/threonine-protein kinase At1g06840"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45974:SF134">
        <property type="entry name" value="OS01G0960400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45974">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="16" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 22" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 21" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="22">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755185" description="non-specific serine/threonine protein kinase" evidence="22">
        <location>
            <begin position="27"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="553"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="23">
        <location>
            <begin position="618"/>
            <end position="892"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="902"/>
            <end position="951"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="20">
        <location>
            <begin position="915"/>
            <end position="924"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="20">
        <location>
            <begin position="931"/>
            <end position="944"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="646"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW18900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="951" mass="105177" checksum="9373C30BCA7847BA" modified="2014-02-19" version="1">MYLSKSFKHEVVVILWFFCYLLHAAGQNNITNSVEVEALKAIKSSLIDPNGNLSNWNHGDPCTSRWKGVLCFNETQEDGFLHVEELQLLSLQLSGTLAPDLGKLTYMKRLNFMWNNISGSIPKEVGNIKSLELLLLNGNNLTGPLPEEIGYLPNLDRIQIDQNHISGPIPRSFANLNKTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPPELYKLPNLLIIQLDNNNFGGNSIPDTYANMSKLLKMSLRNCRLRGPVPDLSRIPRLLYLDLSFNQLNESIPPNKLSENITTIDLSNNHLTGNIPSYFDDLPRLQKLSLANNSLNGNVSSSIWLNKNSNGSENFLLELQNNSLTGISGSTDLPPNVTVVLDRNPLCSNTTLVKFCGSEGATVTNGSFTTNSSFCPPQGCPPPYEYSVNCFCALPLLVAYRLKSPGFSDFTPYLNEFETYMTTGLQLSTDQLEYDFYWQVGPRLRMDLKFFPLYVNSTSNHTFNSSELLRITSMFTGWLIADSDLFGPYELIGFNLLGPYKDEIGKRSKTGIRTGALVGIIVGAIACAVTLSAIVTLLILRIKLRGYHTVSKRRHASRISIKIDGVRAFTYGELSSATNNFSTSAQVGQGGYGKVYKGTLSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKEPLTFAMRLKIALGAAKGLMYLHTEADPPIFHRDVKASNILLDPKFSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMHPISHGKNIVREVNIAYQRGVIFSIIDGRMGSYPSEQVEKFLTLALKCCEDEPEARPRMTEVVRELENIWYTMPESDTKRAEFISSDSGKTDSHSIPSSSSASAMKTPFVSGDVSGSDLVSGVIPSINPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQJ6</accession>
    <name>V7BQJ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Dof zinc finger protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G114900g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8 9">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQJ6"/>
    <dbReference type="STRING" id="3885.V7BQJ6"/>
    <dbReference type="Gramene" id="ESW19325">
        <property type="protein sequence ID" value="ESW19325"/>
        <property type="gene ID" value="PHAVU_006G114900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW19326">
        <property type="protein sequence ID" value="ESW19326"/>
        <property type="gene ID" value="PHAVU_006G114900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502REBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DKYHGMS"/>
    <dbReference type="OrthoDB" id="1927254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045174">
        <property type="entry name" value="Dof"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003851">
        <property type="entry name" value="Znf_Dof"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992:SF241">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31992">
        <property type="entry name" value="DOF ZINC FINGER PROTEIN DOF1.4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02701">
        <property type="entry name" value="Zn_ribbon_Dof"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01361">
        <property type="entry name" value="ZF_DOF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50884">
        <property type="entry name" value="ZF_DOF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 9" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 8 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Dof-type" evidence="11">
        <location>
            <begin position="24"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="65"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU369094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW19325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="254" mass="27742" checksum="A175DEF5B418DC0C" modified="2014-02-19" version="1">MEEIGPNSCAQASLEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATSSKVPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPAAMDKYHGMSPYGEMPKLEIGGENNTGHHHSPSSLSPPYGMVSRGLNPYAPNPFMTSSDSLYTPNYPMQEIKPNLSFSVDGFGNRSHGVQENGGGGRLLFPFGDIKHLSAGVEVEHNKEQGNNPTGYWTGIIGEGSSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR50</accession>
    <name>V7BR50_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G093100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR50"/>
    <dbReference type="Gramene" id="ESW19056">
        <property type="protein sequence ID" value="ESW19056"/>
        <property type="gene ID" value="PHAVU_006G093100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPNIAIW"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080156">
        <property type="term" value="P:mitochondrial mRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000417">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g38010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000470">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At5g66520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000184">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015">
        <property type="entry name" value="OS07G0578800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015:SF2016">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="68"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="169"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="277"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="379"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW19056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="561" mass="63124" checksum="6F479B10523188E2" modified="2014-02-19" version="1">MINQNSIISLLAKCKSMSELKKLHALIITTPTIKSIVPLSKLIDFCVDSEFGDINYAGLVFRQIDTPSVYIWNSMIRGFVNGHNPRMSMLVYKHMIEDGYSPDHFTFPFALKACCLIADQDCAKCIHSCIMKSGFEADAYTATGLLHMYVSCADMKSGQQVFDNIPKWNVVAWTCLIAGFVNNNQPYEALKVFEDMSHWGVEPNEITMVNALIACARSRDIDSGRRIHQRIRKTDYDPFMCTSNSNIILATAILEMYAKCGSLKIARDLFRKMPKRNIVAWNSMINAYNQYERHQEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQAVHAYLLKTDIIRTDIALATALLDMYAKTGELGGAQKIFSSLQKKDVVIWTTMINGLAMHGRGNEALSMFQTMQKDSSLVPDHITYIGVLFACSHVGLVEEAQKHFRQMTEMYGIVPEREHYGCMVDLLSRAGRFIEAERLVETMSVQPNIAIWGALLNGCQIHENLSVANQVKPRLTELEPDQSGVHVLLSNIYATAGMWEEVNVTRKVMNHRRITKTIGHSSLEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRY9</accession>
    <name>V7BRY9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">S-acyltransferase</fullName>
            <ecNumber evidence="8">2.3.1.225</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Palmitoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G116400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="8"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRY9"/>
    <dbReference type="SMR" id="V7BRY9"/>
    <dbReference type="STRING" id="3885.V7BRY9"/>
    <dbReference type="Gramene" id="ESW19341">
        <property type="protein sequence ID" value="ESW19341"/>
        <property type="gene ID" value="PHAVU_006G116400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1315">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CFVVMHI"/>
    <dbReference type="OrthoDB" id="331948at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019706">
        <property type="term" value="F:protein-cysteine S-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12246">
        <property type="entry name" value="PALMITOYLTRANSFERASE ZDHHC16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="197"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="9">
        <location>
            <begin position="112"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="33454" checksum="C333C8E3D1FD01F4" modified="2014-02-19" version="1">MGSNINLFKLCSALRVLGYFMILLFAAIVALSYYAVVLITWGPLLFRSPLRLPSFFSAFFVLLLFHILLILLTWSYLMVVLNDPGSVPHNWRHHQQLRSDIDLETAPPTPSPAYCSRCQNGKPPRCHHCSICQRCVLKMDHHCIWVVNCVGARNYKYFLLFLLYTLLETTLDCLALVPSFIRFFGGNKNHSLSPGGFAVIFLASILNLAFALSLLCFVVMHISLLLSNTTSVEVHEKKKGVRWMYDLGWKRNFEQVFGTKKALWLFPMFSKEDLDNIPALRGIDFPTRSDVDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSP8</accession>
    <name>V7BSP8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Xanthoxin dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G031600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSP8"/>
    <dbReference type="STRING" id="3885.V7BSP8"/>
    <dbReference type="Gramene" id="ESW20989">
        <property type="protein sequence ID" value="ESW20989"/>
        <property type="gene ID" value="PHAVU_005G031600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AWQLGPK"/>
    <dbReference type="OrthoDB" id="294295at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010301">
        <property type="term" value="F:xanthoxin dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009688">
        <property type="term" value="P:abscisic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42820">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42820:SF1">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE_REDUCTASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="269" mass="28305" checksum="1E069892CBA8989C" modified="2014-02-19" version="1">MSTTSILQASSPTPRLSGKVALVTGGASGIGESIVHLFHTHGAKICIVDVQDNLGKQVCESLDDEANEDVSRAVDFTVDRFGTLDIIVNNAGISGSPCADIRNAELSEFDKVFSINVKGVFHGMKHAARIMIPKKKGSIVSLCSVASVIGGIGPHAYTGSKYAVLGLTKNVAAELGKHGIRVNCVSPYGVATALSMAHLPEDERTEDALAGFRDFTGRVANLEGVELTTQDVANAVLFLASDDARYISGDNLMVDGGFTSANHSLKVFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUM8</accession>
    <name>V7BUM8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G087500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUM8"/>
    <dbReference type="STRING" id="3885.V7BUM8"/>
    <dbReference type="Gramene" id="ESW21644">
        <property type="protein sequence ID" value="ESW21644"/>
        <property type="gene ID" value="PHAVU_005G087500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0656">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTFKRIG"/>
    <dbReference type="OrthoDB" id="1743455at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd20544">
        <property type="entry name" value="CYCLIN_AtCycD-like_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="210"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="439"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="527"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="235"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="249"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="278"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="300"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="319"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="332"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="343"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="469"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="552" mass="63791" checksum="446567EB062AF2E3" modified="2014-02-19" version="1">MDFDPEFPVPSYREREAISHYLKIEQEFMPHRAFYTQSRNAHLRLIAVKTVVQLSEGRVIDAYIPYIAMNYFDRFVSSNPLSVRREAIYNPLRIMRMEFRILSGLNWRMRSVTPFHFLDYYYPTFKRIGGFKRESINEIIVQSQGDVYFTQFRPSEIAMSALLAATYLGYSSRFTFIEESISISRSIKISGSSGKAIFSMTDAVPSTLVEASGSNTQTTQAEEELENEVDLQVQEEGTSSTSQFRNTVMDDDDEEEEPNVAPLARRRRRNSGEEDETEEKKQGEEKETRTLEAISEESGTGEREDKSERTSDEFVEDETGARDDNGKVPSEESVQAESGTSKEIGEAESRAREDKGKAVQEISEVQEENENELRRRKGKGKAVMEIGDEEEENENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGKAVVETRDVEEENENEDLTRRVERPRRGTVRSEVGQAPLQAMNFQLRWPISVRPGEYVRDIDRSLQTHDPYIRTTRRSTSTRGTDSDPDLVSNGCQCTIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUW3</accession>
    <name>V7BUW3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">phosphoenolpyruvate carboxylase</fullName>
            <ecNumber evidence="5">4.1.1.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_005G095300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PEPCase type 1 family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.31" evidence="5"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUW3"/>
    <dbReference type="SMR" id="V7BUW3"/>
    <dbReference type="STRING" id="3885.V7BUW3"/>
    <dbReference type="Gramene" id="ESW21734">
        <property type="protein sequence ID" value="ESW21734"/>
        <property type="gene ID" value="PHAVU_005G095300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPVS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAQYETQ"/>
    <dbReference type="OrthoDB" id="1365747at2759"/>
    <dbReference type="PhylomeDB" id="V7BUW3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008964">
        <property type="term" value="F:phosphoenolpyruvate carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015977">
        <property type="term" value="P:carbon fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
        <property type="term" value="P:leaf development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1440.90:FF:000001">
        <property type="entry name" value="Phosphoenolpyruvate carboxylase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.90">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00595">
        <property type="entry name" value="PEPcase_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021135">
        <property type="entry name" value="PEP_COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022805">
        <property type="entry name" value="PEP_COase_bac/pln-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018129">
        <property type="entry name" value="PEP_COase_Lys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033129">
        <property type="entry name" value="PEPCASE_His_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_kinase-like_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF000584">
        <property type="entry name" value="PRK00009.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30523">
        <property type="entry name" value="PHOSPHOENOLPYRUVATE CARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30523:SF44">
        <property type="entry name" value="PHOSPHOENOLPYRUVATE CARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00311">
        <property type="entry name" value="PEPcase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00150">
        <property type="entry name" value="PEPCARBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00781">
        <property type="entry name" value="PEPCASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00393">
        <property type="entry name" value="PEPCASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0120">Carbon dioxide fixation</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="11">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="601"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW21734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="966" mass="110681" checksum="178A9D519C0A0C35" modified="2014-02-19" version="1">MATRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGEHRPEKLEELGNMLTGLDAGDSIVISKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAMTESDIEETLKRLVTQLKKTPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFELSMWRCTDELRVRAHELHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLASGNSDIPEETTFTKIEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVMDAITKHLGIGSYREWSEEKRQQWLLSELSGKRPLFGHDLPKTEEINDVLETFHVISELPKDNFGAYIISMATAPSDVLAVELLQRECHVKEPLRVVPLFEKLADLETAPASVARLFSIDWYRDRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKDFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTVHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPESPKPAWRALMDEMAVIATQEYRSVVFREPRFVEYFRRATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGTAFKHVIEKDPKNLQMLQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALFDKLLVPEELRPFGESLRAKYEETKTFLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV00</accession>
    <name>V7BV00_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Phytocyanin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G102200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the early nodulin-like (ENODL) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV00"/>
    <dbReference type="SMR" id="V7BV00"/>
    <dbReference type="STRING" id="3885.V7BV00"/>
    <dbReference type="Gramene" id="ESW21827">
        <property type="protein sequence ID" value="ESW21827"/>
        <property type="gene ID" value="PHAVU_005G102200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ81">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TVMSTGH"/>
    <dbReference type="OrthoDB" id="2015640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11019">
        <property type="entry name" value="OsENODL1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000010">
        <property type="entry name" value="Early nodulin-like protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041846">
        <property type="entry name" value="ENL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039391">
        <property type="entry name" value="Phytocyanin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003245">
        <property type="entry name" value="Phytocyanin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021">
        <property type="entry name" value="BLUE COPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021:SF185">
        <property type="entry name" value="EARLY NODULIN-LIKE PROTEIN 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02298">
        <property type="entry name" value="Cu_bind_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51485">
        <property type="entry name" value="PHYTOCYANIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Phytocyanin" evidence="11">
        <location>
            <begin position="4"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="111"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="134"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="154"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00035011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW21827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="164" mass="17891" checksum="9DE104F99B5E5166" modified="2014-02-19" version="1" fragment="single">MACTLFQVGGKDGWVLNPSQDYTHWAQRNRFQVNDTLFFKYRSGSDSVLVVKKEDYDSCNTNNAIQEMDGGDSKFTFVKSGPFFFISGNAQNCQRGQKLTVVVLAVRQNKHTHSLSPSATPSPAEAEIPSENGPSPSSDVSPSGPTSLVPSLPKHSSSTRFRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVY1</accession>
    <name>V7BVY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G009300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVY1"/>
    <dbReference type="SMR" id="V7BVY1"/>
    <dbReference type="STRING" id="3885.V7BVY1"/>
    <dbReference type="Gramene" id="ESW20721">
        <property type="protein sequence ID" value="ESW20721"/>
        <property type="gene ID" value="PHAVU_005G009300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INNMACP"/>
    <dbReference type="OrthoDB" id="5296287at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015145">
        <property type="term" value="F:monosaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17361">
        <property type="entry name" value="MFS_STP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000002">
        <property type="entry name" value="Sugar transport protein 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044778">
        <property type="entry name" value="MFS_STP/MST-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF30">
        <property type="entry name" value="SUGAR TRANSPORT PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="317"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="381"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="422"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="451"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="25"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="516" mass="56516" checksum="62376CC652A06FDD" modified="2014-02-19" version="1">MAVGFAIASENGQRNGKITLYVVLSCMMAGMGGVIFGYDIGTAGGVTSMDSFLKKFFHKVYLKKEDAKVSNYCVFDSQLLTSFTSSLYIAGLVTSFFASYITKAFGRKPSMVAGGAAFLAGTALGGAAFNVYMLIVGRLLLGVGVGFANQAVPLYLSEMALPRLRGATSNGFQLSIGIGALSANLINYGTEKIEGGWGWRVSLAMAAVPASVLTLGALFLPETPNSLIQRNHDHQKAKLLLQRIRGIEDVEAELDDLIKASSSKTNNKQSFKIILKRRYRPQLVMAVAIPFFQQVTGINVIAFYAPLLFRTIGLGESAALLSAVMTGVVGTGSTFISMFMVDKLGRRTLFMIGGIQMFASQCIVGGIMAFHLRDHGGLSKVYSCVVLVMILIYVAGFGWSWGPLGWLVPSEIFPLEIRSVGQSITVAVSFIFTFIVAQTFLSMLCHFRSGIFFFFGGWVVVMTIFVYYLLPETKSVPLEQMEKVWHEHWFWKRIVGEISDTESTNMRNEYDTSRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYN4</accession>
    <name>V7BYN4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G092900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYN4"/>
    <dbReference type="Gramene" id="ESW21706">
        <property type="protein sequence ID" value="ESW21706"/>
        <property type="gene ID" value="PHAVU_005G092900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1907052at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="151" mass="17063" checksum="E83A27316DF8BF05" modified="2014-02-19" version="1">MTEIIQAHFLRKSLESVLQLQTGNEQDKTHKRTMSIDLENVSRFGDDDKEKSVCDKYPSPSTPQLKHGTRLLDDGDFHEQTNFSTEKESGEHNGECKSVEASCENLNAESSPQPIEPEETLIKEKEDFANGSKGERVVSLNLHMVTHHLIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ20</accession>
    <name>V7BZ20_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Wound-responsive family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G108100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ20"/>
    <dbReference type="STRING" id="3885.V7BZ20"/>
    <dbReference type="Gramene" id="ESW21891">
        <property type="protein sequence ID" value="ESW21891"/>
        <property type="gene ID" value="PHAVU_005G108100g"/>
    </dbReference>
    <dbReference type="OMA" id="EGMRTIM"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022251">
        <property type="entry name" value="DUF3774_wound-induced"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33090">
        <property type="entry name" value="DUF3774 DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12609">
        <property type="entry name" value="DUF3774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW21891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="89" mass="9636" checksum="0CD7D495CE0678FB" modified="2014-02-19" version="1">MGSSKRASWTVVVGVGVVEALKDQGLCRWNSGFKSAQQSVKSHVRSLSQAKKLSSSSSAVVSSKMQGEKVKQSEESLRRVMYLSCWGPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZS2</accession>
    <name>V7BZS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G043400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZS2"/>
    <dbReference type="SMR" id="V7BZS2"/>
    <dbReference type="Gramene" id="ESW23394">
        <property type="protein sequence ID" value="ESW23394"/>
        <property type="gene ID" value="PHAVU_004G043400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GLEMECH"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000027">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000065">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1188">
        <property type="entry name" value="FAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="54276" checksum="2DFE93F179276D19" modified="2014-02-19" version="1">MSNPTERKPHAVLIPYPAQGHINPLFGLAKLLHLRGFHITFVHTEYNYKRLLNSRGLKAFDGSQDFHFETIPDGLPLTDEADNVTQDIVSLCKTVGENFLLPFRELLARLNDSAIVGHIPPVTCLVSDCSLTFTTQAAQELALPILLFSPSSANSLLSIMHFRTLSDKGLIPLKDESYLTNGYLDTKLDWIPGLQNFRLKDMPDFIRTTDPNNFMVEYSIGMADSVLKAPAIVINTSDELESEALKALSSMLPSVYPIGPFPSFLNQSPQSHLESLGSNLWKEDTEWLEWLKSKEPNSVVYVNFGSITVMSPEKLLEFAWGLANSKRPFLWIIRPDLVFGGSVILSSEFVNEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTIESICAGVPMVCWPFFADQPTNCRNICNEWGIGIEIDTDVKRKEVEKHVNELMVGEKGKKMRQKVMQLKKKAKEDTRSGGLSFMNLDKVISEVLFKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C069</accession>
    <name>V7C069_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G178500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C069"/>
    <dbReference type="SMR" id="V7C069"/>
    <dbReference type="STRING" id="3885.V7C069"/>
    <dbReference type="Gramene" id="ESW22753">
        <property type="protein sequence ID" value="ESW22753"/>
        <property type="gene ID" value="PHAVU_005G178500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KQPTWRV"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000317">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000305">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF1">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="40"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="329"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="351"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW22753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="366" mass="40796" checksum="63F661425818E2D6" modified="2014-02-19" version="1">MAFCPIFCCGNGSDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYNYMPNLSLLSHLHGQHSAESLLDWNRRMIIAIGSAEGIAYLHLQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSTVKRSINDWALPLACEKKFSELADPKLEGNYVEEELKRVVLIALLCAQSQAEKRPTILEVVELLKGESKDKLVQLENNEIFKNPPAAHTDDENFAAEGSSDFISEEKESKPEVEDKTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0Q6</accession>
    <name>V7C0Q6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G002400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0Q6"/>
    <dbReference type="SMR" id="V7C0Q6"/>
    <dbReference type="STRING" id="3885.V7C0Q6"/>
    <dbReference type="Gramene" id="ESW22880">
        <property type="protein sequence ID" value="ESW22880"/>
        <property type="gene ID" value="PHAVU_004G002400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0724">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="118550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000154">
        <property type="entry name" value="Transcription factor SRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044636">
        <property type="entry name" value="RADIALIS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43952:SF102">
        <property type="entry name" value="(WILD MALAYSIAN BANANA) HYPOTHETICAL PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43952">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="SANT" evidence="6">
        <location>
            <begin position="6"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="5">
        <location>
            <begin position="8"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="79" mass="9028" checksum="6947F1AB2D870A6C" modified="2014-02-19" version="1">MSSSCFSSRWTAEENKAFERALAVHDKDTPNRWCNIAMAVGGKTPEEVKRHYDLLVEDIRRIESGQVPFPTYRNLKDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1P0</accession>
    <name>V7C1P0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Saccharopine dehydrogenase NADP binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G033000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the saccharopine dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1P0"/>
    <dbReference type="Gramene" id="ESW23273">
        <property type="protein sequence ID" value="ESW23273"/>
        <property type="gene ID" value="PHAVU_004G033000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2733">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VHAIANM"/>
    <dbReference type="OrthoDB" id="10268090at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005811">
        <property type="term" value="C:lipid droplet"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051276">
        <property type="entry name" value="Saccharopine_DH-like_oxidrdct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005097">
        <property type="entry name" value="Sacchrp_dh_NADP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12286:SF8">
        <property type="entry name" value="NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12286">
        <property type="entry name" value="SACCHAROPINE DEHYDROGENASE-LIKE OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03435">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="291"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="Saccharopine dehydrogenase NADP binding" evidence="3">
        <location>
            <begin position="8"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="436" mass="47557" checksum="7C58403EB12E2D7E" modified="2014-02-19" version="1">MATSKFDIVILGASGFTGKQVLKEALKFLNNFNSLAIAGRDPSKLAQALNWAARPNPPPPIPILAADTADAASLRELCGRARLLLNCVGPFRLHGEPVVAACVAAGCDYLDITGETEFMERVEREYHAQAVKNETLVVSACGFDSVPAEMGFLFHSRQWVGPARPNRVEAYLGLESEKRIVGNFGTFESAVMAVKDLKEMEQPRVIRVKPKIPGPPPKGEIIEHQKKIGLWGVTLPSADATLVGRTLSTLTESPHGLPGLNESEEMVEKRKAFWSSVKPAHFGVKLGSKSLLHLFGFIMIGIFIGILGRFSFGRWLLLKYPSIFTFGGFSKNGPSEEEIASASFKMWFIGHGFSNEQGNTKPDTEIITRVMGPEMGYVTTPIIMVQCALVLHTQRNNLPKGGVYTPGVVFGPTDLQERLQQNGISFDVISKSSLST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2C8</accession>
    <name>V7C2C8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G048100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the YIF1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2C8"/>
    <dbReference type="STRING" id="3885.V7C2C8"/>
    <dbReference type="Gramene" id="ESW23450">
        <property type="protein sequence ID" value="ESW23450"/>
        <property type="gene ID" value="PHAVU_004G048100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3094">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCLCTGI"/>
    <dbReference type="OrthoDB" id="337750at2759"/>
    <dbReference type="PhylomeDB" id="V7C2C8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030134">
        <property type="term" value="C:COPII-coated ER to Golgi transport vesicle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005793">
        <property type="term" value="C:endoplasmic reticulum-Golgi intermediate compartment"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006888">
        <property type="term" value="P:endoplasmic reticulum to Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005578">
        <property type="entry name" value="Yif1_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14083">
        <property type="entry name" value="YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14083:SF0">
        <property type="entry name" value="YIP1D-INTERACTING FACTOR 1, ISOFORM C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03878">
        <property type="entry name" value="YIF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="150"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="205"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="244"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="269" mass="29903" checksum="BD4D602793B8F10E" modified="2014-02-19" version="1">MYNNVGSQPGVPQPQPSLPPNPFGSAFNVAGSGLIRGGLGAYGGKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVKNKLKVVLLPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVILAGLSLGLHGKFSPEALNLLFIKGLLGWFMQAALLKVTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLGNITINWLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2Z4</accession>
    <name>V7C2Z4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Coenzyme Q-binding protein COQ10 START domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G031400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2Z4"/>
    <dbReference type="Gramene" id="ESW23251">
        <property type="protein sequence ID" value="ESW23251"/>
        <property type="gene ID" value="PHAVU_004G031400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSJN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EWRINMP"/>
    <dbReference type="OrthoDB" id="496281at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018971">
        <property type="entry name" value="DUF1997"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34133">
        <property type="entry name" value="OS07G0633000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34133:SF8">
        <property type="entry name" value="OS07G0633000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09366">
        <property type="entry name" value="DUF1997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="236" mass="27610" checksum="DA7CC0B365215C13" modified="2014-02-19" version="1">MASLFMVPCQHRLLKKLQSHWHPKAAASNFIIRSEKTSTFSFRSNANIPIHEIPGASFDHYMDDKQRVIRDVFSDDKVTTQQINQEEWRINMPPIQCLFVSVKPTADLRLTFKSKGEDYPPHIPHHVTKVLELHFTRWELQGLSALYKDPNQIKLDVRGTVYPERKGKHSWLKNEMEMEITFCASPATAFIPESVLQSGIELIFKTVWDEMKKEFHGKLLQDYNRFKRNKTKKISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C371</accession>
    <name>V7C371_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G038700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C371"/>
    <dbReference type="STRING" id="3885.V7C371"/>
    <dbReference type="Gramene" id="ESW23341">
        <property type="protein sequence ID" value="ESW23341"/>
        <property type="gene ID" value="PHAVU_004G038700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV3U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAYVENM"/>
    <dbReference type="OrthoDB" id="1046782at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000046">
        <property type="entry name" value="Polygalacturonase QRT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039279">
        <property type="entry name" value="QRT3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024535">
        <property type="entry name" value="RHGA/B-epi-like_pectate_lyase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33928">
        <property type="entry name" value="POLYGALACTURONASE QRT3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33928:SF6">
        <property type="entry name" value="POLYGALACTURONASE QRT3-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12708">
        <property type="entry name" value="Pect-lyase_RHGA_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0134">Cell wall</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0964">Secreted</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755317" description="Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein" evidence="3">
        <location>
            <begin position="23"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="domain" description="Rhamnogalacturonase A/B/Epimerase-like pectate lyase" evidence="4">
        <location>
            <begin position="85"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW23341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="52506" checksum="70ACFA7ADF1E9C19" modified="2014-02-19" version="1">MATMSPMWFILLEITCFFVTHAYVENMPLRTLSGVTHEEAMFGLKALKASLTRDSLASTVPSYPPSPTPSPLPSQDLKKPHVYFVTSYGADPTGSSDSSDAFLAAIADAAKGPSEGFLMKDIKDLGGAQINLEGGKYMISKPLQLPLPGVGNFMIHGGSIRASNNFPPDGYLIDMSTSGERNAYSYEYITLKDLLLDSNFRGGGISIKNSLRINIDNCYITHFTSTGILVQGGHETYIRNSFLGQHITAGGDKHERDFSGTGISLQGNDNAITDVVIFSAAIGIMVTGQANTISGVHCYNKASGFGGTGIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDANIVLKSVKGVVNGLNIVDNMFSGLNHGVDMVKLDQSNSPFNQIDQVFVARNVVKGMNLKATVAKMSMQGNGTSWAADFSKLLLFPNLIKHVVYSLIANGNSFPNHVLRNVSQNRVVIETDEAVTASVFVAVDQSIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3F6</accession>
    <name>V7C3F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Stress-induced protein KIN2-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G047200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3F6"/>
    <dbReference type="SMR" id="V7C3F6"/>
    <dbReference type="Gramene" id="ESW23441">
        <property type="protein sequence ID" value="ESW23441"/>
        <property type="gene ID" value="PHAVU_004G047200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8HF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NINYHAG"/>
    <dbReference type="OrthoDB" id="1736743at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039624">
        <property type="entry name" value="LEA1/2/D7/KIN2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34191">
        <property type="entry name" value="LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34191:SF20">
        <property type="entry name" value="LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="65" mass="6883" checksum="6FC556C206894B50" modified="2014-02-19" version="1">MDSQNLSYNAGQAKGQTQEKASNMMDKANNVAQSAQDSMQQAGQQMKEKAQGVADSVKSATGMNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C483</accession>
    <name>V7C483_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G0687001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C483"/>
    <dbReference type="STRING" id="3885.V7C483"/>
    <dbReference type="Gramene" id="ESW23696">
        <property type="protein sequence ID" value="ESW23696"/>
        <property type="gene ID" value="PHAVU_004G0687001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTFS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAVELHE"/>
    <dbReference type="OrthoDB" id="1849062at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004158">
        <property type="entry name" value="DUF247_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170:SF25">
        <property type="entry name" value="BNAA09G04570D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170">
        <property type="entry name" value="BNAC04G53230D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03140">
        <property type="entry name" value="DUF247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="20364" checksum="005262BCA80A3037" modified="2014-02-19" version="1" fragment="single">NIKELKAAGIKLKSSKTRRPKDISFSLGWFYSTLKLPEIVVDDTTAATVLNLIAYEMCPDFHNDYGICSYVSFLDSLIDHPDDVKALRSKRILLNSLGSDEEVANLFNTLSTDLVPDMGKYASLRNQIEMHYNDKCRTWFALGCNTYFSTPWAIIAFHAAVVGLFLTFVQTWYAIHPPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5X9</accession>
    <name>V7C5X9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SWIM-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G119500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5X9"/>
    <dbReference type="STRING" id="3885.V7C5X9"/>
    <dbReference type="Gramene" id="ESW24311">
        <property type="protein sequence ID" value="ESW24311"/>
        <property type="gene ID" value="PHAVU_004G119500g"/>
    </dbReference>
    <dbReference type="OMA" id="YFRTEGH"/>
    <dbReference type="OrthoDB" id="1423537at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006564">
        <property type="entry name" value="Znf_PMZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04434">
        <property type="entry name" value="SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00575">
        <property type="entry name" value="ZnF_PMZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="6">
        <location>
            <begin position="13"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="92"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW24311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="138" mass="16392" checksum="D5161D7F4D152A22" modified="2014-02-19" version="1">MLTIEHRRYPITYTVKLNEWWCDCGEFQALHLPCSHVIVVCSFCHLQVTTFVTSVYSLHNILKAYEVQFNLVRNQDYWSTYTRPNFLPDPIMRRHQSGRPSTQRIRNEMDDSIPNKPKKCSYFRTEGHNRSNCPHTQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6H3</accession>
    <name>V7C6H3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_004G169200g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6H3"/>
    <dbReference type="SMR" id="V7C6H3"/>
    <dbReference type="STRING" id="3885.V7C6H3"/>
    <dbReference type="Gramene" id="ESW24890">
        <property type="protein sequence ID" value="ESW24890"/>
        <property type="gene ID" value="PHAVU_004G169200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WFPIAKR"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000285">
        <property type="entry name" value="RING-H2 finger protein ATL43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ATL42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539:SF1">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ATL42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 18" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <keyword evidence="9 15" id="KW-0863">Zinc-finger</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755821" description="RING-type E3 ubiquitin transferase" evidence="18">
        <location>
            <begin position="21"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="19">
        <location>
            <begin position="114"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="328"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="16">
        <location>
            <begin position="336"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW24890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="48261" checksum="FB1E3A61D3EA3C90" modified="2014-02-19" version="1">MNQLGVILFVLSILFLQVRAQSTAPSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRGSSASLGNQENLPTFVRSRSRFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNPEDHTTFTYSNSLRRLANQSGLGEESNLDIFVQREEEHHGSSRFSVGSSFRKMGKGVKEEELLIQKGAEDSDGNQKGYHKHNHMITISDVVFKHRWSNVSSSDLMFLNSEMLNATSSNRFSNFESNADLMSTPREVVENEQIKNIKEEMERKISFESKVSALNNIKSVSEKDPPFTSDSAGNSSHAPKYVNPGEKRSISEITGVSRFGDLGMKMRVFKDSSSVQNNLKEERMRQIWFPIAKRTAQWFVNRETRSQQSLDKQLPLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8F0</accession>
    <name>V7C8F0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Small ribosomal subunit protein bS1c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">30S ribosomal protein S1, chloroplastic</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_003G118600g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial ribosomal protein bS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8F0"/>
    <dbReference type="STRING" id="3885.V7C8F0"/>
    <dbReference type="Gramene" id="ESW26419">
        <property type="protein sequence ID" value="ESW26419"/>
        <property type="gene ID" value="PHAVU_003G118600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUY8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YDYHFSP"/>
    <dbReference type="OrthoDB" id="412781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd04465">
        <property type="entry name" value="S1_RPS1_repeat_ec2_hs2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05692">
        <property type="entry name" value="S1_RPS1_repeat_hs4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000078">
        <property type="entry name" value="30S ribosomal protein S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000102">
        <property type="entry name" value="30S ribosomal protein S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000162">
        <property type="entry name" value="30S ribosomal protein S1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050437">
        <property type="entry name" value="Ribos_protein_bS1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035104">
        <property type="entry name" value="Ribosomal_protein_S1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10724">
        <property type="entry name" value="30S RIBOSOMAL PROTEIN S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10724:SF7">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN BS1C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00681">
        <property type="entry name" value="RIBOSOMALS1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="S1 motif" evidence="13">
        <location>
            <begin position="98"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="13">
        <location>
            <begin position="186"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="13">
        <location>
            <begin position="263"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="387"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="397"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00069232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00081784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW26419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="413" mass="45307" checksum="D5DA048B08E88F3C" modified="2014-02-19" version="1">MASLALQFTALKCSPLSSSPLSQPSLFTQHRHNHRRSSTPIVNSVALSNAQNKERTKLKKLFEEAYERCRTAPMEGVSFTLEDFTAALEKYDFDSEVGSKVKGTVFYTDNNGAVVDITAKSSAYLPLQEASIRRIKHVQEAGIVAGLREEFLIIGENQADDSLILSLRSIQYDLAWERCRQLQAEDASVKGKIVGVNKGGVVAELEGLRGFVPLSQLSTNSNVEELLERELPLKFVEVDEEQSRLVLSNRKAIAGNQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEDMAQTFRQRIAQAEAMARADMLRFQPESGLTLTGDGILGQFTSDLPEEGLDLSEVPPAEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8Z4</accession>
    <name>V7C8Z4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">protein-disulfide reductase</fullName>
            <ecNumber evidence="1">1.8.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G061100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>[protein]-dithiol + NAD(+) = [protein]-disulfide + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18749"/>
            <dbReference type="Rhea" id="RHEA-COMP:10593"/>
            <dbReference type="Rhea" id="RHEA-COMP:10594"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.8.1.8"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[protein]-dithiol + NADP(+) = [protein]-disulfide + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18753"/>
            <dbReference type="Rhea" id="RHEA-COMP:10593"/>
            <dbReference type="Rhea" id="RHEA-COMP:10594"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.8.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the nucleoredoxin family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.8" evidence="1"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8Z4"/>
    <dbReference type="SMR" id="V7C8Z4"/>
    <dbReference type="STRING" id="3885.V7C8Z4"/>
    <dbReference type="Gramene" id="ESW25735">
        <property type="protein sequence ID" value="ESW25735"/>
        <property type="gene ID" value="PHAVU_003G061100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2501">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WSYRCDE"/>
    <dbReference type="OrthoDB" id="409136at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03009">
        <property type="entry name" value="TryX_like_TryX_NRX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046349">
        <property type="entry name" value="C1-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004146">
        <property type="entry name" value="DC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052259">
        <property type="entry name" value="Nucleoredoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045870">
        <property type="entry name" value="TryX_NRX_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13871:SF104">
        <property type="entry name" value="NUCLEOREDOXIN 1 ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13871">
        <property type="entry name" value="THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03107">
        <property type="entry name" value="C1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13905">
        <property type="entry name" value="Thioredoxin_8"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57889">
        <property type="entry name" value="Cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Thioredoxin" evidence="8">
        <location>
            <begin position="13"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="8">
        <location>
            <begin position="322"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00047388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="571" mass="64238" checksum="E747A42AF378EE2B" modified="2014-02-19" version="1">MAASADNTHDVVSLLSSPQRDFLLRNNGDQVKIESLKGKKLGVYFSASWCGPCRKFTPTLVEAYNEVVSKGDFEVVFASADEDEESFKGYFSEMPWLAIPFSDSETRSRLDELFHVRGIPHLVILEETGKVVTEDGVDIVREYGVEAYPFTSARIQELRAQEEEARRNQSVRSLLISPSRDFVISSDGNKILVSELEGKTVGLYFSLNSFQRSSEFTPKLVDVYEKLKAKGENFEVVLIPLDEDEESFKKVLGSVPWLSLPFKDKFCGKLAQYFELSTLPTLVIIGPDGKTLNPNVAEAIEDHGVDAYPFTPEKFVELDEILKAREAAQTLESVLVSEDRGFVIGKDGVQIPVSELKGKVVLLYFSAHWCPPCRAFLPKLVDAYQEIKEKGNALEVVFISSDKDQASFDEFFGGMPWLALPFGDSRKKFLSRKFKVTGIPKLVAIGSSGQTSTTEARDLVLQYGARAYPFTEEKIQDIEAEEEETAKGWPEKVTHETHEHELVLTRRKVYYCDGCNEQGYAWSYYCGECDFDLHPKCVLEEDKGSKDDTDVKEEDKSKDGWVCEGEVCKKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8Z8</accession>
    <name>V7C8Z8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">VOC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G134400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8Z8"/>
    <dbReference type="SMR" id="V7C8Z8"/>
    <dbReference type="STRING" id="3885.V7C8Z8"/>
    <dbReference type="Gramene" id="ESW26619">
        <property type="protein sequence ID" value="ESW26619"/>
        <property type="gene ID" value="PHAVU_003G134400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RKPE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCCSAMA"/>
    <dbReference type="OrthoDB" id="5371818at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd07245">
        <property type="entry name" value="VOC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="entry name" value="2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050383">
        <property type="entry name" value="GlyoxalaseI/FosfomycinResist"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21366">
        <property type="entry name" value="GLYOXALASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21366:SF22">
        <property type="entry name" value="VOC DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="86"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23032" checksum="58813F6613DE5010" modified="2014-02-19" version="1">MMNCCSAMASLLKAPSFLSPLNQKLNHVSLSPTTTNLQSKFDHAGVRNGRWHIPSMAIKAQASVEGDVLDKESVSINEESDYGVVNMHHVGILCESLERSLDFYQNVLGLKINEARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKADIPYTLSRSGRPAIFTRDPDANALEFTQIDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9X2</accession>
    <name>V7C9X2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G163800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9X2"/>
    <dbReference type="Gramene" id="ESW26987">
        <property type="protein sequence ID" value="ESW26987"/>
        <property type="gene ID" value="PHAVU_003G163800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0752">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRQYSNM"/>
    <dbReference type="OrthoDB" id="270584at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002067">
        <property type="entry name" value="MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24089">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00926">
        <property type="entry name" value="MITOCARRIER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="6">
        <location>
            <begin position="91"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="6">
        <location>
            <begin position="206"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="331" mass="35215" checksum="961149920465B311" modified="2014-02-19" version="1" fragment="single">CPTSFFASVGQAGFGSGISPNPPAASTRDSGTKPSLVYSSSKYVLMPEAGLRSTGSQGLLSGEAVEGDEEGHGMKSEKKMKGFKLKFKIGNPSLRRLMSGAIAGVVSRTAVASLETIRTHLMVGSCGHTSLQVFQSIMETDGWKGLFRGNFVNIIRVAPSKAIEGTHTQDDITSTSEIMRVPVEPLFAYDTVKKQLSPKSGEQPKIPIPASSIAGAVAGVSSTLCTYPLELLKTRLTVQGLTPSLIGVIPYAATNYLAYDTLRKAYKKGFSKEDIGNVMTLVIGSAVLWSLNLLIYNQGLGPSCLKLVPAAGISFMCYEACKRILVANEQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA97</accession>
    <name>V7CA97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Band 7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G069700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA97"/>
    <dbReference type="SMR" id="V7CA97"/>
    <dbReference type="STRING" id="3885.V7CA97"/>
    <dbReference type="Gramene" id="ESW25841">
        <property type="protein sequence ID" value="ESW25841"/>
        <property type="gene ID" value="PHAVU_003G069700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2620">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WICFENC"/>
    <dbReference type="OrthoDB" id="434619at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd03407">
        <property type="entry name" value="SPFH_like_u4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.479.30:FF:000013">
        <property type="entry name" value="Hypersensitive-induced response protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="entry name" value="Band 7 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050710">
        <property type="entry name" value="Band7/mec-2_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327:SF54">
        <property type="entry name" value="BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327">
        <property type="entry name" value="STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="Band 7/SPFH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0519">Myristate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Band 7" evidence="5">
        <location>
            <begin position="5"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="118"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW25841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="286" mass="31570" checksum="CC5667D481202BF0" modified="2014-02-19" version="1">MGLALGCLQVEQSTVAIKEVFGKYDDVLEPGFHCVPWFFGTQIAGYLSLRVQQLDVHCETKTKDNVFVTVVASIQYRALAEKAVDAFYKLSNTREQIQAYVFDVIRACVPKMDLDSSFEQKKEIARAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKRAMNEINAAARLRVAANEKAEAEKILQIKKAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTLKEIGASSKSNSVFVPHGPGAVRDIASQCRDGLLQGSMARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBU4</accession>
    <name>V7CBU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">IBH1-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G151300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBU4"/>
    <dbReference type="SMR" id="V7CBU4"/>
    <dbReference type="STRING" id="3885.V7CBU4"/>
    <dbReference type="Gramene" id="ESW26823">
        <property type="protein sequence ID" value="ESW26823"/>
        <property type="gene ID" value="PHAVU_003G151300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYWW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARWPRAI"/>
    <dbReference type="OrthoDB" id="1922093at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11444">
        <property type="entry name" value="bHLH_AtIBH1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044549">
        <property type="entry name" value="bHLH_AtIBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044660">
        <property type="entry name" value="IBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059002">
        <property type="entry name" value="IBH1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124">
        <property type="entry name" value="TRANSCRIPTION FACTOR IBH1-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124:SF5">
        <property type="entry name" value="TRANSCRIPTION FACTOR IBH1-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26576">
        <property type="entry name" value="IBH1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="IBH1-like N-terminal" evidence="6">
        <location>
            <begin position="5"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="71"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF26576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="20641" checksum="4903083543062EA5" modified="2014-02-19" version="1">MRNINSVKQEFLKKWIWCLRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKNSSNKVLTAHVPGSSPPQRVRKSSTNYSHSTRIRSCRRNRAVYRPRDRVVASFIAKKLVQKRTRRLKSLLPGGEFMDDASLVEETLDYVQSLRAQVEVMRCLVTASELMILNPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE48</accession>
    <name>V7CE48_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G212700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE48"/>
    <dbReference type="SMR" id="V7CE48"/>
    <dbReference type="STRING" id="3885.V7CE48"/>
    <dbReference type="Gramene" id="ESW27560">
        <property type="protein sequence ID" value="ESW27560"/>
        <property type="gene ID" value="PHAVU_003G212700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZJ7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRHPMYH"/>
    <dbReference type="OrthoDB" id="1932364at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045277">
        <property type="entry name" value="DRE1A-I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839:SF85">
        <property type="entry name" value="AP2_ERF DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="13"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW27560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="178" mass="19309" checksum="E811BD8930440BAE" modified="2014-02-19" version="1">MASSSSSSKRHPLYHGIRCRGGKWVTEIREPRKTNRIWLGTFLTPEMAAAAYDVAALALKGGEAVLNFPDSIGRYPVPASKSPADIRSAAIAAAELMKPEASHNNANAVAQSDNTEGDGYYNVAAPLNETEFVDEEAIFSMPSLLIDMAEGMLLTPPRMSSPSDYWIENSGGENLWNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFP5</accession>
    <name>V7CFP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Serine carboxypeptidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G2599000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFP5"/>
    <dbReference type="Gramene" id="ESW28110">
        <property type="protein sequence ID" value="ESW28110"/>
        <property type="gene ID" value="PHAVU_003G2599000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2182">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1735038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008239">
        <property type="term" value="F:dipeptidyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070008">
        <property type="term" value="F:serine-type exopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008758">
        <property type="entry name" value="Peptidase_S28"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010">
        <property type="entry name" value="PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010:SF115">
        <property type="entry name" value="SERINE CARBOXYPEPTIDASE S28 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05577">
        <property type="entry name" value="Peptidase_S28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="12192" checksum="6425EFB918AB7288" modified="2014-02-19" version="1" fragment="single">MTMRQKDWVIATALTLLLFLSFPTFSYGLVPPRTLLNKLSESKYLTNQALWFDQTLDHFSPYDHRQFRQRYYEFLDYFRIPDGPIFLLIGGEGTSNGIANDYLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGE1</accession>
    <name>V7CGE1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G250000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGE1"/>
    <dbReference type="STRING" id="3885.V7CGE1"/>
    <dbReference type="Gramene" id="ESW27991">
        <property type="protein sequence ID" value="ESW27991"/>
        <property type="gene ID" value="PHAVU_003G250000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ4Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISPVMMM"/>
    <dbReference type="OrthoDB" id="843671at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025322">
        <property type="entry name" value="PADRE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33052">
        <property type="entry name" value="DUF4228 DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14009">
        <property type="entry name" value="PADRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="173" mass="18819" checksum="A70CB91DC30544BC" modified="2014-02-19" version="1">MGNCFYSQITKMPTAKVVVHDGRMEEFSYPVKVSYLLQLYPTCFICDSDEISFDHVVTAVHHDHELKLGQLYFALPLNRLKRHLPPPDMAALAVVASSALARCAGDKCGSRRQQNLLLPCEGNAKPGGKVTADSLDVSAAVDNRVARKGMNRKGGVRGRGKFTATLSSIAEQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHA1</accession>
    <name>V7CHA1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Pyruvate dehydrogenase E1 component subunit alpha</fullName>
            <ecNumber evidence="8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G077600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>N(6)-[(R)-lipoyl]-L-lysyl-[protein] + pyruvate + H(+) = N(6)-[(R)-S(8)-acetyldihydrolipoyl]-L-lysyl-[protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Tetramer of 2 alpha and 2 beta subunits.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="8"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHA1"/>
    <dbReference type="SMR" id="V7CHA1"/>
    <dbReference type="STRING" id="3885.V7CHA1"/>
    <dbReference type="Gramene" id="ESW29524">
        <property type="protein sequence ID" value="ESW29524"/>
        <property type="gene ID" value="PHAVU_002G077600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0225">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GLRINGM"/>
    <dbReference type="OrthoDB" id="10256198at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:pyruvate decarboxylation to acetyl-CoA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02000">
        <property type="entry name" value="TPP_E1_PDC_ADC_BCADC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.970:FF:000013">
        <property type="entry name" value="Pyruvate dehydrogenase E1 component subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.970">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050642">
        <property type="entry name" value="PDH_E1_Alpha_Subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017597">
        <property type="entry name" value="Pyrv_DH_E1_asu_subgrp-y"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03182">
        <property type="entry name" value="PDH_E1_alph_y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516:SF60">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11516">
        <property type="entry name" value="PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="Thiamin diphosphate-binding fold (THDP-binding)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Dehydrogenase E1 component" evidence="10">
        <location>
            <begin position="66"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="294"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="303"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW29524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="391" mass="42794" checksum="FA54012E0A9B03BA" modified="2014-02-19" version="1">MALSTLSRRGLGSTLFKPLSAAVSSRSISSDAPLTIETSVPFTAHNCEAPSRAVTTSSSELLSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITRKDCIITAYRDHCTFLGRGGSLLEIFAELMGRKEGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPVPDPSELFSNVYVKGLGVEAFGVDRKVLRATLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKW8</accession>
    <name>V7CKW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">V-type proton ATPase proteolipid subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G111000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Vacuole membrane</location>
            <topology evidence="2 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the V-ATPase proteolipid subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKW8"/>
    <dbReference type="STRING" id="3885.V7CKW8"/>
    <dbReference type="Gramene" id="ESW29935">
        <property type="protein sequence ID" value="ESW29935"/>
        <property type="gene ID" value="PHAVU_002G111000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0232">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QCEGPEN"/>
    <dbReference type="OrthoDB" id="1690601at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033179">
        <property type="term" value="C:proton-transporting V-type ATPase, V0 domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005774">
        <property type="term" value="C:vacuolar membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18175">
        <property type="entry name" value="ATP-synt_Vo_c_ATP6C_rpt1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18176">
        <property type="entry name" value="ATP-synt_Vo_c_ATP6C_rpt2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.610:FF:000003">
        <property type="entry name" value="V-type proton ATPase proteolipid subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.610">
        <property type="entry name" value="lithium bound rotor ring of v- atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000245">
        <property type="entry name" value="ATPase_proteolipid_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011555">
        <property type="entry name" value="ATPase_proteolipid_su_C_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01100">
        <property type="entry name" value="V_ATP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10263">
        <property type="entry name" value="V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00122">
        <property type="entry name" value="VACATPASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="F1F0 ATP synthase subunit C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="9 11" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 11" id="KW-0813">Transport</keyword>
    <keyword evidence="5 11" id="KW-0926">Vacuole</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="204"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="V-ATPase proteolipid subunit C-like" evidence="13">
        <location>
            <begin position="91"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="V-ATPase proteolipid subunit C-like" evidence="13">
        <location>
            <begin position="171"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="18"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="22"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW29935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="25342" checksum="EAEEEDA8210B181A" modified="2014-02-19" version="1">MDVWPKLVLQCEGPENVFGVSDNDRGGREGGFKKLPRGKKRGREERRENFSNNKSNINRSHSRLPKAKIQRRKERMVDFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL64</accession>
    <name>V7CL64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Peroxisomal adenine nucleotide carrier 1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G086400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Peroxisome membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL64"/>
    <dbReference type="SMR" id="V7CL64"/>
    <dbReference type="STRING" id="3885.V7CL64"/>
    <dbReference type="Gramene" id="ESW29631">
        <property type="protein sequence ID" value="ESW29631"/>
        <property type="gene ID" value="PHAVU_002G086400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0769">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PLEMINT"/>
    <dbReference type="OrthoDB" id="446044at2759"/>
    <dbReference type="PhylomeDB" id="V7CL64"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005778">
        <property type="term" value="C:peroxisomal membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015217">
        <property type="term" value="F:ADP transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005347">
        <property type="term" value="F:ATP transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007031">
        <property type="term" value="P:peroxisome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.40.10:FF:000044">
        <property type="entry name" value="Peroxisomal adenine nucleotide carrier 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002067">
        <property type="entry name" value="MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045900">
        <property type="entry name" value="Peroxisomal_Ade_carrier"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46650:SF4">
        <property type="entry name" value="PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46650">
        <property type="entry name" value="PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00926">
        <property type="entry name" value="MITOCARRIER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0050">Antiport</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="5"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="104"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="202"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004585"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW29631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="318" mass="34776" checksum="6BF6817FB6F8369D" modified="2014-02-19" version="1">MNVDLESLAEATSGAIGSLISTTFLYPLDTCKTKYQADARSNGRTRYRNLTDVLLEAISNGQVLSLYQGIGTKNLQSFISQFVYFYGYSYFKRLYLDKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQSKADKGTSPESLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSDEANSKTKIKSQKTVSNVLYGIWKREGIVGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILALKRYLLLPTRRVKNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMM1</accession>
    <name>V7CMM1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Cysteine proteinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G239300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMM1"/>
    <dbReference type="SMR" id="V7CMM1"/>
    <dbReference type="STRING" id="3885.V7CMM1"/>
    <dbReference type="Gramene" id="ESW31452">
        <property type="protein sequence ID" value="ESW31452"/>
        <property type="gene ID" value="PHAVU_002G239300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPYGVCA"/>
    <dbReference type="OrthoDB" id="10253408at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008234">
        <property type="term" value="F:cysteine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02248">
        <property type="entry name" value="Peptidase_C1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000177">
        <property type="entry name" value="Cysteine proteinase RD21A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013128">
        <property type="entry name" value="Peptidase_C1A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000668">
        <property type="entry name" value="Peptidase_C1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039417">
        <property type="entry name" value="Peptidase_C1A_papain-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013201">
        <property type="entry name" value="Prot_inhib_I29"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12411">
        <property type="entry name" value="CYSTEINE PROTEASE FAMILY C1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08246">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00112">
        <property type="entry name" value="Peptidase_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00848">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00645">
        <property type="entry name" value="Pept_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0788">Thiol protease</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5018602134" description="Cysteine proteinase" evidence="8">
        <location>
            <begin position="25"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Cathepsin propeptide inhibitor" evidence="10">
        <location>
            <begin position="50"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase C1A papain C-terminal" evidence="9">
        <location>
            <begin position="139"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW31452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="368" mass="40696" checksum="CEBAF2FFE1F6BD2E" modified="2014-02-19" version="1">MSSKMTKLFLLFLVLVSFICLSFAFPSAYTIHGRDKLDKFSSEEEVLQLFQVWQKEHGREYGNPEEKAKRFHIFQRNLRYINEMNAKRKSGTQHRLGLNKFADTSPEEFAETYLKEIDMPSNLGSRKMQKDDDDDCENLPDSVDWREKGAVTEVRDQGECQSHWAFSVTGAIEGINKIVSGDLVTLSAQELVDCDPSSHGCAGGFYFNAFGYVINNGGIDTEANYPYTAKNGSCKVNANKAVSIDNLIVVDGTEKGLLCRVSKQPVSVSIDATGLQFYTGGVYGGDNCSKDSRSVTLVCLIVGYGSVGGEDYWIVKSSWGKDWGEEGYLLMKRNVSEEWPYGVCAINAAAGYPIKRVSSSSPLLSAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMR2</accession>
    <name>V7CMR2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">glucose-6-phosphate 1-epimerase</fullName>
            <ecNumber evidence="3 5">5.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G162300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>alpha-D-glucose 6-phosphate = beta-D-glucose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:16249"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="ChEBI" id="CHEBI:58247"/>
            <dbReference type="EC" id="5.1.3.15"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glucose-6-phosphate 1-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.15" evidence="3 5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMR2"/>
    <dbReference type="SMR" id="V7CMR2"/>
    <dbReference type="STRING" id="3885.V7CMR2"/>
    <dbReference type="Gramene" id="ESW30550">
        <property type="protein sequence ID" value="ESW30550"/>
        <property type="gene ID" value="PHAVU_002G162300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1594">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INGIRHF"/>
    <dbReference type="OrthoDB" id="1659429at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047938">
        <property type="term" value="F:glucose-6-phosphate 1-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09020">
        <property type="entry name" value="D-hex-6-P-epi_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025532">
        <property type="entry name" value="G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11122">
        <property type="entry name" value="APOSPORY-ASSOCIATED PROTEIN C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11122:SF31">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE 1-EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016020">
        <property type="entry name" value="PHexose_mutarotase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="Galactose mutarotase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR016020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR016020-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW30550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="319" mass="35675" checksum="CDF9A8C833FF9987" modified="2014-02-19" version="1">MKNSESTSKAGEGAQSSPAKSEKKPLDPGVVELINDKNGIPQLILKNGDASATISLLGAQVLSWKTKATGELLFVSKKAIFDPPRAVRGGIPICFPQFGNRGALEQHGFARNRIWTIEKDPPHLSGNFSAKVYIDLLLKPYKEDSKTWPHSFEFRLRISLTADGILNLTSRIRNVGSKNFSFCIGYRTYLSVSDVSEVRIEGLETEYYLDNLLQKQQFTEQGGALTFESEVDRIYINSNNMVAVLDHQKRRTFVIRKDGLPDVVIWNPWDKKSKSIVDLGDEEYKQMLCVDGAAVETPIPLKPGEEWKGRLELSLLQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNX8</accession>
    <name>V7CNX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DDT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G2778000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNX8"/>
    <dbReference type="SMR" id="V7CNX8"/>
    <dbReference type="STRING" id="3885.V7CNX8"/>
    <dbReference type="Gramene" id="ESW31902">
        <property type="protein sequence ID" value="ESW31902"/>
        <property type="gene ID" value="PHAVU_002G2778000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW31903">
        <property type="protein sequence ID" value="ESW31903"/>
        <property type="gene ID" value="PHAVU_002G2778000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW31904">
        <property type="protein sequence ID" value="ESW31904"/>
        <property type="gene ID" value="PHAVU_002G2778000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1245">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVEVHCA"/>
    <dbReference type="OrthoDB" id="332390at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018501">
        <property type="entry name" value="DDT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053271">
        <property type="entry name" value="DDT_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028942">
        <property type="entry name" value="WHIM1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028941">
        <property type="entry name" value="WHIM2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013136">
        <property type="entry name" value="WSTF_Acf1_Cbp146"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15546">
        <property type="entry name" value="BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15546:SF2">
        <property type="entry name" value="DDT DOMAIN-CONTAINING PROTEIN DDB_G0282237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02791">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10537">
        <property type="entry name" value="WAC_Acf1_DNA_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15612">
        <property type="entry name" value="WHIM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15613">
        <property type="entry name" value="WSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00571">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50827">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51136">
        <property type="entry name" value="WAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WAC" evidence="7">
        <location>
            <begin position="22"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="DDT" evidence="6">
        <location>
            <begin position="303"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="237"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="454"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="454"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="515"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="543"/>
            <end position="580"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="711" mass="82601" checksum="F103154E3145F08A" modified="2014-02-19" version="1">MPLLRRKPFSLAEPPEELKPDEPVYQIRFTKEIFRDYPDYLKRLNLYRQRLWMCKVTGKTGLTYEEAMVSEQHATEKVQQFPKELMTTALGIIQYSMLPLKDLADSIGEQLQKRLFVGAELHGKKDDGVHPCRILKVIPKGVNTFCYEVAWLDKNKNITQQAELCAEDLVHKKPLFSRNILKSFIRESTYRNAPWVLHDELAKNHGISIDIPEELRRRVFYRDGLLICSKKRKNEESLEDTDNGKRKKSDGAQVDDSCEEKGNARPKNEAIKYPIDDLLVKPGPGDPAFTDRPSLSKDFNIPMSCVGDLLMVWDLLNSFGRLLHLLPYSLEDFENAICHKDSNVVLLVESHAALFRFLIKDDDEYSSAVKSRKLKSKITVNNWTEYLCYFLEVINIPELRHHEATIKRGHYGLVDVSAKLEILSELVNQALETAVFREKLDEIIEQRQALGASRRGEALESGRRRREEKERLKAESESNGFVDGLLNGAKVPRNNNHGIQNGDMGEKSLVGIEPSEQNSQLDRSEITPQNPASKKTPKQLNSELKEPTKNGKELSRKESPKQSKADKEDPSEKNSEEQRKEYFEREMEKRFIRRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSSKEEIDALMSSLNCKGERERALRKQLKKYYTKICSELHKRSKDLMHRITDESVLRRSTRVRAPPRQNPANAFLRYGNKWKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV03</accession>
    <name>V7CV03_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PUM-HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G113100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
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        <property type="project" value="TreeGrafter"/>
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        <property type="entry name" value="PUMILIO HOMOLOG 6, CHLOROPLASTIC"/>
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    </dbReference>
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        <property type="entry name" value="RNA BINDING PROTEIN PUMILIO-RELATED"/>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="6"/>
    </dbReference>
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    </dbReference>
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    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="PUM-HD" evidence="5">
        <location>
            <begin position="1"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="4">
        <location>
            <begin position="39"/>
            <end position="74"/>
        </location>
    </feature>
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        <location>
            <begin position="75"/>
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        </location>
    </feature>
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        <location>
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            <end position="147"/>
        </location>
    </feature>
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            <end position="183"/>
        </location>
    </feature>
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            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50303"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW33964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
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        </source>
    </evidence>
    <sequence length="260" mass="29854" checksum="3CB5A0A032389087" modified="2014-02-19" version="1" fragment="single">FPIYSVCWIELSFHIYLNFVPVQALEVINLEQKAQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTKNIDFIISAFRGQVAILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILDSVLTLAQDQYGNYVAQHVLERGKSQERSQIISKLSGHIVQLSQHKFASNVVEKCLEYGDSTERQLLIAEIVGHDKQHDNLLTMMKDQFANYVIQRVLEICSENQRAMLLSRIRLHAHALKKYTYGKHIVARFEQLLGEESQTPGP</sequence>
</entry>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
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            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
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            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds amino acids.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW33191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_001G050200g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096:SF50">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR2"/>
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    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED"/>
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    </dbReference>
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    </dbReference>
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            <begin position="55"/>
            <end position="135"/>
        </location>
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        </location>
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            <end position="22"/>
        </location>
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        <location>
            <begin position="10"/>
            <end position="22"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW33191.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="43236" checksum="B964AD9E3D7278C5" modified="2014-02-19" version="1">MQAIGKSRASPPSQQQQSNINNNNINSIITTMTNYKTYCKKLIPLLSNSPEQYTAIEMTGTDRPGLFSEISAALVDLHCNIVEVHAWSHNARLACVAYISDQSTDSAIEDPSRLSSIEDHLTTVLRATTNPIGDGTLSYPDVKTSELLGEGNMTSVERRLHQLMLSVRDFEAPSSPKEMKGRKRMVTIESCEQKGYSIVSIECKDRPRLMFDTVCTLTDMEYVIFHASITSHGSYAFQEYFIRHVDGYALDTACEKERVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLVVVRADVETHGEKAVNAFYVKDVSGNEVDVEYFTNSVKREMGPILTLHVKNDTTRRKTTSPKRSPSLSFGGMLRSRIERLSHGFII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYN5</accession>
    <name>V7CYN5_PHAVU</name>
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        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G221500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYN5"/>
    <dbReference type="SMR" id="V7CYN5"/>
    <dbReference type="Gramene" id="ESW35277">
        <property type="protein sequence ID" value="ESW35277"/>
        <property type="gene ID" value="PHAVU_001G221500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AEEIKWS"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000047">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000221">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051953">
        <property type="entry name" value="Plant_SW-associated_TFs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997">
        <property type="entry name" value="MYB DOMAIN PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997:SF75">
        <property type="entry name" value="MYB DOMAIN PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="9"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="66"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="122"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="143"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW35277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="441" mass="49298" checksum="25AA94D3A0A194E3" modified="2014-02-19" version="1">MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENSIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHQPLYEVENDKDKPLTADRSNQKASNEVSVVEPPKQKPITTTTTTSMPMDRYPLEVSPTSKISSGNNNSSSTLDRFGTCHDNNSSITSSDMMGMGYFPFQHLNYGPNMGLTTATTNNTPLCFIPSSTSSQMMSELNSTMLHSVFSTHVKPTVSLQSNNNNPSSIFSDGVQNWEGSTFSNNNNNNASKSNGSSSCSIQLQSSTNFLDHGSTITWGLQAESATKADNKDAHSSHVVPLQSEQEDIKWSEYLNNTPFFLGTTVQQHQTTHSLYSDEVKPETAFIADESSTSWHHSQHFQPSDIYSKDLQRFSVAFGQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0Q5</accession>
    <name>V7D0Q5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G206300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0Q5"/>
    <dbReference type="SMR" id="V7D0Q5"/>
    <dbReference type="STRING" id="3885.V7D0Q5"/>
    <dbReference type="Gramene" id="ESW35095">
        <property type="protein sequence ID" value="ESW35095"/>
        <property type="gene ID" value="PHAVU_001G206300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1188">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHEKTDK"/>
    <dbReference type="OrthoDB" id="25131at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0040008">
        <property type="term" value="P:regulation of growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010029">
        <property type="term" value="P:regulation of seed germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039328">
        <property type="entry name" value="WDR89"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22889">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 89"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22889:SF0">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 89"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="73"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="42649" checksum="0E13A9DBBE3F6675" modified="2014-02-19" version="1">MESSAAMDVEEQPSPNPTNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSTNAVKLYSPMAGQYFGECKGHTATINQILFSGTSHHQVLCSCSSDGTVRAWDTRTFQQVSCINAGSSQEVFSFSLGGTSGNLVAAGCKSQILFWDWRNMKQIACLEDSHVEDVTQVHFVPNEQGKLISASVDGLICTFDTTGDINDDDHLDSVINMGTSIAKVGIFGESYQKLWCLTHIETLGIWNWKDGRNEGNFSDARTLASESWNLDHVDYFIDCHYYRESEKLWVIGGTNAGTMGYFPVNYKGVATIGAAEAILEGGHTSVVRSVLPMSKIHSNSPTQGIFGWTGGEDGRLCCWLSDHSSESNRSWISSTLITRPEKTRKKNRHQPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7D191</accession>
    <name>V7D191_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G235100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D191"/>
    <dbReference type="STRING" id="3885.V7D191"/>
    <dbReference type="Gramene" id="ESW35438">
        <property type="protein sequence ID" value="ESW35438"/>
        <property type="gene ID" value="PHAVU_001G235100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QCCEVME"/>
    <dbReference type="OrthoDB" id="421979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000006">
        <property type="entry name" value="Fringe-related protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006740">
        <property type="entry name" value="DUF604"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10811">
        <property type="entry name" value="FRINGE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04646">
        <property type="entry name" value="DUF604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="490" mass="56127" checksum="7CC0DC91FEACED51" modified="2014-02-19" version="1">MSHNRLEPGHESPLKASRLSFFPERLGDMVVLLIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIHTVQNTSVIDSGPTNISHILFGIAGSSNTWHDRSNYSKLWWKPNTTRGFVWLDKKPEILHDDMLLPYQISQGWRRFQYVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGGSSESVEQDVMHSYNMAFGGGGFAISYALAAQLDKMMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREVGFHQLDIRGDPYGLLAAHPLVPLLSLHHLGQLNSLFPNQTQFHSMEKLISAYDADPARIVQQSFCYDHKHRWSISISWGYTIQIYPLLLVAADLQMPLQTFKTWRSWKDGPFTFNTRPMSSDPCQKPAVFFLDEVTKVGKSGSVTIYKRHEGNEGKCTRKDINNVEVERIRVSALKLDPEYWKNVLRRHCCQLLWGGSIKNGSMHIRIRKCRPQETVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7D293</accession>
    <name>V7D293_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Importin subunit alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G226400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the importin alpha family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D293"/>
    <dbReference type="SMR" id="V7D293"/>
    <dbReference type="STRING" id="3885.V7D293"/>
    <dbReference type="Gramene" id="ESW35331">
        <property type="protein sequence ID" value="ESW35331"/>
        <property type="gene ID" value="PHAVU_001G226400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0166">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDNNMQF"/>
    <dbReference type="OrthoDB" id="29145at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061608">
        <property type="term" value="F:nuclear import signal receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006606">
        <property type="term" value="P:protein import into nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.690:FF:000002">
        <property type="entry name" value="Importin subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000040">
        <property type="entry name" value="Importin subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.690">
        <property type="entry name" value="Importin-alpha, importin-beta-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032413">
        <property type="entry name" value="Arm_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002652">
        <property type="entry name" value="Importin-a_IBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036975">
        <property type="entry name" value="Importin-a_IBB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024931">
        <property type="entry name" value="Importin_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23316">
        <property type="entry name" value="IMPORTIN ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00514">
        <property type="entry name" value="Arm"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16186">
        <property type="entry name" value="Arm_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01749">
        <property type="entry name" value="IBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005673">
        <property type="entry name" value="Importin_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50176">
        <property type="entry name" value="ARM_REPEAT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51214">
        <property type="entry name" value="IBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5 7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="IBB" evidence="9">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="117"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="160"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="244"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="6">
        <location>
            <begin position="371"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR005673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW35331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="531" mass="58799" checksum="8A0487A73FC72934" modified="2014-02-19" version="1">MSYKPTANSRIEVRRIRYKVAVDADEGRRRREDTMVEIRKNRREESLQKKRREGLQSQQIPASAHSTLIEKKLELLPAMVAGVWTNDNNMQFEATTQFRKMLSIERSPPIEEVIQAGVVPRFVEFLMREDFPMLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVQLLASPSDDVREQAVWALGNVAGDSPKCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALANLIHSNDDEVLTDACWALSYLSDGANDKIQGVIETGVCSRLVELLTHTSPSVLIPALRTVGNIVTGDDKQTQVIINHQVLPHLLNLLTKNYKKSIKKEACWTISNITAGNKQQIQDVIDAGLIAPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQVKFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGESEKNVSNADGVNLYGAMIDDVEGLEKIENLQSHDNTEIYEKAVKILETYWMEEDDETVPPGDASQGFNFGGHKFPSVPSGGFNFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2P2</accession>
    <name>V7D2P2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">F-box associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G264900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2P2"/>
    <dbReference type="Gramene" id="ESW35790">
        <property type="protein sequence ID" value="ESW35790"/>
        <property type="gene ID" value="PHAVU_001G264900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1433187at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050796">
        <property type="entry name" value="SCF_F-box_component"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672">
        <property type="entry name" value="BNACNNG10540D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672:SF13">
        <property type="entry name" value="F-BOX PROTEIN CPR30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW35790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="374" mass="42589" checksum="B12874F534991C1B" modified="2014-02-19" version="1">MAMISSEIFPICSYLPAKSLYRFKAVNKGFYNLLGEGFFLVNHVHNSLKRDDTCFFVQLERPCNEEVRLHLLPSQQQGSGVSSEVLQSLSKSSQILASIKGLILCRSIDKTPSEFYICNPATKSQLPISLPTHDEENLNARAHVMIMLLECYDEFDDYMVVHFETPTDWSSDYACKILKPQEGLWKTMEKGFCAGGRNIKFNMPVHDNGVIHFISDCGSYITKGSPYFEPYIMSYNLKNGTSTMLKLSKTARKSSTDKKCDMSIFNWGKVSMTSSSICLVRLKRSTFKVWILKDYKTNKRNVFEGKIPYNHITVMNGELLIFATEKYIYNCGLTGENYMKIEEICENKCKYYVSLISYMDTLRPCGPGATPLSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P123</accession>
    <name>A0ACC3P123_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002946</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967759">
        <property type="protein sequence ID" value="KAK6645978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="988" mass="109666" checksum="9BD92621C4C3B82D" modified="2026-01-28" version="1">MTPGYEYDINDLHHEAQARWLKPAEVMYILQNHEKFLLTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPEYEHIVLVHYRNTSEGRLSSGAGAQLSPSSSSAFCQSPSPYSNQNPGSTSTLVDSYEPNQSFSSSGTTEVTSDIFILSNKMDHMDGTDAESGTSSELVVTQALRRLEVQLSLNEDSFEDIAPFCNKHEAAHDPNLLHNQTVISNQDQSAAFSGSDDQGLFYDEYKGGQGDGGECYHELIDHGYPDGNEKALWTGVLGSCESSTSVKLPPKNVYLTAGNQENSVSFLGRVLVPVSNQEESHWLNFNSDNSQSSVFSPPQGVGEVKFPAYSSMVETRVTNSDYYGTFFDQSQIVAPLDADSSLTIAHKQKFTIKTLSPEWGYATETTKVIIVGSFLCHPSDSTWACMLGDVEVPVQIIHDGVICCEAPPYLPGKVTLCITSGNRESCSEVREFEYRDKTYSCTQCTQLKTEATRSPEELLLLVRLGQMLLSTSTIKNDNIESGIPLIKQKADDDSWSHIIETLLVGGGTSTSTTDWLLEELLKDKLQQWLSYRSQERDEETDCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLVASGASAGAVTDPTAQDPIGKTAASIAASNGNKGLAGYLSEVAVTSHLSSLVLEESELSKSSAQLQADMTVTSVSKENLAANEDQASLKHTLAAVRNVTQAAARIQSAFRSHSFRKRRAREGINSCGTSVGGIGSIQEISAMSKLAFRSSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGAGLRGFRPEMDINENDDEDEDILKVFRKQKVDVEIEKAVSRVMSMVDSPDARDQYRRMLEKYRQSKAELVAGTSDEVSSTTSVGNALFMEDDLYPFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AED1</accession>
    <name>V7AED1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ApaG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G053400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AED1"/>
    <dbReference type="SMR" id="V7AED1"/>
    <dbReference type="STRING" id="3885.V7AED1"/>
    <dbReference type="Gramene" id="ESW03932">
        <property type="protein sequence ID" value="ESW03932"/>
        <property type="gene ID" value="PHAVU_011G053400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4408">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVHDKDC"/>
    <dbReference type="OrthoDB" id="2305498at2759"/>
    <dbReference type="PhylomeDB" id="V7AED1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1470">
        <property type="entry name" value="ApaG domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ApaG_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036767">
        <property type="entry name" value="ApaG_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018958">
        <property type="entry name" value="Knr4/Smi1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037883">
        <property type="entry name" value="Knr4/Smi1-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47463">
        <property type="entry name" value="F-BOX PROTEIN SKIP16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47463:SF2">
        <property type="entry name" value="F-BOX PROTEIN SKIP16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04379">
        <property type="entry name" value="DUF525"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SMI1_KNR4"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SMI1/KNR4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51087">
        <property type="entry name" value="APAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="ApaG" evidence="3">
        <location>
            <begin position="302"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW03932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="443" mass="50424" checksum="C983A70F74362714" modified="2014-02-19" version="1">MGLESVGDLAINMILKKLEGEDVARVACASKRFRFSASDDTLWTNLCFHELALTQPIDHLGNPFPSFKECYQAWRGAFDMYPWPLVKRVKKCWDRIKTWLTNNFPEAEATLCKGATEADIQTLENLLKVELPLPTRILYRFHNGQEIVKANPETSTFGSSLGLIGGYSFYNHLVNVYLLPIRQIIQETEQIRRHLSFLRRSKFVLVAASSTFRRKLFFLNCSNGQLYVGTNKLHSEKDIIPCVPQDLISLHRELNIEEQQDAMLLWLEEHGRRLEHGFIKLCDKENGRSINLFPEEPPFCSTAVTNGVKVRASALIIPEFIDPQDENEKYLFAYSIRLSLEPQGCLINGMSFNSCQLHWRHWIIRANDDVVSDFNGEAVIGQYPLLHPGAEEFVYQSCTPLPLPSGSIEGSFTFVPGSLAYPKGDPFLATVAQFPLQLPDYIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEK6</accession>
    <name>V7AEK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G032000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEK6"/>
    <dbReference type="SMR" id="V7AEK6"/>
    <dbReference type="STRING" id="3885.V7AEK6"/>
    <dbReference type="Gramene" id="ESW03665">
        <property type="protein sequence ID" value="ESW03665"/>
        <property type="gene ID" value="PHAVU_011G032000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW03666">
        <property type="protein sequence ID" value="ESW03666"/>
        <property type="gene ID" value="PHAVU_011G032000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0320">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IEPVFNC"/>
    <dbReference type="OrthoDB" id="6105938at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033768">
        <property type="term" value="C:SUMO-targeted ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032183">
        <property type="term" value="F:SUMO binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140082">
        <property type="term" value="F:SUMO-ubiquitin ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049627">
        <property type="entry name" value="SLX8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47094">
        <property type="entry name" value="ELFLESS, ISOFORM B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47094:SF1">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13923">
        <property type="entry name" value="zf-C3HC4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="151"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="206" mass="22998" checksum="BD2A8B8664CF7295" modified="2014-02-19" version="1">MSSRTGKGPAVRSYRRRKTTLDLDLNRVPAGDNREQEGPSTQSGLQGIVVEQQPPASQPAMIDVEDIDDDVVECTPRAFAEAKNKSRRNRGSTVVDVELEDQTRRNKRRRELRNQTIINCEKYINLEGSSSSMNDSVKVLSEVRIEPVFNCPICMGPLAEEMSTRCGHIFCKNCIKAAISAQGKCPTCRKKITVKELIRVFLPSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF31</accession>
    <name>V7AF31_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Allene oxide synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G049600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF31"/>
    <dbReference type="SMR" id="V7AF31"/>
    <dbReference type="STRING" id="3885.V7AF31"/>
    <dbReference type="Gramene" id="ESW03880">
        <property type="protein sequence ID" value="ESW03880"/>
        <property type="gene ID" value="PHAVU_011G049600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV50">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYWSNER"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="PhylomeDB" id="V7AF31"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016125">
        <property type="term" value="P:sterol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11071">
        <property type="entry name" value="CYP74"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000024">
        <property type="entry name" value="Allene oxide synthase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002403">
        <property type="entry name" value="Cyt_P450_E_grp-IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286:SF337">
        <property type="entry name" value="9_13 HYDROPEROXIDE LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286">
        <property type="entry name" value="CYTOCHROME P450 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00465">
        <property type="entry name" value="EP450IV"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0349">Heme</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" description="axial binding residue" evidence="6">
        <location>
            <position position="433"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR602403-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="480" mass="53727" checksum="2F22542A887E6120" modified="2014-02-19" version="1">MASSDTNGTKLPLKQIPGSYGIPFFGPMSDRHDYFYHQGRDKFFATRIQKYKSTVIRTNMPPGPFISSNPRVIALLDAVSFPILFDNSKVDKRDVLDGTFMPSTSFFGGYRVCAFQDTTEPSHALIKTFYLNLLASKHASFIPLFRNNLAEHFADLEDKLAGKSSKVSFNTSVGSASFNFLFRLLTGQDPTSTVIGSDGPSLVTTWLAAQLAPLATLGLPWIFNYVEDILIRTLPFPAWTVKSSYKKLYNGFASAGSSVLDEAERLGIKRDEACHNLVFTLGFNAQGGFVNQFPILMKWVGLGGEGLHKQLAEEIRSVVKEENGVSLQALDRMTLTKSVVYEAMRIEPAVPFQYAKARKDLVVESHDAAYEIKKGEMIFGYQPFATKDPKIFEKPEEFVANRFVGPDGEKLLNHVLWSNARETEEPTPDNKQCPAKNLVVLLCRLYLVEFFLRYDTFSFDFKLAVLGPEITIKSLLKASY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFH4</accession>
    <name>V7AFH4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G082100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFH4"/>
    <dbReference type="Gramene" id="ESW04279">
        <property type="protein sequence ID" value="ESW04279"/>
        <property type="gene ID" value="PHAVU_011G082100g"/>
    </dbReference>
    <dbReference type="OMA" id="GNHHYIP"/>
    <dbReference type="OrthoDB" id="1420699at2759"/>
    <dbReference type="PhylomeDB" id="V7AFH4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36040">
        <property type="entry name" value="OS04G0188500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36040:SF5">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753660" evidence="2">
        <location>
            <begin position="21"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="22"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9357" checksum="2DBC157BBB068EC2" modified="2014-02-19" version="1">MKVVVITLLVLMLLASSSVATDRKKFMTKSEKGELSNKSDDNGHHQIPRKEYGKPGSGQRTISEEFNHHYIPRKDYGTPGQGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFX6</accession>
    <name>V7AFX6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G101600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFX6"/>
    <dbReference type="Gramene" id="ESW04517">
        <property type="protein sequence ID" value="ESW04517"/>
        <property type="gene ID" value="PHAVU_011G101600g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="167" mass="19129" checksum="18BFCCD60D1BC3B9" modified="2014-02-19" version="1">MSASSQSGFENRIMFSFLSPSSVFRELFASPPKSVGVKVREVTPAGGKVPKIVFEFSNLPEGESDRRKKLLNSIDKVEEQVLQQLEILKNTASAKEADRANRNKLWMRSLVQRVMDEYSQDVRWTSFASPCHSFSKHPIYGFPDFKKQLSDCKIFVFFINYDSTFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG02</accession>
    <name>V7AG02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Amidophosphoribosyltransferase</fullName>
            <shortName evidence="10">ATase</shortName>
            <ecNumber evidence="3 10">2.4.2.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Glutamine phosphoribosylpyrophosphate amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G103800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O</text>
            <dbReference type="Rhea" id="RHEA:14905"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="EC" id="2.4.2.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="12">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="13">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.14" evidence="3 10"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AG02"/>
    <dbReference type="SMR" id="V7AG02"/>
    <dbReference type="STRING" id="3885.V7AG02"/>
    <dbReference type="Gramene" id="ESW04542">
        <property type="protein sequence ID" value="ESW04542"/>
        <property type="gene ID" value="PHAVU_011G103800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0572">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRHFGVK"/>
    <dbReference type="OrthoDB" id="191723at2759"/>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004044">
        <property type="term" value="F:amidophosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00715">
        <property type="entry name" value="GPATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01931">
        <property type="entry name" value="PurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRTase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005854">
        <property type="entry name" value="PurF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035584">
        <property type="entry name" value="PurF_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01134">
        <property type="entry name" value="purF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11907">
        <property type="entry name" value="AMIDOPHOSPHORIBOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000485">
        <property type="entry name" value="Amd_phspho_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="PRTase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4 10" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="13" id="KW-0408">Iron</keyword>
    <keyword evidence="8 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="14">
        <location>
            <begin position="75"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="11">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="310"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="357"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="419"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="420"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="456"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="507"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="510"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW04542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="558" mass="60191" checksum="7D3D7E2C54D079E0" modified="2014-02-19" version="1">MVAATATSSTLSKPPSLPFNHTHVFPKTPSILPTLPRPAVKRLFLVSSKNPLSDVLSVPTAAATACDDDKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYGTLRSNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLKGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVVVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEILASESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKNLLGTESPNFCYACFSGNYPVEPTELKVKRVGDFVDDGLNGSLESIGGGWVQANPNQIKAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGC4</accession>
    <name>V7AGC4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G085800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGC4"/>
    <dbReference type="SMR" id="V7AGC4"/>
    <dbReference type="STRING" id="3885.V7AGC4"/>
    <dbReference type="Gramene" id="ESW04325">
        <property type="protein sequence ID" value="ESW04325"/>
        <property type="gene ID" value="PHAVU_011G085800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVH2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSPVMEH"/>
    <dbReference type="OrthoDB" id="784654at2759"/>
    <dbReference type="PhylomeDB" id="V7AGC4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012862">
        <property type="entry name" value="DUF1635"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33431">
        <property type="entry name" value="ENABLED-LIKE PROTEIN (DUF1635)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33431:SF3">
        <property type="entry name" value="ENABLED-LIKE PROTEIN (DUF1635)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07795">
        <property type="entry name" value="DUF1635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="87"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="29168" checksum="79D247F2EE644C23" modified="2014-02-19" version="1">MDNQRSPLLSWAYYCHGKSMEELKQSLMCTTLELEQTRASVQEELRKRDDQLLTLKELLNKVIRERDEAQEKWQRLLLEKMVFQQQKQQHQTAPASGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVMEHLGQPPHVGRAQPQLPESMIELISPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPALESFEIPPVTIPSPQPQAQAQAQAQFLHQESFTSNCGRVSRKRVFCEGSDSPTQTKFQRIVLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AH08</accession>
    <name>V7AH08_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G135200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AH08"/>
    <dbReference type="Gramene" id="ESW04902">
        <property type="protein sequence ID" value="ESW04902"/>
        <property type="gene ID" value="PHAVU_011G135200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1841441at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34061">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34061:SF2">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9295" checksum="C63868BA79D3758A" modified="2014-02-19" version="1">MAATTNFFSLQSTNSTENGGENKGRGCGKPDGVAMWFIDGVTTAFFASLEYCCIRIATQEDVDEANEDMPLILNDGNLRRHHHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHC9</accession>
    <name>V7AHC9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Growth-regulating factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G017700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription activator.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the GRF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHC9"/>
    <dbReference type="STRING" id="3885.V7AHC9"/>
    <dbReference type="Gramene" id="ESW03481">
        <property type="protein sequence ID" value="ESW03481"/>
        <property type="gene ID" value="PHAVU_011G017700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSFK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PMTARWP"/>
    <dbReference type="OrthoDB" id="1927209at2759"/>
    <dbReference type="PhylomeDB" id="V7AHC9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014978">
        <property type="entry name" value="Gln-Leu-Gln_QLQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031137">
        <property type="entry name" value="GRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014977">
        <property type="entry name" value="WRC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31602">
        <property type="entry name" value="GROWTH-REGULATING FACTOR 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31602:SF8">
        <property type="entry name" value="GROWTH-REGULATING FACTOR 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08880">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08879">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00951">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51666">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51667">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="3 4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="QLQ" evidence="7">
        <location>
            <begin position="21"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="WRC" evidence="8">
        <location>
            <begin position="75"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="105"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="301"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Bipartite nuclear localization signal" evidence="4">
        <location>
            <begin position="80"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Bipartite nuclear localization signal" evidence="4">
        <location>
            <begin position="108"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="105"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="119"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="138"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="301"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="36342" checksum="6607F2EE67AA1B74" modified="2014-02-19" version="1">MNNSGGGTLMGLSNGYYGRSPFTVSQWEELEHQALIFKYMLAGLPVPHNLVLPIQKSFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGRNRSRKPVESQTVTQSSSTVTSLDGGSGRSRTLNFQNLPANGFGNLQGTDSGTHHTNYHVDSIPYAILSKECRYLQGLKSEGGDHIFFSEASGSNKVLQMESHLEQTWPLMSTRVVSFTTSKSTLLHSDFPQHSFLSGEYASEEHLKEEDHQSLRPFFNEWPKSRDSWSALEDERSNQTAFSTTQLSISIPMSSDISATSSQSPHGENEIQFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHG0</accession>
    <name>V7AHG0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G114800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHG0"/>
    <dbReference type="Gramene" id="ESW04665">
        <property type="protein sequence ID" value="ESW04665"/>
        <property type="gene ID" value="PHAVU_011G114800g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="8346" checksum="4D5090666B595B10" modified="2014-02-19" version="1">MSLWRRNSINVEHDLCRCYLFLSSSCKARQQESGWNYVERCLADKLFFLANLVNWHMKNQVVYLLMWVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ78</accession>
    <name>V7AJ78_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Cyclic nucleotide-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_011G137200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ78"/>
    <dbReference type="Gramene" id="ESW04928">
        <property type="protein sequence ID" value="ESW04928"/>
        <property type="gene ID" value="PHAVU_011G137200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0498">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHAWNIV"/>
    <dbReference type="OrthoDB" id="421226at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005216">
        <property type="term" value="F:monoatomic ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.630:FF:000003">
        <property type="entry name" value="Cyclic nucleotide-gated ion channel 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000063">
        <property type="entry name" value="cyclic nucleotide-gated ion channel 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.630">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45651">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45651:SF14">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-GATED ION CHANNEL 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81324">
        <property type="entry name" value="Voltage-gated potassium channels"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0407">Ion channel</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8" id="KW-1071">Ligand-gated ion channel</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="267"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="327"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="472"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="12">
        <location>
            <begin position="576"/>
            <end position="686"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="117"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="122"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW04928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="773" mass="88904" checksum="6935CB6CB0622B7D" modified="2014-02-19" version="1">MYSKYIIIISTLSSYNVWVSLEQLTKHGYHTIEQPSSLHTSLFLCVCVPLTTFLIQKSQSYLLTISFPHTIHPQSNHPNKKEIHFFLLIFLSTTMATTITEQESSSRASHVLHYTPTPITTSDEEEEEEEEHLEGNENEPTGAGWRSTAECGGDGRRTLGKVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMTDALHLWNMVLRMKMAKRTFGLGAAAGLRDTRPRTVALGYLKSRTGFIFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCGKTSGCGMNILSCQSPIYYGSNKSLLVRDRARLAWAENREVRQTCLNGPDNYNYGAYRWTVQLVKNNNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGFRQRVRNYERHRWAAMRGVDEYEMTRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJF5</accession>
    <name>V7AJF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Brix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G0768001g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the BRX1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJF5"/>
    <dbReference type="STRING" id="3885.V7AJF5"/>
    <dbReference type="Gramene" id="ESW04221">
        <property type="protein sequence ID" value="ESW04221"/>
        <property type="gene ID" value="PHAVU_011G0768001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2971">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INFRYWH"/>
    <dbReference type="OrthoDB" id="1638493at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007109">
        <property type="entry name" value="Brix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026532">
        <property type="entry name" value="BRX1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13634">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13634:SF0">
        <property type="entry name" value="RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52954">
        <property type="entry name" value="Class II aaRS ABD-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50833">
        <property type="entry name" value="BRIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Brix" evidence="7">
        <location>
            <begin position="58"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="17"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW04221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="17210" checksum="F51CBEDEE603F242" modified="2014-02-19" version="1" fragment="single">MGKKRKHSESSELVAQPKKEDAAPERPTRTLLGWKDKSLVNDEVDDSNVGSPIFRNKEKVLVTCSRRISYRYRHLMLNLVSLLPHCKKDNKVESKETKGATLNELVELKSCSSCLFFEVEGFVSWLQMLMLFNYDMVVMSLCLVNLLYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKM9</accession>
    <name>V7AKM9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G113700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKM9"/>
    <dbReference type="Gramene" id="ESW04651">
        <property type="protein sequence ID" value="ESW04651"/>
        <property type="gene ID" value="PHAVU_011G113700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SA9W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTFVEPQ"/>
    <dbReference type="OrthoDB" id="1931227at2759"/>
    <dbReference type="PhylomeDB" id="V7AKM9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="96"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="115" mass="13224" checksum="79A45F762EF1C98F" modified="2014-02-19" version="1">MSTLVRNTTLTFSRKYRYELLGLQGKDKMLKSISYRRRRAKQRQIFLTTYKLSSLDSNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCGSRSAISDGSSPVPNRKNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKY5</accession>
    <name>V7AKY5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G004400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKY5"/>
    <dbReference type="Gramene" id="ESW05925">
        <property type="protein sequence ID" value="ESW05925"/>
        <property type="gene ID" value="PHAVU_010G004400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1237">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLMETRR"/>
    <dbReference type="OrthoDB" id="1181826at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000109">
        <property type="entry name" value="POT_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11654">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00854">
        <property type="entry name" value="PTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="338"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="370"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="455"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="485"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="525" mass="59144" checksum="944812628C27D39A" modified="2014-02-19" version="1">MLQHCGILGVLYYDGLLRRFEGGGGYLPISAILTNLQDGLSSLLFIFASLISEAYTGPVTMITICAATSIEGLILIWISAYSESSGALYAAILLLTIGKSGQTLLDSFLQNKVEEILEAREKIEIKDGSTEKQNELDLIRIILTNTWLLVPLVVGYVVILFTDFFNQDYDIIFRNSAVLMGGCYLLFLFGSTKYRHEQVSDESYFGKIFRICKAAYGRRRSDYPASENGYYWKGNVRTNLCYVYGKGVRLKPRVPRLFRWLDKAAILVPEVSPDTQERDGKVCSVKEVREVKSLVPMNYLCFSFFAYSLLVATGNTFFVAQASSMTTTNGYDISKLFLIKVAAGKVSRFICFLIMAGLRSKRTTYSTSKTFVVTTSIIRIGFGMVSAVICCFVAWKMEFYRLYSLEVKIEALYPQFILLGMTEALVEGGLTKLFHAHVAKSMWSFADSYIELVNGIGKLLLIPFVLALRGSWLKESIYTTDLNRFYLMLGILNAALLLVYGYYSFRYTYKETCPEDAAQPDLEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALM0</accession>
    <name>V7ALM0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G1473000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALM0"/>
    <dbReference type="Gramene" id="ESW05046">
        <property type="protein sequence ID" value="ESW05046"/>
        <property type="gene ID" value="PHAVU_011G1473000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1470350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="44" mass="4902" checksum="416A7AAE4AE2ECF6" modified="2014-02-19" version="1" fragment="single">MLNVRLEKALKEGVKVVHELVMKIVKAKKDEITSNGRKGGIDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN41</accession>
    <name>V7AN41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G192600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN41"/>
    <dbReference type="SMR" id="V7AN41"/>
    <dbReference type="Gramene" id="ESW05591">
        <property type="protein sequence ID" value="ESW05591"/>
        <property type="gene ID" value="PHAVU_011G192600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TELEMCK"/>
    <dbReference type="OrthoDB" id="1733640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="15"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="170"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="428"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="540"/>
            <end position="856"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1148" mass="131336" checksum="79EEB212B4A67090" modified="2014-02-19" version="1">MPVLETLGGALFCAVLQMLFDKLDSHQVLDYFRGRKLDERLLKKLKRKLMDINAVVDDAEQKQFSNSLVKEWLDEVRDALYDAEDLLDEIDYECSKNQSVAEFQCSASKVSSFESKMIEVLDDLESLSNQKVVQDFKISSGVGYGLGNKVSKKNNESSSLVAEEVIYGRDEEKEMILNWLTSESNNHNQLSILSIVGMGGMGKTTLAQHVYNDPKMKEAKFDLKAWVCVSDEFHVLTVSKAIIGAFTKSKDDSEDLEMAHGKLKEKLTGVKFFLVLDDVWNEDRNQWKTLRTPLKYGAKGSKILVTTRSNKVASTLESNNIHRLKQLQEDHSWQVFVNHALQDDNSKLNFELKEIGMNIVEKCQGLPLALETVGSLLQSKSSVSEWEGVLESNIWDLPIEDSNILPALLLSYYHLPSHLKRCFAYCALFPKNHEFDKESLILLWMAENYLHCSQPSEQYFNDLLSRSFFQQSIRYNKTYFVMHDLVNDLAKYVSSEICFRLGVDKAEGERVPKTTRHFSIVRNLAKCDEYRSLCDAKGLRTFINFVNYGMSIYELISNFKFLRVLSLPSCHNVEELLDTICDLIHLRSLDLSSTNIERLPDSLCSLYNLQVLKLNHCTSLKELPSTLHELTKLRRLELGGTTLTKVPMLLGKLKNLQVWMGEFKVGKSGSEFSIQQLGQLDLHGYLSLSNLENIVNPCDTLAADLKNKTHLVGLRLEWDLKLNNEDPIKEREVIENLKPSRHLKQLSIRYFCGTQFPGWLSDKFLLNMVSLNLYNCKHCQWLPSLGLLTFLKQLEIEGLDKIVRIDADFYGNSSSAFASLEMLTFHDMKEWEEWQCMKGAFPRLQCLIVSKCPKLKGHLPEHLPYLKNLIVGHMNIPINHCYYFLVQLNISQCCDSLTNFPLDLFPKLRELDLGNCRNLQIISQGHPHHHLKSLEIKKCSEFESFPNEGLLTSELETFHIKELEKLKSMPKCMSSLLPSLSYLHIKDCPGVELSEGCLPSNLKKMFLLNCSKFVASLKKGVWGTNPSLESLYIEEGDVECFPSKGLFPLSLTELSIKDCPNLKKLDFRGLSHLSSLKKLVIHNCPILQCLSEENLPESISELMIRDCPLLKQRCKKQEGEDWEKIAYIKTVWIDDEQVNIKDKAQVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANN5</accession>
    <name>V7ANN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G108100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endomembrane system</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANN5"/>
    <dbReference type="SMR" id="V7ANN5"/>
    <dbReference type="STRING" id="3885.V7ANN5"/>
    <dbReference type="Gramene" id="ESW07179">
        <property type="protein sequence ID" value="ESW07179"/>
        <property type="gene ID" value="PHAVU_010G108100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT6M">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LDECENQ"/>
    <dbReference type="OrthoDB" id="45365at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010114">
        <property type="term" value="P:response to red light"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18186">
        <property type="entry name" value="BTB_POZ_ZBTB_KLHL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.420:FF:000008">
        <property type="entry name" value="BTB/POZ domain-containing protein POB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.710.10:FF:000099">
        <property type="entry name" value="BTB/POZ domain-containing protein POB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011705">
        <property type="entry name" value="BACK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045890">
        <property type="entry name" value="POB1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46336:SF3">
        <property type="entry name" value="BTB_POZ DOMAIN-CONTAINING PROTEIN POB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46336">
        <property type="entry name" value="OS02G0260700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07707">
        <property type="entry name" value="BACK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21536">
        <property type="entry name" value="BTB_KLHL33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00875">
        <property type="entry name" value="BACK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00225">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
        <property type="entry name" value="TRAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="BTB" evidence="5">
        <location>
            <begin position="138"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="551" mass="62110" checksum="1F1EAFED41B570FB" modified="2014-02-19" version="1">MKDSNSDLFDPVVAMESEWSRGGSTSDADFAFAFNDSNFSDRVLRIEIMPDPVDARPDTDGCTTIADWARHRKRRREDVKKDNGVDIASVPDEQILNGNQPDLDECENQDEDAVAMVEEPNSGDEATNSIDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLNTTTTAPALLDVLMAADKFEVASCMRCCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVLALPLAGIEAILSSDDLQVASEDAVYDFVLKWSRLQYPKLEERREVLGSRLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNHRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP65</accession>
    <name>V7AP65_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAD(P)-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G011300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP65"/>
    <dbReference type="SMR" id="V7AP65"/>
    <dbReference type="STRING" id="3885.V7AP65"/>
    <dbReference type="Gramene" id="ESW06001">
        <property type="protein sequence ID" value="ESW06001"/>
        <property type="gene ID" value="PHAVU_010G011300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1203">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GANCDYS"/>
    <dbReference type="OrthoDB" id="419598at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05243">
        <property type="entry name" value="SDR_a5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000253">
        <property type="entry name" value="Uncharacterized protein At5g02240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044163">
        <property type="entry name" value="SARED1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14194">
        <property type="entry name" value="NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14194:SF86">
        <property type="entry name" value="OS05G0110300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-binding" evidence="2">
        <location>
            <begin position="13"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="255" mass="27596" checksum="0716DEA95858E23E" modified="2014-02-19" version="1">MADSSPRTVLVTGSGGRTGQIVYKKLKEKPNQYVARGLVRTEESKQKIGGADDVFVGDIRDAGSITPAFEGIDSLIILTSAVPQMKPGFDPTKGERPEFYFSEGAYPEQVDWIGQKNQIDAAKAAGVKHVVLVGSMGGTNTNHPLNSLGKGNILIWKRKAEQYLADSGVPYTIIRPGGLLDKEGGIRELIVGKDDELLQTENKAIPRADVAEVCIQALNFEEVQFKAFDLASKPEGVGTPTKDFKALFSNITARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7APC7</accession>
    <name>V7APC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glycine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G049600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Gly) + glycine + ATP = glycyl-tRNA(Gly) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="2"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APC7"/>
    <dbReference type="STRING" id="3885.V7APC7"/>
    <dbReference type="Gramene" id="ESW06458">
        <property type="protein sequence ID" value="ESW06458"/>
        <property type="gene ID" value="PHAVU_010G049600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS5T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1545at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00733">
        <property type="entry name" value="GlyRS_alpha_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.930.10:FF:000006">
        <property type="entry name" value="Glycine--tRNA ligase alpha subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.180:FF:000002">
        <property type="entry name" value="Glycine--tRNA ligase, chloroplastic/mitochondrial 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="entry name" value="Bira Bifunctional Protein, Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.180">
        <property type="entry name" value="Class II aaRS and biotin synthetases, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00254">
        <property type="entry name" value="Gly_tRNA_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015944">
        <property type="entry name" value="Gly-tRNA-synth_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002310">
        <property type="entry name" value="Gly-tRNA_ligase_asu"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00388">
        <property type="entry name" value="glyQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006827">
        <property type="entry name" value="PRK09348.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30075:SF2">
        <property type="entry name" value="GLYCINE--TRNA LIGASE, CHLOROPLASTIC_MITOCHONDRIAL 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30075">
        <property type="entry name" value="GLYCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02091">
        <property type="entry name" value="tRNA-synt_2e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02092">
        <property type="entry name" value="tRNA_synt_2f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01044">
        <property type="entry name" value="TRNASYNTHGA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="Class II aaRS and biotin synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="38"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="51"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW06458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="564" mass="63568" checksum="A3B3716B38E67A89" modified="2014-02-19" version="1">MGILALPLVISLLKPHATTRLRLSHSLLLRRPFATTVSATTTPHSPPPSSSPSLSRHSSASALSDNRSVNSSSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSVRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVAAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARSLLSSGFAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTREMLGFPLGFISEPDHFVLPKGVLEAACVKVHDHSRAFVLEIGTEEMPPQDVVDASNQLKDLVLQLLERQRLNHGEVQAFGTPRRLVVAVQNLYTKQAEKEVEVRGPPVSKAFDHEGNPTKAIEGFCRRYSVPLDLVYRKVDGKTEYVYAHVKESSRYALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDVVVPFTFAGVIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ02</accession>
    <name>V7AQ02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 20">Peroxidase</fullName>
            <ecNumber evidence="5 20">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_010G066900g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="17 20">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17 20">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="17 20">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 20">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="20">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="5 20"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ02"/>
    <dbReference type="SMR" id="V7AQ02"/>
    <dbReference type="STRING" id="3885.V7AQ02"/>
    <dbReference type="Gramene" id="ESW06673">
        <property type="protein sequence ID" value="ESW06673"/>
        <property type="gene ID" value="PHAVU_010G066900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RTHW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WVDFGNS"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000009">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF126">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 17 20" id="KW-0106">Calcium</keyword>
    <keyword evidence="13 19" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 20" id="KW-0349">Heme</keyword>
    <keyword evidence="20" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="12 17 20" id="KW-0408">Iron</keyword>
    <keyword evidence="8 17 20" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 20" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="20" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 20" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148927" description="Peroxidase" evidence="20">
        <location>
            <begin position="26"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="21">
        <location>
            <begin position="26"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="17">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="18">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="36"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="69"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="123"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="19">
        <location>
            <begin position="202"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW06673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="319" mass="35067" checksum="00A656A8C7830AEA" modified="2014-02-19" version="1">MALRGYFFVLLHVFVFSALATSAFSELSSHYYDYSCPKALSTIKTVVETAVQKERRMGASLTRLHFHDCFVNGCDGSILLDSTSSIDSEKNSNANFESARGFEVVDEIKQAVDEACGKPVVSCADILAVAARDSVVALGGPTWKVKLGRRDSTTASRAAADANIPAPFFSLSELITNFRNHGLDEKDLVVLAGGHTLGYARCATFRDRIYEDSNIDSDFAKDLKYICPTTGGDSNLSPLDPTAAQFDKNYYSNLVQKKGLLHSDQELFNGGSTDELVKEYSYDTEDFYEDFANSMIKMGNIQPLTGNQGEIRVNCRKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="65" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQX5</accession>
    <name>V7AQX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G007600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>D-glucose(out) + H(+)(in) = D-glucose(in) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:73203"/>
            <dbReference type="ChEBI" id="CHEBI:4167"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="10">
            <dbReference type="Rhea" id="RHEA:73204"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>sucrose(out) + H(+)(in) = sucrose(in) + H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:73211"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17992"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="11">
            <dbReference type="Rhea" id="RHEA:73212"/>
        </physiologicalReaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Vacuole membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQX5"/>
    <dbReference type="STRING" id="3885.V7AQX5"/>
    <dbReference type="Gramene" id="ESW07969">
        <property type="protein sequence ID" value="ESW07969"/>
        <property type="gene ID" value="PHAVU_009G007600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVKDDHW"/>
    <dbReference type="OrthoDB" id="6339427at2759"/>
    <dbReference type="PhylomeDB" id="V7AQX5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009705">
        <property type="term" value="C:plant-type vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000103">
        <property type="entry name" value="monosaccharide-sensing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000108">
        <property type="entry name" value="Monosaccharide-sensing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050814">
        <property type="entry name" value="Myo-inositol_Transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020">
        <property type="entry name" value="PROTON MYO-INOSITOL COTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020:SF35">
        <property type="entry name" value="SUGAR TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="7 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <keyword evidence="5" id="KW-0926">Vacuole</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="71"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="102"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="139"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="560"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="591"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="617"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="657"/>
            <end position="677"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="683"/>
            <end position="706"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="14">
        <location>
            <begin position="7"/>
            <end position="712"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="327"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="333"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00050663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00051074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW07969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="736" mass="79035" checksum="65DE24504D91629F" modified="2014-02-19" version="1">MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATLITTCSGPVSDWLGRRPMLIISSLLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLIPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTPSPSWRLMLGVLSIPSLLYFALTVFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLEIGGDTSIEEYIIGPAEEVADGRELATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPMVTLFGSIHEKLPEAGTGSMRSTLFPTFGSMFSTAEPHGKNEQWDEESLQREGEDYMSDAAGGDSDDNLQSPLISRQTTSLEKDMPPPPSHGSILSSMRRHSSLMQGSAEQVGSTGIGGGWQLAWKWTDKGEEGKRQGEFKRIYLHEEGVSASRRGSVVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEILLSDIGIGSESASFLISALTTLLMLPCIALAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVVHAAISTTCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAATAKNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQZ1</accession>
    <name>V7AQZ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">gibberellin 3beta-dioxygenase</fullName>
            <ecNumber evidence="9">1.14.11.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G152200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Hormone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Plant hormone biosynthesis; gibberellin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the iron/ascorbate-dependent oxidoreductase family. GA3OX subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.15" evidence="9"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQZ1"/>
    <dbReference type="SMR" id="V7AQZ1"/>
    <dbReference type="STRING" id="3885.V7AQZ1"/>
    <dbReference type="Gramene" id="ESW07710">
        <property type="protein sequence ID" value="ESW07710"/>
        <property type="gene ID" value="PHAVU_010G152200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHACKKW"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016707">
        <property type="term" value="F:gibberellin 3-beta-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009686">
        <property type="term" value="P:gibberellin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000013">
        <property type="entry name" value="Gibberellin 3-beta-dioxygenase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00682">
        <property type="entry name" value="IPNSYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6 10" id="KW-0408">Iron</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="11">
        <location>
            <begin position="206"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00061560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="41599" checksum="E4493ECD42F638AF" modified="2014-02-19" version="1">MPSLSEAFQDHPVYLHHHKHPDFNSLQQQFPESYAWTQPDSDHHHHYSDNTTTNTVPVIDFKDPNASNLIGHACKTWGVFQLVNHGIPIKLFTDIQTACLALFSLPLHQKLKAARSPDGVAGYGRARISSFFPKLMWSECFTILDSPLHLFLQLWPQEYAKYCEIVKEYEAAMKKLAAKLMCLVLASLGISKEDIKWAGPRGEFNGACAALHLNSYPSCPDPDRAMGLAAHTDSTLLTILHQNNVSGLQVLKDGEGWVALPPLAGGLVINIGDLLHILSNGLYPSVLHRVRVNRSRQRFSVAYLYGPPTNVEISPNEKLVGPGRPSLFQSVTWNEYLGKKAKHFNKALSAVRVSSSINGLFDVNEDQNNDFQVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARJ2</accession>
    <name>V7ARJ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Queuine tRNA-ribosyltransferase catalytic subunit 1</fullName>
            <ecNumber evidence="6">2.4.2.64</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Guanine insertion enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA-guanine transglycosylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G033100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming queuine, allowing a nucleophilic attack on the C1' of the ribose to form the product.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>guanosine(34) in tRNA + queuine = queuosine(34) in tRNA + guanine</text>
            <dbReference type="Rhea" id="RHEA:16633"/>
            <dbReference type="Rhea" id="RHEA-COMP:10341"/>
            <dbReference type="Rhea" id="RHEA-COMP:18571"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:17433"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:194431"/>
            <dbReference type="EC" id="2.4.2.64"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterodimer of a catalytic subunit and an accessory subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the queuine tRNA-ribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.64" evidence="6"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARJ2"/>
    <dbReference type="SMR" id="V7ARJ2"/>
    <dbReference type="STRING" id="3885.V7ARJ2"/>
    <dbReference type="Gramene" id="ESW08272">
        <property type="protein sequence ID" value="ESW08272"/>
        <property type="gene ID" value="PHAVU_009G033100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3908">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10249838at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008479">
        <property type="term" value="F:tRNA-guanosine(34) queuine transglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.105">
        <property type="entry name" value="Queuine tRNA-ribosyltransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00168">
        <property type="entry name" value="Q_tRNA_Tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004803">
        <property type="entry name" value="TGT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036511">
        <property type="entry name" value="TGT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002616">
        <property type="entry name" value="tRNA_ribo_trans-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00430">
        <property type="entry name" value="Q_tRNA_tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00449">
        <property type="entry name" value="tgt_general"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43530">
        <property type="entry name" value="QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43530:SF1">
        <property type="entry name" value="QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01702">
        <property type="entry name" value="TGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51713">
        <property type="entry name" value="tRNA-guanine transglycosylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="5 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA-guanine(15) transglycosylase-like" evidence="7">
        <location>
            <begin position="62"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding" evidence="6">
        <location>
            <begin position="295"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding; important for wobble base 34 recognition" evidence="6">
        <location>
            <begin position="319"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="140"/>
            <end position="144"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="352"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="354"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="357"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="382"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="461" mass="51149" checksum="BEEA3818736F5DDA" modified="2014-02-19" version="1">MFGGMSLEAPITWCLCFKPKLKTNTTNMQPPLKSRSRSRQGYTTTVTNAMALAFEVLGRFNRARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHKFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIEIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICAKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEHKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMADDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCEEYDSKSMPEEVSLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARM0</accession>
    <name>V7ARM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cytochrome b561 and DOMON domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G114200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARM0"/>
    <dbReference type="SMR" id="V7ARM0"/>
    <dbReference type="STRING" id="3885.V7ARM0"/>
    <dbReference type="Gramene" id="ESW07253">
        <property type="protein sequence ID" value="ESW07253"/>
        <property type="gene ID" value="PHAVU_010G114200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4293">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="19261at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd08760">
        <property type="entry name" value="Cyt_b561_FRRS1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09631">
        <property type="entry name" value="DOMON_DOH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006593">
        <property type="entry name" value="Cyt_b561/ferric_Rdtase_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045266">
        <property type="entry name" value="DOH_DOMON"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005018">
        <property type="entry name" value="DOMON_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23130">
        <property type="entry name" value="CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23130:SF115">
        <property type="entry name" value="OS01G0680900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03351">
        <property type="entry name" value="DOMON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00665">
        <property type="entry name" value="B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00664">
        <property type="entry name" value="DoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50939">
        <property type="entry name" value="CYTOCHROME_B561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50836">
        <property type="entry name" value="DOMON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753535" description="Cytochrome b561 and DOMON domain-containing protein" evidence="9">
        <location>
            <begin position="33"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="254"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="331"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="356"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="DOMON" evidence="10">
        <location>
            <begin position="72"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome b561" evidence="11">
        <location>
            <begin position="187"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="405" mass="44895" checksum="1CFE40075B8BBD33" modified="2014-02-19" version="1">MANSRSWTLIWPSFVRLCVLNLVVNFKITALADDSGNGGVATEDTCKNTNYQTFLPPPYQNISHLICTPVWHTFELRYIQNGDTTTVILSAPYTIGWVGIGFSRDGMMVGSSAMVGWISKHGHAKINQFYLRGKRTSEVIIDKGELPLNNVPAAVATNGAEIHLAFQLQTTTPFQKQPILLAFGSKYPQNHHLSTHEDKTAIVFDFSAGSTSPVSQELTQMRTNHGILGIIGWGLILPLGAIIARYFRHKDPVWLYLHAVFQFVGFTFGLSTVILGLQLYSKMHAHIQVHRGIGIFVLVLSILQIFALILRPNKDSKIRKIWNWYHGWFGRITLIFATINIVLGIQAAGAGSDWKIGYGFLFGIMVAAATVLEVLAYLKRLEMRSLPPNFHTDPVGGATFPTGGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASS0</accession>
    <name>V7ASS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CHCH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G146800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASS0"/>
    <dbReference type="SMR" id="V7ASS0"/>
    <dbReference type="STRING" id="3885.V7ASS0"/>
    <dbReference type="Gramene" id="ESW07643">
        <property type="protein sequence ID" value="ESW07643"/>
        <property type="gene ID" value="PHAVU_010G146800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3477">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GTNDEAC"/>
    <dbReference type="OrthoDB" id="268594at2759"/>
    <dbReference type="PhylomeDB" id="V7ASS0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47565">
        <property type="entry name" value="CYTOCHROME C OXIDASE 19-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47565:SF2">
        <property type="entry name" value="CYTOCHROME C OXIDASE 19-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51808">
        <property type="entry name" value="CHCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW07643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="101" mass="11296" checksum="8A78A617A0FB81F1" modified="2014-02-19" version="1">MSAAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKAEYLNCLKTAGHQSEKCRQFSKKYLQCRMERNLMAKQDLAELGFKESNVETPGGKITDRVDNQDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASU2</accession>
    <name>V7ASU2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G061700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASU2"/>
    <dbReference type="SMR" id="V7ASU2"/>
    <dbReference type="Gramene" id="ESW08639">
        <property type="protein sequence ID" value="ESW08639"/>
        <property type="gene ID" value="PHAVU_009G061700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R498">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TCKEITQ"/>
    <dbReference type="OrthoDB" id="551907at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010158">
        <property type="term" value="P:abaxial cell fate specification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044847">
        <property type="entry name" value="KAN_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31496">
        <property type="entry name" value="TRANSCRIPTION FACTOR KAN2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31496:SF25">
        <property type="entry name" value="TRANSCRIPTION FACTOR KAN3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="3" id="KW-0221">Differentiation</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="142"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="35832" checksum="FEC534FA428CD525" modified="2014-02-19" version="1">MCTSPHAVMPTFAPMPEPDLSLNISPPFTSDPDAKQVETTCTGLTLTTKTLYTDLCSTSDSGSSGSDLSNENGFSNTLYNLGHREPTLSLGFGRENLNPYRIQGAVLRNFNHHNNQPQTNTFDFKRNARGIPGVKRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQTGIGLSQKPGIVDLHGALACERPNLPQPLLKFHRAPWQSSMETNSINYTQNPIINSMYSHLKGNQTMVGGQHYGGLSNCMEEKLESCSLSRSDMTLDLEFTLGRPTTCKEITQKQEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AV25</accession>
    <name>V7AV25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Albumin-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G133400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AV25"/>
    <dbReference type="SMR" id="V7AV25"/>
    <dbReference type="Gramene" id="ESW09507">
        <property type="protein sequence ID" value="ESW09507"/>
        <property type="gene ID" value="PHAVU_009G133400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIESEAY"/>
    <dbReference type="OrthoDB" id="756060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.110.10.10">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036375">
        <property type="entry name" value="Hemopexin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018487">
        <property type="entry name" value="Hemopexin-like_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00045">
        <property type="entry name" value="Hemopexin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00120">
        <property type="entry name" value="HX"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50923">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51642">
        <property type="entry name" value="HEMOPEXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="Hemopexin" evidence="1">
        <location>
            <begin position="115"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="226" mass="25454" checksum="852EB667E97E1D7E" modified="2014-02-19" version="1">MAYINAAFRSSREYEVYFFVKNKYVRVQYTPGKTDDKILTNLHLISSGFPSLAATFFAEPGMDCSFDTEASKAYVFSTKYCAYIDYAPATTNDKILSGPSTIAEMFPGLKNTVFENGIDSAFRSNKGKEVYLFKGNQYTRIAYDSKQLVGNIRNIVDGFPVLKDTIFENGIDACFASHIESEAYLFKGENYVRIKFDSDGYDDILLGDVTPILDGWRCLRGIFPVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVP1</accession>
    <name>V7AVP1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G150100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVP1"/>
    <dbReference type="SMR" id="V7AVP1"/>
    <dbReference type="STRING" id="3885.V7AVP1"/>
    <dbReference type="Gramene" id="ESW09712">
        <property type="protein sequence ID" value="ESW09712"/>
        <property type="gene ID" value="PHAVU_009G150100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS6I">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEMMTSC"/>
    <dbReference type="OrthoDB" id="645697at2759"/>
    <dbReference type="PhylomeDB" id="V7AVP1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000002">
        <property type="entry name" value="Nac domain-containing protein 86"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF232">
        <property type="entry name" value="TRANSCRIPTION FACTOR NAM FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="6">
        <location>
            <begin position="6"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="481" mass="52469" checksum="C6DE62271EAFDAA9" modified="2014-02-19" version="1">MARRNSTPGFRFRPTDVELIEFFLKRKVRGKVIPSGVIAELDLYKYAPWDLPDKSALQSGDLEWYFFCPKGKKYSTGGRFNRSTEVGYWKTTGKDRAVEHKNRVVGMVKTLVFHTGKAPKGDRTDWVMHEFRVDDKEMVDEGSSQDSYVICRIFRKEGPGPRNGAQYGKPYDEKEWDTDEEIDSVQSERVASMSTPVPIQPSESHISIANDINPSTSGCAGLTSVSCASKLMPSCSAYCVPSNNQIDSVSCVSELMPSCSALPFSPNCAFDSVSGLSKVTPSCSTVPLTPNYDVDSVSCVSKLMPSCSAFSSAPNSEVDSVSVSKMPSCLPLASAPNNLVDTLSSVSELMPSCTAPSPNHQDDENILSLLDYFKEDDDTMAVNENNGIKKVDPDQANNAECAPCLDPNVIFENLGDLDSLVGLGEGSFSSGQKNGLSTSDMFYTGGDYMLGSWEPQDFLELTDLAGPQPWQNKHGSSGEYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXZ3</accession>
    <name>V7AXZ3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G100500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXZ3"/>
    <dbReference type="STRING" id="3885.V7AXZ3"/>
    <dbReference type="Gramene" id="ESW09106">
        <property type="protein sequence ID" value="ESW09106"/>
        <property type="gene ID" value="PHAVU_009G100500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT18">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKVPSFN"/>
    <dbReference type="OrthoDB" id="1921166at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012866">
        <property type="entry name" value="DUF1644"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31197">
        <property type="entry name" value="OS01G0612600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31197:SF4">
        <property type="entry name" value="OS02G0150900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07800">
        <property type="entry name" value="DUF1644"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="240" mass="27398" checksum="148369003E4BB0A8" modified="2014-02-19" version="1">MVVRMEDILLDTNWEDVICPICLEAPHNSVLIQCSSYDKGCRPFVCDTSQLHSNCLDRFKSTKMSDANSMANSESVVSDCQYKLSCPLCRGDVSGWIIVDKARVHLDEKKRSCDEQQCAFIGSYSELQKHAQLEHPHACPSKIDPARQLDWENFQQSSEIVDVLSTIHSEIPRGVVLGDYVIEYGNDDSADEFEDFPGDEEYGEFRLDQIDDDFSTIDPLRGGSRVRRLRRRRHSRSNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYG1</accession>
    <name>V7AYG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein MIZU-KUSSEI 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G201400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYG1"/>
    <dbReference type="STRING" id="3885.V7AYG1"/>
    <dbReference type="Gramene" id="ESW10345">
        <property type="protein sequence ID" value="ESW10345"/>
        <property type="gene ID" value="PHAVU_009G201400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTCE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVARREC"/>
    <dbReference type="OrthoDB" id="1859415at2759"/>
    <dbReference type="PhylomeDB" id="V7AYG1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010274">
        <property type="term" value="P:hydrotropism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006460">
        <property type="entry name" value="MIZ1-like_pln"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01570">
        <property type="entry name" value="A_thal_3588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31696">
        <property type="entry name" value="PROTEIN MIZU-KUSSEI 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31696:SF23">
        <property type="entry name" value="PROTEIN MIZU-KUSSEI 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04759">
        <property type="entry name" value="DUF617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="266" mass="29376" checksum="2047C390A6298E8C" modified="2014-02-19" version="1">MNTVIARSSQEMSSKRHFHWTNKVGTEDGEAPASESFSTLTREEKKEDDKVFVAPEAPAPTAATSHVTRKKLQAVAVSRIRSVLTVFNKNRLNSSLGFGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELATPISGLVREMASGLVRIALECDKEKRAEKKSVKLLEEPVWRTYCNGKKCGFASRRECGPKDWDILKAVEPISMGAGVLPGNNNSGAEAGSEGEIMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSVYLLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B207</accession>
    <name>V7B207_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">X8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G213600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B207"/>
    <dbReference type="SMR" id="V7B207"/>
    <dbReference type="STRING" id="3885.V7B207"/>
    <dbReference type="Gramene" id="ESW10486">
        <property type="protein sequence ID" value="ESW10486"/>
        <property type="gene ID" value="PHAVU_009G213600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZZ2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTYNPMP"/>
    <dbReference type="OrthoDB" id="1073427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1040:FF:000007">
        <property type="entry name" value="PLASMODESMATA CALLOSE-BINDING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012946">
        <property type="entry name" value="X8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044788">
        <property type="entry name" value="X8_dom_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044">
        <property type="entry name" value="BETA-1,3 GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044:SF128">
        <property type="entry name" value="CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07983">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00768">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753809" description="X8 domain-containing protein" evidence="5">
        <location>
            <begin position="25"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="X8" evidence="6">
        <location>
            <begin position="129"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="54"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="96"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="213"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="96"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="114"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="4">
        <location>
            <begin position="220"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="237"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW10486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="32959" checksum="CE89B0BF30E86988" modified="2014-02-19" version="1">MGVRSWRHVLFSLCLLFSLGLGKAIRLREEENQEISYEFGTKLDAVPVVNPTTPGTANPYPTLNPTTPQAPGTIGQTPSTPTTPYMTPINPYTNPTTPKTSPTTNPTLIPPSPVTTTTPTTPTASAGGQWCVASQSAAESTLKVALDYACGYGADCSSIQPGASCYNPNTLKDHASYAFNDYYQKNPAPTSCAFGGTATLTTKDPSNGNCRYTSSKTPSMSPPTPIYVSPPTPPSTMTPTTPSTMTPTAPTTMIPTTPGIMTPTAPGMTTIPGGASVYGTGPTGSPNIATPVSHSELLLFTLFGLWASLHVEIYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B311</accession>
    <name>V7B311_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Small ribosomal subunit protein uS17c</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G093100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B311"/>
    <dbReference type="SMR" id="V7B311"/>
    <dbReference type="STRING" id="3885.V7B311"/>
    <dbReference type="Gramene" id="ESW12199">
        <property type="protein sequence ID" value="ESW12199"/>
        <property type="gene ID" value="PHAVU_008G093100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12200">
        <property type="protein sequence ID" value="ESW12200"/>
        <property type="gene ID" value="PHAVU_008G093100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1740">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HPMYGKF"/>
    <dbReference type="OrthoDB" id="274752at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00364">
        <property type="entry name" value="Ribosomal_uS17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000236">
        <property type="entry name" value="30S ribosomal protein S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01345_B">
        <property type="entry name" value="Ribosomal_uS17_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_uS17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019984">
        <property type="entry name" value="Ribosomal_uS17_bact/chlr"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004123">
        <property type="entry name" value="PRK05610.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03635">
        <property type="entry name" value="uS17_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744:SF1">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US17M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="10278" checksum="E7FF9BC6A8DA962C" modified="2014-02-19" version="1">MKQVVGMVVSNKMQKSVVVAVDRLFYHKVYDRYVKRTSKFMAHDEHNHCNIGDKVRLDPSRPLSKRKNWVVAEILKKARIYVPPSPNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B371</accession>
    <name>V7B371_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">type I protein arginine methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.319</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G248200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-arginyl-[protein] + 2 S-adenosyl-L-methionine = N(omega),N(omega)-dimethyl-L-arginyl-[protein] + 2 S-adenosyl-L-homocysteine + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:48096"/>
            <dbReference type="Rhea" id="RHEA-COMP:10532"/>
            <dbReference type="Rhea" id="RHEA-COMP:11991"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29965"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61897"/>
            <dbReference type="EC" id="2.1.1.319"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.1.1.319" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B371"/>
    <dbReference type="SMR" id="V7B371"/>
    <dbReference type="STRING" id="3885.V7B371"/>
    <dbReference type="Gramene" id="ESW10906">
        <property type="protein sequence ID" value="ESW10906"/>
        <property type="gene ID" value="PHAVU_009G248200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1500">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMVEGSD"/>
    <dbReference type="OrthoDB" id="7848332at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070611">
        <property type="term" value="F:histone H3R2 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035242">
        <property type="term" value="F:protein-arginine omega-N asymmetric methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035241">
        <property type="term" value="F:protein-arginine omega-N monomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009909">
        <property type="term" value="P:regulation of flower development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010228">
        <property type="term" value="P:vegetative to reproductive phase transition of meristem"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.70.160.11:FF:000002">
        <property type="entry name" value="Probable histone-arginine methyltransferase CARM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000052">
        <property type="entry name" value="Probable histone-arginine methyltransferase CARM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.160.11">
        <property type="entry name" value="Hnrnp arginine n-methyltransferase1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025799">
        <property type="entry name" value="Arg_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057622">
        <property type="entry name" value="CARM1-like_PH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055135">
        <property type="entry name" value="PRMT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006:SF10">
        <property type="entry name" value="HISTONE-ARGININE METHYLTRANSFERASE CARMER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11006">
        <property type="entry name" value="PROTEIN ARGININE N-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25350">
        <property type="entry name" value="PH_PRMT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06325">
        <property type="entry name" value="PrmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22528">
        <property type="entry name" value="PRMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51678">
        <property type="entry name" value="SAM_MT_PRMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 13" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="10" id="KW-0804">Transcription</keyword>
    <keyword evidence="9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Probable histone-arginine methyltransferase CARM1-like N-terminal PH" evidence="15">
        <location>
            <begin position="17"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Protein arginine N-methyltransferase" evidence="14">
        <location>
            <begin position="296"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00049086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF22528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF25350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW10906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="539" mass="60231" checksum="AA622A67FF66B122" modified="2014-02-19" version="1">MEEETKMEVLVPQKTKQREFALASVSEVSSSSSSSALPGVAVFAGDRLQIRNESNRIVLGAHLTEIQLFRCGPIESVCMVEGSDADNQTSYSSGVAIQFRNEEESEAFHCVFQQWKKEFNVQGGNLPNGTNLITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRSDFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPERADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPIFHVIDFTKIKEEELYEIDIPLKFTATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLNQDQQPKPLDMNIQSQDLDDVEMMQQPSPKSCAQIDSLMQNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B379</accession>
    <name>V7B379_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">allene-oxide cyclase</fullName>
            <ecNumber evidence="3">5.3.99.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G020200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (9S,13S,15Z)-12-oxophyto-10,15-dienoate</text>
            <dbReference type="Rhea" id="RHEA:22592"/>
            <dbReference type="ChEBI" id="CHEBI:36438"/>
            <dbReference type="ChEBI" id="CHEBI:57411"/>
            <dbReference type="EC" id="5.3.99.6"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the allene oxide cyclase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.99.6" evidence="3"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B379"/>
    <dbReference type="SMR" id="V7B379"/>
    <dbReference type="STRING" id="3885.V7B379"/>
    <dbReference type="Gramene" id="ESW11323">
        <property type="protein sequence ID" value="ESW11323"/>
        <property type="gene ID" value="PHAVU_008G020200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPP8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GAKACEP"/>
    <dbReference type="OrthoDB" id="1894474at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046423">
        <property type="term" value="F:allene-oxide cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009695">
        <property type="term" value="P:jasmonic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.480.10">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009410">
        <property type="entry name" value="Allene_ox_cyc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044859">
        <property type="entry name" value="Allene_oxi_cyc_Dirigent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034871">
        <property type="entry name" value="Allene_oxi_cyc_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31843">
        <property type="entry name" value="ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31843:SF10">
        <property type="entry name" value="ALLENE-OXIDE CYCLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06351">
        <property type="entry name" value="Allene_ox_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141493">
        <property type="entry name" value="Allene oxide cyclase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0934">Plastid</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="27435" checksum="A42C144732098299" modified="2014-02-19" version="1">MAAFSSHAVKTIPSSSFLTPVTAKPTSFLTPSITKPFSPFTSSNHSLTKSLKLHSTLTSLPKNSFTCRSQAQPVSSEKVQELSVYEINERDRGSPVYLRLSYKTVNSLGDLVPFSNKLYTGDLQKRIGITSGICILIQNKAEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDSYLAVTGGSGIFEGVKGQVKLHQIVYPFKILYTFYLKGIKDLPQELLVKTVEPIPSVEASPAAKALEPNATIAGFTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3F7</accession>
    <name>V7B3F7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G255600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3F7"/>
    <dbReference type="Gramene" id="ESW10986">
        <property type="protein sequence ID" value="ESW10986"/>
        <property type="gene ID" value="PHAVU_009G255600g"/>
    </dbReference>
    <dbReference type="OMA" id="KGKGWCP"/>
    <dbReference type="OrthoDB" id="1374534at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW10986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="298" mass="33178" checksum="82F1FC527015ED79" modified="2014-02-19" version="1">MGNSHGSKNYSERFPLDDSSVAVLRKTKNRKGSDVEDTWRADYYSHGRRSCELDLTKTKRDKREEELTISICDHVSNNANDDVDFQMKMRVEDDLLLANVTLNGPRSLQQLPERKAPIPQGGVLKSSSFLYGRDNDRKGLIVVLRAKRRDNDEDLPYMITVKHYFVSAWCSHGVSLLAKIRSDRSDGGLSVETEKPCMQPKHEVLCIIDGVKGKGWCPNPTSSDCSMELATNGNVPVISSGGNHNNSNANPFSYSISGQQNISSLISSSGYNKGDYNGSMIFQDCQISIDGFRTLRTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4N9</accession>
    <name>V7B4N9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G122000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4N9"/>
    <dbReference type="Gramene" id="ESW12545">
        <property type="protein sequence ID" value="ESW12545"/>
        <property type="gene ID" value="PHAVU_008G122000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1020991at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753911" description="Knottin scorpion toxin-like domain-containing protein" evidence="1">
        <location>
            <begin position="30"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="71" mass="7435" checksum="E19EC58409FCFC24" modified="2014-02-19" version="1">MASRFSQSLIFGVLLVALVLTSVPEAVIGFTDPGLNCHGPCTPHCNTDCTNKGSKKGFCLQQGSLNLCCCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5I1</accession>
    <name>V7B5I1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_008G086800g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5I1"/>
    <dbReference type="SMR" id="V7B5I1"/>
    <dbReference type="STRING" id="3885.V7B5I1"/>
    <dbReference type="Gramene" id="ESW12128">
        <property type="protein sequence ID" value="ESW12128"/>
        <property type="gene ID" value="PHAVU_008G086800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSINKDI"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="PhylomeDB" id="V7B5I1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388:SF247">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31388">
        <property type="entry name" value="PEROXIDASE 72-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 18" id="KW-0349">Heme</keyword>
    <keyword evidence="18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="19" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="18" id="KW-0964">Secreted</keyword>
    <keyword evidence="19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="30"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="40"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="73"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="126"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="205"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW12128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="34384" checksum="73F2AB88D374687B" modified="2014-02-19" version="1">MGTTLFSINKPIFKIPFFLFLCFIGIVSSQLSTDFYSTTCSNALSTIKTAVDSAVSNEARMGASLLRLHFHDCFVQGCDGSVLLNDTSSFTGEQTAFPNVNSLRGFGVIDNIKSQLESLCPGVVSCADILAVAARDSVVALGGQSWTVQLGRRDSTTASFNSANSDLPGPTFSLQQLVDAFSKKDFTTEEMVALSGGHTIGQAACSSFRTRIYNDTNIDSSFATSLQANCPSVGGDRNLAPLDTSPTTFDNAYFQDLQSQKGLLHSDQELFNGGSTDSQVNGYVSNPSSFQTDFANAMVKMSNLGPLTGSSGEIRTNCWKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5Q5</accession>
    <name>V7B5Q5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PHD-type zinc finger plants domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G179400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5Q5"/>
    <dbReference type="STRING" id="3885.V7B5Q5"/>
    <dbReference type="Gramene" id="ESW13237">
        <property type="protein sequence ID" value="ESW13237"/>
        <property type="gene ID" value="PHAVU_008G179400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0CS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SYELFQC"/>
    <dbReference type="OrthoDB" id="1935489at2759"/>
    <dbReference type="PhylomeDB" id="V7B5Q5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056874">
        <property type="entry name" value="PHD_dom_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33779">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33779:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25054">
        <property type="entry name" value="PHD_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type zinc finger plants" evidence="5">
        <location>
            <begin position="16"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="120"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="70"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="128"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF25054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="198" mass="22034" checksum="423204C7FCAC8CCA" modified="2014-02-19" version="1">MTTKGTSHSAPNTECCMCGDLGFSDQLFQCRVCQFRSQHRYCSNLYPKPESLGTCNWCLSQREDTKEKSGNSSNSSSSIWNNDDESRIKRIKNGINNSAQNMGLKKGPKGSGILHLQIQKPIKKPKSPDSSRSPSASTSPHKSPPVLVSTRKRIVTNGALEERLRRTRSEDIANSGGATKQVFRNKVRRYKLLEEVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B626</accession>
    <name>V7B626_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G190300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B626"/>
    <dbReference type="STRING" id="3885.V7B626"/>
    <dbReference type="Gramene" id="ESW13367">
        <property type="protein sequence ID" value="ESW13367"/>
        <property type="gene ID" value="PHAVU_008G190300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LRTENCD"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd13999">
        <property type="entry name" value="STKc_MAP3K-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.20:FF:000439">
        <property type="entry name" value="Integrin-linked protein kinase family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000763">
        <property type="entry name" value="Os01g0748600 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000180">
        <property type="entry name" value="serine/threonine-protein kinase STY46-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="entry name" value="Ankyrin repeat-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051681">
        <property type="entry name" value="Ser/Thr_Kinases-Pseudokinases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329:SF197">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44329">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="Ankyrin repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50297">
        <property type="entry name" value="ANK_REP_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="ANK" evidence="7">
        <location>
            <begin position="86"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="164"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW13367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="473" mass="53509" checksum="8588B9976FC8C469" modified="2014-02-19" version="1">MHSHNNTIPFSLYSKTLTPAMETEKLQLRFSVGRQSSLAPERGGAEDVAEALDPTVRLMYLANEGDLVGIEELLDSGSDVSFTDIDGRTALHVAACQGRTDVVDLLVRRGADVDPRDRWGSTPLADAMYYKNHDIVKLLEKHGAKPPITPMHVENAREVPEYEIDPSELDFTNSFCITKGTFRIALWRGTQVAVKTLGEEVFTDDDKVKAFLDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLHAYINRKGALKPATAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVTKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENEVPKAYVENERPPFRALPKLYAHGLKQLIEECWDEKPHRRPTFRQIIESLDEINSHLIQKRRWKIGAPGCIQYLEALFRGNRTSPSSRSSRSTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6N2</accession>
    <name>V7B6N2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF2470 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G199500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6N2"/>
    <dbReference type="STRING" id="3885.V7B6N2"/>
    <dbReference type="Gramene" id="ESW13474">
        <property type="protein sequence ID" value="ESW13474"/>
        <property type="gene ID" value="PHAVU_008G199500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DECKREP"/>
    <dbReference type="OrthoDB" id="1873930at2759"/>
    <dbReference type="PhylomeDB" id="V7B6N2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.180.10">
        <property type="entry name" value="PNP-oxidase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037119">
        <property type="entry name" value="Haem_oxidase_HugZ-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13343">
        <property type="entry name" value="CREG1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13343:SF18">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50475">
        <property type="entry name" value="FMN-binding split barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="453" mass="51302" checksum="8060298D02D92E0F" modified="2014-02-19" version="1">MAIRPPASSSLSSPSEGICYTASYGITSNSIKLPIDGRRWHDLASTRYKSSFFGLPHLLWLSTGHDQCLSKVNVAADYSDSIPDSSDHMDEQGYHPLEQLKGSNDTKPARLSPPEMAKTAVEANKSALLAFPAMVHCEPHEQISWAEFEYHIDDFGDIYFEIFDDANLLADRGANNPVNVFIGMDIPIYDNNRRTASEYDIFNNGKGDELFTFVDQDDDVEVSEMEDFNISVNWGRPDATNSVHPIYFSKCLTKAVNNVEYIKRMNHPSNGVSIIGFLRPIYDEERSYLRWTYHTEDGAVYISGSRDSYSNSIDDQGNTNLTLYRLEILKIKLHSMYGYQSEISVLEFQDAEPDILAHSSSEILERFNRFCDDDLKALCKKKGLEAEGAYLVGVDSLGVDVRVFSGAEVKTHRFPFKIQAATINAAAKQIWQLLFPRSRRKKNMKKWRTTTMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B804</accession>
    <name>V7B804_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BAH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G158700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B804"/>
    <dbReference type="SMR" id="V7B804"/>
    <dbReference type="STRING" id="3885.V7B804"/>
    <dbReference type="Gramene" id="ESW12993">
        <property type="protein sequence ID" value="ESW12993"/>
        <property type="gene ID" value="PHAVU_008G158700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSH0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KIWENRD"/>
    <dbReference type="OrthoDB" id="1896853at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.490:FF:000017">
        <property type="entry name" value="Bromo-adjacent homology (BAH) domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.490">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001025">
        <property type="entry name" value="BAH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043151">
        <property type="entry name" value="BAH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47073">
        <property type="entry name" value="PROTEIN ANTI-SILENCING 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47073:SF2">
        <property type="entry name" value="PROTEIN ANTI-SILENCING 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01426">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00439">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51038">
        <property type="entry name" value="BAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BAH" evidence="1">
        <location>
            <begin position="40"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="177" mass="20165" checksum="51FE4C55D7C5AE96" modified="2014-02-19" version="1">MAAPMDEDDLMYEFAWGKKRGMGGKKKDVQFYESFTFEGVQYTLNDAVCLQNESCDVPHIGKLIKIWENRDNSRKVKVQWFFRSGEIRKFLEGIQTKENELFLACGDGKGFANVNPLEAIVGKCNVVCISKNFGNSQLSDEAKADFVFYRFFDVGQRKVVDEIDKIAGTEDKNISTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B822</accession>
    <name>V7B822_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G242200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B822"/>
    <dbReference type="SMR" id="V7B822"/>
    <dbReference type="Gramene" id="ESW13974">
        <property type="protein sequence ID" value="ESW13974"/>
        <property type="gene ID" value="PHAVU_008G242200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1801">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CESTIPF"/>
    <dbReference type="OrthoDB" id="6513042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18808">
        <property type="entry name" value="SF1_C_Upf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000326">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045529">
        <property type="entry name" value="DUF6469"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047187">
        <property type="entry name" value="SF1_C_Upf1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="DNA2/NAM7 HELICASE FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887:SF522">
        <property type="entry name" value="P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20073">
        <property type="entry name" value="DUF6469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6469" evidence="7">
        <location>
            <begin position="99"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase helicase" evidence="5">
        <location>
            <begin position="256"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="domain" description="DNA2/NAM7 helicase-like C-terminal" evidence="6">
        <location>
            <begin position="654"/>
            <end position="851"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF20073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="918" mass="103675" checksum="67DF28B851A3BBED" modified="2014-02-19" version="1">MKKGITCSATEEDDEKHRFLDIVFSWNLKNALNEDLYKNKVQKIPETFRSVSSYLNSFITPLIEETHSDLCSSLKGASRARLCEIIIVDKIVGSSKYPLYQISLNNKSDEVEDEEEENSGKYVPEAGDVFALTDIKPKRIDDLNRPRRFYHIAYVSRPKDSNDEISILSSKPMEVDFNEFMSNKSQKLYAVFLLNLTTNIRVWKALNSVSEDDNLNIIKQVLQPEVISVETCKNCLSGEKDTLHCVTEHCPLQSQNLNKSQDDAVSSCLNMIKCGHSDIKLIWGPPGTGKTKTLACLLFCLLKLKHRSLACAPTNTAILQVAERLHGLVQSSLDYKTYGLGDIVLMGNKSRMRLNSCQGLLDVFLDHRVENLAKCFSPFSGWKHSVESMIHLLEDPKKEYSLYEKENDVIISLEDFVMKEYLDVARAFRAYKQSKMSNDTITLTDYVKLKRNDIFDKFQSKQEKKSIWTIEQFIKQRFQVLTKDLKFCMKTLYTHFPTSLISREQVKNMFEVMDLLDSIEAKLKATDNFVMLGFGERKINSDTFGSSGTMCLNLLRLLSESISLPDIQESGGIDKFCLTNACIVLCTASGSIKLYTNGLSPIKLLVIDEAVQLKECESAIPLKLPGLDHCILFGDEKQLPALVKSKIAEDAEFGRSLFERLVLLGYKKLMLNVQYRMHPSISLFPCNEFYDGNISDGPNVVQSSYSKSFIEGEMYGSFSFINVGKGKEHFGRGGFSSKNMVEAAAISEIIGSLKEEFMRSRKRVSVGIISPYNAQVYEIQEKIKKHTSTSYAGFSVSVRSVDGFQGGEEDIIIISTVRSNGSGKVGFLSNRQRANVALTRARYCLWIVGNAATLVSSDSIWKDLVLDAKKRDCFHNADDDKRLSQAIDMAAFELDLLEETDSRFKKLRLGEIPFKKSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B891</accession>
    <name>V7B891_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G254100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B891"/>
    <dbReference type="SMR" id="V7B891"/>
    <dbReference type="STRING" id="3885.V7B891"/>
    <dbReference type="Gramene" id="ESW14112">
        <property type="protein sequence ID" value="ESW14112"/>
        <property type="gene ID" value="PHAVU_008G254100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0379">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YRHRKND"/>
    <dbReference type="OrthoDB" id="10251809at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="FunFam" id="2.120.10.80:FF:000233">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46175">
        <property type="entry name" value="BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46175:SF4">
        <property type="entry name" value="BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12937">
        <property type="entry name" value="F-box-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24681">
        <property type="entry name" value="Kelch_KLHDC2_KLHL20_DRC7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117281">
        <property type="entry name" value="Kelch motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0880">Kelch repeat</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="2">
        <location>
            <begin position="16"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW14112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="469" mass="52676" checksum="F2345DF2F5556B95" modified="2014-02-19" version="1">MEEYEGSVSGNHSSSGSPITNMAQDYLLTILLLLPIDAILSLSMTCKRFRSLTSSNTLWKYLCKRDLGSTCVEALLNSSNNHHHHQFPWMRLYRQVSLMDSVCCHKLLSEPHADLDFPSARASHSLNFVSDCLVLFGGGCEGGRHLDDTRVAYIGNDFRRMLKWQTVHAGIPSGRFGHTCVEMGDYLVLFGGINDRGNRQNDTWLGQVVLNENKGIAFSWKMLEVDNVAPPPRGAHGACCIDEKRMIIHGGIGLHGLRLGDTWVLELSDSPCHGTWHEIVSYPSPPPRSGHTLTCIGRSRTILFGGRGLGYEVLDDVWLLDTYQGYFKWVQIVYDLQSISDGVSLPRVGHTATLVLGSRLLIYGGEDSYRHRKNDFWVLDISAIPYPYITLQHPTTVSSKKESMARMWKRWKSSGFEARARSFHRACADRSGRYLYVFGGMVDGFLQPSEPSALRFDAELFLVELVLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8G9</accession>
    <name>V7B8G9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G170700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8G9"/>
    <dbReference type="SMR" id="V7B8G9"/>
    <dbReference type="STRING" id="3885.V7B8G9"/>
    <dbReference type="Gramene" id="ESW13133">
        <property type="protein sequence ID" value="ESW13133"/>
        <property type="gene ID" value="PHAVU_008G170700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0236">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TMVMDFA"/>
    <dbReference type="OrthoDB" id="288203at2759"/>
    <dbReference type="PhylomeDB" id="V7B8G9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07042">
        <property type="entry name" value="STAS_SulP_like_sulfate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.750.24:FF:000002">
        <property type="entry name" value="Sulfate transporter 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="entry name" value="STAS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018045">
        <property type="entry name" value="S04_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00815">
        <property type="entry name" value="sulP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="SULFATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SpoIIaa-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="255"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="337"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="377"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="402"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="429"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="470"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="8">
        <location>
            <begin position="539"/>
            <end position="646"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00008692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW13133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="654" mass="71559" checksum="DAC0F32BE7CFDCBD" modified="2014-02-19" version="1">MREQAVFHLEEHGQTERSQWVLDSPNPPPLWKKIFTSVKETILPRGNKFCFSSKRKTSRGHAVSCLQNLFPIISWLRDYKASKFKDDLLAGLTLASLSIPQSIGYATLAKVAPEYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSSLVPKVEDPVANPHAYRNLVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAVIIGLQQLKGLLGISHFTSKTDAVSVLASVYKSLHHQIASGEKWNPLNFVFGCSFLIFILITRFIGRRNRKFFWLPALSPLLSVILSTLIVYLSRADKHGVNIIKHVKGGMNPSSLHQLQLHGPHVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVFLALELFTRLLYYTPVAILASIILSALPGLIDLSEACYIWKVDKLDFLACLGAFLGVLFATVEIGLLVAVIISFAKILIQSVRPGIEVLGRVPRTEAFCDVTQYPMAISTPGITVIRISSGSLCFANANFVRERILKWVSQDEDDLKETSKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVEACLSAKIART</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8M2</accession>
    <name>V7B8M2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G175900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8M2"/>
    <dbReference type="STRING" id="3885.V7B8M2"/>
    <dbReference type="Gramene" id="ESW13198">
        <property type="protein sequence ID" value="ESW13198"/>
        <property type="gene ID" value="PHAVU_008G175900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="77" mass="8844" checksum="698021E048FF2A39" modified="2014-02-19" version="1">MKQYFEQCKKTNQTPLINGSRKEIMRCIHIGDVRPTMATVVLMLNSYSLTLPLPSEPTFVVDSSTRSFPNMLAWEHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9G2</accession>
    <name>V7B9G2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G287500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9G2"/>
    <dbReference type="STRING" id="3885.V7B9G2"/>
    <dbReference type="Gramene" id="ESW14512">
        <property type="protein sequence ID" value="ESW14512"/>
        <property type="gene ID" value="PHAVU_008G287500g"/>
    </dbReference>
    <dbReference type="OMA" id="PKETMPE"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="95"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="161"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="222" mass="24224" checksum="9795A603DC9CA34A" modified="2014-02-19" version="1">MLISFHQNLTLLLYHSQLSSFSITSTFSPIPMATVEVVSAKVALPEDKIEASLKGEEEKKEEIAATPTPTPAPEPESVTEQTNEETTEAPEAAASEDKPSVEVETKEVAEEVVSETATEEPTVEKTEEEISETEAAEEAKENADPVEVKTAEAAEEAVAETQKEDAVKEEKEIAKEEVNTETPEEKSEVEKVETEGSDEKKEEEVIAEGDEKSEEGPTEKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9Y1</accession>
    <name>V7B9Y1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_007G008400g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9Y1"/>
    <dbReference type="SMR" id="V7B9Y1"/>
    <dbReference type="STRING" id="3885.V7B9Y1"/>
    <dbReference type="Gramene" id="ESW14682">
        <property type="protein sequence ID" value="ESW14682"/>
        <property type="gene ID" value="PHAVU_007G008400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU1K">
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    <keyword evidence="5 18" id="KW-0575">Peroxidase</keyword>
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        <location>
            <begin position="1"/>
            <end position="30"/>
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            <begin position="31"/>
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    </evidence>
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        <source>
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        </source>
    </evidence>
    <sequence length="337" mass="37153" checksum="38F726C73511E838" modified="2014-02-19" version="1">MATTSSLSVFGFKLKLCLALLACVIGATSAELNTTQLNTTFYDKTCPGALDVIKKAVKEAVKNESRMGASLLRLHFHDCFVQGCDASVLLDDTDNFTGEKNSFPNANSLRGFEVIDNIKSKLEKMCKGTVSCADILAVAARDSVFELGGPKWEVPLGRRDSTTASLAESNSDLPAPTFDLDDLIRAFHEKNFTVKELVTLSGGHSIGLVRCRFFRTRIYNDSDINQKFAKERQVECPFEGGDNNFSAFDSATPFKLDNSFYKNLLQQKGLVHSDQQLFTNNSTDKTTKNQVISYSRDMGQFKKDFADAMLKMSIITPLTGSAGQIRQNCRLVNPPST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAK2</accession>
    <name>V7BAK2_PHAVU</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G0220001g</name>
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    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
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            <taxon>Fabaceae</taxon>
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            <taxon>indigoferoid/millettioid clade</taxon>
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            <taxon>Phaseolus</taxon>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">cv. G19833</strain>
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        <property type="gene ID" value="PHAVU_007G0220001g"/>
    </dbReference>
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        <property type="component" value="Chromosome 7"/>
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    <proteinExistence type="predicted"/>
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        <location>
            <position position="82"/>
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    </feature>
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            <dbReference type="EMBL" id="ESW14844.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="82" mass="8845" checksum="6D9F1653F724F42D" modified="2014-02-19" version="1" fragment="single">MHAPLTNSTSTLFNRHIAMAFTNLFLAPSFALHGGRVSDPRSIPLLSPPSDVVFLSSTSFSRDRNFIFTSAYNVNAVGSASL</sequence>
</entry>
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    <accession>V7BAY4</accession>
    <name>V7BAY4_PHAVU</name>
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        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
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        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G034500g</name>
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    <organism evidence="7 8">
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        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAY4"/>
    <dbReference type="SMR" id="V7BAY4"/>
    <dbReference type="Gramene" id="ESW14984">
        <property type="protein sequence ID" value="ESW14984"/>
        <property type="gene ID" value="PHAVU_007G034500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIYMGEI"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="178"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="211"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="331"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="375"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="407"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="435"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW14984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="482" mass="52408" checksum="00C3B753A85B2E81" modified="2014-02-19" version="1">MEKGLLIEKEREEEEGGSGVIRWNVFGEEVKRVGYLAGPMVTVTLSQYFLQIISMMMVGHLGKLALSSTAIAISLCAVSGFSVIFGMSCALETQCGQAYGAQQYRKFGVQIYTAIVSLTLACLPLTLLWIYLGKLLIILGQDPLISQEAGKFALCMIPALFAYAALQTLVRFFLMQSLISPLVISSFITLCFHVAFSWLMVFKSGLGNLGAAFSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFHGIGEFIRYAIPSAGMICLEWWSFELIILLSGLLPNPELETSVLSICLNITTTIYTIAESIGSAASTRISNALGAGNPQSARVCVYAAMTLAASEAILVSSIIFAFRQILGYVFSNELDVAFYVTDMAPLLSLSIILDSLHGTLSGIARGCGWQHLGAYVNLGAYYGFGIPTAAILGFWILLGGKGLWIGILTGAFCQTVMLSLITASTNWEEQAIKARERIFQRSFSVEDGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC25</accession>
    <name>V7BC25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PAR1 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G071100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC25"/>
    <dbReference type="STRING" id="3885.V7BC25"/>
    <dbReference type="Gramene" id="ESW15417">
        <property type="protein sequence ID" value="ESW15417"/>
        <property type="gene ID" value="PHAVU_007G071100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0KN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESTFTHK"/>
    <dbReference type="OrthoDB" id="772928at2759"/>
    <dbReference type="PhylomeDB" id="V7BC25"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009489">
        <property type="entry name" value="PAR1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33649">
        <property type="entry name" value="PAR1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33649:SF2">
        <property type="entry name" value="PAR1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06521">
        <property type="entry name" value="PAR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756543" description="PAR1 protein" evidence="1">
        <location>
            <begin position="27"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="191" mass="20654" checksum="F24287977161EE73" modified="2014-02-19" version="1">MASNFSFRTFMVFFLAFSLTLEATLGGTECENLSHETCSFAVSSGGKRCVLEKRVKRSGEEEYTCKTSDIEAENLKDHIETDQCIKACGLDRNSLGISSDSLLESTFTHKLCSPHCYHFCPNVVDLYFNLAAGEGVFLPKLCEVEGVNARRGMAELRSSGIVAPGPVHSVELAASPPINPVELSAVAPSPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDA4</accession>
    <name>V7BDA4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G081500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDA4"/>
    <dbReference type="SMR" id="V7BDA4"/>
    <dbReference type="Gramene" id="ESW15550">
        <property type="protein sequence ID" value="ESW15550"/>
        <property type="gene ID" value="PHAVU_007G081500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTFSFMH"/>
    <dbReference type="OrthoDB" id="1917168at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000525">
        <property type="entry name" value="Pentatricopeptide (PPR) repeat-containing protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000755">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF386">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="284"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="355"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW15550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="470" mass="52478" checksum="DA1EDBAFA108B125" modified="2014-02-19" version="1">MSKSNIFELLHQCRVSADDSAIKKLHAQLLRTGMIFLSHHLHTQLIATYAACLPNTNLHLLKNFFKCMNSTNPLHFNAIISDFCRKGFPFLALASFSFMHTNGVPLDTYALCSTLTASSKVKDLNFGKQIHTQGVKSGWSSSVFVGSALIDFYSKLSNVQDATLMFDEIPEKNTVCANALLSGYAEAGLWARELELVRKMHVLKLKHDHFTLSAALRACTGLSAVEMGRQVHGYLLRTIPDVESDVFLQSALIEMYGKCGLVKKAWQVFQLVGMEIRKEGRSRDIVLWTSMLGVYGRNGHYKEVVDLYDEMWLEGIRPDGITFLTVISACGRTGQVHAGVKYFESMANEFKIDHGPEHYSCLVDLLCRAGELQRAWELLNEALFKGMGNCTISMWGALLSACVDRGNLDIGKLAAQRALELDPQNVGICIMLSNLYARFGMWEEIGDLRALIKTRGLRKDVGCSWVQVTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDM5</accession>
    <name>V7BDM5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G114600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDM5"/>
    <dbReference type="Gramene" id="ESW15927">
        <property type="protein sequence ID" value="ESW15927"/>
        <property type="gene ID" value="PHAVU_007G114600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S05K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GNNKHQP"/>
    <dbReference type="OrthoDB" id="1921318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34395:SF15">
        <property type="entry name" value="OS09G0292400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34395">
        <property type="entry name" value="OS11G0427500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="129" mass="14261" checksum="67537C1F324A183A" modified="2014-02-19" version="1">MAYVDEDGSSDSGEDVHMLDGHKRHQVVVPSGSGGRKRSRKANGDAIVEAMLEIAAASKMRANAILKNEDRFSISKCIKVLDELQGVDEQLYFLALDLFENNSSAREIFISLKGEKRLPWLQCKLSAPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDP5</accession>
    <name>V7BDP5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G116500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNF2/RAD54 helicase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDP5"/>
    <dbReference type="STRING" id="3885.V7BDP5"/>
    <dbReference type="Gramene" id="ESW15947">
        <property type="protein sequence ID" value="ESW15947"/>
        <property type="gene ID" value="PHAVU_007G116500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1015">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2020972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044574">
        <property type="entry name" value="ARIP4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45797:SF1">
        <property type="entry name" value="HELICASE ARIP4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45797">
        <property type="entry name" value="RAD54-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="49"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW15947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14044" checksum="E841C66D6F59E844" modified="2014-02-19" version="1">MEGKTEDEMLDIESASSGSFNDDSDDEESVVPEIDDGVNLEEPLTEEEIQDLISELLEVESKAAEAQEALEEESLSKVEIEVRQELKQNLQAEDLETAVADEMAAFKEEWEAVLDDLETESAHLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEE5</accession>
    <name>V7BEE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">aminocyclopropanecarboxylate oxidase</fullName>
            <ecNumber evidence="9">1.14.17.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G135600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="8">Alkene biosynthesis; ethylene biosynthesis via S-adenosyl-L-methionine; ethylene from S-adenosyl-L-methionine: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.17.4" evidence="9"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEE5"/>
    <dbReference type="SMR" id="V7BEE5"/>
    <dbReference type="STRING" id="3885.V7BEE5"/>
    <dbReference type="Gramene" id="ESW16182">
        <property type="protein sequence ID" value="ESW16182"/>
        <property type="gene ID" value="PHAVU_007G135600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RANTMEM"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="PhylomeDB" id="V7BEE5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009815">
        <property type="term" value="F:1-aminocyclopropane-1-carboxylate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071398">
        <property type="term" value="P:cellular response to fatty acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009693">
        <property type="term" value="P:ethylene biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009835">
        <property type="term" value="P:fruit ripening"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000002">
        <property type="entry name" value="1-aminocyclopropane-1-carboxylate oxidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050295">
        <property type="entry name" value="Plant_2OG-oxidoreductases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47991">
        <property type="entry name" value="OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0266">Ethylene biosynthesis</keyword>
    <keyword evidence="7" id="KW-0292">Fruit ripening</keyword>
    <keyword evidence="6 10" id="KW-0408">Iron</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="12">
        <location>
            <begin position="153"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="107"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00037892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00039090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW16182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="305" mass="34840" checksum="CF67797A41EEF261" modified="2014-02-19" version="1">MENFPVINLANINGEEKKATLEQIEDACKNWGFFELVNHGIPQELLDRVERLTKEHYRKCMEKRFNEAVRSKGLDCVQDELKDMDWESTFFLRHLPTSNISEIPDLAQEYREAMKEFAEKLEKLAEELLEVVCENLGLEKGYLKKAFYGSRGPNFGTKVANYPACPKPEMVKGLRAHTDAGGIILLLQDDKVSGLQLLKDGQWVDVPPMRHSIVVNLGDQLEVISNGKYKSVEHRVIARSDGTRMSVASFYNPGNDALIYPAPPLLEREAMYPTFVFEDYMKLYSTVKFQPKEPRFQAIKALNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGD2</accession>
    <name>V7BGD2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Translationally-controlled tumor protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G197200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in calcium binding and microtubule stabilization.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the TCTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGD2"/>
    <dbReference type="SMR" id="V7BGD2"/>
    <dbReference type="STRING" id="3885.V7BGD2"/>
    <dbReference type="Gramene" id="ESW16944">
        <property type="protein sequence ID" value="ESW16944"/>
        <property type="gene ID" value="PHAVU_007G197200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1727">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAMITEG"/>
    <dbReference type="OrthoDB" id="10248936at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032502">
        <property type="term" value="P:developmental process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.10:FF:000003">
        <property type="entry name" value="Translationally-controlled tumor protein homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.10">
        <property type="entry name" value="Metal Binding Protein, Guanine Nucleotide Exchange Factor, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011323">
        <property type="entry name" value="Mss4/transl-control_tumour"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034737">
        <property type="entry name" value="TCTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018103">
        <property type="entry name" value="Translation_control_tumour_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018105">
        <property type="entry name" value="Translational_control_tumour_p"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11991:SF17">
        <property type="entry name" value="TRANSLATIONALLY CONTROLLED TUMOR PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11991">
        <property type="entry name" value="TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00838">
        <property type="entry name" value="TCTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01653">
        <property type="entry name" value="TCTPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="Mss4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01002">
        <property type="entry name" value="TCTP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01003">
        <property type="entry name" value="TCTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51797">
        <property type="entry name" value="TCTP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TCTP" evidence="7">
        <location>
            <begin position="1"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW16944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="168" mass="19133" checksum="FF522C4210A8AB4F" modified="2014-02-19" version="1">MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVNVDIGANPSAEGGEDDDGVDDQAVKVVDIVDTFRLQEQPSYDKKQFVTFIKRYIKLLTPKLEAEKQELFKKHIEGATKFLLPKLKDLQFFVGESMHDDGSLVFAYYKEGATNPTFIYFAYGLKEIKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGK9</accession>
    <name>V7BGK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SHSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G173200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGK9"/>
    <dbReference type="STRING" id="3885.V7BGK9"/>
    <dbReference type="Gramene" id="ESW16640">
        <property type="protein sequence ID" value="ESW16640"/>
        <property type="gene ID" value="PHAVU_007G173200g"/>
    </dbReference>
    <dbReference type="OMA" id="FVEETPH"/>
    <dbReference type="OrthoDB" id="1922291at2759"/>
    <dbReference type="PhylomeDB" id="V7BGK9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd00298">
        <property type="entry name" value="ACD_sHsps_p23-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33879">
        <property type="entry name" value="17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33879:SF21">
        <property type="entry name" value="SHOCK 22 KDA PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="137" mass="15025" checksum="33A6BAA0025F1635" modified="2014-02-19" version="1">MVNPFAEKSSHRGVVSPVPNKLLRLPHVFSKILELPCLSDHDVFVEETPHFFRFVAPCNAAGVRALAIEILPGITKIVIKRMDGTDVAVAGQPHHVSLGVGLWRFRLPPWTQPEMVTAVCSGGKLMVTVPKNKNKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGQ9</accession>
    <name>V7BGQ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G127300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the major facilitator superfamily. Phosphate:H(+) symporter (TC 2.A.1.9) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGQ9"/>
    <dbReference type="SMR" id="V7BGQ9"/>
    <dbReference type="STRING" id="3885.V7BGQ9"/>
    <dbReference type="Gramene" id="ESW16078">
        <property type="protein sequence ID" value="ESW16078"/>
        <property type="gene ID" value="PHAVU_007G127300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0252">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GLYHVRA"/>
    <dbReference type="OrthoDB" id="433512at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036377">
        <property type="term" value="P:arbuscular mycorrhizal association"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031669">
        <property type="term" value="P:cellular response to nutrient levels"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd17364">
        <property type="entry name" value="MFS_PhT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000175">
        <property type="entry name" value="Inorganic phosphate transporter 1-6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004738">
        <property type="entry name" value="Phos_permease"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00887">
        <property type="entry name" value="2A0109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24064">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 22 MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0769">Symport</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="163"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="212"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="350"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="374"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="405"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="444"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="474"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="10">
        <location>
            <begin position="24"/>
            <end position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00044504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW16078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="528" mass="58000" checksum="209254F2A4A49843" modified="2014-02-19" version="1">MGEKSLQVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYTEGHDNPGSLPPNVSAAINGVAFCGSLAGQLFFGWLGDKMGRKRVYGMTLMLMVISSIASALSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIAAVFAMQGFGILAGGVVAIVVSAVFNALYPAPPFQVNPLLSTVPQADYVWRIVLMFGALPALITYYWRMKMPETARYTALVAKNAKQAAEDMSKVLQVEIQVEPEKVEQLDGRRGRGNEFGLFTKQFLLRHGLHLLGTATTWFLLDIAYYSQNLFQKDIFSAIGWIPPAKTMNAIQEVSKIARAQTLIALCSTVPGYWFTVAFIDKIGRFTIQLMGFFFMTVFMLALAIPYHHWTMNGNQIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNGIGLRNTLIVLSVINFFGFLFTFLVPESKGKSLEEMSGEAEENNTVITESAVETDLEITTSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHT0</accession>
    <name>V7BHT0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNase H type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G241000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHT0"/>
    <dbReference type="STRING" id="3885.V7BHT0"/>
    <dbReference type="Gramene" id="ESW17453">
        <property type="protein sequence ID" value="ESW17453"/>
        <property type="gene ID" value="PHAVU_007G241000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17454">
        <property type="protein sequence ID" value="ESW17454"/>
        <property type="gene ID" value="PHAVU_007G241000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SVAWRAC"/>
    <dbReference type="OrthoDB" id="1348681at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06222">
        <property type="entry name" value="RNase_H_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044730">
        <property type="entry name" value="RNase_H-like_dom_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052929">
        <property type="entry name" value="RNase_H-like_EbsB-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026960">
        <property type="entry name" value="RVT-Znf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47074">
        <property type="entry name" value="BNAC02G40300D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47074:SF48">
        <property type="entry name" value="POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13456">
        <property type="entry name" value="RVT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13966">
        <property type="entry name" value="zf-RVT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Reverse transcriptase zinc-binding" evidence="2">
        <location>
            <begin position="11"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="RNase H type-1" evidence="1">
        <location>
            <begin position="169"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="323" mass="35470" checksum="9545F3CC0F3E43D3" modified="2014-02-19" version="1">MVHSKSVLDSEAKVWRGIWHAEAPARCRSVAWRACKEELPVKSLLVQKRILDDATCPCCGNGAETTAHALLHCEEIKRVWFASPLGLRVEALSGVTSVSQLIEQCVSVLDEKAMGMVCAIIWSVWHRRNVRLWKDKKLDCKHVMGRAWSVIARQKWAPPPVQHVKANFGAVVRDSVGTGMGVVFRNSLGVVLASGTNLLEDETFEPEIGGALCYKWAVEQSGELGFSNVIFETDCKVLHSQWNLITEGKGSSGVSFLDSLLEDCKVMIDGTGSSFSLVRPTANKVAQRLAAAAFDYGEKIWMKVVPEEASLDLQSDMPASADK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIC7</accession>
    <name>V7BIC7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_007G259200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7BIC7"/>
    <dbReference type="STRING" id="3885.V7BIC7"/>
    <dbReference type="Gramene" id="ESW17674">
        <property type="protein sequence ID" value="ESW17674"/>
        <property type="gene ID" value="PHAVU_007G259200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0391">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKDGYAD"/>
    <dbReference type="OrthoDB" id="372624at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000812">
        <property type="term" value="C:Swr1 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006338">
        <property type="term" value="P:chromatin remodeling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18003">
        <property type="entry name" value="DEXQc_SRCAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10810:FF:000005">
        <property type="entry name" value="Photoperiod-independent early flowering 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.850:FF:000006">
        <property type="entry name" value="Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:002272">
        <property type="entry name" value="protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.850">
        <property type="entry name" value="SWI2/SNF2 ATPases, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014012">
        <property type="entry name" value="HSA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050520">
        <property type="entry name" value="INO80/SWR1_helicase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685:SF1">
        <property type="entry name" value="HELICASE SRCAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45685">
        <property type="entry name" value="HELICASE SRCAP-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07529">
        <property type="entry name" value="HSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00573">
        <property type="entry name" value="HSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51204">
        <property type="entry name" value="HSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HSA" evidence="13">
        <location>
            <begin position="22"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="11">
        <location>
            <begin position="526"/>
            <end position="691"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="12">
        <location>
            <begin position="1058"/>
            <end position="1208"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="154"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="275"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="406"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1464"/>
            <end position="1555"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1913"/>
            <end position="1963"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="8"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="154"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="193"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="275"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="311"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="422"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="1464"/>
            <end position="1479"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="1480"/>
            <end position="1494"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="1925"/>
            <end position="1944"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW17674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2035" mass="232180" checksum="08A431B6B61D9012" modified="2014-02-19" version="1">MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATRGEKKMKEEEHRLRKVALNISKDVKKFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDTHKSGENNSAEHHMSIQHKDVHGDVINEPKEADVVEYQSDAADNDDEYDVQSDDESEDDERTIEQDEAFITKEERQEELEALHNEMDLPIEELLKRYAGEKGESVMKESSPEHSEDVEKIVRTTGDENGDDHLSVSKIDPNNSSMVSGRRCDESNGDVATPTNNLSQCEDGQSENLKGVPSETANEDFAYDFTDEEEDGDFLLGTEEKDDETTLSEEEKLERVDAIDPNDEIALLQKESDMPVEELLARYKRDLSDNKDGGYESDYASALSEDHSDSPVHEDAGQKDSSIPMDEDIKSGEHLATIQSQADEHWESPHENLDQRESEHIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEGEEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDICGIDIQLSSSVCTMLLPSPFSVVDLRGLGLLFTDLDYSMAAWESDEVQAIETPATSIMERTDIDELEVIRPLKYQNKLQGTNIFEDIQKKIWEERLNQAKERAAAIAWWNSLRCKKRPMYSTTLRDLVTLRHPVYDIHQVKANPASYMYSTKLADIVLSPIERFQKITDVVESFMFAIPAARAPSPVCWCSTSETNVFLQPSYKQQCSEVLLPLLSPIRLAIVRRQVYFPDRRLIQFDCGKLQELANLLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISDSTIEENILKKANQKRALDNLVIQSGAYNTEFFKKLDPMEIFSGHRTLSIKNMPKEKNQNNGEVSVTNADVEAALKCVEDEADYMALKKVELEEAVDNQEFTEEAIGRLEEDEYVNEDDETAELGDSVSNLNKENALLLNGSDHKEDRPPNSVAVKEDDADVLADVKQIAAAAAAAGQAISAFENELRPIDRYAIRFLELWDPIIDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADFATMAYRQQVEALAQHQLMEELEYEARLKEAEEEACDSKKTTPGDLKPKPKKKPKKAKFKSLKKGSLTSGLKPVKEESQAEPMNIDDEDVTALDFVSPNSTMQKKRKSKVRTDGEEKRLKKSKKFKRDHHDIYASDLESNALVVQYEHSESKTCDSLVDLEQKTAGRGKMGGKISITPMPVKRIWTIKPEKMRKGNHWSKDCIPSADFWLAQEDAILCAVVHEYGPNWSLVSDILNSMTAGGSYRGRYRHPVHCCERFRELFQKNVLLMDNANNEKIITPGSGKALLKVTEDNIRMLLDVASEQVNRELLLQKHFFALLSSAWKVASHVDRRQNPSPTCNGLYFDQSHFTSICQPSQNSLKKSSERMPFANLAQSKKLVAAALDDTTSGQVNDRVILSNQGDGMPMSADQLDITLEFPKEESDVLALFPSVINLSIHGTEPAASLSKQTGEDDFKVGLFIAENRFREATRICEEDISGWASSAFPTSDARSRPGSRIQSSGKQKSSISDSAKPSRSKSKRASIDPSEMPHHQADSIFQSVPSLKDLRFDLASFTTDEVGLNAVDRCFPFDLNGESSWEMEGVGMIPHDYVTGLISDLDDLYFIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BII6</accession>
    <name>V7BII6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Actin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G260000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the actin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BII6"/>
    <dbReference type="SMR" id="V7BII6"/>
    <dbReference type="STRING" id="3885.V7BII6"/>
    <dbReference type="Gramene" id="ESW17682">
        <property type="protein sequence ID" value="ESW17682"/>
        <property type="gene ID" value="PHAVU_007G260000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17683">
        <property type="protein sequence ID" value="ESW17683"/>
        <property type="gene ID" value="PHAVU_007G260000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0676">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THNTIHA"/>
    <dbReference type="OrthoDB" id="2011723at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048767">
        <property type="term" value="P:root hair elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd10224">
        <property type="entry name" value="ASKHA_NBD_actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000291">
        <property type="entry name" value="Actin, alpha skeletal muscle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.640.10:FF:000001">
        <property type="entry name" value="Actin, muscle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000404">
        <property type="entry name" value="Major actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000058">
        <property type="entry name" value="Putative actin-related protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020902">
        <property type="entry name" value="Actin/actin-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004001">
        <property type="entry name" value="Actin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00022">
        <property type="entry name" value="Actin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00190">
        <property type="entry name" value="ACTIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00268">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00406">
        <property type="entry name" value="ACTINS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00432">
        <property type="entry name" value="ACTINS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01132">
        <property type="entry name" value="ACTINS_ACT_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="377" mass="41687" checksum="94EE16D24F0649FD" modified="2014-02-19" version="1">MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYSLPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYDESGPSIVHRKCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIT9</accession>
    <name>V7BIT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G194600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIT9"/>
    <dbReference type="SMR" id="V7BIT9"/>
    <dbReference type="STRING" id="3885.V7BIT9"/>
    <dbReference type="Gramene" id="ESW16913">
        <property type="protein sequence ID" value="ESW16913"/>
        <property type="gene ID" value="PHAVU_007G194600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSH7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMMCEEC"/>
    <dbReference type="OrthoDB" id="778365at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043561">
        <property type="entry name" value="LHW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025610">
        <property type="entry name" value="MYC/MYB_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196:SF1">
        <property type="entry name" value="TRANSCRIPTION FACTOR EMB1444-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14215">
        <property type="entry name" value="bHLH-MYC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23176">
        <property type="entry name" value="bHLH_LHW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="552"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="537"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="553"/>
            <end position="565"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW16913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="741" mass="82217" checksum="18E7DA308AB12A42" modified="2014-02-19" version="1">MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYDNPNICDSSENKSCQNTWERIGSADFSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHRWICVDNQVTSSVPSFEFADGWQSQFSAGIRTIVVIAVVPLGVVQLGSLNKVAEDMGVITCIRSLFLSNQDYTICHAPNQLQNSLKNSSSVMDSETSESVPAYLQTTEKTMKHELLDNIMPFQCPGNNDSPHAVYEKTTVDVAKHEGPELNSDGSSILLQSMSNMMNVEQQKLLGMRPVNERKFEGNSSGREDTSVESGKKLSSFLHNLVTDNNGVNDLVCPSENAGVNSVSFSSDFLDTVVCESEKFHYVDINQKGVKNWSRPLDAYSQKDTGMSKFQTEPCSKDTTYTLKFPAGYELHEALGPSFLKESKYFDWAVKANQDVKATEISDEISCSQLTSEPQREHLLEAMVANIGHNNNVNSKLSVSATMQAAIASGGNPEGSIHTVHTINSESCSIDQPHLGREEKHYSLSSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTKHADKLNKFGDTKTKLHHIQKDINGSSSYQQGSSWAMEVGGHLKVCSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEGRSEGQNNRNLHRLDILWPLVQLLQSKSTMHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJI4</accession>
    <name>V7BJI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G017400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJI4"/>
    <dbReference type="Gramene" id="ESW18154">
        <property type="protein sequence ID" value="ESW18154"/>
        <property type="gene ID" value="PHAVU_006G017400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMMEGDV"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000027">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000065">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1365">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW18154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="466" mass="52818" checksum="A17A0CFDADEDA1CB" modified="2014-02-19" version="1">MDSPQTPKRHIVCVPYPAQGHINPMMQLAKILRCMGFHITFVNSEYNHKRFIKSHGPEFVKGFPDFVYETIPDGLPPSDKDATQDIPMLCDSTRKTCYGPFKDLVLKLNASENVPPISCIIADGIMGVIGKVAKDMGIPEIQLWTASVCGYLGYLQFDELVEQGMVPFKDQKEIDEALDLNLDWIKGMSNMRLRDLPSFIRGRNCLKSSAVIINTFEDLDEEGLEVLRSYNPNIYTIGPLDLLGRHFPEKEKGFMSVGSSLWKNDSNCLTWLNKWEPNTVVYVNFGSIAVMTAEHLREFAWGLANSKLPFLWIKRADIVAGDSEDLPQEFFDEIKDRGYITSWCMQEKVLSHPSVGVFLTHCGWNSTLEGIYAGVPMICWPFFSDQHTNCRYICANWGVGMEINQDVKRDEICELVTEMIKGEKGKEIRQKSLEWKKKAIKATDVGGSSYNNIQKLIKDVSSRNAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ24</accession>
    <name>V7BQ24_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G060200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ24"/>
    <dbReference type="Gramene" id="ESW18671">
        <property type="protein sequence ID" value="ESW18671"/>
        <property type="gene ID" value="PHAVU_006G060200g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="66" mass="7723" checksum="1CB6259D8D49F8E9" modified="2014-02-19" version="1">MTPRTQPRRNPSCVRTRRHYLIRVDGVAAVATRMRRVVTTVQQFEFLTLNSKEFTTTTTQDILISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQS2</accession>
    <name>V7BQS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_006G121700g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQS2"/>
    <dbReference type="SMR" id="V7BQS2"/>
    <dbReference type="STRING" id="3885.V7BQS2"/>
    <dbReference type="Gramene" id="ESW19400">
        <property type="protein sequence ID" value="ESW19400"/>
        <property type="gene ID" value="PHAVU_006G121700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RGFDMRD"/>
    <dbReference type="OrthoDB" id="196131at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00268">
        <property type="entry name" value="DEADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000008">
        <property type="entry name" value="ATP-dependent RNA helicase RhlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000079">
        <property type="entry name" value="probable ATP-dependent RNA helicase DDX17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044742">
        <property type="entry name" value="DEAD/DEAH_RhlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001202">
        <property type="entry name" value="WW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036020">
        <property type="entry name" value="WW_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00397">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00456">
        <property type="entry name" value="WW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51045">
        <property type="entry name" value="WW domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01159">
        <property type="entry name" value="WW_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50020">
        <property type="entry name" value="WW_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0347">Helicase</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="WW" evidence="15">
        <location>
            <begin position="20"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="18">
        <location>
            <begin position="504"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="16">
        <location>
            <begin position="535"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="17">
        <location>
            <begin position="738"/>
            <end position="882"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="76"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="230"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="885"/>
            <end position="1180"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="13">
        <location>
            <begin position="504"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="86"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="158"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="14">
        <location>
            <begin position="901"/>
            <end position="988"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="14">
        <location>
            <begin position="998"/>
            <end position="1012"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="1013"/>
            <end position="1036"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="14">
        <location>
            <begin position="1060"/>
            <end position="1098"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="1102"/>
            <end position="1125"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="1138"/>
            <end position="1157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00037449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW19400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1180" mass="128286" checksum="25FCAB8B246D54ED" modified="2014-02-19" version="1">MATAEAAPAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPLTPPLPAPVASAPSLAPIPVAHTMQAGGMGPQHGQQLMQGQPSQQQVGHLAQQHGQSMPQQQQQSPHMVQATQQKPSQGPQSSQQQNSLMTQSGPQPGLHQARQQMMQPHGQQMMQQPQGQQIQHQMPPQAIHSQHFGQGMPQDHGSHIVPPQVHQFPNQNMHYMSYQQNIITPRQSNSQHIQPNTVSPGQPNPQQVQHSMHGQPFENQQTAFPKVEEAEFKNGSQVGLSPSQYPQRSTLPVQNNQNLPADTASGQMPNVGVNAGQPQQFRTALSGSVHQSPSAMPLQQGGSDLYYQHGPNFHKQMSPGMMHGHPSNVHPAGQKMSHEDNLRSRAGNEYYYNSNKDMPTMGRRQPDMTQIPVPRNPQDMRVGNAPFQNVMPSGNGSAIAGNAIPSMFVPPMGGPSPLSSNTLMRPSYMGSSEASDLSPAEIYCQQHEVTATGGDIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLIPAFILLRQRHNNSLNGPTVLVLAPTRELATQIHNEVIKFGRSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVDEIPARRQTLMYTATWPKEVRKIAGELLVNPVQVNIGSADELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNIGRTFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGPSNFGKERGGMSRFDSGGGRWETGGRGSMRDGGFGGRGGIRDGGFGGRGGGMRDGGFGGRGGGMRDGGFGGRGGGMRDGGFGGRGGGGFGGRGGMRDGAGGRGDYFPGRGNRGRGSGGPRGGHVGWGRGERGMDDRGLGRGRFDNRRDVSYKNRGRSYSRSPERVRTWDYSRSSSRSRSRSRSRSWSRGRSRSRSWSRGRSYSRSRSRSRSHSRSPSYDRRDRSVQPLPDQKDLRAHEVGTSDPRMLPLSPGPGTQANSSLGNEQVEQQPVVGSSDPGNPEAVAADLSHQSSSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR01</accession>
    <name>V7BR01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein EXORDIUM-like 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G205300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
            <location evidence="1">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the EXORDIUM family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR01"/>
    <dbReference type="STRING" id="3885.V7BR01"/>
    <dbReference type="Gramene" id="ESW20394">
        <property type="protein sequence ID" value="ESW20394"/>
        <property type="gene ID" value="PHAVU_006G205300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WWRTTSL"/>
    <dbReference type="OrthoDB" id="2017091at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006766">
        <property type="entry name" value="EXORDIUM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31279:SF3">
        <property type="entry name" value="PROTEIN EXORDIUM-LIKE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31279">
        <property type="entry name" value="PROTEIN EXORDIUM-LIKE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04674">
        <property type="entry name" value="Phi_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0052">Apoplast</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756996" description="Protein EXORDIUM-like 2" evidence="6">
        <location>
            <begin position="25"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW20394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="289" mass="30530" checksum="70154760CC117625" modified="2014-02-19" version="1">MDSKCLLAVVLCGVLSLLNSGAVAQKLVLNYHNGALLKGRFTVNILWYGSFTPIQRSIIVDFVNSLSFPSGAQSPTVASWWQTTEKYKGGSTTLAVGKQITEEYSAGKHLTENQLRSLASRFNDVAAINLVLTAKDVAVDGFCGSRCGTHNSINGKIPYVWVGNSETQCPAQCAWPFHKPTFGPQTPPLVAPNGDVGVDGMIINIATLLAGTVTNPFNGGYYQGPSSAPLEAVSACVGIFGSGAYPGYPGRVLVDKATGASYNAHGSHGRKFLLPAMWDPASSLCKTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BT35</accession>
    <name>V7BT35_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G044100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BT35"/>
    <dbReference type="SMR" id="V7BT35"/>
    <dbReference type="STRING" id="3885.V7BT35"/>
    <dbReference type="Gramene" id="ESW21129">
        <property type="protein sequence ID" value="ESW21129"/>
        <property type="gene ID" value="PHAVU_005G044100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0HG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RREVGTH"/>
    <dbReference type="OrthoDB" id="1909848at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd01610">
        <property type="entry name" value="PAP2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003832">
        <property type="entry name" value="DUF212"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31446">
        <property type="entry name" value="ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31446:SF2">
        <property type="entry name" value="ACID PHOSPHATASE_VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02681">
        <property type="entry name" value="DUF212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="273" mass="29518" checksum="EDBF31AB98A9FDFE" modified="2014-02-19" version="1">MLLQHSMFCAIPPSHTFSLFTPSLKQRNPFLHHLSFPRKPKTSTFRISSLGPGFLDDIVQIAHNKVLIAAGVSLAIGQLSKLFTSVFLYGKEFDIRVIVQAGGFPSSHSSATVACATLFGLERGFSDPIFGLAVVYAGLIMYDAQGVRREVGTHARVLNKLLLQMQANSLHSKDGDSLINSQSGLSKQLKIEDFEKSLLSQEATLEPQQANGGLLVKSGSKISQTEEEEEGISKLAVDGIPPLKESIGHTEIEVIAGALLGFLVALVVYNNIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV89</accession>
    <name>V7BV89_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_005G110900g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV89"/>
    <dbReference type="SMR" id="V7BV89"/>
    <dbReference type="Gramene" id="ESW21922">
        <property type="protein sequence ID" value="ESW21922"/>
        <property type="gene ID" value="PHAVU_005G110900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTV8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NESGRIW"/>
    <dbReference type="OrthoDB" id="1741851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000060">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000330">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000009">
        <property type="entry name" value="Receptor-like serine/threonine-protein kinase SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF798">
        <property type="entry name" value="S-LOCUS LECTIN KINASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00473">
        <property type="entry name" value="PAN_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0430">Lectin</keyword>
    <keyword evidence="14 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 21" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755049" description="non-specific serine/threonine protein kinase" evidence="21">
        <location>
            <begin position="27"/>
            <end position="984"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="586"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="23">
        <location>
            <begin position="27"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="24">
        <location>
            <begin position="331"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="668"/>
            <end position="954"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW21922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="984" mass="110933" checksum="8785DE32C25CCFC3" modified="2014-02-19" version="1">MKREGVVLSFYLLLLWLLLCFQICLGGDTLKATQKITDQRNLVSSNATFELGFFSPPGVKSGEKRYLGIWYHKLEPQTVVWVANRDDPVADSSGVFRIAEDGNVVVEYASKSLWSSKLEPSSSTNRTLKLLDSGNLVLIDDSETTYPWESFKNPTDTFLPGMKMEATLSLTCWRNSADPTPGSFTFKLTQQEGKQSFRVQKETQIYWALDEPDTEAASQMVFNLLNNDISSNKSYSYSNKTLFVSQPSMYNKSRLLMNSSGEIVFLQWDEKEFQWNKKWWMPKDKCDTHNYCGNFGICNRENYFPRCKCLPGFISNVESNSEGCRRKSISCTNKDVTFLNLTNIKLGNPDQRNYTETEAECQSTCINMCSETQCQAYSFNNSIYGDRGSSSCNIWTRNLPSLLENFPRGRDLSILVNTADIAPTAKSCEPCGTYAIPYPLSTGPNCGDPSYNKFNCTKSTGKVSFMMRGGISYPVTEIDEDNRMFFIQPDYSNSLNPSFNPQNSIDFPFSLAEYTEGVVIKINWRPAPEPPCSKPIDCLNWPHSTCRATREGEIRCHCDSNYIWNATIMRCTQEEPSGNHSTLLELILLVTLCSLATVACITGFGIVWKKKKARKLDGASTRIQESLHESERHVKGLIGLGSLEEKDIKGVEVPCYTFASILAATDNFSDSNKLGRGGYGPVYKGTFPGGQEIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGVEKILLYEYMSNKSLDSFIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNVLLDEEMNPKISDFGLAKIFGGKETEASTERVMGTFGYMAPEYALDGFFSVKSDVFSFGVVLLEILSGKKNTGFFESKQISSLLGYAWNLWSGNKLLDLMDSCLGETCNQNQFIKCAIIGLLCTQDEPIDRPTMSNILYMLDKETTTMPIPRQPTFFMTKRYSSSASSSTNPEISLHLDTSYQEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXR3</accession>
    <name>V7BXR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 15">3-isopropylmalate dehydrogenase</fullName>
            <ecNumber evidence="6 15">1.1.1.85</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_005G181600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>(2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl-2-oxopentanoate + CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:32271"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.85"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="15">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="15">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 15">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 15">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.85" evidence="6 15"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXR3"/>
    <dbReference type="SMR" id="V7BXR3"/>
    <dbReference type="STRING" id="3885.V7BXR3"/>
    <dbReference type="Gramene" id="ESW22792">
        <property type="protein sequence ID" value="ESW22792"/>
        <property type="gene ID" value="PHAVU_005G181600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0786">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYDLGAR"/>
    <dbReference type="OrthoDB" id="419183at2759"/>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003862">
        <property type="term" value="F:3-isopropylmalate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:L-leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.718.10:FF:000004">
        <property type="entry name" value="3-isopropylmalate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.718.10">
        <property type="entry name" value="Isopropylmalate Dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01033">
        <property type="entry name" value="LeuB_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004429">
        <property type="entry name" value="Isopropylmalate_DH"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00169">
        <property type="entry name" value="leuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42979">
        <property type="entry name" value="3-ISOPROPYLMALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42979:SF1">
        <property type="entry name" value="3-ISOPROPYLMALATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53659">
        <property type="entry name" value="Isocitrate/Isopropylmalate dehydrogenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="14 15" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="7 15" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isopropylmalate dehydrogenase-like" evidence="16">
        <location>
            <begin position="43"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU004445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW22792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="406" mass="43592" checksum="743B4FE68E7C471E" modified="2014-02-19" version="1">MAASLQLLQFKPLKPSLSFSLRRFTPLSCSGAPPPSKSPRSYTITLLPGDGIGPEVISVAKDVLLLAGSLEGIKYDFRERLIGGAALDATGVPLPDETLSAAKESDAVLLGAVGGYKWDNNEKHLKPETALLGLRKELQVFANLRPASVFPQLVDASTLKREVAEGVDLMVVRELTGGIYFGKPRGFDTNENGEEIGFNTEIYAAHEIDRIAHAAFKIARKRSGKLCSVDKANVLEASMLWRKRVTAIAQEYPDVELSHMYVDNASMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGASGPGLFEPIHGSAPDIAGQDKANPFATVLSAAMLLKYGLEEEKAAQRIENAVLDTLNRGFRTGDIYSTGTKLVGCKQLGEEIMKSVESNVPAGATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYG3</accession>
    <name>V7BYG3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Calcineurin-like phosphoesterase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G085100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYG3"/>
    <dbReference type="SMR" id="V7BYG3"/>
    <dbReference type="STRING" id="3885.V7BYG3"/>
    <dbReference type="Gramene" id="ESW21615">
        <property type="protein sequence ID" value="ESW21615"/>
        <property type="gene ID" value="PHAVU_005G085100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW21616">
        <property type="protein sequence ID" value="ESW21616"/>
        <property type="gene ID" value="PHAVU_005G085100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0374">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEVLWFM"/>
    <dbReference type="OrthoDB" id="5976022at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47680">
        <property type="entry name" value="SHEWANELLA-LIKE PROTEIN PHOSPHATASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47680:SF2">
        <property type="entry name" value="SHEWANELLA-LIKE PROTEIN PHOSPHATASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Calcineurin-like phosphoesterase" evidence="1">
        <location>
            <begin position="55"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="394" mass="43160" checksum="4CE3297C31A713A7" modified="2014-02-19" version="1">MGREEEMSTTSCKDIPNLLSSFVDTFVDFSVSGLFLPPPPPSPPPLPTRLPSPPRLVAVGDLHGDLEKSKQALRLAGLIDAHDRYIGGSATVVQVGDVLDRGGEELKILYFLEKLKREAARSGGRIVTMHGNHEIMNVEGDFRFATESGVEEFRVWWEWFRAGNKIKSLCQGLEKPKDPMKGVPSSFRGVRKEFHDGFRARVAALRPNGPIATRFLSENVTVLVVGDSIFVHGGLLPEHSSYGLEKINEEVRDWVKGLTGQLSPEYCRSADGLLWLRKFSRSKVPQCDCSALEHVLATVPGVKRMVMGHSIQRVGINGACDDKAIRIDVGLSKGCGDGLPEVLEISRNFGLRILTEDPLYQNKGNATMVDVGKEQGLGLLLGQQGGPKQVEVQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C134</accession>
    <name>V7C134_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sugar phosphate transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G0113001g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C134"/>
    <dbReference type="Gramene" id="ESW23005">
        <property type="protein sequence ID" value="ESW23005"/>
        <property type="gene ID" value="PHAVU_004G0113001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1441">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ITELNFX"/>
    <dbReference type="OrthoDB" id="6418713at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037185">
        <property type="entry name" value="EmrE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004853">
        <property type="entry name" value="Sugar_P_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050186">
        <property type="entry name" value="TPT_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11132">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03151">
        <property type="entry name" value="TPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103481">
        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="116"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="217"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar phosphate transporter" evidence="7">
        <location>
            <begin position="90"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="28491" checksum="438F6920A0E0BE9A" modified="2014-02-19" version="1" fragment="single">MQSLLSLSHSPSTPHVPNFTPRPKFPPPPQLHPFNAFSLPPSSPLLLTATKSSPFLTSSPKVASFRLLAASITDARSEEPAKASGLVKTLQLGAMLAFWYILNIYFNIYNKQVLKVYPFPATVTAFQFGFVSLVINLIWTFNLHPRPSISGSQLAALLPLAMAHTLGNVLTNISLCKVTVSFTHTIKAMEPFFTVLLSALFLGQMPTFWVFSSLLPIVGGVALASMTEVSFNWIGFATAMAANITNQSRNVLSKKMMTSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C172</accession>
    <name>V7C172_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G0878001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C172"/>
    <dbReference type="Gramene" id="ESW23922">
        <property type="protein sequence ID" value="ESW23922"/>
        <property type="gene ID" value="PHAVU_004G0878001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="26" mass="2557" checksum="D96C901647CF1AD1" modified="2014-02-19" version="1" fragment="single">SSSTVSSSISRLYSGANTSSPSGSYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2V0</accession>
    <name>V7C2V0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">DEAD-box ATP-dependent RNA helicase 41</fullName>
            <ecNumber evidence="2">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_004G067700g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DEAD box helicase family. DDX59 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2V0"/>
    <dbReference type="SMR" id="V7C2V0"/>
    <dbReference type="STRING" id="3885.V7C2V0"/>
    <dbReference type="Gramene" id="ESW23683">
        <property type="protein sequence ID" value="ESW23683"/>
        <property type="gene ID" value="PHAVU_004G067700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="360161at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd23022">
        <property type="entry name" value="zf-HIT_DDX59"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.60.220:FF:000002">
        <property type="entry name" value="DEAD-box ATP-dependent RNA helicase 41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007529">
        <property type="entry name" value="Znf_HIT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04438">
        <property type="entry name" value="zf-HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0347">Helicase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="17">
        <location>
            <begin position="135"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="15">
        <location>
            <begin position="166"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="16">
        <location>
            <begin position="352"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="13">
        <location>
            <begin position="135"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00068841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW23683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="58343" checksum="939E6607CDE17382" modified="2014-02-19" version="1">MTDSHPNHNDPSLATEADAPEDAGEGEDVKLRSRDQRLALQGEPKCVICGRYGEYICDETDDDVCSLECKQALLCRIAKSLAPFGSLLPPEKIPIADECFYVSDADNKSGTAPMASDLRTKLDIHVKGDVVAPVLSFSACNLPDKLLHNIEAAGYYMPTPVQMQAIPAALTGKNVLVLANTGSGKSASFLIPIVSRCVIHRRQYVSEKKPLVMVLTPTRELCIQVEEHAKMLGKGLPFKTALVVGGEAMAGQLYRIQQGVELIVGTPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMKIYRALSQPQVLMYSATMSNDLEKMINTLAKGTVVISVGEPNRANKAVKQLAIWVESKQKKQKLFDILATKKHFKPPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSMKERREIMQSFCMGEVPVVVATGVLGRGIDLLGVRQVIVFDMPNSIKEYVHQIGRASRMGEEGEGIVFVNEENKNVFADLIDVLKSGGAAVPRELANSRYTTGFFSGGKASKKRKNTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3T1</accession>
    <name>V7C3T1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">NADH:quinone oxidoreductase/Mrp antiporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G089500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the complex I subunit 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3T1"/>
    <dbReference type="SMR" id="V7C3T1"/>
    <dbReference type="STRING" id="3885.V7C3T1"/>
    <dbReference type="Gramene" id="ESW23945">
        <property type="protein sequence ID" value="ESW23945"/>
        <property type="gene ID" value="PHAVU_004G089500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4668">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNIVAFT"/>
    <dbReference type="OrthoDB" id="543408at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003954">
        <property type="term" value="F:NADH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003945">
        <property type="entry name" value="NU5C-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42829">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42829:SF2">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01434">
        <property type="entry name" value="NADHDHGNASE5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755336" description="NADH:quinone oxidoreductase/Mrp antiporter transmembrane domain-containing protein" evidence="10">
        <location>
            <begin position="20"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="NADH:quinone oxidoreductase/Mrp antiporter transmembrane" evidence="11">
        <location>
            <begin position="7"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="17033" checksum="4670FFB0FF0E8A7E" modified="2014-02-19" version="1">MNLFFVSLFALLQLCGLVAKSAQFPLHVWLPNAVEGLTPIFALIHAATMVATRIFLVVRLLPLFVVLTKIMNIVAFTGLITVILGATLAISQKDIKKILAYSTMSQLGYMMLALGMGSYQMVVWWVSFLVVEGCLSLLVLQSVDSFHLWLIKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4L8</accession>
    <name>V7C4L8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_004G081300g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="10">Part of the t-SNARE complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the syntaxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4L8"/>
    <dbReference type="SMR" id="V7C4L8"/>
    <dbReference type="STRING" id="3885.V7C4L8"/>
    <dbReference type="Gramene" id="ESW23851">
        <property type="protein sequence ID" value="ESW23851"/>
        <property type="gene ID" value="PHAVU_004G081300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0810">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWICFIL"/>
    <dbReference type="OrthoDB" id="10255013at2759"/>
    <dbReference type="PhylomeDB" id="V7C4L8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031201">
        <property type="term" value="C:SNARE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005484">
        <property type="term" value="F:SNAP receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000149">
        <property type="term" value="F:SNARE binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048278">
        <property type="term" value="P:vesicle docking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006906">
        <property type="term" value="P:vesicle fusion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd15848">
        <property type="entry name" value="SNARE_syntaxin1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00179">
        <property type="entry name" value="SynN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000008">
        <property type="entry name" value="Syntaxin 132"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.70:FF:000013">
        <property type="entry name" value="Syntaxin 132"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045242">
        <property type="entry name" value="Syntaxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006012">
        <property type="entry name" value="Syntaxin/epimorphin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006011">
        <property type="entry name" value="Syntaxin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957:SF307">
        <property type="entry name" value="PROTEIN SSO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19957">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05739">
        <property type="entry name" value="SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00804">
        <property type="entry name" value="Syntaxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00503">
        <property type="entry name" value="SynN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00914">
        <property type="entry name" value="SYNTAXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0007">Acetylation</keyword>
    <keyword evidence="8 12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="278"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="14">
        <location>
            <begin position="206"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="36"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00061857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW23851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="307" mass="34749" checksum="EFCB07863D6FCC25" modified="2014-02-19" version="1">MNDLLTESFEIPRGVGHGGGDIELGEYARNSGELGLESFFRKVQELDKQYAKLDKLLKKLQDAHEEAKAVTKAPSMKALKQKMEKDVDEVKKTAYYIKTRIEELDKENLANRQKSGCGKGSGVDRSRTATTISLKKKLKDKMAEFQTLREVIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQEQGRGQIMDALAEIQERHEAVRDVEKKLLELQQIFLDIAVLVDAQGDMLDNIETQVSSAVDHVQQGNNALISAKKHQKNSRKWMCVAILILLIFIIIIVITVIKPWASKNGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5L8</accession>
    <name>V7C5L8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">alpha-D-xyloside xylohydrolase</fullName>
            <ecNumber evidence="8">3.2.1.177</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_003G035400g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>Hydrolysis of terminal, non-reducing alpha-D-xylose residues with release of alpha-D-xylose.</text>
            <dbReference type="EC" id="3.2.1.177"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the glycosyl hydrolase 31 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.177" evidence="8"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5L8"/>
    <dbReference type="SMR" id="V7C5L8"/>
    <dbReference type="STRING" id="3885.V7C5L8"/>
    <dbReference type="Gramene" id="ESW25434">
        <property type="protein sequence ID" value="ESW25434"/>
        <property type="gene ID" value="PHAVU_003G035400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1065">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MVGADAC"/>
    <dbReference type="OrthoDB" id="5839090at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061634">
        <property type="term" value="F:alpha-D-xyloside xylohydrolase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06602">
        <property type="entry name" value="GH31_MGAM_SI_GAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14752">
        <property type="entry name" value="GH31_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1180:FF:000044">
        <property type="entry name" value="Alpha-glucosidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1760:FF:000006">
        <property type="entry name" value="Alpha-glucosidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000016">
        <property type="entry name" value="Maltase-glucoamylase, intestinal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1760">
        <property type="entry name" value="glycosyl hydrolase (family 31)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="entry name" value="Golgi alpha-mannosidase II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030458">
        <property type="entry name" value="Glyco_hydro_31_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048395">
        <property type="entry name" value="Glyco_hydro_31_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025887">
        <property type="entry name" value="Glyco_hydro_31_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000322">
        <property type="entry name" value="Glyco_hydro_31_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22762">
        <property type="entry name" value="ALPHA-GLUCOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22762:SF164">
        <property type="entry name" value="ALPHA-GLUCOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13802">
        <property type="entry name" value="Gal_mutarotas_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01055">
        <property type="entry name" value="Glyco_hydro_31_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21365">
        <property type="entry name" value="Glyco_hydro_31_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="Galactose mutarotase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51011">
        <property type="entry name" value="Glycosyl hydrolase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00129">
        <property type="entry name" value="GLYCOSYL_HYDROL_F31_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755768" description="alpha-D-xyloside xylohydrolase" evidence="10">
        <location>
            <begin position="29"/>
            <end position="925"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 31 N-terminal" evidence="12">
        <location>
            <begin position="82"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 31 TIM barrel" evidence="11">
        <location>
            <begin position="297"/>
            <end position="669"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl hydrolase family 31 C-terminal" evidence="13">
        <location>
            <begin position="677"/>
            <end position="766"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00052064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00066962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF13802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF21365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW25434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="925" mass="102562" checksum="E2C8B2FF2FEA0763" modified="2014-02-19" version="1">MVSSNHLAAISLSSLLLVLLLCSAGASSSSKNATKIGQGYRLVSIEETPDGGLVGILQVKEKTKTYGSDIPLLRFYVKHETDNRLRVHITDAQKQRWEVPYNLLPREQPPPLTQSIGKFRKNPITVSEYSGSEFLFSYTSDPFSFVVKRKSNGETLFDTSSSDSDPFSSLVFKDQYLEISTKLPKSASLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPVYMDLRNAGGKASAHGVLLLNSNGMDVFYTGTSLTYKIIGGVFDFYFFSGPSPLNVVDQYTTLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYKKAQIPLDVIWNDDDHMDGKKDFTLNPANYPRPKLLNFLDKIHKIGMKYVVIIDPGIAVNTSYGVYQRGLANDVFIKYDGEPFLAQVWPGAVNFPDFLNPKTVSWWVDEIRRFHELVPVDGLWIDMNEVSNFCSGKCKIPKGKCPTGTGPGWICCLECKNITSTRWDDPPYKINASGIKAPIGYKTIATSAYHYNGVLEYDAHSLYGFAQSAATHKGLQGLQGKRPFILSRSTYVGSGKYAAHWTGDNQGTWENLKYSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWQSVAESARNALGIRYKLLPFLYTLNYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLGTSLMVSPVLEQGKTQVKALFAPGSWYSLLDWTQTITSKDGVYVTLDAPLHVVNVHLYQNTILPMQQGGLVSKEARMTPFTLIVTFPSGAAEGEAKGNLFLDNDELPDMNLGNGYSTYVDLYATVKQGAVKVWSDVQEGKFALDKGLIIDAISVLGLDGTGAVSSFEIDGKPLTGVPSVNISTSQHEHLNSEGEGEKKTVMVALKGLNIPVGKNFAMTWKMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6E7</accession>
    <name>V7C6E7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G060900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6E7"/>
    <dbReference type="SMR" id="V7C6E7"/>
    <dbReference type="Gramene" id="ESW25732">
        <property type="protein sequence ID" value="ESW25732"/>
        <property type="gene ID" value="PHAVU_003G060900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S78J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1906668at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33429:SF7">
        <property type="entry name" value="OS02G0708000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33429">
        <property type="entry name" value="OS02G0708000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="59"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW25732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="172" mass="19442" checksum="DF7216DA04B279C3" modified="2014-02-19" version="1">MSLQGQPQQPVQVYPTNQPPSSHHSKGSFGAVFIVLGIILVISVVACFLGRLCNKRYNSHSSSQRPPKQQRPQIHDLRPRDEGDIEFGVDKRMPPPIIRTKGQGHGHGHGHGAGTAPQRHVNDNMKEFEMRPGHGEDLRAESQAYENSMNFTHTTWFSKSKNTMRRVVMQKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAK0</accession>
    <name>V7CAK0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Hexosyltransferase</fullName>
            <ecNumber evidence="13">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G079100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 13">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Golgi apparatus membrane</location>
            <topology evidence="2 13">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the glycosyltransferase 31 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="13"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAK0"/>
    <dbReference type="SMR" id="V7CAK0"/>
    <dbReference type="STRING" id="3885.V7CAK0"/>
    <dbReference type="Gramene" id="ESW25946">
        <property type="protein sequence ID" value="ESW25946"/>
        <property type="gene ID" value="PHAVU_003G079100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2288">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IWSMPEY"/>
    <dbReference type="OrthoDB" id="1158011at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008378">
        <property type="term" value="F:galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000002">
        <property type="entry name" value="Hexosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025298">
        <property type="entry name" value="DUF4094"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002659">
        <property type="entry name" value="Glyco_trans_31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214:SF343">
        <property type="entry name" value="BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13334">
        <property type="entry name" value="DUF4094"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01762">
        <property type="entry name" value="Galactosyl_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10 13" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="12 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 13" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4094" evidence="14">
        <location>
            <begin position="20"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU363063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF13334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="380" mass="43010" checksum="F01D2F98C574F639" modified="2014-02-19" version="1">MSMKSKGGAAELSARNVLQRKWALLLCVASFCAGMFFTNRIWSMPEYIEISGTSEIERIKLNSDGCNLNPVARPSSNYSKVEVSNTQNVVKNDVKRPRKSETIESSTRRKYFMVIGINTAFSSRKRRDSVRTTWMPRANERQKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEEKLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGLTLSMHRMKPRVYVGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISKDLATYISINQDVLHKYANEDVSLGSWFIGLDVDHVDDRRMCCGTPPDCEWKAQAGNVCVASFDWKCSGICRSVERMKEVHLRCGEDENALWSAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAP0</accession>
    <name>V7CAP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G186100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAP0"/>
    <dbReference type="STRING" id="3885.V7CAP0"/>
    <dbReference type="Gramene" id="ESW27247">
        <property type="protein sequence ID" value="ESW27247"/>
        <property type="gene ID" value="PHAVU_003G186100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QDSWTNA"/>
    <dbReference type="OrthoDB" id="9451254at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46869">
        <property type="entry name" value="C2H2-LIKE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46869:SF6">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="11"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="97"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="387"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="3">
        <location>
            <begin position="476"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="141"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="154"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW27247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="563" mass="62225" checksum="6EEB178E556D9F53" modified="2014-02-19" version="1">MEGDRIQELKHACKFCGKCFPCGRSLGGHMRSHITNLSSEEKEKLPSRKLFSSSLNNDGDKDSEAAATNAAYGLRENPKKTWRISDHSSEDALVFDKFCKECGKAFHSWKALFGHMKCHSEKERLSNSLEDQDSWTNAKVVMDSQSDNEATAPNKRRRSKRRTRYTVASAAATSSVVSFANPSSSLSEVEQEQEEVAMSLMMLSRDVSPWSGPHSVAESSDNNSAYFEARSSVRTNLVAKFDGNSNFTPNTARMIKQSDNKWEVGNSENPNSIRGKSSQRLTTTAATVEIAENGFRVNKSGVSSIGYEKVNKSELQYVSALGDSEGEHGRSRVNGPESILSKSTTTGNKYYSIKTKFLGSELKSNKNWVDKASEAESSKNSNKRGKFECTTCNKTFHSYQALGGHRASHKKIKGCFASRNESSENSIETDLPPDPITTENKLMSNTDREYLGESQHGAGFHDEVETVTESKKSKGHECPICLKVFPSGQALGGHKRSHMTGGSESRNFQTVVLQEPVAEIRDFLDLNLPAATEEESNSHADSNRPWWVVEGNHKQEALVGLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD45</accession>
    <name>V7CD45_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_003G188000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD45"/>
    <dbReference type="SMR" id="V7CD45"/>
    <dbReference type="Gramene" id="ESW27278">
        <property type="protein sequence ID" value="ESW27278"/>
        <property type="gene ID" value="PHAVU_003G188000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQEESTY"/>
    <dbReference type="OrthoDB" id="264917at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000005">
        <property type="entry name" value="Putative receptor-like protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000252">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000001">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000039">
        <property type="entry name" value="receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631:SF207">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE MEE39-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45631">
        <property type="entry name" value="OS07G0107800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 14" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756039" description="Protein kinase domain-containing protein" evidence="14">
        <location>
            <begin position="29"/>
            <end position="822"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="426"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="512"/>
            <end position="782"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="540"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW27278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="822" mass="92051" checksum="861AB613B6837C03" modified="2014-02-19" version="1">MGLDNKGIRLIFIFVLHPFLFTLPKCNSSFTPLVNYLLDCGSSHPTQLTDGRTFKSDRETTSLLATAEDVQISLDSNLSSSVPSSLLPLYQTARLFQEESTYSFYISKTGRLWVRLYFFPLSNPSYNLTAAVFSVQTNHHVLLHEFSVRNSDSPVFKEYLVNVSDSRFSLKFKPMKNSFAFINAIEVVSAPDNLISDSAIALSPLREFKGLLLSAFEVSYRINVGGPTITPGDDALARTWETDGSYNIFPQGSETLSVSKKSIKYPHTGVTPLIAPNLVYASVVHMKDAKVMRPNFNLSWMVNVERSYSYLIRMHFCDILSKSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDFVLNALNITNGSILVQVGPTNLQQGTVDAILNGIEVMKISNIADSLDGFFSVDGKYKGPSSITTEMKILVYVGLVLAVTAMLLLVMICMRWKKRPQGWEKHSRFSSWLLPVHSPRLCSSKSSWRGSTASSSHKSTKHGKRFFPFSEMREATNNFDETRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFDLPCLSWKKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKAVPEKAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGVLNEEIDPHIAATMNLQSQSVFVQISERCLADCGVDRPSMGDVLWHLEYALRLEEAASRIDEPEDKSTSIVTNEDNSVLFSEIDNLEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDS1</accession>
    <name>V7CDS1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G202100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDS1"/>
    <dbReference type="SMR" id="V7CDS1"/>
    <dbReference type="STRING" id="3885.V7CDS1"/>
    <dbReference type="Gramene" id="ESW27440">
        <property type="protein sequence ID" value="ESW27440"/>
        <property type="gene ID" value="PHAVU_003G202100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV35">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WMCHFFL"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033612">
        <property type="term" value="F:receptor serine/threonine kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000683">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000725">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000771">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000721">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025875">
        <property type="entry name" value="Leu-rich_rpt_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050647">
        <property type="entry name" value="Plant_LRR-RLKs"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056:SF57">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING N-TERMINAL PLANT-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48056">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12799">
        <property type="entry name" value="LRR_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10" id="KW-0732">Signal</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756076" evidence="10">
        <location>
            <begin position="26"/>
            <end position="960"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="873"/>
            <end position="896"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="11">
        <location>
            <begin position="29"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="12">
        <location>
            <begin position="99"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="12">
        <location>
            <begin position="355"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW27440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="960" mass="104665" checksum="FD658A8F0BF87BBA" modified="2014-02-19" version="1">MGSIWMCHFFLLLSILNTSFISIMANNATDSYWLLRIKSELVDPLGALGNWSPSTHVCNWNGITCAADQEHIIGLNLSSSGISGSISVEFGHLASIQTLDLSSNSLSGSIPSELGELQNLRILQLYSNDISGNIPAEIGNMRKLQILRIGDNMLTGEIPPSIANMSELTVLAIGYCHLNGSIPVGIGKLKHLISLDLQMNSLGGPIPEEIQGCEELQNFAASNNMFEGDIPFSMGSLKSLKILNLANNSLSGSIPPALSHLSNLTYLNLLGNKLHGEIPSVLNSLIQLQKLDLSKNNLSGSIPLLNVKLQSLEALVLSDNALTGSIPNNFCLRGSKLQQLFLARNMLSGKFPLELLNCPSIQQLDLSDNSFEGELPASLDKLNSLTYLVLNNNSFVGSLPPEIGNISSLEGLFLFGNFLTGKIPMEIGRLQRLSTIYLYDNQMSGLIPREITNCTSLEEIDFFGNHFTGPIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNMLSGSIPPTFSYLSELTKITLYNNSFEGPLPHSLSSLKSLKIINFSNNKFSGSFFPLTGSNSLTILDLTNNSFSGPIPSTLANSRNLSRLRLGKNYLTGSIPSEFHQLTELNFLDLSFNNLTGEMPPQLLNSKKIEHILMSNNRLSGKLPVWLGSLQELGELDLSYNSFSGRVPSELGNCSKLLKLSLHHNNLSGEIPQELGNLTALNVFNLQRNGFSGPIPPTIQQCTKLYELRLSENFLTGTIPVELGGLAELQVILDLSKNLFTGEIPPSLGNLMKLERLNLSFNQLKGNVPPSLGKLTSLHVLNLSNNHLEGQIPPTFSGFPLSSFLNNHGLCGPPLRSCSESTALGEMQLSNKQVAAIIVAIVFTSTVICLVMLYIMLRIWCNWRKVAISSAEGGTVAHKARNGEYWNMNSFGLIPSPDKQNSATTTSFYNLKMETMENTHM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFB0</accession>
    <name>V7CFB0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">LIM zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G024900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFB0"/>
    <dbReference type="STRING" id="3885.V7CFB0"/>
    <dbReference type="Gramene" id="ESW28870">
        <property type="protein sequence ID" value="ESW28870"/>
        <property type="gene ID" value="PHAVU_002G024900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28871">
        <property type="protein sequence ID" value="ESW28871"/>
        <property type="gene ID" value="PHAVU_002G024900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28872">
        <property type="protein sequence ID" value="ESW28872"/>
        <property type="gene ID" value="PHAVU_002G024900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28873">
        <property type="protein sequence ID" value="ESW28873"/>
        <property type="gene ID" value="PHAVU_002G024900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28874">
        <property type="protein sequence ID" value="ESW28874"/>
        <property type="gene ID" value="PHAVU_002G024900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1703">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEATHAF"/>
    <dbReference type="OrthoDB" id="25414at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140096">
        <property type="term" value="F:catalytic activity, acting on a protein"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032875">
        <property type="term" value="P:regulation of DNA endoreduplication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd09396">
        <property type="entry name" value="LIM_DA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd22249">
        <property type="entry name" value="UDM1_RNF168_RNF169-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.110.10:FF:000078">
        <property type="entry name" value="Protein DA1-related 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045218">
        <property type="entry name" value="DA1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022087">
        <property type="entry name" value="DA1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003903">
        <property type="entry name" value="UIM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24209:SF25">
        <property type="entry name" value="PROTEIN DA1-RELATED 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24209">
        <property type="entry name" value="PROTEIN DA1-RELATED 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12315">
        <property type="entry name" value="DA1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23625">
        <property type="entry name" value="UIM_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00726">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50330">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 6" id="KW-0440">LIM domain</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0832">Ubl conjugation</keyword>
    <keyword evidence="3 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="9">
        <location>
            <begin position="187"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="478"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="99"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="481"/>
            <end position="499"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW28872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="558" mass="63696" checksum="48B29401D0049CA8" modified="2014-02-19" version="1">MGWFRKLLKGSDHISRGQYQGKYGEDRIWDNHRSSMDDLTDIEKEDIDRAIALSLSEEDHLKGKKVVEDDSQSEDDELCKIDDEEDEYLAKIQQEDEYLAKIQQQEDERLAKVQQEEDEHIAKIQREDERLAKIQQDEVERLAKAQLEEDEQLARAIQESLTLGSPPQSDNDSSFLSYPHLFPPGHRICAGCKTEIGQGRFLSCMGGVWHPECFCCHSCRLPITDYEFSMSSNRPYHKSCYREKHHPRCDVCKNFIPTNSSGLIEYRAHPFWLQKYCPSHELDGTPRCCSCERMEPRDAKYLLLDDGRKLCLECLDSSIMDTHECQPLYLEIQEFYEGLNMKLEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTISRRPKIGAGYQVIDMITEPYKLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRFKGYPNLSPEVEEGICQVLAHMWLDSELYTGSGNGGASSSSSSSSSSPSSSSASSKKGKRSDFEKKLGEFFKHQIESDTSSAYGDGFRSGNQAMLKYGLKSTLDHIHMTGSFPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFL6</accession>
    <name>V7CFL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AT4G36440-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G257300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFL6"/>
    <dbReference type="STRING" id="3885.V7CFL6"/>
    <dbReference type="Gramene" id="ESW28080">
        <property type="protein sequence ID" value="ESW28080"/>
        <property type="gene ID" value="PHAVU_003G257300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS4W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNCEQSY"/>
    <dbReference type="OrthoDB" id="1848995at2759"/>
    <dbReference type="PhylomeDB" id="V7CFL6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35752">
        <property type="entry name" value="G-PROTEIN COUPLED RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35752:SF1">
        <property type="entry name" value="G-PROTEIN COUPLED RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757740" description="AT4G36440-like protein" evidence="3">
        <location>
            <begin position="34"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="308"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="375"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="402" mass="44307" checksum="7F15A010728C4EF6" modified="2014-02-19" version="1">MRCSMAFAGLCLGVLLQIPWMASVSMPTSNCYAFDNSSRIFDFSGWSGYLFEYDQKQGSDLAVRFCKDVESRSQTGYVDFGRFDRFNYFVAGSGQSDFIQEFYSGDLMGCEQSYDKMGRTAQVNIVCGSCLNGQCKGRPGCICNVTYESNCRVLVDLAIPCDKPGPQVFQGFTVGFHPRSWELVYNGLTQIGFEKVHHDFRFHTGQTQIVLFMTAVASLSSLVQKPSLKVNPDKGLEIKLSGSADKGKPPTTLSPSMLIVDWRCEVARDTPYEVNITIPVEGYQPIQFVLTKTCDYTQDPGGGRTRGWAIFGVLSCIFFVSSTLFCCGGFIYKTKVGRQRGIDALPGMTILSACLETVSGVGHSYSRPEEVNSAFGSEASWERSPGPSQGAWKPSERKYGAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGY2</accession>
    <name>V7CGY2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G066600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGY2"/>
    <dbReference type="Gramene" id="ESW29389">
        <property type="protein sequence ID" value="ESW29389"/>
        <property type="gene ID" value="PHAVU_002G066600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1725351at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="73" mass="8751" checksum="A7B96DECE6BB2D3E" modified="2014-02-19" version="1">MEHCNEEAFVNLVEDDKVSVGVCKRGSIVGYGYNNEVIMRKYLCSKARLRYKKHLMREDRKRYHRPLTRTKCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHK3</accession>
    <name>V7CHK3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G0222001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHK3"/>
    <dbReference type="STRING" id="3885.V7CHK3"/>
    <dbReference type="Gramene" id="ESW28838">
        <property type="protein sequence ID" value="ESW28838"/>
        <property type="gene ID" value="PHAVU_002G0222001g"/>
    </dbReference>
    <dbReference type="OMA" id="YGDEELM"/>
    <dbReference type="OrthoDB" id="408373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080030">
        <property type="term" value="F:methyl indole-3-acetate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080032">
        <property type="term" value="F:methyl jasmonate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080031">
        <property type="term" value="F:methyl salicylate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009694">
        <property type="term" value="P:jasmonic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009696">
        <property type="term" value="P:salicylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045889">
        <property type="entry name" value="MES/HNL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992:SF1066">
        <property type="entry name" value="METHYL JASMONATE ESTERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10992">
        <property type="entry name" value="METHYLESTERASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW28838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="95" mass="10904" checksum="DEC6A2BDFA67E49A" modified="2014-02-19" version="1" fragment="single">DLTLALSLLRPSRIFGDEQMSGENARLTEENYGSVPRVYIMCEQDNLLNREVQLSMTQRNPPNDVKLIAGADHMPMFSKPQDFCSYLQEIANTYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJZ6</accession>
    <name>V7CJZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_002G087800g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="16">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJZ6"/>
    <dbReference type="SMR" id="V7CJZ6"/>
    <dbReference type="STRING" id="3885.V7CJZ6"/>
    <dbReference type="Gramene" id="ESW29653">
        <property type="protein sequence ID" value="ESW29653"/>
        <property type="gene ID" value="PHAVU_002G087800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGESDHE"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="PhylomeDB" id="V7CJZ6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000004">
        <property type="entry name" value="Calcium-dependent protein kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000067">
        <property type="entry name" value="calcium-dependent protein kinase 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000050">
        <property type="entry name" value="Calcium-dependent protein kinase 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0106">Calcium</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="15" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0519">Myristate</keyword>
    <keyword evidence="10 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="21">
        <location>
            <begin position="68"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="22">
        <location>
            <begin position="369"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="22">
        <location>
            <begin position="405"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="22">
        <location>
            <begin position="441"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="22">
        <location>
            <begin position="477"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="20">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="20">
        <location>
            <begin position="11"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="20">
        <location>
            <begin position="25"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00024334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW29653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="550" mass="61993" checksum="FF64E1EC82C53195" modified="2014-02-19" version="1">MGNCNACAKADVVEDNSKSSDGNRARKKEANHKKPNPFSEEPGRLAAPIRVLKDVIPMSHRTRISDTYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNIVRLKATFEDNENVHLVMELCEGGELFDRIVARGHYSERAAAAVARTIAEVVKMCHSNGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGEKFAEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISESAKSLVRRMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTFEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIESGELQEALADESGETDADVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGITGQAVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKC5</accession>
    <name>V7CKC5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G0638000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKC5"/>
    <dbReference type="STRING" id="3885.V7CKC5"/>
    <dbReference type="Gramene" id="ESW29356">
        <property type="protein sequence ID" value="ESW29356"/>
        <property type="gene ID" value="PHAVU_002G0638000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1540">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIFRSRC"/>
    <dbReference type="OrthoDB" id="6329284at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01209">
        <property type="entry name" value="Ubie_methyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="63" mass="7252" checksum="933BB81052F201A2" modified="2014-02-19" version="1" fragment="single">MAMFVPSFSIFRPTLIQCTNDRQALFNRIAPVYDNLLHSLNDLLSIGQHRVWKRMAVSWTGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL99</accession>
    <name>V7CL99_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">gibberellin 2beta-dioxygenase</fullName>
            <ecNumber evidence="11">1.14.11.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G193300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>gibberellin A1 + 2-oxoglutarate + O2 = gibberellin A8 + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:15005"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:58524"/>
            <dbReference type="ChEBI" id="CHEBI:58594"/>
            <dbReference type="EC" id="1.14.11.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Hormone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Plant hormone biosynthesis; gibberellin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.13" evidence="11"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL99"/>
    <dbReference type="SMR" id="V7CL99"/>
    <dbReference type="STRING" id="3885.V7CL99"/>
    <dbReference type="Gramene" id="ESW30919">
        <property type="protein sequence ID" value="ESW30919"/>
        <property type="gene ID" value="PHAVU_002G193300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIMVKAC"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045543">
        <property type="term" value="F:gibberellin 2-beta-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.330:FF:000014">
        <property type="entry name" value="Gibberellin 2-beta-dioxygenase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00682">
        <property type="entry name" value="IPNSYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6 12" id="KW-0408">Iron</keyword>
    <keyword evidence="3 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="13">
        <location>
            <begin position="176"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00052204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00055835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00061282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00066708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW30919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="38431" checksum="0B8C3D9ECB38199E" modified="2014-02-19" version="1">MVVLSNQSALNELFLAKTCNPPTMFTEVPVVDLSRPDAKTIMVKACQEIGLFKVVNHGIPLEVITRLENEALKFFMQSQSHKDKAGPPDPFGYGSKRIGTNGDLGWVEYLLLSTNPDIVSPKTLQLFHQNPQVFRLCVEEYIGAVKKMCCEVLEEMGEGLGMGERNVFSRMIREERSDSCLRVNRYPACPELKEEGALSGRNLIGFGEHTDPQILSVLRSNNTSGLQICLPDGTWVSIPPDPSSFFVNVGDLLQVMTNGRFRSVKHRVLADSSLSRLSMIYFGGPCLDEKIGPLPSLVSREEENLYRELTWREYKNAAYKTRLSDDRITLFQKSADHTHKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMW6</accession>
    <name>V7CMW6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G166700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SHI protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMW6"/>
    <dbReference type="STRING" id="3885.V7CMW6"/>
    <dbReference type="Gramene" id="ESW30600">
        <property type="protein sequence ID" value="ESW30600"/>
        <property type="gene ID" value="PHAVU_002G166700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ15">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPAPINT"/>
    <dbReference type="OrthoDB" id="692274at2759"/>
    <dbReference type="PhylomeDB" id="V7CMW6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009851">
        <property type="term" value="P:auxin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007818">
        <property type="entry name" value="SHI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006511">
        <property type="entry name" value="SHI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006510">
        <property type="entry name" value="Znf_LRP1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01624">
        <property type="entry name" value="LRP1_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01623">
        <property type="entry name" value="put_zinc_LRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31604">
        <property type="entry name" value="PROTEIN LATERAL ROOT PRIMORDIUM 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31604:SF33">
        <property type="entry name" value="TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05142">
        <property type="entry name" value="DUF702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0010">Activator</keyword>
    <keyword evidence="6" id="KW-0073">Auxin biosynthesis</keyword>
    <keyword evidence="10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="3" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="81"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="164"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="11">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="175"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="320" mass="34755" checksum="13DDE7955FA2EB45" modified="2014-02-19" version="1">MAGIFSLGGRGNNNEEEIPPPPDTLYWYNNKNDDVSSYHHHRGGGGFELWNQQQQQHFMDQGPPQPRPLFHQDLYSALGVGVGPSRPISDDQSSSRSGFMVGGGSGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQLSTLQQNIESSGELPKRQRERDHNNPTSSSLACTRLPSNPSSSGLEEVNFPAVVRSSAEFRCVRVSSMDEADEEYAYSTAVNIGGHVFKGILYDYGPEGNRNYMGGNGESSSTGVGGLNLTTGAVVSEPLLDPSSSLYPAPLNTFMPGSGTQFFPHPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPF8</accession>
    <name>V7CPF8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA-binding S4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G286700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPF8"/>
    <dbReference type="SMR" id="V7CPF8"/>
    <dbReference type="STRING" id="3885.V7CPF8"/>
    <dbReference type="Gramene" id="ESW32024">
        <property type="protein sequence ID" value="ESW32024"/>
        <property type="gene ID" value="PHAVU_002G286700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4837">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKWEVAH"/>
    <dbReference type="OrthoDB" id="4150at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="entry name" value="RNA-binding S4 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017506">
        <property type="entry name" value="PSII_S4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040591">
        <property type="entry name" value="RqcP2_RBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03069">
        <property type="entry name" value="PS_II_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13633">
        <property type="entry name" value="MITOCHONDRIAL TRANSCRIPTION RESCUE FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13633:SF3">
        <property type="entry name" value="MITOCHONDRIAL TRANSCRIPTION RESCUE FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17774">
        <property type="entry name" value="YlmH_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55174">
        <property type="entry name" value="Alpha-L RNA-binding motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50889">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RNA-binding S4" evidence="2">
        <location>
            <begin position="248"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="323" mass="34908" checksum="3A9C46D91A494945" modified="2014-02-19" version="1">MAAATSFGTACILRRAAQAFAISHSHIFNTNATFSFQRKLSSQILSVSTSSASGVSQAVQASNGEVDVLVKGVGERNVTKEVKHILEMARRASLKRETLHTDFLTPPVLKESMLVLEKLADVKAISQGGYPQAERCRISVGHPEELTSDPDVISALSIKGNFQFEPCSHGDFLGSILGTGIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKISRSKLVNMISNGDVRVNWNPVTTKGTTLKSGDIISVSGKGRLKIGEINSTKKGKFAVELIRYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRC1</accession>
    <name>V7CRC1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">U-box domain-containing protein</fullName>
            <ecNumber evidence="7">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G270300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="7"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRC1"/>
    <dbReference type="SMR" id="V7CRC1"/>
    <dbReference type="Gramene" id="ESW31815">
        <property type="protein sequence ID" value="ESW31815"/>
        <property type="gene ID" value="PHAVU_002G270300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTKN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KDDLCIT"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000502">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF20">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="8">
        <location>
            <begin position="9"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW31815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46302" checksum="E38ACE3AB0DC18CA" modified="2014-02-19" version="1">MVRDDLYITVPSFFRCPISLDVMKSPVSLSTGVTYDRSSIQRWLDNGNNTCPATMQVLQTKEFVPNRTLQRLIQIWSDSLHHPLHSPHSPTSTHSLSLPSKNQILLAISDLQTRAQNRIDSLAKIARFAQDSEENRDFLVRTECFVPLLVGFLDNVNGSVEFLEQVVTALDLVIGKMEDREGLKNLILKRQGEGEKQSLDSLFIALQQGSHAAQIASVRVLTSVAVDVESKLLIAEKEGLVSELLKLITPEKDPDLIDNCLSCLVAISSPRRSKMKLVRLGAVKVFSKLLLASNMSVSVTEKVLKLVETVSSTKEGRSEICEDSACVAAIVNKVLKVSSVATEHAVTTLWSVCYLFRDQTAQEAVTNANGLTKILLLMQSNCSPQVRQMSVDLLKIFRVNSKSCLSSYDTKTTHIMPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRH0</accession>
    <name>V7CRH0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GTP-binding protein OBGC2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G010500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRH0"/>
    <dbReference type="SMR" id="V7CRH0"/>
    <dbReference type="STRING" id="3885.V7CRH0"/>
    <dbReference type="Gramene" id="ESW32704">
        <property type="protein sequence ID" value="ESW32704"/>
        <property type="gene ID" value="PHAVU_001G010500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1489">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TNIMRDD"/>
    <dbReference type="OrthoDB" id="347018at2759"/>
    <dbReference type="PhylomeDB" id="V7CRH0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01898">
        <property type="entry name" value="Obg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.210.12">
        <property type="entry name" value="GTP1/OBG domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006074">
        <property type="entry name" value="GTP1-OBG_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006169">
        <property type="entry name" value="GTP1_OBG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036726">
        <property type="entry name" value="GTP1_OBG_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045086">
        <property type="entry name" value="OBG_GTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11702">
        <property type="entry name" value="DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11702:SF39">
        <property type="entry name" value="GTP-BINDING PROTEIN OBGC2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01018">
        <property type="entry name" value="GTP1_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82051">
        <property type="entry name" value="Obg GTP-binding protein N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00905">
        <property type="entry name" value="GTP1_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51883">
        <property type="entry name" value="OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Obg" evidence="5">
        <location>
            <begin position="69"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="OBG-type G" evidence="4">
        <location>
            <begin position="263"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="91"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW32704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="475" mass="51775" checksum="D7D23BA2225F4D89" modified="2014-02-19" version="1">MVSLISPPSSSSNVQLHETRFFSTLFIPPRSVQFLHNTRNHQNHKWKTVRCGVTGAAASPPPSLMKEPHKFFDHVIITVRAGDGGHGAVLNHREKNEQEQGKAKKKGKGSFKRDFDGSLILPSGGHGGDVVIYADEGLDTLLEFHSKSRYQAKRGGNVGAMGVLTSMLRNGLVAPTMRIPVPVGTVVKSKRGKVSADLARPGDEVLVARGGQGGISLLEMPHGQRKKMMAQTTNVMRDDSDKILVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATESPVNDYRTVREELRMYNPAYLERPYVVVLNKIDLPEAKDRLPSLIQEIMRIGNRGAQLSDETDTKEKRLEDYPRPLSVVGVSVLKGVRINEMLKEIRAALKKCKDSSETLVSTSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTZ3</accession>
    <name>V7CTZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Remorin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G022700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the remorin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTZ3"/>
    <dbReference type="SMR" id="V7CTZ3"/>
    <dbReference type="STRING" id="3885.V7CTZ3"/>
    <dbReference type="Gramene" id="ESW32853">
        <property type="protein sequence ID" value="ESW32853"/>
        <property type="gene ID" value="PHAVU_001G022700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUK1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AVINTCH"/>
    <dbReference type="OrthoDB" id="648416at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005516">
        <property type="entry name" value="Remorin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31471">
        <property type="entry name" value="OS02G0116800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31471:SF13">
        <property type="entry name" value="REMORIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03763">
        <property type="entry name" value="Remorin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Remorin C-terminal" evidence="4">
        <location>
            <begin position="499"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="76"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="282"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="420"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="534"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="100"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="120"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="131"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="421"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="613" mass="66335" checksum="6940999AD11D556D" modified="2014-02-19" version="1">MRELGFQERRSWRRAGSRRGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDHDSLASEISLHLAAQEHDGDFAHSESWSGPDPDLDLNNRQQQRRADADLDALHRKHHRNRFSGKGEKAKVQKEEDSDGGDTEDGNQLLEFDSARNSFSLALKECQDRRSRSEALLKKHDRRRPASLDLNNAVGNGNVSSPRLGLGAMKKSTVCSRRSGSGSANFPSPGTPNYLHAGAAMQKGWCSERVPLHTSAARKQVGAALLPFNNGRTLPSKWDDAERWILSPVSGDGTGRASLPAPQRRPKSKSGPLGPPGAAAVAYYSLYSPAVPLFDGGNSGSFMSASPFSAAVSVSAAADGLMASSGGSCGAVPTRTDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNVSPAISRRDMATQMSPEGSSCSSPNLRPSFSASTPPSLPLSEFKSLPFSKMDVRDVPVDERVTMTRWSKKHRALFSGRGSENVDSWKIRETSSRSSSWDITEGSKAVTKAKREEAKINAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRLAQKKAQEMRSSVSTNQDHQVARTPHKAILFSRATQMGSLSGCFTCHAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU75</accession>
    <name>V7CU75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">CWF21 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G088700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CWC21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU75"/>
    <dbReference type="SMR" id="V7CU75"/>
    <dbReference type="STRING" id="3885.V7CU75"/>
    <dbReference type="Gramene" id="ESW33664">
        <property type="protein sequence ID" value="ESW33664"/>
        <property type="gene ID" value="PHAVU_001G088700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1869">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEAPKHR"/>
    <dbReference type="OrthoDB" id="10267305at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd21373">
        <property type="entry name" value="cwf21_SRRM2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051372">
        <property type="entry name" value="CWC21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013170">
        <property type="entry name" value="mRNA_splic_Cwf21_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36562">
        <property type="entry name" value="SERINE/ARGININE REPETITIVE MATRIX 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36562:SF5">
        <property type="entry name" value="SERINE_ARGININE REPETITIVE MATRIX 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08312">
        <property type="entry name" value="cwf21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01115">
        <property type="entry name" value="cwf21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="domain" description="CWF21" evidence="8">
        <location>
            <begin position="58"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="150"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="172"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="239"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="251"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="290"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="309"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="327"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="362"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="392"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="484"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="677"/>
            <end position="719"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="719" mass="84873" checksum="F0D15388924223A0" modified="2014-02-19" version="1">MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVADNTRGFEEDQGTAGLSRKPNKEILEHDRKRQIQLKLVILEDKLIDQGYTDAEISEKLEKARQNLEDASATNESDGLGPVSASNKKVSDTQTHQIAARKEKQMESLKAALGIVSSEVNEINADGTDGLGNDGKNGSNMDGKHISKPEHAFLDRNFSRKKQMVEGQKDENVKSHKKIGTREKKYNDDSSDSDTSSNEKRGTKKRGKKYDESDSDSDSKRKVKAKKMKIPKHHKKGRVEDSDSSYDSDDSNIARKSYKKRQESHYRNTSEDDSDDHDDIPKNKTKEGMKHSKMSKRHDSEVESDVDSKENKYGTAGKQRTRRYNSDDENSDRDGVKHASEQRSRNYYNKDVESQIVGRTARHGEDHLARRHRRDDDNHREHEHKRNNDDRGERKHGRDEDRIERNYTRDEDVGERKHARNENDSKEEKHRRHDDGRRVNRTGRKHSRDEDDLGERKQARDGDDSKEGNRRKDEDDHGERKNLSDVVDLVERKRGRDEDEHGERKFRRDEDEHGERKFRRDEDEHGERKFRRDEDEHGERKFRREEDEHGERKFRRDEDEHGERKFRRDEDDHARRKFRRDDDDYGERKHSRDEGGVHMEAKHSRIEDSRGERKNIREDDDRERKHSKDEGGRGERKHKRDDDDDGHEERKQHRRDDVGRGERKHRREEQERRRDERESRGDYSKRAKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUF3</accession>
    <name>V7CUF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Cytochrome b5 heme-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G036200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the fatty acid desaturase type 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUF3"/>
    <dbReference type="SMR" id="V7CUF3"/>
    <dbReference type="STRING" id="3885.V7CUF3"/>
    <dbReference type="Gramene" id="ESW33013">
        <property type="protein sequence ID" value="ESW33013"/>
        <property type="gene ID" value="PHAVU_001G036200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4232">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QWWKNKH"/>
    <dbReference type="OrthoDB" id="260091at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016717">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03506">
        <property type="entry name" value="Delta6-FADS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.120.10">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001199">
        <property type="entry name" value="Cyt_B5-like_heme/steroid-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036400">
        <property type="entry name" value="Cyt_B5-like_heme/steroid_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005804">
        <property type="entry name" value="FA_desaturase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012171">
        <property type="entry name" value="Fatty_acid_desaturase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19353:SF30">
        <property type="entry name" value="DELTA 8-(E)-SPHINGOLIPID DESATURASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19353">
        <property type="entry name" value="FATTY ACID DESATURASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00173">
        <property type="entry name" value="Cyt-b5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00487">
        <property type="entry name" value="FA_desaturase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015921">
        <property type="entry name" value="FA_sphinglp_des"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00363">
        <property type="entry name" value="CYTOCHROMEB5"/>
    </dbReference>
    <dbReference type="SMART" id="SM01117">
        <property type="entry name" value="Cyt-b5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55856">
        <property type="entry name" value="Cytochrome b5-like heme/steroid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50255">
        <property type="entry name" value="CYTOCHROME_B5_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="251"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="285"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome b5 heme-binding" evidence="13">
        <location>
            <begin position="5"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW33013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="447" mass="50780" checksum="438F81C81986DC4A" modified="2014-02-19" version="1">MDPPAPYISSSDLRTHNKPHDAWISIHGKIYDVSSWLHRHPGGTLPLLTVAGTDATDAFLAFHPPSAAALLPTFATGVLLSDYAVSPASSDYRQLLSKLSDLKLFERKGHTTLILLSIILTLLPLCVCGVVFSDSTCVHLLSAALIGILWIQSGWIGHDSGHYNVMLNRRFNRVAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFNSLTSRFYDRKLIFDSLARFLVSYQHWTYYPVMCFARINLFAQSFFLLFSKRKVEHRGVELLGLLAFWVWYPLLVSFLPNWWERILFVVTSFSVTGIQHVQFCLNHFSSKVYLGPPSGDDWFEKQTNGTLDVSCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRKAALQARDGSGPVPKNLVWEAVNTHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW71</accession>
    <name>V7CW71_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G146700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Preautophagosomal structure</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW71"/>
    <dbReference type="SMR" id="V7CW71"/>
    <dbReference type="Gramene" id="ESW34369">
        <property type="protein sequence ID" value="ESW34369"/>
        <property type="gene ID" value="PHAVU_001G146700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2109">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEMANSC"/>
    <dbReference type="OrthoDB" id="25778at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000407">
        <property type="term" value="C:phagophore assembly site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006914">
        <property type="term" value="P:autophagy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042594">
        <property type="term" value="P:response to starvation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045142">
        <property type="entry name" value="BCAS3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022175">
        <property type="entry name" value="BCAS3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048382">
        <property type="entry name" value="BCAS3_WD40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13268:SF0">
        <property type="entry name" value="BCAS3 MICROTUBULE ASSOCIATED CELL MIGRATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13268">
        <property type="entry name" value="BREAST CARCINOMA AMPLIFIED SEQUENCE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12490">
        <property type="entry name" value="BCAS3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21034">
        <property type="entry name" value="BCAS3_WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BCAS3 WD40" evidence="4">
        <location>
            <begin position="172"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="domain" description="BCAS3" evidence="3">
        <location>
            <begin position="601"/>
            <end position="746"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="924"/>
            <end position="966"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="954"/>
            <end position="965"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF21034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW34369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="975" mass="106417" checksum="F65F8E786ADE65AF" modified="2014-02-19" version="1">MKKGKSKNGGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSSDDHKDQVTWAGFDTLELDPSNCKRILLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPIGGDGHEGFRKSHPLLLVVSGDDNSNVNRNSTCLSGLESDDNVEMNSGNDFKSSTTVRFYSLKSHCYVHVLKFRSTVCMIRCSSQIVAVGLATQIHCFDAVTLQNKFCVLTYPVPQLAGQGTTGVNFGYGPMAVGPRWLAYASNTPLPSNLGCLSPQNCSTSSGISPSTTPRNGSLVARYAVESSRHLAAGIIKYCQDLLPDGSSSPMSSNSGVKVNRVTGIDTDNVGMVAVRDFVSKMIISQFKAHSSPLSALCFDPSGTLLVTASVYGNNINIFRIMPSFTCKSSGIPGSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLYILSPFGGDTGFRIISSQGEEPSLLPVFPLPWWYTPGSISYQQSLPPPAPVVLFVASRIKYSSFGWLNTVHNSAANYTGKVFVPSGAIAAIFHNSLSHSQLVNSKANPLEHILVYTPSGHVVQHELLPSVSSETSDTSLGNQSTSLLHMQEDEFRVKVEPIQWWDVCRRSEWPEREDTCINTFDRQGGIDRVQEKIGYSDIYGLDFLGISDGAGEKMVKSSSENMQERFHWYLSNAEVQGNFGRLPIWQKSKICFYSMSSVGDTFSATGEFEIERVPANEVEIKRKELLPAFDNFYSIRSSLSERGLAGERYLRPSSPVPNQGDYKETADVTVICHSKPASLSSTESSDGGSSRRIENLLDLDHVASSYQIHGEICLERTGTINVEPSLQNQIVMESPSRVLGNSKNVDFNADLISSPLFQKTNVTSDGRDSIGFGINENSALVLEHFSHETEFVEAKQEGAGISLTDGHCQTEEHDGSNLLTEVATDDVDSSSSHHEKEQLEEDEENDETLSDIFDFFKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXD6</accession>
    <name>V7CXD6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Glutaredoxin-dependent peroxiredoxin</fullName>
            <ecNumber evidence="3 9">1.11.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G186000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[glutaredoxin]-dithiol + a hydroperoxide = [glutaredoxin]-disulfide + an alcohol + H2O</text>
            <dbReference type="Rhea" id="RHEA:62624"/>
            <dbReference type="Rhea" id="RHEA-COMP:10729"/>
            <dbReference type="Rhea" id="RHEA-COMP:10730"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:35924"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.11.1.25"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peroxiredoxin family. Prx5 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.25" evidence="3 9"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXD6"/>
    <dbReference type="SMR" id="V7CXD6"/>
    <dbReference type="STRING" id="3885.V7CXD6"/>
    <dbReference type="Gramene" id="ESW34842">
        <property type="protein sequence ID" value="ESW34842"/>
        <property type="gene ID" value="PHAVU_001G186000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0541">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVISAWK"/>
    <dbReference type="OrthoDB" id="1882547at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008379">
        <property type="term" value="F:thioredoxin peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034599">
        <property type="term" value="P:cellular response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03013">
        <property type="entry name" value="PRX5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000020">
        <property type="entry name" value="Peroxiredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037944">
        <property type="entry name" value="PRX5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10430">
        <property type="entry name" value="PEROXIREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10430:SF16">
        <property type="entry name" value="PEROXIREDOXIN-5, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 9" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7 9" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="10">
        <location>
            <begin position="56"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine sulfenic acid (-SOH) intermediate" evidence="8">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR637944-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW34842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="216" mass="22886" checksum="4811B786C08DD6B4" modified="2014-02-19" version="1">MAASLTTFSRLFSSTTVSLLPSKTLPSKFSIRLPASRHAKPLRFSSSSSSTITAAIGVGDKLPEATFSFLDSDGEVKTTTVSELTKGKKAVLFAVPGAFTPTCSQKHVPGFVEKSGELKAKGVDTIACISVNDAFVMKAWKDDLKVNDEVLLLSDGNGTFTKAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKLFNLEEGGAFTFSGAQDILDVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXI4</accession>
    <name>V7CXI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">VQ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G123400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXI4"/>
    <dbReference type="STRING" id="3885.V7CXI4"/>
    <dbReference type="Gramene" id="ESW34088">
        <property type="protein sequence ID" value="ESW34088"/>
        <property type="gene ID" value="PHAVU_001G123400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SFCE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RFHALDS"/>
    <dbReference type="OrthoDB" id="665788at2759"/>
    <dbReference type="PhylomeDB" id="V7CXI4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039335">
        <property type="entry name" value="SIB1/2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008889">
        <property type="entry name" value="VQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33624">
        <property type="entry name" value="SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33624:SF2">
        <property type="entry name" value="SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05678">
        <property type="entry name" value="VQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VQ" evidence="2">
        <location>
            <begin position="35"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="100"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="149" mass="16702" checksum="AD27D7FD45DEDCB9" modified="2014-02-19" version="1">MDTAMRTTCVQQRAPTKKTKPKKKNIPHPVKVVYISNPMKIKTSASEFRALVQELTGQDAQSPPNPTRFHALDSSDDSSSDKVISVDDHVIPIPMDPDISVQQQQQHLQPSSSFEAPDDDDVFTPQMIENISALLPASLFYESPHLNYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D056</accession>
    <name>V7D056_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G264600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D056"/>
    <dbReference type="STRING" id="3885.V7D056"/>
    <dbReference type="Gramene" id="ESW35787">
        <property type="protein sequence ID" value="ESW35787"/>
        <property type="gene ID" value="PHAVU_001G264600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUQA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NEKPNRV"/>
    <dbReference type="OrthoDB" id="3518456at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:RNA nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18725">
        <property type="entry name" value="PIN_LabA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021139">
        <property type="entry name" value="NYN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35744">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35744:SF4">
        <property type="entry name" value="OS04G0464600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01936">
        <property type="entry name" value="NYN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="142"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="388" mass="45302" checksum="CC7C0D4327685303" modified="2014-02-19" version="1">MVTFKSYLSYRRTEIPFRIFRFRSTFFLSLEATCWHIYGDLRYYHSGSEWGKNQKLNPNEKPNRVGLFWDLDNRPPNAIPPYEVANKLRIAASSFGIVRYMVAYANSHTFSHVPQSVREKREEREKLHRLENKGVIKRNEPYRCRVCGRKFHTNDKLVNHFKQLHEREHRKRMSQIESARGSRRVKLVAKYSMKMEKYKKAASAILTPKVGYGLADELTRAGFWVQTVSDKLQAADRALQSHIVDVMDHRQVECVVLVSDDSDFVDVIKEARQRCLKTVVIGDIDDGVLKRTADTAFSWVEILMGKAKKQAVSVVKKWKDRDILKRIDWTCNPDADEKKYNVDDTIAETSEDDNFEDTCDEVDDVYKDDRGSWWELDSDNDVTKRQSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0G2</accession>
    <name>V7D0G2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G198600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0G2"/>
    <dbReference type="SMR" id="V7D0G2"/>
    <dbReference type="STRING" id="3885.V7D0G2"/>
    <dbReference type="Gramene" id="ESW35005">
        <property type="protein sequence ID" value="ESW35005"/>
        <property type="gene ID" value="PHAVU_001G198600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YARANKW"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000333">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000690">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000470">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At5g66520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046849">
        <property type="entry name" value="E2_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF537">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20430">
        <property type="entry name" value="Eplus_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="81"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="182"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="314"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="349"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="530"/>
            <end position="622"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="622" mass="70443" checksum="5C59EB43344DCB30" modified="2014-02-19" version="1">MSYSSGSNLILKTLRLKNPKLVLLERCCNVGDLKIVHAHFLRTHLFFDVFVASRLVAFCIESTTNLLHYALRVVSQIKNPNLFIYNALIRGCSTSQNPQNSFHYYIKALRFGVVPDNITHPFLVKACTQLESAPMGMQAHGQIIKHGFELDFFARNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIGGYHRCGDVESARQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFGALQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLRLNLILGTAVVDMYARCGDLGKAVQVFELLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTGVVPRDITFTAVLSACSHAGMVERGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFVLEMPVKPNAPIWRALLGACRIHKNVQVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKEKGVRKRPGYSLIEVDGKIHEFTVGDKTHPEIEKIERMWEDIILKKIQLVGYVGNTGETLFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRVVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0Y0</accession>
    <name>A0ACC3P0Y0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L009843</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="392" mass="42807" checksum="EEEE4DD4198D41F0" modified="2026-01-28" version="1">MMIDKQQYPTIEQKFAGQLHLRSNSNLSPHVGTCYGDLKRIALFQQRFSLENYSNAGLQFPVMPACKPTNNMHSIGSPVFVPSPLEKNWGTFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNVASGGAAGAVSSVFVYSLDYARTRLANDAKAGKKGGERQFNGLIDVYRKTLQSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGTLQDSFLASFALGWLVTIGASLASYPLDTVRRRMMMTSGEAVKYKSSLDALSQIVKNEGSKSLFKGGGANILRAVAGAGVLSGYDKLQLLLIGKKYGSGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P188</accession>
    <name>A0ACC3P188_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L003737</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967755">
        <property type="protein sequence ID" value="KAK6646241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="28167" checksum="769EE1855AE083D7" modified="2026-01-28" version="1">MDSAKTHGAVLACTDGAVLSVNQALEAIRELGIEGVQQSDPLVITSASLLNKLPVESSSFDSAILFWLSSDCPGDQLIQEILRVLKVGGIILIRKSSQSIVGSFDKIISDLQSKLLLAGFSEAQILQSIGIKAKKPSWKVGSAFALKKVIKSSPKIQIDVDSDLIDEDSLLTEEDLKKPQLPPGDCEIGSTRKACKNCTCGRAEEEDKVLKLGLTTEQINNPQSACGSCGLGDAFRCSTCPYKGLPAFKLGEKVALSGNFLAADI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEF3</accession>
    <name>V7AEF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Expp1 protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G050900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEF3"/>
    <dbReference type="STRING" id="3885.V7AEF3"/>
    <dbReference type="Gramene" id="ESW03904">
        <property type="protein sequence ID" value="ESW03904"/>
        <property type="gene ID" value="PHAVU_011G050900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ68">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DCNLSIQ"/>
    <dbReference type="OrthoDB" id="1885051at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017183">
        <property type="term" value="P:protein histidyl modification to diphthamide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044248">
        <property type="entry name" value="DPH3/4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21454">
        <property type="entry name" value="DPH3 HOMOLOG-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21454:SF44">
        <property type="entry name" value="EXPP1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW03904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="254" mass="28102" checksum="C0A0DBB1EE6A9ED0" modified="2014-02-19" version="1">MIMLLKMGMGEVFSMSMIRREDLVKRMVVMAVMAMFVVDAADTNDVYSPCFDAKVQKGDGFTFGVAFSDKQIFSPDNGPQLSPCDKRLQLANKGAQLAVFRPKVDEISLLTINRSTSDPGANGYMVAFAGKKYAARSLPIMFVDNTHTITSLSLVLEFQEGILQNLFWKSFGCDACPSGSSCLNQQDCAVPNTECQKNGGDICNVGIQLTFSGTDKNLDALNSWYEVKNLRQYSLYGLFSDLRDSIIGPYEKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFD0</accession>
    <name>V7AFD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">isoleucine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Isoleucyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G023400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>tRNA(Ile) + L-isoleucine + ATP = L-isoleucyl-tRNA(Ile) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:9666"/>
            <dbReference type="Rhea" id="RHEA-COMP:9695"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78528"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.5"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="1"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFD0"/>
    <dbReference type="STRING" id="3885.V7AFD0"/>
    <dbReference type="Gramene" id="ESW03553">
        <property type="protein sequence ID" value="ESW03553"/>
        <property type="gene ID" value="PHAVU_011G023400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0434">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLTYWNT"/>
    <dbReference type="OrthoDB" id="1706657at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA deacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006428">
        <property type="term" value="P:isoleucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07961">
        <property type="entry name" value="Anticodon_Ia_Ile_ABEc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00818">
        <property type="entry name" value="IleRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.730.10:FF:000025">
        <property type="entry name" value="Isoleucine--tRNA ligase cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000105">
        <property type="entry name" value="Isoleucine--tRNA ligase cytoplasmic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033709">
        <property type="entry name" value="Anticodon_Ile_ABEc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002301">
        <property type="entry name" value="Ile-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023586">
        <property type="entry name" value="Ile-tRNA-ligase_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780:SF1">
        <property type="entry name" value="ISOLEUCINE--TRNA LIGASE, CYTOPLASMIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42780">
        <property type="entry name" value="SOLEUCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19302">
        <property type="entry name" value="DUF5915"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00984">
        <property type="entry name" value="TRNASYNTHILE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="ValRS/IleRS/LeuRS editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="9">
        <location>
            <begin position="37"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding" evidence="10">
        <location>
            <begin position="348"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW03553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="802" mass="91779" checksum="0806EF4BFC28BF55" modified="2014-02-19" version="1" fragment="single">DNLTVAVDDDGCFTEKITDFSGCYIKQADKDIIEAVKAKGRLLKSGAFTHSYPYCWRSDTPLIYRAVPSWFVRVELLKEQLLENNKQTYWVPDFVKDKRFHNWLENARDWAISRSRFWGTPLPLWISEDEKEIVVIDSVEKLEKLSGVKVFDLHRHNIDHITIKSDSGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMDVINDYGADALRLYLINSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNTKRLEVEGLAPFVPFDQASLLKSSNVLDQWINSATQSLIHFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRSGEEDCRIALSTLYNVLLLSCKVMAPFTPFFTEVLYQNMRKVCEGSDESIHYCSFPTEEGKRGERIEQSVSRMMTIIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDINGKLKEYVLEELNVRSLVPCNDTLKYASLRAEPEFSVLGKRLGKLMGTVAKEVKAMSQENILAFENAGEVIIANHCLKLTDIKVLRDFKRPDGMTENEVDAAGDGDVLVILDLRPDDSLYEAGAAREIVNRIQKLRKKVALEPTDMVEVYFESLDDDKSVSQRVLHSQESYIRDAIGTQLLPNSLMPVHAVVLGEERFHGIASMSFGITLTRPALMFNKKAILSLFTGDAKSAHNLQTYLLSRDHSKLKSEFQDGNRKKIIDSIDQLPAVEVVLGEHVFLTVGDYNLAGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AID9</accession>
    <name>V7AID9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G173800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AID9"/>
    <dbReference type="Gramene" id="ESW05367">
        <property type="protein sequence ID" value="ESW05367"/>
        <property type="gene ID" value="PHAVU_011G173800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRMENIG"/>
    <dbReference type="OrthoDB" id="431454at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.430:FF:000003">
        <property type="entry name" value="Probable disease resistance protein At5g66910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="14"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="178"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="425"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="566"/>
            <end position="839"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="960"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="960" mass="109409" checksum="1B785B33DD122FF7" modified="2014-02-19" version="1" fragment="single">MAAEMVTGALVSTFVERTIDTLASRFVDIFRARKHKKKQLSDLKMKLLAIDVVAFDAEQKQFKDQSVRDWLLRAKDVVFDAEDLLDEIDYELSKSKVEAESQSATYKVWNSLKSSFVTFFENQIESRMEQVIEDLEDLATRSDILGLKKASGVGVGSGSRSKLTYTSLPNESVIYGRDEDKEFVLNWLTSDTHNNLSILSIVGMGGLGKTSLAQHVFDDPRIEGKFDIKAWVSVPQEFDVLNVSRAILDTITGSTDHSIQQEMVQRRLKENLRGKKFLLILDDVWNERQSKWEDVQKPLLFGGQGSRILLTTRSEKVSVTMRSEKQFLQVLSKDYCWDLFAKHAFQSANPQPHPDFLEIGKKIVEKCNGLPLALKTMGSLLHNKSSFWEWESIMKSEIWDFSEDESDILPALRLSYLHLPSHLKKCYRFDKECLVQLWLAENFLKSPLQRRSPTEVGEQYFNDLLSWSFFQQSGKEEKKHFIMHDLLNDLAKFVCEDICIRLGVDEPKGIPKTSRHFLFPGTDDLHFDEFGSLIDTQKLHTFLKTDWQTYEAFGSPQCSGMSIDDLFSKFKFIRVLSLSHCRNLTEVPKSVGNLKHLRSLDLSFTEIEKLPDSISLLYKLQILKLNHCQRLKELPSCLHQLDNLRCLEFINTEVNIVPAHLGKLKNLQVLMSSFYVEKSKEFSIQQLGELNLHGTLEADLKNKPHLVMLKLEWNIMGSSSIDSTKAGDVIENLRPSKHLKKLSVRNYVGKQLPNWLLDNLLLNLVSLALMNCICCQRLPPLGLLPSLKELKISGFDEIVRIDADFHGNNSCSFKSLCHKLESLPTNMHMLLPSLRRLWIEDCQRLVSFPEGGVPSNLKELKITKCSRLVGSLRGAFGDSSSLKRLRIEKMDAECFPDEGLLPLSLTSLGINLCQNLKQLGYKGFYQLSSLQSLAVSNCPNLQRSPEEGLLKSISDLQIIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIF1</accession>
    <name>V7AIF1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G146400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIF1"/>
    <dbReference type="Gramene" id="ESW05035">
        <property type="protein sequence ID" value="ESW05035"/>
        <property type="gene ID" value="PHAVU_011G146400g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1669972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892:SF2">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED _ V-ATPASE-RELATED _ VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="73" mass="8068" checksum="28354426D1FE5262" modified="2014-02-19" version="1" fragment="single">MSWDKTPVTTAISLREAPPSYGCSPSEEAHQAIVIDTLPQKINLISCESMIHISDIKLIRTDTTLDLSQKAEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJQ1</accession>
    <name>V7AJQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Bet v I/Major latex protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G183700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MLP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJQ1"/>
    <dbReference type="SMR" id="V7AJQ1"/>
    <dbReference type="Gramene" id="ESW05490">
        <property type="protein sequence ID" value="ESW05490"/>
        <property type="gene ID" value="PHAVU_011G183700g"/>
    </dbReference>
    <dbReference type="OMA" id="DWHINDS"/>
    <dbReference type="OrthoDB" id="1847301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000916">
        <property type="entry name" value="Bet_v_I/MLP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052006">
        <property type="entry name" value="MLP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31338">
        <property type="entry name" value="POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31338:SF16">
        <property type="entry name" value="POLYKETIDE CYCLASE_DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00407">
        <property type="entry name" value="Bet_v_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01037">
        <property type="entry name" value="Bet_v_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bet v I/Major latex protein" evidence="2">
        <location>
            <begin position="2"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="18312" checksum="BB6E92512A5D9157" modified="2014-02-19" version="1">MSLSGKISTELPVHATADKWFHIMSKKIHHIQHVADKVHGAKLHEGDDWHINDSVKHWTYTLDGKTVTCFETIESVDEENKRIAFKLFGEAIDEKYKVFTSTFEAIEKDGGSAAVKWSVEYEKVSEEVHAPYGYLELYDHVVRDIDAHLVEDEKVTANKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMZ9</accession>
    <name>V7AMZ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">RCK N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_010G095800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMZ9"/>
    <dbReference type="STRING" id="3885.V7AMZ9"/>
    <dbReference type="Gramene" id="ESW07022">
        <property type="protein sequence ID" value="ESW07022"/>
        <property type="gene ID" value="PHAVU_010G095800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1650">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARIPFRF"/>
    <dbReference type="OrthoDB" id="4834at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015386">
        <property type="term" value="F:potassium:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1530.20:FF:000007">
        <property type="entry name" value="K(+) efflux antiporter 2 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004771">
        <property type="entry name" value="K/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00932">
        <property type="entry name" value="2a37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46157:SF2">
        <property type="entry name" value="K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46157">
        <property type="entry name" value="K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0050">Antiport</keyword>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="4" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="504"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="606"/>
            <end position="626"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="632"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="661"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="689"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="722"/>
            <end position="745"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="765"/>
            <end position="785"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="806"/>
            <end position="835"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="878"/>
            <end position="896"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="908"/>
            <end position="929"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="941"/>
            <end position="964"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="13">
        <location>
            <begin position="986"/>
            <end position="1032"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="111"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="428"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="248"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW07022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1032" mass="112326" checksum="294B90EB494A3692" modified="2014-02-19" version="1">MDAAFRLPQSNVVLDGLNSCTVFGGRGFGCAFLGNLRTTTKDRFSRMNKIGSWSGSRVDCFGELKVLSGKRSLCWKRNELFRGNRKIWTKCQGNDSLSYLNGNGRNVDRVESADEDYGSSAESSEPLGEEGQEGRKEAGGEVVEEQNVDELKELLQKAKKELEAARENSIAFEEKVKKISETAIFLQDEAASSWNNVTSTLDIIQDIVSQEFVAKEAVQKATMALSLAEAKLQVAIESCEVTNDDKDIMQEEKELLDAKEDIKEGQTNLANCESKLRDLQCRKEEFQNEVNKLHEVAEQAQLKAAKAEEDVANIMHLAEKAVAAEIEAAQHVNDAEMALEKAEKSASSFNADTKDTLRVQEVVGIPEDEEVVQGFSGDDVLKREADISNDDELSPEIQSDINRQSLEDMAQSDYLSDHENGQLILDSSKEAEVETEKSKNVVQTKKQETQKDLTRENSSFAPKTLLKKSSRFFPASFFSFTADEADNTPASVFLDLMESVQKQLPKLIVGLLFIGAGLVLYTNRTERRAQLQQPEVIVTTVEESSTAKPPVRQLQDLPKRIKKIIASLPDQEVNEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGFGSAQVMVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRASFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAVVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPAITGTLGLLIFGKTLLVSLIGRAFGISLISSIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQFLASRFELHDVRSLLPEESETDDLQNHIIICGFGRVGQIIAQLLSEKLIPFVALDVRREEREKVFCRSCQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANN3</accession>
    <name>V7ANN3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">18 kDa Sin3-associated polypeptide</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G087700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SAP18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANN3"/>
    <dbReference type="SMR" id="V7ANN3"/>
    <dbReference type="STRING" id="3885.V7ANN3"/>
    <dbReference type="Gramene" id="ESW06924">
        <property type="protein sequence ID" value="ESW06924"/>
        <property type="gene ID" value="PHAVU_010G087700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06925">
        <property type="protein sequence ID" value="ESW06925"/>
        <property type="gene ID" value="PHAVU_010G087700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3391">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TYRMREI"/>
    <dbReference type="OrthoDB" id="440566at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003714">
        <property type="term" value="F:transcription corepressor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009651">
        <property type="term" value="P:response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.550:FF:000001">
        <property type="entry name" value="Histone deacetylase complex subunit SAP18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.550">
        <property type="entry name" value="ASAP complex, SAP18 subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010516">
        <property type="entry name" value="SAP18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042534">
        <property type="entry name" value="SAP18_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13082:SF0">
        <property type="entry name" value="HISTONE DEACETYLASE COMPLEX SUBUNIT SAP18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13082">
        <property type="entry name" value="SAP18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06487">
        <property type="entry name" value="SAP18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="13"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW06925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="151" mass="16733" checksum="79BADA8E411565FE" modified="2014-02-19" version="1">MSDGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGGHHSMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALAELGFEIGDYLDVAIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANP3</accession>
    <name>V7ANP3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G214000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANP3"/>
    <dbReference type="SMR" id="V7ANP3"/>
    <dbReference type="STRING" id="3885.V7ANP3"/>
    <dbReference type="Gramene" id="ESW05841">
        <property type="protein sequence ID" value="ESW05841"/>
        <property type="gene ID" value="PHAVU_011G214000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0715">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWNPAEE"/>
    <dbReference type="OrthoDB" id="10256793at2759"/>
    <dbReference type="PhylomeDB" id="V7ANP3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031072">
        <property type="term" value="F:heat shock protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DnaJ_zf"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Chaperone protein dnaJ 1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000058">
        <property type="entry name" value="Chaperone protein dnaJ GFA2, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Molecular chaperone DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.230.10">
        <property type="entry name" value="Heat shock protein DnaJ, cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01152">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012724">
        <property type="entry name" value="DnaJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF008035">
        <property type="entry name" value="PRK10767.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096:SF52">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="7">
        <location>
            <begin position="89"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="8">
        <location>
            <begin position="212"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="6">
        <location>
            <begin position="212"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="443" mass="49039" checksum="39DE967328F8E565" modified="2014-02-19" version="1">MVRSQGVTLINRLARRSFRDANDSVYQAVFQRGYRTLNSRPFNPSRVTGSFASNVGGGVSLKKWLLLGATNTYWEASRLIHGSAFLARDYYDILGVSKNASSSEIKKAYYGLAKRLHPDTNKDDPEAEKKFQEVSIAYEVLKDEERRQQYNQLGHDAYVNQQSTGFGGEGGFNPFEQMFRDHDFVKSFFHQNIGGEDVKTSIELSFMEAVQGCTKTLTFETDMLCNACGGSGVPPGTRPETCKRCKGSGVLFVQAGIFRMESTCGTCKGTGKIVSNFCKSCRGEKVVKGTKSVKLDIMPGIDTNETIKVFGVGGADPDRDHHGDLYVTIKVREDPVFRREGSDIHVDAVLSITQAILGGTIQVPTLTGEVVLKVRPGTQPGQKVVLKKKGIKTKNSYTFGDQYVHFNVNIPTNLTQRQRELIEEFAKEEQGEFDKRRSASASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7APC8</accession>
    <name>V7APC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">MYB transcription factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_010G136100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
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    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
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        <location>
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            <end position="62"/>
        </location>
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        </location>
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            <end position="189"/>
        </location>
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            <end position="123"/>
        </location>
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    <feature type="region of interest" description="Disordered" evidence="11">
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            <end position="220"/>
        </location>
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        </source>
    </evidence>
    <sequence length="289" mass="31765" checksum="C85D08787A3C69A7" modified="2014-02-19" version="1">MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGSQGSKDKPRIPKLKALPAPPSATTSSTTTATSQNAAPVPQNRPSDVAVPDSSPNDQDVKNPPRYNAMVFEALSALKDNNGSDLNAIVTFIEQKHQVPQNFRRALSTRLRRLVSQGKLEKVQNCYKIKKDVSSGTKSPPPKPKDVRPLQLQPQRQPPTSVFTASNATVKEAADTAAYRVADAESKSYLAAEAIKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA</sequence>
</entry>
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        </submittedName>
    </protein>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
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        </lineage>
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    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">cv. G19833</strain>
        </source>
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    </dbReference>
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        </source>
    </evidence>
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</entry>
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    </gene>
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            <taxon>Tracheophyta</taxon>
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            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
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        <reaction evidence="1">
            <text>Hydrolysis of Pro-|-Xaa &gt;&gt; Ala-|-Xaa in oligopeptides.</text>
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        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the peptidase S9A family.</text>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_009G020800g"/>
    </dbReference>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.120:FF:000001">
        <property type="entry name" value="Prolyl endopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000005">
        <property type="entry name" value="Prolyl endopeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.120">
        <property type="entry name" value="Prolyl oligopeptidase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002471">
        <property type="entry name" value="Pept_S9_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023302">
        <property type="entry name" value="Pept_S9A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002470">
        <property type="entry name" value="Peptidase_S9A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051167">
        <property type="entry name" value="Prolyl_oligopep/macrocyclase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42881">
        <property type="entry name" value="PROLYL ENDOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42881:SF2">
        <property type="entry name" value="PROLYL ENDOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02897">
        <property type="entry name" value="Peptidase_S9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00862">
        <property type="entry name" value="PROLIGOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50993">
        <property type="entry name" value="Peptidase/esterase 'gauge' domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00708">
        <property type="entry name" value="PRO_ENDOPEP_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase S9A N-terminal" evidence="8">
        <location>
            <begin position="14"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S9 prolyl oligopeptidase catalytic" evidence="7">
        <location>
            <begin position="497"/>
            <end position="725"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU368024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="730" mass="82374" checksum="4416B5F43DC0B2EE" modified="2014-02-19" version="1">MTSLSALNISLQYPPARRDDTVVEDYHGVKISDPYRWLEDPDAEEVKEFVQKQVKLTDSVLQECETRGKLRETITKLFDHPRYYAPFRRADKFFYFHNTGLQPQNILYVQESLEGEAEVLLDPNGFSEDGTVSLSTLSVSEDGKYLAYALSSSGSDWTTIKVLRTDDRNVEPDTLMWVKFSSISWTHDNKGFFYSRYPAPKDGDVVDAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYTFGGSVTDDGQYILLNIAEGCDPVNKLYYCDLSKIPNALEGFRNGNSLLPFVKLVDNFDAQYEAIANDDTVFTFLTNKDAPKYKLVRVDLKEPTVWADVLQESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLRTGSLLHQLPIDIGSVSEVSGRREDSVVFIGFTSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSEFQVKQDFVSGKDATKIPVFIVAKRDIVLDGSHPCLLYGYGGFNISITPYFSVSRVVMTRHLGVVFCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALGHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEHTDQSIQYPSTMLLTADHDDRVVPLHTLKLLATMQHVLCTSLEESPQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMAKMLEVHWIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU05</accession>
    <name>V7AU05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyanobacterial aminoacyl-tRNA synthetase CAAD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G148600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU05"/>
    <dbReference type="STRING" id="3885.V7AU05"/>
    <dbReference type="Gramene" id="ESW07666">
        <property type="protein sequence ID" value="ESW07666"/>
        <property type="gene ID" value="PHAVU_010G148600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1DZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AHGRNNT"/>
    <dbReference type="OrthoDB" id="2014299at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025564">
        <property type="entry name" value="CAAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033344">
        <property type="entry name" value="CURT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33222">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33222:SF3">
        <property type="entry name" value="PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14159">
        <property type="entry name" value="CAAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Cyanobacterial aminoacyl-tRNA synthetase CAAD" evidence="3">
        <location>
            <begin position="60"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW07666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="145" mass="15922" checksum="53498348F48619F5" modified="2014-02-19" version="1">MASIVASLLPPLLLPARNSHPGTFPTSSVSLLSGRRSNVSFVVKASGESSESSTSLTVFKSVQNVWDQPEDRLGLFGLGFAAVAAFWASTNLVAAVDKLPLFPTVFELIGIFYSLWFSYRYLIFKPDREEFFQILNKVATDILGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU28</accession>
    <name>V7AU28_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G103800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU28"/>
    <dbReference type="STRING" id="3885.V7AU28"/>
    <dbReference type="Gramene" id="ESW09142">
        <property type="protein sequence ID" value="ESW09142"/>
        <property type="gene ID" value="PHAVU_009G103800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0KJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KCRFSIE"/>
    <dbReference type="OrthoDB" id="670661at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374">
        <property type="entry name" value="AUXIN-INDUCED PROTEIN-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374:SF137">
        <property type="entry name" value="SAUR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="159" mass="18189" checksum="C615B284DAC6ED4F" modified="2014-02-19" version="1">MDPPKKPNKIREIVRLQQILKKWRRVANSSKTSGSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVELSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFEGILKMVERKDKFFTQKCRFSIEKMMGYCSSNHLAYSHQPQSPMCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVY5</accession>
    <name>V7AVY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G041300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVY5"/>
    <dbReference type="SMR" id="V7AVY5"/>
    <dbReference type="STRING" id="3885.V7AVY5"/>
    <dbReference type="Gramene" id="ESW08386">
        <property type="protein sequence ID" value="ESW08386"/>
        <property type="gene ID" value="PHAVU_009G041300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXWT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSTAMMY"/>
    <dbReference type="OrthoDB" id="2744543at2759"/>
    <dbReference type="UniPathway" id="UPA00113">
        <property type="reaction ID" value="UER00529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04301">
        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039143">
        <property type="entry name" value="GNPNAT1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355:SF15">
        <property type="entry name" value="GCN5-RELATED N-ACETYLTRANSFERASE 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355">
        <property type="entry name" value="GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="92"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="229" mass="25667" checksum="19E61F06940B3C62" modified="2014-02-19" version="1">MAAMGVAAQTQLQLEKRVSEGFSSKSMELKWVSPRISKSSHLEKTKKPLRPLFPIYISTDPLHVDPHRLRDLFADCNYSTQRFPTRPGPEPVDIHKLRIALSHSAVVVSVFCNLRHVNAVVPYHDNSSSLVADFFTPVSPSRDQLVGFGRAVSDYGLTASIYDVVVSPSLQRMGIGQMIVKKIARLLTNRDIYDIAALCSENERLFFKACGFGDDILHSTTMMYRRTVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW14</accession>
    <name>V7AW14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G043800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW14"/>
    <dbReference type="SMR" id="V7AW14"/>
    <dbReference type="STRING" id="3885.V7AW14"/>
    <dbReference type="Gramene" id="ESW08416">
        <property type="protein sequence ID" value="ESW08416"/>
        <property type="gene ID" value="PHAVU_009G043800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3I6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTPRYGH"/>
    <dbReference type="OrthoDB" id="1736050at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044246">
        <property type="entry name" value="ZFP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287:SF9">
        <property type="entry name" value="ZINC FINGER PROTEIN 4-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13912">
        <property type="entry name" value="zf-C2H2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="7">
        <location>
            <begin position="69"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="28612" checksum="C38286CA2591FFAB" modified="2014-02-19" version="1">MKYCEKKSFVPHQNQGSNSNTRVLVDFTKMSKDGDITQESSDEKVIDSSISHSKGAAKKNTKVVKTKIFSCNYCNKEFSTSQALGGHQNAHKQERVVAKHCQGFDVRGLTQFPYYPYYSSFYNSHSLHGRSFNEALGLRSDSMIHKHPRTSRYEHPLFKRDHEKLIFDGFRNMKNDYPIIKSDATLSLKLEDGNDRINLETLTLFTNDATISSSQLRKMTTLPTTEIVDHYVPKEISNEPSYNLDLSLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWS5</accession>
    <name>V7AWS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">CBS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G152100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homodimers and heterodimers.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWS5"/>
    <dbReference type="SMR" id="V7AWS5"/>
    <dbReference type="STRING" id="3885.V7AWS5"/>
    <dbReference type="Gramene" id="ESW09735">
        <property type="protein sequence ID" value="ESW09735"/>
        <property type="gene ID" value="PHAVU_009G152100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVK2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DILMRVM"/>
    <dbReference type="OrthoDB" id="418595at2759"/>
    <dbReference type="PhylomeDB" id="V7AWS5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="CDD" id="cd17781">
        <property type="entry name" value="CBS_pair_MUG70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17782">
        <property type="entry name" value="CBS_pair_MUG70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051462">
        <property type="entry name" value="CBS_domain-containing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000270">
        <property type="entry name" value="PB1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48108">
        <property type="entry name" value="CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48108:SF26">
        <property type="entry name" value="CBS DOMAIN-CONTAINING PROTEIN DDB_G0289609"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00564">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00666">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="500"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="45"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="111"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="214"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="279"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="PB1" evidence="7">
        <location>
            <begin position="379"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="7"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW09735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="525" mass="57355" checksum="BAC70D1E9A451EC4" modified="2014-02-19" version="1">MTTPNHSSRKTKRPTNIHRKSMSLPARNGISTPDDDGERTVKKLRLSKALTIPDGTTVSEACRRMATRRIDAVLLTDSNALLSGILTDKDVAMRVVAEGMKPEETAVSKVMTRNPVFVTSDTLAIEALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRVERATEQGSAIAAAVEGVELRQPSHLPVTNTFIETLRERVFKPSLTTIVGENTKVAIASVSDPVYVAAKRMRELQVNSAVIVMENKIQGILTSKDILMRVMAQNLSPDVTLVEKVMTPNPEYASSETTILEALTMMHNGKYLHLPVVDKDGTVIACLDVLQITHAAISLVESSPGASNDAANTVMQKFWDSAFALEPPEDFDSHSEASGLMTLDGADTTKSTYHSVGFGNPFAFKFEDLNGHVHRFYCAEHLDELQSAVMQIIGDFNEGERPKILYKDDEDDEIILETDNDLVAAVSYARSAGLKALKLDLQFANSTKPTEVSSGTASIQKSSTLSLRSGIFAGVVILTSISVLVYLKRSKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXS2</accession>
    <name>V7AXS2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G1801001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXS2"/>
    <dbReference type="Gramene" id="ESW10090">
        <property type="protein sequence ID" value="ESW10090"/>
        <property type="gene ID" value="PHAVU_009G1801001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW10090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16773" checksum="A771A061F63252ED" modified="2014-02-19" version="1" fragment="single">AVLPPKVMHTPFFAGPGFEFQNLLNWQGLQPFLGINLPYYEDLVRVFYTNAKFTPAGHLAIEICGKMIHIKEIDWMTITHLQYDGLKLTPGTIPEELNFDRGLALSSMIREDVKGQNLKNVGSLKMNDRLLHYTWVHILCPRGSNYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXV8</accession>
    <name>V7AXV8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G206900g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11 18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 18">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXV8"/>
    <dbReference type="SMR" id="V7AXV8"/>
    <dbReference type="STRING" id="3885.V7AXV8"/>
    <dbReference type="Gramene" id="ESW10409">
        <property type="protein sequence ID" value="ESW10409"/>
        <property type="gene ID" value="PHAVU_009G206900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0583">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KVEMRFA"/>
    <dbReference type="OrthoDB" id="193931at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd12195">
        <property type="entry name" value="CIPK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14663">
        <property type="entry name" value="STKc_SnRK3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000653">
        <property type="entry name" value="Non-specific serine/threonine protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000096">
        <property type="entry name" value="Non-specific serine/threonine protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.310.80:FF:000005">
        <property type="entry name" value="Non-specific serine/threonine protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.80">
        <property type="entry name" value="Kinase associated domain 1, KA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018451">
        <property type="entry name" value="NAF/FISL_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004041">
        <property type="entry name" value="NAF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43895">
        <property type="entry name" value="CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43895:SF91">
        <property type="entry name" value="CBL-INTERACTING SERINE_THREONINE-PROTEIN KINASE 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03822">
        <property type="entry name" value="NAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50816">
        <property type="entry name" value="NAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="14">
        <location>
            <begin position="21"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="NAF" evidence="15">
        <location>
            <begin position="303"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW10409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="49419" checksum="C097178F78B9BA82" modified="2014-02-19" version="1">MMGEKSSTGEANNSLLLHGKYELGRLLGHGTFAKVYHARNLKSGKSVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPSIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLVSAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNNRITISKIMESSWFKKAVPKNVMGVKREELDLEEKIKQQEECKSSTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRPASSVISRLEEVAKAVKFDVKKSESQVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNQLRPALKDIVWRTSPPENPTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AY37</accession>
    <name>V7AY37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G2147000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AY37"/>
    <dbReference type="Gramene" id="ESW10499">
        <property type="protein sequence ID" value="ESW10499"/>
        <property type="gene ID" value="PHAVU_009G2147000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELSMHIK"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW10499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="115" mass="13142" checksum="B51136932F9DC019" modified="2014-02-19" version="1" fragment="single">ACKMHSETRLAELAAQKLINMEPKNAGNYVLLSNIYAAAGNWDKVAKMRSFLRDRGLKKTPGCSWLELNGQVHEFRVADKSHKRWEDIYSILNVLELEAGDMEDYLELFDPSVIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ32</accession>
    <name>V7AZ32_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">VHS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G132300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TOM1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ32"/>
    <dbReference type="SMR" id="V7AZ32"/>
    <dbReference type="STRING" id="3885.V7AZ32"/>
    <dbReference type="Gramene" id="ESW09496">
        <property type="protein sequence ID" value="ESW09496"/>
        <property type="gene ID" value="PHAVU_009G132300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1087">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INMEPGQ"/>
    <dbReference type="OrthoDB" id="2018246at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035091">
        <property type="term" value="F:phosphatidylinositol binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043328">
        <property type="term" value="P:protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14231">
        <property type="entry name" value="GAT_GGA-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03561">
        <property type="entry name" value="VHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.90:FF:000028">
        <property type="entry name" value="TOM1-like protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008942">
        <property type="entry name" value="ENTH_VHS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004152">
        <property type="entry name" value="GAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038425">
        <property type="entry name" value="GAT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044836">
        <property type="entry name" value="TOL_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014645">
        <property type="entry name" value="TOM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002014">
        <property type="entry name" value="VHS_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45898">
        <property type="entry name" value="TOM1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45898:SF14">
        <property type="entry name" value="TOM1-LIKE PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03127">
        <property type="entry name" value="GAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00790">
        <property type="entry name" value="VHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036948">
        <property type="entry name" value="TOM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00288">
        <property type="entry name" value="VHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48464">
        <property type="entry name" value="ENTH/VHS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89009">
        <property type="entry name" value="GAT-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50909">
        <property type="entry name" value="GAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50179">
        <property type="entry name" value="VHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="VHS" evidence="7">
        <location>
            <begin position="12"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="GAT" evidence="8">
        <location>
            <begin position="178"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="287"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="304"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="356"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="371"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="431"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="445"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="459"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="505" mass="55266" checksum="F0BF26F975364FCD" modified="2014-02-19" version="1">MANNAAACADRATSDMLIGPDWAVNIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGSTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHSAEEYDDATIQASLQSDASGLSLIEIQNAEGLADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMLLVNTTTDEELLGKGLALNDSLQRVLCRHDDMVKGTSDSGAREAETTVLPLVNVNHEDDESEEDFAQLAHRSSRDSHAQNRKPVYDKAEPGRINPVIPPPPASKKPVYSGTGVVDYLSGDTYKTEGSPQNSERTSFAAPVHSSPNPTSSVSSSRPHAVSTSAPIFSSQPVYDEQPSSERLPQAPLDTQSSGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7B023</accession>
    <name>V7B023_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G006000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B023"/>
    <dbReference type="Gramene" id="ESW11149">
        <property type="protein sequence ID" value="ESW11149"/>
        <property type="gene ID" value="PHAVU_008G006000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7GM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MDAQMQE"/>
    <dbReference type="OrthoDB" id="653441at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37194">
        <property type="entry name" value="T2E6.7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37194:SF2">
        <property type="entry name" value="T2E6.7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="93" mass="10350" checksum="734C700CE992B5A8" modified="2014-02-19" version="1">METQSCDAKSHIKATFRLGSESYSVEPKKGSLSEQLVSLKEESMTILKDFITKHNVPHDVPDESLEVSSDDDDIDADDIPEKPQAKSKKTKLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2V3</accession>
    <name>V7B2V3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">HP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G238200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the villin/gelsolin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2V3"/>
    <dbReference type="SMR" id="V7B2V3"/>
    <dbReference type="STRING" id="3885.V7B2V3"/>
    <dbReference type="Gramene" id="ESW10791">
        <property type="protein sequence ID" value="ESW10791"/>
        <property type="gene ID" value="PHAVU_009G238200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0443">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPASFWV"/>
    <dbReference type="OrthoDB" id="6375767at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051693">
        <property type="term" value="P:actin filament capping"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007015">
        <property type="term" value="P:actin filament organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051014">
        <property type="term" value="P:actin filament severing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd11290">
        <property type="entry name" value="gelsolin_S1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11289">
        <property type="entry name" value="gelsolin_S2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11292">
        <property type="entry name" value="gelsolin_S3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11293">
        <property type="entry name" value="gelsolin_S4_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11288">
        <property type="entry name" value="gelsolin_S5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11291">
        <property type="entry name" value="gelsolin_S6_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000001">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000002">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000033">
        <property type="entry name" value="Villin-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.950.10:FF:000004">
        <property type="entry name" value="Villin-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000028">
        <property type="entry name" value="Villin-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000038">
        <property type="entry name" value="Villin-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.950.10">
        <property type="entry name" value="Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007123">
        <property type="entry name" value="Gelsolin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036180">
        <property type="entry name" value="Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007122">
        <property type="entry name" value="Villin/Gelsolin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003128">
        <property type="entry name" value="Villin_headpiece"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036886">
        <property type="entry name" value="Villin_headpiece_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11977:SF120">
        <property type="entry name" value="ACTIN FILAMENT BUNDLING PROTEIN P-115-ABP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11977">
        <property type="entry name" value="VILLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00626">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02209">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00597">
        <property type="entry name" value="GELSOLIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00262">
        <property type="entry name" value="GEL"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00153">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82754">
        <property type="entry name" value="C-terminal, gelsolin-like domain of Sec23/24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47050">
        <property type="entry name" value="VHP, Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51089">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0117">Actin capping</keyword>
    <keyword evidence="7" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="6" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="HP" evidence="10">
        <location>
            <begin position="897"/>
            <end position="962"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="741"/>
            <end position="782"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="858"/>
            <end position="878"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW10791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="962" mass="107437" checksum="F8DD0405906E511D" modified="2014-02-19" version="1">MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGAMRHDIHYWLGKDTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKVFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTAGDDDKATDSRPLKLLCIEKGQAEPVEADSLKRELLDTNKCYILDCGFEVFVWMGRNTSLDERKSASGVADELACGIDKLKPQIIRVIEGFETVMFRSKFDSWPQTADVTVSEDGRGKVAALLKRQGVNVKGLLKAVPVREEPQPHIDCTGHLQVWRVKGQEKIILQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEEQASANSLASKMVESMKFLACQARIYEGNEPVQFYSILQSLIVFKGGLGEGYKTYIAGKEIPDETYDENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTTAEDQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREAESDPHLFSCHFSKGNLKVTEVYNFSQDDLMTEDIFILDCHLEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVIMEGSEPPFFTRFFKWDSAKSSMLGNSFQRKLTLVKSGGAPLLDKPKRRTPVSYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPVVRKLYPKSVTPDSAILAPKSAAIAALSSSFEQPPSARETMIPRSLKVSPVMPKSNPDKIDKENSVSTRVESLTIQEDVKENEVEDEEGLVIYPFERLKITSTDPITSIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMALQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="65" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3C3</accession>
    <name>V7B3C3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Phospholipid-transporting ATPase</fullName>
            <ecNumber evidence="15">7.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_008G081700g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="20" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11 15">
            <text>ATP + H2O + phospholipidSide 1 = ADP + phosphate + phospholipidSide 2.</text>
            <dbReference type="EC" id="7.6.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 15">Membrane</location>
            <topology evidence="1 15">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.1" evidence="15"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7B3C3"/>
    <dbReference type="STRING" id="3885.V7B3C3"/>
    <dbReference type="Gramene" id="ESW12065">
        <property type="protein sequence ID" value="ESW12065"/>
        <property type="gene ID" value="PHAVU_008G081700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12066">
        <property type="protein sequence ID" value="ESW12066"/>
        <property type="gene ID" value="PHAVU_008G081700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0206">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QALRCGR"/>
    <dbReference type="OrthoDB" id="377733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140326">
        <property type="term" value="F:ATPase-coupled intramembrane lipid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045332">
        <property type="term" value="P:phospholipid translocation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02073">
        <property type="entry name" value="P-type_ATPase_APLT_Dnf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1110.10:FF:000230">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000221">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000001">
        <property type="entry name" value="Phospholipid-transporting ATPase IC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006539">
        <property type="entry name" value="P-type_ATPase_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032631">
        <property type="entry name" value="P-type_ATPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01652">
        <property type="entry name" value="ATPase-Plipid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF148">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16209">
        <property type="entry name" value="PhoLip_ATPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 13 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 14 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 13 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="420"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="478"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="1062"/>
            <end position="1083"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="1135"/>
            <end position="1153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="1165"/>
            <end position="1184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="1191"/>
            <end position="1213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="1233"/>
            <end position="1252"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase N-terminal" evidence="17">
        <location>
            <begin position="158"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="18">
        <location>
            <begin position="1022"/>
            <end position="1262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="16">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="active site" description="4-aspartylphosphate intermediate" evidence="12">
        <location>
            <position position="547"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="547"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="547"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="548"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="549"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="549"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="664"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="705"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="728"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="765"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="845"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="846"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="847"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
    </feature>
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        <location>
            <position position="970"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="976"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="996"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
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        <location>
            <position position="999"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
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        <location>
            <position position="1000"/>
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        </ligand>
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        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008109"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00034036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU362033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF16209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW12065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1288" mass="145464" checksum="FAF64CABEAD0CE24" modified="2014-02-19" version="1">MSSDESLLLESDPRPVIHHRRGKSGSRTYLCGHGSFSSSVFEAALADISDLDVKERNKEAVLASDCSFHPASFSNSNCSDTCAVESKFPWECPTRERRRSASWGAMELHDADSRSVPFEISGGASHVQDRLNSKSQRIRHRSVQFDDPAFQEDGARLIYINDPRKTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVASESCDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLECYMNRETLWLSVFLFIMCLVVALGMCLWLVRHKNQLDTLPYYRKRYFTNGPDNGKRYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASIHGKNYGSSLPMVDNTAAADVTPKRRWKLKSEIAVDSELMIMLQGNADREERVSGHEFFLTLAACNTVIPIHGDGGFSSCGTTGLNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADSSMFSILENGRESNNRIQHTTQSHLNEYSSEGLRTLVIGSRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGRRSLKHKTNAGHGDLLDIPNGFPKWTPGKEEGTIAPLALIIDGNSLVYILEKELESELFDLAISCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGIQDKDLSHRTLLQYPKLYGSGHRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLGMDINRWVLITHFAIWGSIIITYGCMVILDSIPVFPNYWTIYNLARSPTYWVTILLIIIVSLLPRFICKVVYQIFWPSDIQIAREAELMRKRQANLRPRQQVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3D1</accession>
    <name>V7B3D1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G253600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DESIGUAL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3D1"/>
    <dbReference type="STRING" id="3885.V7B3D1"/>
    <dbReference type="Gramene" id="ESW10961">
        <property type="protein sequence ID" value="ESW10961"/>
        <property type="gene ID" value="PHAVU_009G253600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRFH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKPRESC"/>
    <dbReference type="OrthoDB" id="1861835at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009606">
        <property type="entry name" value="DEAL/Modifying_wall_lignin1/2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052222">
        <property type="entry name" value="DESIGUAL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31769">
        <property type="entry name" value="OS07G0462200 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06749">
        <property type="entry name" value="DUF1218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="76"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="121"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="220"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="228"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW10961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="262" mass="28614" checksum="27179D4DDD262F9C" modified="2014-02-19" version="1">MAITHADLQPSRSKTDLSSKTGAFLMVLTILIGLFCFILCLIAEATRSEVTWMNTGGKENRAKSECAYSGSGKVPLLCAASAFVGLAFAMVMQHTYMLIAVSKSSPSLLTWDPHSPSAKSLTWQAAFFFVTTWICFGVAEILLLAALGVESGHLKNWWKPRTGCYNIREGLFSAAGVLALTTVFLAAGLYLTALRAQKMVEEVASVRREVLEASALYASPPRSPQPHYMSTVSRENPTSRENQNELLLSVFPTPFVKSFEFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3M1</accession>
    <name>V7B3M1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3'-5' exonuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G111200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3M1"/>
    <dbReference type="SMR" id="V7B3M1"/>
    <dbReference type="STRING" id="3885.V7B3M1"/>
    <dbReference type="Gramene" id="ESW12424">
        <property type="protein sequence ID" value="ESW12424"/>
        <property type="gene ID" value="PHAVU_008G111200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4373">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSRWDAY"/>
    <dbReference type="OrthoDB" id="1920326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06141">
        <property type="entry name" value="WRN_exo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.10:FF:000054">
        <property type="entry name" value="Werner Syndrome-like exonuclease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051132">
        <property type="entry name" value="3-5_Exonuclease_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13620">
        <property type="entry name" value="3-5 EXONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13620:SF105">
        <property type="entry name" value="OS01G0737700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="3">
        <location>
            <begin position="54"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="25355" checksum="76D39E7056DDAD44" modified="2014-02-19" version="1">MLDQNGVPISSQNATSTRVAAISVVDHCLPYDTHNLYDVTFHTHTIHTLLTSDPSLVHSWISTNVRSNRTQLMVGLDIEWRPNTQRNMQNPVATLQLCLGQHCLVFQILHSPSIPPSLVSFLADPNITFVGVGIEEDAEKLLEDYNLHVVNVRDLRSLAAQKLGDRELNQAGIKSLGLRVLGLEVEKPKRVTRSRWDNPWLTPVQVQYATVDAFLSYEIGRSLSSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7B569</accession>
    <name>V7B569_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G156000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10 16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B569"/>
    <dbReference type="SMR" id="V7B569"/>
    <dbReference type="STRING" id="3885.V7B569"/>
    <dbReference type="Gramene" id="ESW12959">
        <property type="protein sequence ID" value="ESW12959"/>
        <property type="gene ID" value="PHAVU_008G156000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KMNDSVC"/>
    <dbReference type="OrthoDB" id="272141at2759"/>
    <dbReference type="PhylomeDB" id="V7B569"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006972">
        <property type="term" value="P:hyperosmotic response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009651">
        <property type="term" value="P:response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd14137">
        <property type="entry name" value="STKc_GSK3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000009">
        <property type="entry name" value="Glycogen synthase kinase-3 beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000082">
        <property type="entry name" value="Shaggy-related protein kinase kappa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050591">
        <property type="entry name" value="GSK-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039192">
        <property type="entry name" value="STKc_GSK3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24057">
        <property type="entry name" value="GLYCOGEN SYNTHASE KINASE-3 ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24057:SF36">
        <property type="entry name" value="SHAGGY-RELATED PROTEIN KINASE EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 11 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="66"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW12959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="402" mass="45728" checksum="E6559330D0703450" modified="2014-02-19" version="1">MASTIGIPDDDSMIVEKLPEEINEMKIKDEKEMDTAMVDGNGTETGRIIVTTIGGRLGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVYRVVKHYSKANQRMPLIYVKLYTYQICRALAYIHGCVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALDACVHPFFDELRDPNTRLPNGRPMPPLFNFKPQELKGVTLELLCKLVPEHARKQCPSLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B591</accession>
    <name>V7B591_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Beta-glucosidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G136500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B591"/>
    <dbReference type="STRING" id="3885.V7B591"/>
    <dbReference type="Gramene" id="ESW12720">
        <property type="protein sequence ID" value="ESW12720"/>
        <property type="gene ID" value="PHAVU_008G136500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTMIQHY"/>
    <dbReference type="OrthoDB" id="1332614at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF154">
        <property type="entry name" value="BETA-GLUCOSIDASE 9-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW12720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="467" mass="53342" checksum="DB20204866E049A8" modified="2014-02-19" version="1" fragment="single">IGETTTSPYDSSLGDQQKFYHFPKRESFPPNFLFGAGTSALQVEGAASEGGRGPGIWDDRINRNKGSFIDGDKFPTMIQHYNRYKEDVQHLKYLGINSYRMSISWSRVLPDGTIKGGVNLEGVDFYNHLINELLANGITPFVTILHFDYPLAIQKNLHGFLNSSIVNYYKDYCELLFKTYGDRVKHWTTVNEPQIVGLFTYMHGYDNDDPEPCQATKLCKQAYTVVHNYILCHATAVKLYRENFQATQGGEIGLVIGSESFEPYSSKLEDVAAADRLTDFLIGWILDPVVYGDYPKIMRELVGNRLPNFTEDEKKMVAGSIDFIGINYYTSHFAKHETNKTNITLSDNYDALARSEEGLYNILQHIKKKYQNPKIYITENGIPSFNITNPLKDIHRIKYLATHLNYTKAAIDNGVRVGGYFVWAAFDTFEFRAGFSQNWGIIHVDFKNNLKRCPTIAGKWYKRFLNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5D6</accession>
    <name>V7B5D6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific lipid-transfer protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G083400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5D6"/>
    <dbReference type="SMR" id="V7B5D6"/>
    <dbReference type="STRING" id="3885.V7B5D6"/>
    <dbReference type="Gramene" id="ESW12083">
        <property type="protein sequence ID" value="ESW12083"/>
        <property type="gene ID" value="PHAVU_008G083400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4CI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTIAPCL"/>
    <dbReference type="OrthoDB" id="1373057at2759"/>
    <dbReference type="PhylomeDB" id="V7B5D6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01960">
        <property type="entry name" value="nsLTP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00234">
        <property type="entry name" value="Tryp_alpha_amyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00382">
        <property type="entry name" value="LIPIDTRNSFER"/>
    </dbReference>
    <dbReference type="SMART" id="SM00499">
        <property type="entry name" value="AAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00597">
        <property type="entry name" value="PLANT_LTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756283" description="Non-specific lipid-transfer protein" evidence="4">
        <location>
            <begin position="30"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW12083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="123" mass="12577" checksum="DE30FD6C8B9C548E" modified="2014-02-19" version="1">MASPLVLQVTCVVVVLMVGFGHIMPSAEAAIPCGSVQLAVAPCISYLTGPAGTKVPAPCCNGVKRVNDQSKTTPDRQAVCSCLKNTALRIPGINVPRLAALAGACGVNLPYKVTPSIDCNTVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5U5</accession>
    <name>V7B5U5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Retrotransposon gag protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G172600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5U5"/>
    <dbReference type="SMR" id="V7B5U5"/>
    <dbReference type="Gramene" id="ESW13159">
        <property type="protein sequence ID" value="ESW13159"/>
        <property type="gene ID" value="PHAVU_008G172600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1430821at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="52" mass="6155" checksum="C44197621F3F1597" modified="2014-02-19" version="1">MDEEDPYTHLSTFYELVGTMVFEEDDIESVYLRLFPFSLVGKAKEWLKSHPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7U4</accession>
    <name>V7B7U4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G153600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7U4"/>
    <dbReference type="STRING" id="3885.V7B7U4"/>
    <dbReference type="Gramene" id="ESW12928">
        <property type="protein sequence ID" value="ESW12928"/>
        <property type="gene ID" value="PHAVU_008G153600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0058">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YANITHA"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015421">
        <property type="term" value="F:ABC-type oligopeptide transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000218">
        <property type="entry name" value="Multidrug ABC transporter ATP-binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF19">
        <property type="entry name" value="ABC TRANSPORTER B FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="1"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="25668" checksum="C0AD80F9DB756B34" modified="2014-02-19" version="1">MPVLEHLDFSIEENQVIAIVGLSGSGKSTLLNLLLRLYEPSSGQIYIDGFPLRELDIRWLRQHIGYVAQESHLFHMDIKSNIKYGCPGNIKQEDIERAAKKAYAHDFISSLPNGYETLVDDNALSGGQKQRIAITRAILRDPVIMILDEATSALDSECEHYVKESLYALKDECKRRTIIIIAHRLSTAKAADKIFVMDDGRIIEMGDHEGLMLKDGLYAKLNKIQANI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8Q7</accession>
    <name>V7B8Q7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Bromodomain associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G241800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8Q7"/>
    <dbReference type="STRING" id="3885.V7B8Q7"/>
    <dbReference type="Gramene" id="ESW13970">
        <property type="protein sequence ID" value="ESW13970"/>
        <property type="gene ID" value="PHAVU_008G241800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2389">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DHLWENS"/>
    <dbReference type="OrthoDB" id="436852at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005669">
        <property type="term" value="C:transcription factor TFIID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00076">
        <property type="entry name" value="HFD_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006565">
        <property type="entry name" value="BTP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037818">
        <property type="entry name" value="TAF8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46338">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46338:SF13">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07524">
        <property type="entry name" value="Bromo_TP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00576">
        <property type="entry name" value="BTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Bromodomain associated" evidence="6">
        <location>
            <begin position="39"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="16"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="290" mass="32358" checksum="CBBBFC8A3CB48688" modified="2014-02-19" version="1">MNPMLKDSNTKATSKLPRRGKRKKKGLEVKDAQVAENPSEFSFAIAKIAVAQICRSAGFKTTKSNALETLTAVSTRYLETIVRLGASFASASNRTDSNLFDLVNGIHDLCSVEGFPGGSAIHKGDLLRSSALREIMNFVNLSDKVPFAKPIKCRDVSEVTIDSGTLTCFSNQAKTHIPRWLPHFPEQNCDQVLVKERKCGEKYWEHSFAGDENSVISQSNHMNGKEGKDTRMELPEGREKMKFKIRGEEEKHVGLGVNMLTGVCKGRKRVSWNHNKMNGCIIDNNQDEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B995</accession>
    <name>V7B995_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sister chromatid cohesion protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G1633001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B995"/>
    <dbReference type="STRING" id="3885.V7B995"/>
    <dbReference type="Gramene" id="ESW13046">
        <property type="protein sequence ID" value="ESW13046"/>
        <property type="gene ID" value="PHAVU_008G1633001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1525">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GECMETS"/>
    <dbReference type="OrthoDB" id="200660at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007064">
        <property type="term" value="P:mitotic sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039776">
        <property type="entry name" value="Pds5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12663">
        <property type="entry name" value="ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12663:SF50">
        <property type="entry name" value="SISTER CHROMATID COHESION PROTEIN PDS5 HOMOLOG B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20168">
        <property type="entry name" value="PDS5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW13046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="513" mass="57218" checksum="EAE995719F33B66D" modified="2014-02-19" version="1" fragment="single">ENDKAHIRLAAAKAIIRLARKWDLHITPQIFQFCILIAKDSSLFVSSTFLCKTQKLLKEHKLPMRFACAFALAATNGTGNQQYENYKYMAEFIRDYSIVAHKRETSATQGVIIDYPAYILVFLIHVLARSNDFPFEVCPDEKIYADVFRPLFFLLQALVDINIVNGHLNIVDDAFQHTVSIFRAIRMVEDAVDAQMTTKLHMLAEFGIFTLNELSHGGISKLQTPGKILLPSSLYRVTLTTSKCPKSFFDENFLRRVFHALKEITVAQKGGVGVIDAKQTAKKLSKHGHKGKQDVKKSNINIDGVLDLASSKPDDLSRREITNAKTAKPDIPSMKRRKCVSVSSPGSVGLPECSKIAKQQKIPSKHCGKTIEKNILSSSDSVCSKGSLYESHVQTRKSKRAAACSLENAVTSSKHTVEPFKCPRTKRKDTCDSKKQDILEDVSNKNNFSLREPGEYSLGGVKPALTRRLAAKEKTPLNKENTNVNTRGECMETSASEVVSTNANAVRRTRRKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBE3</accession>
    <name>V7BBE3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metallo-beta-lactamase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G029700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBE3"/>
    <dbReference type="SMR" id="V7BBE3"/>
    <dbReference type="STRING" id="3885.V7BBE3"/>
    <dbReference type="Gramene" id="ESW14930">
        <property type="protein sequence ID" value="ESW14930"/>
        <property type="gene ID" value="PHAVU_007G029700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0813">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDIVAYV"/>
    <dbReference type="OrthoDB" id="17458at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000534">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.15.10:FF:000032">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="entry name" value="Ribonuclease Z/Hydroxyacylglutathione hydrolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041516">
        <property type="entry name" value="LACTB2_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050662">
        <property type="entry name" value="Sec-metab_biosynth-thioest"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23131">
        <property type="entry name" value="ENDORIBONUCLEASE LACTB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23131:SF0">
        <property type="entry name" value="ENDORIBONUCLEASE LACTB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17778">
        <property type="entry name" value="WHD_BLACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="Metallo-hydrolase/oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallo-beta-lactamase" evidence="1">
        <location>
            <begin position="228"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="54436" checksum="7D1A8EAB70D827E9" modified="2014-02-19" version="1">MAAHRLALVIQSSSKDDEFLLLKQSRPPKFHDEEYDSFVDSDLWDLPSAQLNPLPPESDPPLLLEAGPSHAESEDFDLRKFDIRSALDEVFGQLGFGAVEGGGWKFLKYVKEAAFGPDLPVNTVFIVGKLVAAEDKNSIDSYRWMTIRSCLNWIQQVKPSGDRVGPLIVLGLINESSFSTKWKVPPAINHQEYPPGVIIIPMRSRTLKPFHTTNLVVFAPENFPNNSEENNFIASGDALIVDPGCLSEFHGELEKVVNALPRRLVVFVTHHHHDHVDGLSVIQKCNPEAILVAHEKTMHRISRDDWSLGYTSVRGDEDIVIGGHRLSTIYAPGHTDGHMALLHANSHSLIVGDHCLGQGSAVLDIRAGGNMSDYFQTTYKFLELSPHALIPMHGRVNVWPKQMLCGYLKNRRSREANILKAIEGGAKTLFDIIESVYSDVDRRAWIAASSNVRLHVDHLAQQHKLPKDFSLETYNSSLITFVDNVGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBM2</accession>
    <name>V7BBM2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G057700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBM2"/>
    <dbReference type="SMR" id="V7BBM2"/>
    <dbReference type="Gramene" id="ESW15257">
        <property type="protein sequence ID" value="ESW15257"/>
        <property type="gene ID" value="PHAVU_007G057700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNACISN"/>
    <dbReference type="OrthoDB" id="750109at2759"/>
    <dbReference type="PhylomeDB" id="V7BBM2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000681">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001211">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000196">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At4g14850"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000668">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF398">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="72"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="345"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="376"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="593"/>
            <end position="685"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW15257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="685" mass="75839" checksum="EA4EE67DECB742C7" modified="2014-02-19" version="1">MNAPSPNLLGSLLESAVSTHSSLLGRAVHALILRTHDTPLSSFLCNHLVNMYSKLDRLNSAELLLSLTNPRTVVTWTSLISGCVHNRRFTSAFLHFSNMRRESVLPNDFTFPCVFKASGSLHMPFTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRVEARNMFEEMPHRNLATWNAYISNAVQDGRCLDAVAAFKKFLCEGGEPNAITFCVFLNACADMVSLELGIQVHGFIVRSRYREDVSVSNGLIDFYGKCGDIVSSEMVFSTIGGGRRNVVSWCSMLAALVQNHEEERACTVFLKARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEENIYVGSALVDLYGKCGSIEKAEQVFREMPEKNLVTWNAMIGGYAHLGDVDMALSLFEEMTLSSFGITPNYVTLVSVLSACSRAGAVERGLHIFESMRGRYGIEPGAEHYACIVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGSCKMHGKTKLGKIAAEKLFQLDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDVGIKKNVGYSWVAVKNRVHVFQAKDSSHENNSEIQAMLAKLRGEMKKAGYVPDTNLSLFDLEEEEKASEVWYHSEKIALAFGLIALPHGVPIRITKNLRICADCHSAIKFISKIVGREIIVRDNNRFHHFKNGWCSCKDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCT3</accession>
    <name>V7BCT3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G268200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCT3"/>
    <dbReference type="SMR" id="V7BCT3"/>
    <dbReference type="STRING" id="3885.V7BCT3"/>
    <dbReference type="Gramene" id="ESW14286">
        <property type="protein sequence ID" value="ESW14286"/>
        <property type="gene ID" value="PHAVU_008G268200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0776">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASFTHEC"/>
    <dbReference type="OrthoDB" id="1923994at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004659">
        <property type="term" value="F:prenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="entry name" value="Farnesyl Diphosphate Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43281">
        <property type="entry name" value="FARNESYL DIPHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43281:SF6">
        <property type="entry name" value="HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="Terpenoid synthases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW14286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="29361" checksum="83F9C735DE8F6B92" modified="2014-02-19" version="1">MPGTILFNVSASFGLRFPRQARSPLPVKPTPLTIPTPQPHWASLQADIEAYLKRTIPLKEPLEVYEPMHRLAFAAPRSAAPALCLAACELVGGQRRHAMDAAAALLLNLANAHAHEEIGQGEGSNVALLTGDGIVPFGFELLARGAGPGSGSPERVMRVIIEISRAVGSGGLIDSLQMKKSVEGEGESVKRVVEKGEGGLHACGAACGAVVGGGSEEEIERLRRFGFHVGMMRGMAQRALNKEDVEEHRNLALKELHLFKNTDLSIISTFLNFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD79</accession>
    <name>V7BD79_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="4">3.4.19.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Deubiquitinating enzyme MINDY-3</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G079400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MINDY deubiquitinase family. FAM188 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="4"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD79"/>
    <dbReference type="STRING" id="3885.V7BD79"/>
    <dbReference type="Gramene" id="ESW15525">
        <property type="protein sequence ID" value="ESW15525"/>
        <property type="gene ID" value="PHAVU_007G079400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2871">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VLQTKWP"/>
    <dbReference type="OrthoDB" id="10263628at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990380">
        <property type="term" value="F:K48-linked deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071108">
        <property type="term" value="P:protein K48-linked deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025257">
        <property type="entry name" value="MINDY-3/4_CD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039785">
        <property type="entry name" value="MINY3/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003903">
        <property type="entry name" value="UIM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12473">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12473:SF8">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE MINDY-4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13898">
        <property type="entry name" value="MINDY-3_4_CD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01174">
        <property type="entry name" value="DUF4205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00726">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50330">
        <property type="entry name" value="UIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Deubiquitinating enzyme MINDY-3/4 conserved" evidence="8">
        <location>
            <begin position="110"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="557"/>
            <end position="582"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="46"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="608" mass="66445" checksum="BB19A0327E6B42EF" modified="2014-02-19" version="1">MGDRGEDEDLQMAIRMSMQRATPETKRSKPQDAAAGAVSESPEDSPESKTRRRELMAAAAEKRIAAAVRVLPSSLPPGKKSGELGRREEFRLKSVNLSKELSPEEANQLFAMVFGTEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKHIIFFCDELKDVSCMPQKGPGASFKSLSVPSYNFSALTEGVKVRALVRSMGEILFSCGSNRRAVIATLSIPENDIRRFEGISEDEVITKSLQGLSIESAVDLQKVLRVETCTSQMTALQRLEANLPFFQSRMGALLFLISALISRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFLKGISRDVEVGFLTLLESLNFCKVGQHLKSPKWPIWVVGSESHYTVLFALDPSVQSENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVLRETDIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSAGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSAPSASDSAGKDNEVSKPEPSQHAPLVDCIRTRWARATCSWFGDPPSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDL3</accession>
    <name>V7BDL3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G113300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDL3"/>
    <dbReference type="SMR" id="V7BDL3"/>
    <dbReference type="STRING" id="3885.V7BDL3"/>
    <dbReference type="Gramene" id="ESW15912">
        <property type="protein sequence ID" value="ESW15912"/>
        <property type="gene ID" value="PHAVU_007G113300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPDEIWS"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754204" description="FAD-binding PCMH-type domain-containing protein" evidence="7">
        <location>
            <begin position="25"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="8">
        <location>
            <begin position="76"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="550" mass="61413" checksum="19466F22CE6A81EE" modified="2014-02-19" version="1">MFYFLKRLCLLCFLLLSLEVSLWSCASHTDLASCLLNHNIKNFTTLPYKEHDQPSSHDYFKILNFSIQNLRFAEPVIPKPIAIVLPGSLEQLQKSVACSRESSMEIRVRCGGHSYEGTSYVADDGTPFVIIDMMNLNHVWVDMETETAWVEGGATLGETYYAISQASNEYGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLVDADQNLLDRETMGEDVFWAIRGGGGGLWGIIYAWKIQLLKVPQVVTSFTVSRTGTKSHVANLVHKWQYVAPNLEDDFYLSCFVGAGLPQAKTKGLSLTLNGFYLGPKTDAISILHHAFPELGVTEEECIEMSWIQSIVFFSGLSDGASVSDLKNRYVQEKEYFKAKSDYVKNHIPLVGIETALDILEKEPKGYVILDAYGGKMHNISNDAIAFPHRRGNLFTIQYLIYWKEADKEKSSDYVDWIRGFYDAMSPFVSSAPRAAYINYMDFDLGVRKRIRSYGDVEDGVENARDWGEKYFLSNYDRLVRVKTMVDPNNVFTNEQGIPPLSLASPSFKAQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDL6</accession>
    <name>V7BDL6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G0368001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDL6"/>
    <dbReference type="STRING" id="3885.V7BDL6"/>
    <dbReference type="Gramene" id="ESW15013">
        <property type="protein sequence ID" value="ESW15013"/>
        <property type="gene ID" value="PHAVU_007G0368001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0061">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1658013at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW15013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="103" mass="11802" checksum="AEAA4005A699A9AE" modified="2014-02-19" version="1" fragment="single">ALERISFGKSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLEIPIDDIDNNTSLLKLEEINSEEVDQTLEAPPVVQVDSNQPPESPRVDFVGPFVLEGAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE35</accession>
    <name>V7BE35_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">WAT1-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G128600g</name>
    </gene>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.</text>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_007G128600g"/>
    </dbReference>
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        <property type="component" value="Chromosome 7"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:transmembrane transporter activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="EamA_dom"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="WAT1-related"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="Multidrug resistance efflux transporter EmrE"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
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            <end position="129"/>
        </location>
    </feature>
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        <location>
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        </location>
    </feature>
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            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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        </location>
    </feature>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="309"/>
            <end position="329"/>
        </location>
    </feature>
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        <location>
            <begin position="19"/>
            <end position="159"/>
        </location>
    </feature>
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        <location>
            <begin position="189"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <sequence length="355" mass="39843" checksum="E2256A7EE65EC9FD" modified="2014-02-19" version="1">MKQQKRASHVHIYRELKPHLFMVIVQVGYTFLYFITEASFNHGMSPHVYVTYRHIVATVVMFPFAYFLERDARPKLTFALLMEFFLLSLLGVSVSLNMYFASLNYTNPTFVASMVNTVASLTFIVAVAIRFEVVDVRNPRGIAKVIGTMISLAGVLVMTLYKGPIMRNLWRPLIHIPGKSAAITEDWLKGSILTVSSCVTWSLWYIMQASTLKRYPAQISLTTWMCFVGAAQSAVFTLIVEHDSSAWTMGLNIDLWSTIYGGVVVSGFIIYIQLWCTEKRGPVFVTMFNPISTILVAVLAYFVLGEKLYLGSIIGSLIVIIGLYLLLWGKEGDKVVCMKTTEKSQCSSADPECII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
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    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
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    </evidence>
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        <source>
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    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="Google" id="ProtNLM"/>
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    </evidence>
    <sequence length="272" mass="30300" checksum="43EC20ADE01BB133" modified="2014-02-19" version="1">MSMASESSWVGRKPVKRIGGMSDALSIAADLGFSMSPSPSQEGLQNSSPTTGEKGEDLIRVLRELTTVQRKIADLQVELQGRKDDKNVAHLTHVSEMEKKIETLDRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQNFKEPPSVWGEMLRPIPVALASCTRFFEAMSATRESFATLQKLRVGHFDSSLPRTPAGDPSQRVSGVPDCLTPPPWKTEANYDDLGIRNHRRQHADQVEDVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGK8</accession>
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        </submittedName>
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    <reference evidence="2" key="1">
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            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
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                <person name="Chavarro C."/>
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                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
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                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
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                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_007G199300g"/>
    </dbReference>
    <dbReference type="OMA" id="FSCMLAN"/>
    <dbReference type="OrthoDB" id="674685at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="241" mass="26988" checksum="173680A1802644C2" modified="2014-02-19" version="1">MQRKFCSLVKDKGNGSAGGSDNGGARFTCGTQFSRKSVGSAFSCMLANKGPPGKHASKLKKKKAFGDSGNGKAWHTNGKASCGEEPVEVAFSQLLALEETDRSGEGKQNSKDRQDVKMKLPLLSFLYKKKGWNNFTKARFSIDENGDSKNVIRLGQARRKLNLRHLFRIPSKILLFRLKLKLTKFQIKKKATEQFEQDAGDDENEDRELCKKRILMGGRCRPLSSPGYKEMYSNSWTRAQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH52</accession>
    <name>V7BH52_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">cellulose synthase (UDP-forming)</fullName>
            <ecNumber evidence="6">2.4.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_007G190300g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>[(1-&gt;4)-beta-D-glucosyl](n) + UDP-alpha-D-glucose = [(1-&gt;4)-beta-D-glucosyl](n+1) + UDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19929"/>
            <dbReference type="Rhea" id="RHEA-COMP:10033"/>
            <dbReference type="Rhea" id="RHEA-COMP:10034"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18246"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.4.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Glycan metabolism; plant cellulose biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.12" evidence="6"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH52"/>
    <dbReference type="SMR" id="V7BH52"/>
    <dbReference type="STRING" id="3885.V7BH52"/>
    <dbReference type="Gramene" id="ESW16855">
        <property type="protein sequence ID" value="ESW16855"/>
        <property type="gene ID" value="PHAVU_007G190300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPUN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GYCPLWY"/>
    <dbReference type="OrthoDB" id="2161379at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000009">
        <property type="entry name" value="Cellulose synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="14" id="KW-0135">Cellulose biosynthesis</keyword>
    <keyword evidence="8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="17" id="KW-0464">Manganese</keyword>
    <keyword evidence="16 24" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 24" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 24" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="13" id="KW-0862">Zinc</keyword>
    <keyword evidence="12" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="122"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="663"/>
            <end position="684"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="696"/>
            <end position="720"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="732"/>
            <end position="753"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="774"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="815"/>
            <end position="833"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="845"/>
            <end position="865"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="23">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="23">
        <location>
            <begin position="482"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="23">
        <location>
            <begin position="482"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="23">
        <location>
            <begin position="493"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="active site" evidence="20">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <feature type="active site" evidence="20">
        <location>
            <position position="586"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="382"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00048682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW16855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="884" mass="100646" checksum="2EB723D84758AD15" modified="2014-02-19" version="1">MVMSAASATGSHSRNGFRFSDQQNGDYNQHNDGQAFSVAGSEDFEAQKAFYSNEEKRKDKRNLMSNDQEDENLLAEARQPLWRKVPIASSLINPYRIVILLRLVILVFFFHLRITTPVHDALALWIISVVCEIWLALSWIVDQLPKWFPVTRETYLERLSLRFEREEVPNLLAPVDIFVTTADPFKEPPIITANTVLSVLSVDYPVEKVTCYVSDDSASMLLFDTLSETAEFARIWVPFCKMYNIETRAPEFYFSEKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKALKKPEEGWVMQDGNPWPGSNMDDHPGIIQVRLGSTGALDKEGKELPRLVYVSREKRPGYQHHRKAGAMNTLVRVSAVLSNAPFALNLDCDQYINNSKVLRESMCFLMDPQLGKKFCYVQFPKRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPLYVGTGCVFNRQALYGFDPLSDKRPKMKSCCWPSSSSCCSSDSESSSDDESDQELVDFDDEEEEEEELSFMSLKSLEKRFGQSPVFIASVLMEDGGLPKGTNTRVLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYDYSGKLKWLQRLAYTNSIVYPFTSIPLLIYCTIPAVCLLTGKFILPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGVNTNFSVRAKSAHDTSFAQFYLFKWTALLIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGKQNRTPTIVILWSILVAIIFSMIWVRIDIFLPKQTGPALRQCGIRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHL6</accession>
    <name>V7BHL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">START domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G117200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHL6"/>
    <dbReference type="SMR" id="V7BHL6"/>
    <dbReference type="STRING" id="3885.V7BHL6"/>
    <dbReference type="Gramene" id="ESW15956">
        <property type="protein sequence ID" value="ESW15956"/>
        <property type="gene ID" value="PHAVU_007G117200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2761">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RPKWAYL"/>
    <dbReference type="OrthoDB" id="1295045at2759"/>
    <dbReference type="PhylomeDB" id="V7BHL6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08870">
        <property type="entry name" value="START_STARD2_7-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.530.20:FF:000006">
        <property type="entry name" value="StAR-related lipid transfer protein 7, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002913">
        <property type="entry name" value="START_lipid-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051213">
        <property type="entry name" value="START_lipid_transfer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19308">
        <property type="entry name" value="PHOSPHATIDYLCHOLINE TRANSFER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19308:SF58">
        <property type="entry name" value="POLYKETIDE CYCLASE_DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01852">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55961">
        <property type="entry name" value="Bet v1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50848">
        <property type="entry name" value="START"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="START" evidence="3">
        <location>
            <begin position="113"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="44856" checksum="6D7D2357DD22E4C2" modified="2014-02-19" version="1">MPIPLFPTPTIIIPIITDLAVFITPLWIAVIVGVILGWAWKPKWAFDPKHALQKLRPPRSPNPPDHTAFTYSTTSTSAGSSSAREKDASGNAVVTEHDLLHLWKLVEEKDGGPAWIQMMDRSTPTMSYQAWRRDPETGPPQYRSRTVFEDASPELVRDFFWDDEFRLNWDDMLIHASTIQECALTGAMMVHWVRKFPFFCSDREYIIGRRIWDAAQIYYCVTKGVPCPSMPRHNKPKRVDLFYSSWCIRAVKSRKDGQLTSCEILLFHHEDMGIPWEIAKLGVRQGMWGAVKKFDPGLRTYEKQRASGVPLSPCARAANINTKISVDYLRSLENTTTDLLEIENQDSSDKPVGRNIPKLLIVGGAIALACTLDQGLLTKAVIFGVARRFAKMGRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHX8</accession>
    <name>V7BHX8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G212300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHX8"/>
    <dbReference type="SMR" id="V7BHX8"/>
    <dbReference type="STRING" id="3885.V7BHX8"/>
    <dbReference type="Gramene" id="ESW17120">
        <property type="protein sequence ID" value="ESW17120"/>
        <property type="gene ID" value="PHAVU_007G212300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSSS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGLITWT"/>
    <dbReference type="OrthoDB" id="205546at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36774">
        <property type="entry name" value="INSULIN-INDUCED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36774:SF1">
        <property type="entry name" value="INSULIN-INDUCED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="253" mass="28744" checksum="FD1032BE98821E48" modified="2014-02-19" version="1">MQCLLASASSSSVHAYSLLRHSYPVHRTRKLVLLKPQCGQREPSPRNLRTSWPSISLKLFGTGFLLGPLLDGLHSRVNLLVYDSGAIHIGPLHTNIWVPFLLGLFYSSVGLLQLYLDQKLFNKVQEASLPKTIVSFILLALFIEVSAELYKGGIADNVEAYILFAGAEFMWFFLDRTWLGFTLACIVGLACPLAEVPIMKFFHLWYYPKPNIEIFGQGLVTWTLTCYFVYTPFLINLSRWLRTVYDPRTDEST</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ90</accession>
    <name>V7BJ90_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G006400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ90"/>
    <dbReference type="SMR" id="V7BJ90"/>
    <dbReference type="STRING" id="3885.V7BJ90"/>
    <dbReference type="Gramene" id="ESW18017">
        <property type="protein sequence ID" value="ESW18017"/>
        <property type="gene ID" value="PHAVU_006G006400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3KV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVEYPPE"/>
    <dbReference type="OrthoDB" id="18175at2759"/>
    <dbReference type="PhylomeDB" id="V7BJ90"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033617">
        <property type="term" value="P:mitochondrial respiratory chain complex IV assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018625">
        <property type="entry name" value="Pet100"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35700:SF3">
        <property type="entry name" value="GENOME ASSEMBLY, CHROMOSOME: A08"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35700">
        <property type="entry name" value="OS07G0181800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09803">
        <property type="entry name" value="Pet100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="13"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8680" checksum="C64932E721AC5CA0" modified="2014-02-19" version="1">MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNPGNLRKFMGNRSYIEYPPEAERPPSPEEIREMAREMARRRNSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJB9</accession>
    <name>V7BJB9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Non-specific phospholipase C2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G014100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial phospholipase C family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJB9"/>
    <dbReference type="SMR" id="V7BJB9"/>
    <dbReference type="STRING" id="3885.V7BJB9"/>
    <dbReference type="Gramene" id="ESW18114">
        <property type="protein sequence ID" value="ESW18114"/>
        <property type="gene ID" value="PHAVU_006G014100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPJ0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YNISWAY"/>
    <dbReference type="OrthoDB" id="5135119at2759"/>
    <dbReference type="PhylomeDB" id="V7BJB9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042578">
        <property type="term" value="F:phosphoric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009395">
        <property type="term" value="P:phospholipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.720.10:FF:000011">
        <property type="entry name" value="Non-specific phospholipase C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.720.10:FF:000028">
        <property type="entry name" value="Non-specific phospholipase C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="entry name" value="Alkaline Phosphatase, subunit A"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007312">
        <property type="entry name" value="Phosphoesterase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31956:SF26">
        <property type="entry name" value="NON-SPECIFIC PHOSPHOLIPASE C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31956">
        <property type="entry name" value="NON-SPECIFIC PHOSPHOLIPASE C4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04185">
        <property type="entry name" value="Phosphoesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="Alkaline phosphatase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754610" description="Non-specific phospholipase C2" evidence="7">
        <location>
            <begin position="25"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="412"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW18114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="520" mass="58527" checksum="1945542AA566D3AF" modified="2014-02-19" version="1">MCFQRFNHFPLFLTFLLLSHHATPSPIKTVVVLVMENRSFDHMLGWMKRLNPAINGVTGSESNALSVTDPNSKRFFFKDQAHYVDPDPGHSFQAIREQIFGSNDTSTYPPPMNGFAQQAFSMDNTSHMSQNVMNGFIPDLVPVYKTLVSEFAVFDRWFASVPASTQPNRLFVHSATSGGATSNVAAKLAAGYPQQTIFDNVHEAGLDFGIYYQNIPATLFYRNLRKLKYLLKFHLYDLSFKLHAKEGKLPSYTVVEQRYMDTKVLPANDDHPSHDVYQGQMFVKEVYETLRASPQWNETLFLITYDEHGGFYDHVPTPARGVPSPDGIVGPEPFNFTFNRLGVRVPTIAISPWIQKGTVVHGPNGSPTSTSEYEHSSISATVKKLFNLPSFLTKRDAWAGTFEGIVQTRTEPRTDCPEKLPTPVKIREGGPNEDAQMSEFQQELIQLAAVLKGDNILTSFPGKIGKDMTVKQGKYYMDDAVRRFFEAGRYAKKMGVNEEHIVQMKPSLTTRSSKSPNRNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKZ2</accession>
    <name>V7BKZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 14">Pyruvate kinase</fullName>
            <ecNumber evidence="4 14">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G224500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="13 14">
            <text>pyruvate + ATP = phosphoenolpyruvate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 14">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the pyruvate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 14"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKZ2"/>
    <dbReference type="SMR" id="V7BKZ2"/>
    <dbReference type="STRING" id="3885.V7BKZ2"/>
    <dbReference type="Gramene" id="ESW17261">
        <property type="protein sequence ID" value="ESW17261"/>
        <property type="gene ID" value="PHAVU_007G224500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2323">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRGLYPM"/>
    <dbReference type="OrthoDB" id="108365at2759"/>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.33.10:FF:000004">
        <property type="entry name" value="Pyruvate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1380.20:FF:000006">
        <property type="entry name" value="Pyruvate kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="entry name" value="Phosphoenolpyruvate-binding domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.20">
        <property type="entry name" value="Pyruvate kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015795">
        <property type="entry name" value="Pyrv_Knase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036918">
        <property type="entry name" value="Pyrv_Knase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01064">
        <property type="entry name" value="pyruv_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PYRUVATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02887">
        <property type="entry name" value="PK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="Phosphoenolpyruvate/pyruvate domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="PK beta-barrel domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52935">
        <property type="entry name" value="PK C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 14" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate kinase barrel" evidence="15">
        <location>
            <begin position="30"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="domain" description="Pyruvate kinase C-terminal" evidence="16">
        <location>
            <begin position="395"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00048152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW17261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="527" mass="57769" checksum="D5321D8EFFB4167B" modified="2014-02-19" version="1">MPSSHLLLEEPIRMVSILEPSKQSFFPAMTKIVGTLGPKSRSVETISSCLKAGMSVARFDFSWHDPEYHQETLENLKVAIKSTKKLCAVMLDTVGAEMQVVNKSEKAISLEANGQVVLTPDRGHEASSEILPINFDGLAKAVKKGDTIFIGQYLFTGSETTSVWLEVTEVKEQDVVCIIKNSATLAGALFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDISQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTENLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICSEAEKVFNQDLYFKKTVKYVGEPMSHLESIASSAVRAAIKVKASIIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLLVRGLFPMLADPRHPAESTSATNESILKVALDHGKALGVIKSHDRVVVCQKLGDASVVKIIELED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMY5</accession>
    <name>V7BMY5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G117100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMY5"/>
    <dbReference type="Gramene" id="ESW19349">
        <property type="protein sequence ID" value="ESW19349"/>
        <property type="gene ID" value="PHAVU_006G117100g"/>
    </dbReference>
    <dbReference type="OMA" id="HTNKANA"/>
    <dbReference type="OrthoDB" id="1365832at2759"/>
    <dbReference type="PhylomeDB" id="V7BMY5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="66" mass="7330" checksum="A67A9E9EDF19119E" modified="2014-02-19" version="1">MEESMGFVGGEAQKSHPKMPSSSFPIPLPGRNRKFPRYGYHWAQRAMKGHTVGNANEATEKATLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN60</accession>
    <name>V7BN60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bromo domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G045600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN60"/>
    <dbReference type="SMR" id="V7BN60"/>
    <dbReference type="STRING" id="3885.V7BN60"/>
    <dbReference type="Gramene" id="ESW18490">
        <property type="protein sequence ID" value="ESW18490"/>
        <property type="gene ID" value="PHAVU_006G045600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0955">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SRFQGQI"/>
    <dbReference type="OrthoDB" id="21449at2759"/>
    <dbReference type="PhylomeDB" id="V7BN60"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
        <property type="entry name" value="Bromodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
        <property type="entry name" value="Bromodomain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051831">
        <property type="entry name" value="Bromodomain_contain_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018359">
        <property type="entry name" value="Bromodomain_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22881">
        <property type="entry name" value="BROMODOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22881:SF43">
        <property type="entry name" value="DNA-BINDING BROMODOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00503">
        <property type="entry name" value="BROMODOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
        <property type="entry name" value="BROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00633">
        <property type="entry name" value="BROMODOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0103">Bromodomain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bromo" evidence="4">
        <location>
            <begin position="171"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="266"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="537"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="794"/>
            <end position="845"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="13"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="49"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="77"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="98"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="560"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="612"/>
            <end position="635"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="826"/>
            <end position="839"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="845" mass="93562" checksum="181E0EE453404D6B" modified="2014-02-19" version="1">MVQIARRKKGRPSKADLARRSGESPAAESPSDLRRSHRRRSVRYNIIDYDGDYLDDEEDERRREKKKLKLMAKLNQDGEEEREEENDTTRSGTCADAPAEEYEEDENEQEEEHEHEQEEEQEEDEDCVVKGRKVESKGLHSISVSGTPVILQSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIDHPMDFATVRKKLAAESYTTLEQFESDILLICSNAMQYNAAETIYHKQARSIQELGRKKFEKLRIGFERSQMEQKSEQKAGSNYLVKKQPKKPLVRASQEPGGSDFSSGATLATNADIQPTSHPMQGGRCERPGNIDGILEANAFWIDANQEKAEDFLSGKGLHSNKWGRKSVVLDESRRASYNISSQPIGRSESIFMTFDSEMKQLVAVGLHAEYSYARSLARFSASLGPIAWKIASHRIEQALPPGFKYGRGWVGEYEQLPTPILMVNNQVQKATSLVMKLHSTIELTKADKNCKNVEPSIEHPVHGQRLEGKYPLMPDSEGKPFFGSAGVRLCAPANILNQEQNKQSRKIGKPEDKGLKQDGLNSLSSSKQNNKGLGAKLTSNTPAAESKPTEMVTGNVFKQPDVSGELPNGKVKNTSLNRQVTGPSPESTSNQSSRAGPVVHGKELGVCDPVQLMGMFAEMAQKQHNSNHLLVDTPPVTLSSPSGQRDDLGNASAAAARAWMSVGAGGFRQGPDNSSSPKNQISADSLYNSTREFHQHISRIRGEFPSAGMPFQPFQALAPQSSHTGTVSQFPNRPMVFPLLASADQSRFQIQSPWRGLSPRSQSRQKQETFPPDLNIGFQPPGSPAKQSSGVLVDSQQPDLALQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNK5</accession>
    <name>V7BNK5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Endonuclease/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G136900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNK5"/>
    <dbReference type="STRING" id="3885.V7BNK5"/>
    <dbReference type="Gramene" id="ESW19579">
        <property type="protein sequence ID" value="ESW19579"/>
        <property type="gene ID" value="PHAVU_006G136900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2338">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="428734at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000175">
        <property type="term" value="F:3'-5'-RNA exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050410">
        <property type="entry name" value="CCR4/nocturin_mRNA_transcr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121">
        <property type="entry name" value="CARBON CATABOLITE REPRESSOR PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12121:SF74">
        <property type="entry name" value="CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="146" mass="16636" checksum="797302924547A7FA" modified="2014-02-19" version="1">MCCSTQIVVTLNWAMYYEILLDKVYKLSQEWGNIHVIIAGDLNSVPKSAIYKFLSSSKIMEEPKGYEEMRNIFRSQIPDDASISMTLSRQLLYRWSVEELRLATGAKGITYLQHLLKLRSAIVVFLYAVLICQIKLLPLAISATSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNQ1</accession>
    <name>V7BNQ1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Transcriptional adapter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_006G140900g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="18">cv. G19833</strain>
        </source>
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        </subcellularLocation>
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        </location>
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            <end position="35"/>
        </location>
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            <end position="237"/>
        </location>
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            <end position="441"/>
        </location>
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    <feature type="compositionally biased region" description="Polar residues" evidence="11">
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        </location>
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    </evidence>
    <sequence length="560" mass="62441" checksum="4ED18EC296EE3387" modified="2014-02-19" version="1">MGRSRGNFHHADEDPNQRSRRKKNAASGENSESGAAGQGAGEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPFSPSRAKVEDSHKAGSTNRLSSNLNSELDSGPSGNTHSAAGANQKASHARGKGGPGIIKMEDSQIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSEEERELKLRVLRLYSKRLDERKRRKDFILERNLLYPNPLEKDLTPEEKAICRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARIAGCRNSAEADRYISSKRKREAEENVRRTRTKESAQVGPSNQGIPNALTSPDSAGKDTSARPAGPATSSSVNEMDVIGYSGADLLCEAEKRLCCELRLSPAMYLKMQEQLSLQILAGTVSAKSDAHKLFNKLDAIKIDRVYDMLIKKGIGLP</sequence>
</entry>
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    <accession>V7BQQ0</accession>
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            <taxon>Spermatophyta</taxon>
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            <taxon>eudicotyledons</taxon>
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            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
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            <taxon>Fabaceae</taxon>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
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                <person name="Song Q."/>
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                <person name="Blair M."/>
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                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
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                <person name="Hyten D.L."/>
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                <person name="Kelly J.D."/>
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                <person name="Miklas P.N."/>
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                <person name="Thareau V."/>
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                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="OS08G0113900 PROTEIN"/>
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    </dbReference>
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    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="105" mass="11762" checksum="2A5C0D46993CAC3F" modified="2014-02-19" version="1">MGSNEGDENGGSNKSRWLTKPSCWCVLFMSLLVSIAGGLVLGWWLHKYHPSNTQLWMVPFGFLLFLTPLIICLALVLPDLCVATARIDQEQPSTTQDHSFSRPNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSG8</accession>
    <name>V7BSG8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription repressor</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Ovate family protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G171800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Transcriptional repressor that regulates multiple aspects of plant growth and development.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSG8"/>
    <dbReference type="STRING" id="3885.V7BSG8"/>
    <dbReference type="Gramene" id="ESW19990">
        <property type="protein sequence ID" value="ESW19990"/>
        <property type="gene ID" value="PHAVU_006G171800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQT7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YFCEIGD"/>
    <dbReference type="OrthoDB" id="1928390at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038933">
        <property type="entry name" value="Ovate"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006458">
        <property type="entry name" value="Ovate_C"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01568">
        <property type="entry name" value="A_thal_3678"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33057:SF205">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33057">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR OFP7-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04844">
        <property type="entry name" value="Ovate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51754">
        <property type="entry name" value="OVATE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0678">Repressor</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="OVATE" evidence="8">
        <location>
            <begin position="329"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="231"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="10"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="405" mass="47049" checksum="AFF44CF9176CE30D" modified="2014-02-19" version="1">MKWGGRKHSLTSSSSSGSSFISHASPFSWLFKFKNMRINSEPSAAKRKQKAKPSGSPKYFCEIGDRCCVKDDGDFCRQPLNEESCEDKKNKDIDESVFPSLSCLGGTRDAKKHGKKGTLELKERDIGQGEERKWLNDGRVSKEMDEYNREKEYENLRRRFESKAQKAFQDQLLTLERDMEELKFGSSKAVEKDVLQFESPRTICTPRTHAFSSSAFSRNPNLGDIIENFEKTEKQPHKKMSSVRQNLKQTEEMKVKTNRKKQSHQLSREHQRRKPKPSSRVQIRSPRMVSKVEICKIKALEDMKKAKLKMKKEREEIVEEIPGLESFAVIKSSIDPKQDFRDSMIEMIIENQIIDPEEMEDLLACYLTLNADEYHDLIIKVFRKVWFDMSQGILGIKLNMQCGYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSH2</accession>
    <name>V7BSH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ADP-ribosylation factor GTPase-activating protein AGD11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G028800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSH2"/>
    <dbReference type="SMR" id="V7BSH2"/>
    <dbReference type="Gramene" id="ESW20952">
        <property type="protein sequence ID" value="ESW20952"/>
        <property type="gene ID" value="PHAVU_005G028800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0703">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1030">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KQECSTE"/>
    <dbReference type="OrthoDB" id="73919at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005543">
        <property type="term" value="F:phospholipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08204">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04038">
        <property type="entry name" value="C2_ArfGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.150:FF:000190">
        <property type="entry name" value="ADP-ribosylation factor GTPase-activating protein AGD12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.220.150:FF:000009">
        <property type="entry name" value="stromal membrane-associated protein 1 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.150">
        <property type="entry name" value="Arf GTPase activating protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044518">
        <property type="entry name" value="ARF_GAP_AGD11/12/13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001164">
        <property type="entry name" value="ArfGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038508">
        <property type="entry name" value="ArfGAP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46220">
        <property type="entry name" value="ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46220:SF15">
        <property type="entry name" value="CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01412">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00405">
        <property type="entry name" value="REVINTRACTNG"/>
    </dbReference>
    <dbReference type="SMART" id="SM00105">
        <property type="entry name" value="ArfGap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="ArfGap/RecO-like zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50115">
        <property type="entry name" value="ARFGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Arf-GAP" evidence="8">
        <location>
            <begin position="49"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="7">
        <location>
            <begin position="228"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="401" mass="44919" checksum="D84FD1FC0A91FA8D" modified="2014-02-19" version="1">MEMSVQPENPNTNGISGSGSCLYDLFCSENPSFNAHVAKEQWMSSVGPQKRLDSLMRQAGNRYCADCGALEPKWVSLNIGVFICIKCSGIHRSLGVHISKVLSLNLDEWTDEQVDALVKLGGNTLVNKKYEVHLPINNIRKPRPDSSIEERSDFIRRKYEYLQFSDTEDNMSCPFIPPPHSGSSSDSQISYSRNPFTREKKHCDNKPPNRHFIGRTFRNSRGRKDCHDFRAKKTNSLAGMTEFVGLIKVNVVKGTNLAVRDVMSSDPYVTISLGHQSVKTRVIKNNLNPIWNESLMLSIPDCIPPLKIIVLDKDTFSTDDFMGEAEIDIQPLVSAAMAYEKSSVNESTEVGKWIASGDNSLLKDGIISLEDGQIKQEISLRLQHVERGVLEIELECVPLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSI2</accession>
    <name>V7BSI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit beta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G029500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSI2"/>
    <dbReference type="SMR" id="V7BSI2"/>
    <dbReference type="STRING" id="3885.V7BSI2"/>
    <dbReference type="Gramene" id="ESW20962">
        <property type="protein sequence ID" value="ESW20962"/>
        <property type="gene ID" value="PHAVU_005G029500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1465">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCLNDMR"/>
    <dbReference type="OrthoDB" id="269919at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005851">
        <property type="term" value="C:eukaryotic translation initiation factor 2B complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005085">
        <property type="term" value="F:guanyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10470:FF:000005">
        <property type="entry name" value="translation initiation factor eIF-2B subunit beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="entry name" value="Translation initiation factor eif-2b, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051855">
        <property type="entry name" value="eIF2B_beta_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45859">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45859:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="142"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="159"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW20962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="414" mass="44767" checksum="EA1C02A5CB0F482A" modified="2014-02-19" version="1">MPDVQALNEFVNLLKKRKIEGSQATAKLTAELLRSVISHQRVPHTNQATYLINAVRAVGEQIIDANPIELSVGNIVRRVLHIIREEDLSLVTDAMAGFGMSATSDDEDDVERDDHPALSAVVVAAAARSTLRPPSLQTLLEDVTDSAAIPPTPSSTGDSDGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFKVVVAEGAPRYRGHLLAKELAARGLQSTVIADSACFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAAHRHAVPFVVLAGSHKLCPLYPHNPHVLLNELRSPSELLDFGEFSDLMDSATSLGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTM9</accession>
    <name>V7BTM9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Putative plant transposon protein domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G064000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTM9"/>
    <dbReference type="Gramene" id="ESW21357">
        <property type="protein sequence ID" value="ESW21357"/>
        <property type="gene ID" value="PHAVU_005G064000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436991at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046796">
        <property type="entry name" value="Transposase_32_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20167">
        <property type="entry name" value="Transposase_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative plant transposon protein" evidence="1">
        <location>
            <begin position="2"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="34181" checksum="C30C1A39E8E84EEE" modified="2014-02-19" version="1">MRLVEPLGKYDYEVVHEFYANDWIGGVGTQEMQDSINSFSGDPLQLRGVDDYSYHQLRAKTYGFNEDIVAREICLANHSYEITPGGKPWRILRKHMKTLSQVWIILMLANIVPIGHMSDLNIPRCHLLCFLLKDDYFVDVAKIIGHEIYNFFRLEVSQNNEKANGFLGFPALIIVLYAVHGVEVNSSIKIKPPIDLKFIVNNCNATEEQAPEAGDVPIHHSPIHHPGSSSSSREYRILEQMQQMQLEQRATWELIQMQESANHRGIFVVYVAWPGTCSIIQGVNPVNEPGPSTTVDEDFNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTR4</accession>
    <name>V7BTR4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G168900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTR4"/>
    <dbReference type="STRING" id="3885.V7BTR4"/>
    <dbReference type="Gramene" id="ESW19956">
        <property type="protein sequence ID" value="ESW19956"/>
        <property type="gene ID" value="PHAVU_006G168900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXIJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYAWREL"/>
    <dbReference type="OrthoDB" id="641593at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36806">
        <property type="entry name" value="ADENINE PHOSPHORIBOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="218" mass="24287" checksum="F504D5AC01F67B62" modified="2014-02-19" version="1">MIFSLPPNPMAAVRSNSITVFFVAFILFTTAPSPSQCISFSSYFRYRELFSLSHSLLIGVANLRAARGDVVGAERARAIANSLDRGTVFGFVKLLWTWSWRDLSFTDLYGVVSDTKELLRGLTELTRLESVAERSAWVSRNYQSVLTVSKSLSSKLLKAFGQSGVMREMGETFQKEVVEGGLIRDCLQLGNNDLKALIQVVKDLLLQFFPVQGKDSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUM2</accession>
    <name>V7BUM2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 17">Histone acetyltransferase</fullName>
            <ecNumber evidence="3 17">2.3.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_005G011500g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15 17">
            <text>L-lysyl-[protein] + acetyl-CoA = N(6)-acetyl-L-lysyl-[protein] + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:45948"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10731"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:61930"/>
            <dbReference type="EC" id="2.3.1.48"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 17">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 17">Belongs to the MYST (SAS/MOZ) family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.48" evidence="3 17"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUM2"/>
    <dbReference type="SMR" id="V7BUM2"/>
    <dbReference type="STRING" id="3885.V7BUM2"/>
    <dbReference type="Gramene" id="ESW20750">
        <property type="protein sequence ID" value="ESW20750"/>
        <property type="gene ID" value="PHAVU_005G011500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2747">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRLMINP"/>
    <dbReference type="OrthoDB" id="787137at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004402">
        <property type="term" value="F:histone acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003712">
        <property type="term" value="F:transcription coregulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010224">
        <property type="term" value="P:response to UV-B"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
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        <property type="entry name" value="CBD_MOF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="NAT_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Histone acetyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Histone acetyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Histone acetyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.630.30:FF:000002">
        <property type="entry name" value="Histone acetyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.60.60">
        <property type="entry name" value="N-acetyl transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016197">
        <property type="entry name" value="Chromo-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000953">
        <property type="entry name" value="Chromo/chromo_shadow_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002717">
        <property type="entry name" value="HAT_MYST-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050603">
        <property type="entry name" value="MYST_HAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025995">
        <property type="entry name" value="Tudor-knot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040706">
        <property type="entry name" value="Zf-MYST"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10615">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10615:SF161">
        <property type="entry name" value="HISTONE ACETYLTRANSFERASE KAT7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01853">
        <property type="entry name" value="MOZ_SAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11717">
        <property type="entry name" value="Tudor-knot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17772">
        <property type="entry name" value="zf-MYST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00298">
        <property type="entry name" value="CHROMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54160">
        <property type="entry name" value="Chromo domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51726">
        <property type="entry name" value="MYST_HAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0007">Acetylation</keyword>
    <keyword evidence="11" id="KW-0010">Activator</keyword>
    <keyword evidence="14" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13 17" id="KW-0539">Nucleus</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0804">Transcription</keyword>
    <keyword evidence="10" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYST-type HAT" evidence="19">
        <location>
            <begin position="154"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="18">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="18">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="16">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00048017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR602717-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU361211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW20750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="430" mass="49716" checksum="BCCDDC8318D3253A" modified="2014-02-19" version="1">MGSLETPTGSGPSAGNGKSTSVDAAEAPPEPDMSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRKVSNAIPGDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGASGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLRLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUZ3</accession>
    <name>V7BUZ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">BRISC and BRCA1-A complex member 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">BRCA1-A complex subunit BRE</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">BRCA1/BRCA2-containing complex subunit 45</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_005G022200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the BABAM2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUZ3"/>
    <dbReference type="SMR" id="V7BUZ3"/>
    <dbReference type="STRING" id="3885.V7BUZ3"/>
    <dbReference type="Gramene" id="ESW20875">
        <property type="protein sequence ID" value="ESW20875"/>
        <property type="gene ID" value="PHAVU_005G022200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUU0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AGSTWRH"/>
    <dbReference type="OrthoDB" id="538811at2759"/>
    <dbReference type="PhylomeDB" id="V7BUZ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070552">
        <property type="term" value="C:BRISC complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006325">
        <property type="term" value="P:chromatin organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006302">
        <property type="term" value="P:double-strand break repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010358">
        <property type="entry name" value="BRE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15189">
        <property type="entry name" value="BRISC AND BRCA1-A COMPLEX MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15189:SF7">
        <property type="entry name" value="BRISC AND BRCA1-A COMPLEX MEMBER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06113">
        <property type="entry name" value="BRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0053">Apoptosis</keyword>
    <keyword evidence="14" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="11" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-0498">Mitosis</keyword>
    <keyword evidence="13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="10" id="KW-0833">Ubl conjugation pathway</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00025766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00032491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00032630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW20875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="377" mass="43559" checksum="70998C688F4F67B2" modified="2014-02-19" version="1">MAAPPENVPSFIAAQLSHLLSHFRLTLQVEQMWSGDKFNTGPLDRFTLLIPYCLDFIKWDVVFDAESPNAAPDVIFGPEDDRFHPFHMLPSPESNSNCLSDWNHKDPSRLLTLIQFLRDQYVLYQRKRVEEVDDDRLKFEISTILSREGIEMHMSCSAEKLEEVKFAVPLLDMNINKMVSCCPWRYSQKIYLQVEYPVGRKYTSLPSAPRLKLVSSPELKAVFSIDDVKLPPWLDGMCLAEYLPNLEEYLGKQVLDAVSLIEVRRHFIEALAIPFGRPVEADPVFCRKATFLCASGVFTFLVHFLIPTQFPKQQPAFMFQSSQHFNSQMAPLKSRLLSEYPWSPRWEPLLMAERICEFLADEALIFKRQCTEGQLQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVW6</accession>
    <name>V7BVW6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G048100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVW6"/>
    <dbReference type="Gramene" id="ESW21173">
        <property type="protein sequence ID" value="ESW21173"/>
        <property type="gene ID" value="PHAVU_005G048100g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757148" evidence="2">
        <location>
            <begin position="20"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW21173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="66" mass="7119" checksum="3258EF7483D1EE65" modified="2014-02-19" version="1">MTHSLLCWNLMVCFPQSTTISPKVASHDMPKTTSMPSKSNSKVSTNNLIPSNSISTCLHSPLATTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7BW13</accession>
    <name>V7BW13_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 14">Pectinesterase</fullName>
            <ecNumber evidence="5 14">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_005G012000g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Acts in the modification of cell walls via demethylesterification of cell wall pectin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 14">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n methanol + n H(+)</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 14">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the pectinesterase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="5 14"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BW13"/>
    <dbReference type="SMR" id="V7BW13"/>
    <dbReference type="STRING" id="3885.V7BW13"/>
    <dbReference type="Gramene" id="ESW20756">
        <property type="protein sequence ID" value="ESW20756"/>
        <property type="gene ID" value="PHAVU_005G012000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVDS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRCNISP"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000001">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000001">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31707">
        <property type="entry name" value="PECTINESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 14" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="6" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="28"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="16">
        <location>
            <begin position="64"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="active site" evidence="13">
        <location>
            <position position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00057335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW20756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="570" mass="63452" checksum="9E282CA57B3E3862" modified="2014-02-19" version="1">MSSFKSYGKVDEHEQRVLETRRKTRKRITIIGLSSIVLAGVVFAAVFCILGSTNSSEGANDAHTVTNSVKAVCDVTLYKDSCYSSLGSAVDSRQLQPQELFMLSMKVALSEVSKAADYLSDHGVFNGVAKDNRTKEAFKNCRELLDLAVDHLNSSLTSGEKFSLLEVFDDLETWLSAAGTYQQTCIEGFEDGKEAIKKSVVSYLKNSTQFTSNSLAIITWINKAATTLNLRRLLSLHHQNEAPEWLPSNDRRLLLTEDLRKKADIVVAKDGSGKYKKISDALKHVPNESNKRTVIYVKRGVYYENVRVEKTKWNVMIIGDGMTSTIVSASLNFVDGTPTFSTATFAVFGRNFIARDIGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIRPKLPMHGQQITITAQGKTDPNMNTGISIQNCSISPFGNLSSVQTYLGRPWKNYSTTVYMKSRMEGFVNPKGWLPWTGNSAPNTIFYAEFQNVGPGSSTKNRVKWKGLRTITSEQARKFTIKGFLHGDKWISAAGAPFKSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C043</accession>
    <name>V7C043_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">FHA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G139400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eukaryotic/archaeal RNase P protein component 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C043"/>
    <dbReference type="SMR" id="V7C043"/>
    <dbReference type="STRING" id="3885.V7C043"/>
    <dbReference type="Gramene" id="ESW22256">
        <property type="protein sequence ID" value="ESW22256"/>
        <property type="gene ID" value="PHAVU_005G139400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2363">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LLMDWTR"/>
    <dbReference type="OrthoDB" id="17948at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005655">
        <property type="term" value="C:nucleolar ribonuclease P complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.140:FF:000044">
        <property type="entry name" value="Polymerase/histidinol phosphatase-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.140">
        <property type="entry name" value="Metal-dependent hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002738">
        <property type="entry name" value="RNase_P_p30"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13031:SF0">
        <property type="entry name" value="RIBONUCLEASE P PROTEIN SUBUNIT P30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13031">
        <property type="entry name" value="RIBONUCLEASE P SUBUNIT P30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01876">
        <property type="entry name" value="RNase_P_p30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="PHP domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="FHA" evidence="7">
        <location>
            <begin position="591"/>
            <end position="656"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="463"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="476"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW22256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="714" mass="79134" checksum="87C7C3A5B2F13F3D" modified="2014-02-19" version="1">MGYFDLNIPYPQSSPTTKVAEQSNRTRLAVKAMELGYSGIAYNRTIKGVMSDQHRCSIPPLSLSSLLNVLPSLTLSANLHRSLLGIPLSTPFRQYTRLTVCVDSSCQAQALNSGNPILKTYDLVAVKPFNQTAFDLACQSMEVDIISIDFSAKLPFRLKQPMVKIAMQRGVCFEVSYSDLFAGVHKRRQLIGSAKLLMEWTRGRNIVFSSAAPTVNELRGPCDVANLLSLFGLSKERANAAISENCRILLANSLRKKRFYKEAIRVEVLSTDAASHSKEELLQWDPISSGEGDILLNNVQNSSLVSCKASKTEKAIDFTSVVNSLPSNGFEIKNILPANNVLPACSAKKVNFPPVTEKLNQPAPIPNNFTEQSNILDICCEQVENSLSDAITRSHSLSRDYVVEKTMRSGISDAVNFMEKNIPTALDSAFPNDKVHFLPVAKKINQPTPVPNNLTMQPDRVDVCPKQGESSQPLKQSDDISEKNIRNGTTKALNSMKMEISTKATKLKQRSSIDSNADFIPFEAKSFDSESNPCMSNNTLNIVKSHENEKLSGSSQEARNTVHKVEIFDTIFPAPVPDKHCNDKSSDNNLVEVGKIHEALPNEDLKTSISDTSMEDKQLDKLHDAVEHEKQQLKSYDEMKVEDNSKAANYLNPDVVMKDKEISEVSTAPVGVSGALKLKRRAPRRLPLFSFKRLLNPTAFKKKVKKSKSRTKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0V8</accession>
    <name>V7C0V8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G076600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MCTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0V8"/>
    <dbReference type="SMR" id="V7C0V8"/>
    <dbReference type="STRING" id="3885.V7C0V8"/>
    <dbReference type="Gramene" id="ESW23802">
        <property type="protein sequence ID" value="ESW23802"/>
        <property type="gene ID" value="PHAVU_004G076600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPYX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRTWAHP"/>
    <dbReference type="OrthoDB" id="67700at2759"/>
    <dbReference type="PhylomeDB" id="V7C0V8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd04019">
        <property type="entry name" value="C2C_MCTP_PRT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08379">
        <property type="entry name" value="C2D_MCTP_PRT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.150:FF:000090">
        <property type="entry name" value="C2 domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.150">
        <property type="entry name" value="C2 domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000008">
        <property type="entry name" value="C2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035892">
        <property type="entry name" value="C2_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047258">
        <property type="entry name" value="C2C_MCTP_PRT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047255">
        <property type="entry name" value="C2D_MCTP_PRT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013583">
        <property type="entry name" value="MCTP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047259">
        <property type="entry name" value="QUIRKY-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31425:SF43">
        <property type="entry name" value="MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31425">
        <property type="entry name" value="PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00168">
        <property type="entry name" value="C2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08372">
        <property type="entry name" value="PRT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00239">
        <property type="entry name" value="C2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49562">
        <property type="entry name" value="C2 domain (Calcium/lipid-binding domain, CaLB)"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50004">
        <property type="entry name" value="C2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="811"/>
            <end position="840"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="925"/>
            <end position="954"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="10">
        <location>
            <begin position="1"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="10">
        <location>
            <begin position="241"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="10">
        <location>
            <begin position="394"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="domain" description="C2" evidence="10">
        <location>
            <begin position="553"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="136"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="144"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW23802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="982" mass="111190" checksum="BB1851844567B631" modified="2014-02-19" version="1">MGETSGRKLMVEVCNAKNLMPKDGQGTASAYAIVDFDGQRRRTNTKTRDLNPQWDERLEFIVHDKDSMASETLEVNLYNDKKTGKRSTFLGKVKISGSTFVKSGSETVEYYPLEKRSVFSQIKGELGLKVWYVEDDPPEAENTGEQKTESAPPAEEKPPENPEGEIKKDEAEEKKQDENKPKEEPQEEKAKEEAPAETASPQPEPSNPPIVQTEKLKQANERHHEVVKRVDLNVSDRELCSRSGDRSRGAYDLVDRMPFLFVRVVKTKRAKVENGSSVYANLLIGTHSVKTKSESESKDWDQVFAFDKEGLNSTSLEVSVWSVEEKEGEEKKESCLGTVSFDLQEVPKRVPPDSPLAPQWYSMDSETTPGNELMLAVWIGTQADEAFQEAWLSDSGGLIAETRAKVYLSPKLWYLRLTVIQTQDLQLGSGSEAKFRNPELYVKAQLGAQVFKTGRTSPGSANPTWNEELVLVAAEPFEPFLVITVEDVSNSKTVGHAKVHVATIERRTDDKTEPKSRWFNLSSEDQSRSYTGRIHVRVCLEGGYHVIDEAAHVTSDVRPSAKQLAKPPIGLLEVGIRGAANLLPVKTNDGTQGTTDAFVVAKYGPKWVRTRTITDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRYKRGEDGKPHRDCRLGKVRVRLSTLETNRVYVHSYSLVVLLPGGAKRMGELEIAVRFSCSSWLSLMQAYASPILPRMHYVRPLGPAQQDILRQTAMKIVTARLARSEPALGQEVVQFMLDSDTHMWGMRRSKANWFRVVGCLSRAATLLCWVDRIRTWVHPPTTVLVHMLLAAILLCPYLVLPTVFMYAFLILLLRFRYRQRMPENMDPRMSYVDMVSLDELDEEFDGFPTTRPPEVVKIRYDRVRALAGRVQTLLGDVAAQGERLEALFSWRDPRATGIFALLCLMMSLVFYAVPFRGFVLVAGFYYLRHPRFRDDMPSIPANFFRRLPSFSDQIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1N6</accession>
    <name>V7C1N6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phytocyanin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G032500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">May act as a carbohydrate transporter.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the early nodulin-like (ENODL) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1N6"/>
    <dbReference type="SMR" id="V7C1N6"/>
    <dbReference type="STRING" id="3885.V7C1N6"/>
    <dbReference type="Gramene" id="ESW23268">
        <property type="protein sequence ID" value="ESW23268"/>
        <property type="gene ID" value="PHAVU_004G032500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S139">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYMISFA"/>
    <dbReference type="OrthoDB" id="676939at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000018">
        <property type="entry name" value="Lamin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039391">
        <property type="entry name" value="Phytocyanin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003245">
        <property type="entry name" value="Phytocyanin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021">
        <property type="entry name" value="BLUE COPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021:SF385">
        <property type="entry name" value="PHYTOCYANIN DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02298">
        <property type="entry name" value="Cu_bind_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51485">
        <property type="entry name" value="PHYTOCYANIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Phytocyanin" evidence="7">
        <location>
            <begin position="23"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00035011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00037626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="18514" checksum="CCB11FD6DA9B1863" modified="2014-02-19" version="1">MVVTASMAVMGWLSVVMVVGSPVLHKVGGSKGWINHDVNYTEWSAQEHVYVGDWLMFMFDKRYFNVLEVNKTSYESCIDRDFITNVTRGGRDVVQMTEGRTYYYLSGGGHCFHGMKVAVPVQQHPSLAPSPSMFFSSSLLPSVMCSCIWIIVANVVYLVNLVIRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3G5</accession>
    <name>V7C3G5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF1262 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G048200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3G5"/>
    <dbReference type="STRING" id="3885.V7C3G5"/>
    <dbReference type="Gramene" id="ESW23451">
        <property type="protein sequence ID" value="ESW23451"/>
        <property type="gene ID" value="PHAVU_004G048200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QYPD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NNDREWR"/>
    <dbReference type="OrthoDB" id="1898393at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010683">
        <property type="entry name" value="DUF1262"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31050:SF4">
        <property type="entry name" value="DUF1262 FAMILY PROTEIN (DUF1262)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31050">
        <property type="entry name" value="OS08G0413200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06880">
        <property type="entry name" value="DUF1262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="393" mass="45681" checksum="B2327D4C6D5CCBA9" modified="2014-02-19" version="1">MYVTRPLSMYRRSPSTLSIPPPDGPYSGYLVITDEEAEAEDMCCWRLYRRKNVKKLPFPQDKIFSISHASEYQQTSNTKVWFIPVPDQPLSSNRYYVIRAKGRHKGKAYKCSREGDIVTCCFTDMLNDQRPKPFNLKDLYQIFKIHSHQTGGFFARSITPDGIPPSFLRKKGWRMEISGSYRSCRLSEALGVDAPLREQLPDFSFTISRKRSPPLTVGKWYCPFLFVRDGTRLSHQMKKCMYYSMTLEQRWEEVYSCGREESEGDDGVVVVDVCVEREVAMISGMEATRSGSTDADGFFWFRAYDPYSRRKANVGLSSAIVEHMRWVEEAGGWANGHGREKVVRVREEARNQGEWLRFGCYVLVESFCLRTLEGKLVLRYDFRHIHKVKCKWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3L7</accession>
    <name>V7C3L7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Kinesin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G157000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3L7"/>
    <dbReference type="SMR" id="V7C3L7"/>
    <dbReference type="STRING" id="3885.V7C3L7"/>
    <dbReference type="Gramene" id="ESW24752">
        <property type="protein sequence ID" value="ESW24752"/>
        <property type="gene ID" value="PHAVU_004G157000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0239">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLHLETM"/>
    <dbReference type="OrthoDB" id="3176171at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003777">
        <property type="term" value="F:microtubule motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007018">
        <property type="term" value="P:microtubule-based movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.850.10:FF:000044">
        <property type="entry name" value="p-loop containing nucleoside triphosphate hydrolases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027640">
        <property type="entry name" value="Kinesin-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001752">
        <property type="entry name" value="Kinesin_motor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47972">
        <property type="entry name" value="KINESIN-LIKE PROTEIN KLP-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47972:SF57">
        <property type="entry name" value="P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00225">
        <property type="entry name" value="Kinesin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00380">
        <property type="entry name" value="KINESINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00129">
        <property type="entry name" value="KISc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50067">
        <property type="entry name" value="KINESIN_MOTOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0493">Microtubule</keyword>
    <keyword evidence="6 7" id="KW-0505">Motor protein</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Kinesin motor" evidence="10">
        <location>
            <begin position="750"/>
            <end position="1084"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="178"/>
            <end position="669"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="16"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="833"/>
            <end position="840"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW24752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1143" mass="131132" checksum="4BE6815A85171CF0" modified="2014-02-19" version="1">MNPPSNNHNIEPRVLGNSSSNINGVNSPQRKVLLETKLQRALHSPLMAEPSTTLITQVGHKFPEVFRLKQGSYADLPSTKISELMKSTSLDHLLLQNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAEHLKTQNNIFKAREEKYHSRIRVLEALASGTEEENEIERVKKEEKKVDGLKQTRMNKMEEEKENDMKLVENTKREEKRECDKEVIRYIKELKDKTVEISTLKQKLETMKKTYEVQCSQMEQKAKEENTTDDKEVIRYINELEDKTKEILALKQKLETMEKTCEERCLKLEAKAKEEKMTDDKDEIKVLENKSNEISTLKQKIEKLETLIKSYEVQCSELKAKVEEKNMIDGKDVSRYIKELEDKNMEISTLNKNLENMKKSYEVEYSQLKAKVEEEKGADELKAKAEEEKVADGKEAIRYIKELEDKNKEISALKQELETMKKTYEVQCSQLKAKIEEEKIADGNESIRHIKELEEKNMEISAFKQELETMKKAHEVQCSQLKANAEEEKVVGGKEIIKYTKELEDKNMEISAFKQELETMKEKYEVQCSQLKEKADEEKMVNEKEIMKYTKELEDKIMEISSFKQELETMKKTHEVQCSQWEAKVEDGKEELKQKSQEYENLLEKLRNKVKENETLYESKYQKWFQKEKQIRKDVNFQFSFIQKLKLSWESIKQDALKDQMIYSEECKKLGVNLKSLVEAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHVGENDLVVANPAKQGKEALRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNNASIEDLGVNYRALNDLFSISTNRKSSIVYEIGVQVIEIYNEQVRDLLTHVMFLNDDFLDLHTLGILNHAQPNGLAVPDATMQPVKTTEDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGTDKKSGSSLHGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSTKEGRDVRELMEQVASLKDTILVKDTEIEKLQLLTDLKNVYPSVNSENSETT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4S8</accession>
    <name>V7C4S8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G012100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4S8"/>
    <dbReference type="STRING" id="3885.V7C4S8"/>
    <dbReference type="Gramene" id="ESW25157">
        <property type="protein sequence ID" value="ESW25157"/>
        <property type="gene ID" value="PHAVU_003G012100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXTS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAILWYR"/>
    <dbReference type="OrthoDB" id="1934999at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36000">
        <property type="entry name" value="DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36000:SF2">
        <property type="entry name" value="DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="244" mass="27374" checksum="E2BAE06F801BDDD9" modified="2014-02-19" version="1">MSLPYPSHLLSATASSRFQPLILNNTVSIEPPFLGFKGTPCFVEKQNCCLSVKPFGVSQKRVTKISCSMNMSAQQSDDHGKMKLNQLIDKAQKLWDSSPEPVKIFPWNKALDNLIQLILDLILFVVKYLAVPVFAVTSLSEMSYCAHERKLVLVPLPVLFGVAVAGILKVTALELSPHLKDAEVPWHLIAIAIFFTLIKLPGPYYPYWGRIIIPHFANGVLLRTLWFAILWYRRPKAVKMPGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C671</accession>
    <name>V7C671_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Fructose-1,6-bisphosphatase, cytosolic</fullName>
            <ecNumber evidence="5">3.1.3.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">D-fructose-1,6-bisphosphate 1-phosphohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_004G128900g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the FBPase class 1 family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="5"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C671"/>
    <dbReference type="SMR" id="V7C671"/>
    <dbReference type="STRING" id="3885.V7C671"/>
    <dbReference type="Gramene" id="ESW24416">
        <property type="protein sequence ID" value="ESW24416"/>
        <property type="gene ID" value="PHAVU_004G128900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1458">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNMLAAG"/>
    <dbReference type="OrthoDB" id="10256725at2759"/>
    <dbReference type="PhylomeDB" id="V7C671"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030388">
        <property type="term" value="P:fructose 1,6-bisphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006002">
        <property type="term" value="P:fructose 6-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006000">
        <property type="term" value="P:fructose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005986">
        <property type="term" value="P:sucrose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00354">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.190.80:FF:000001">
        <property type="entry name" value="Fructose-1,6-bisphosphatase class 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.540.10:FF:000008">
        <property type="entry name" value="Fructose-1,6-bisphosphatase, cytosolic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.540.10">
        <property type="entry name" value="Fructose-1,6-Bisphosphatase, subunit A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01855">
        <property type="entry name" value="FBPase_class1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044015">
        <property type="entry name" value="FBPase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033391">
        <property type="entry name" value="FBPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028343">
        <property type="entry name" value="FBPtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020548">
        <property type="entry name" value="Fructose_bisphosphatase_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006778">
        <property type="entry name" value="PRK09293.1-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556:SF41">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="FRUCTOSE-1,6-BISPHOSPHATASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00316">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18913">
        <property type="entry name" value="FBPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500210">
        <property type="entry name" value="FBPtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000904">
        <property type="entry name" value="FBPtase_SBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00115">
        <property type="entry name" value="F16BPHPHTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56655">
        <property type="entry name" value="Carbohydrate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00124">
        <property type="entry name" value="FBPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 13" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class I N-terminal" evidence="14">
        <location>
            <begin position="13"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="Fructose-1-6-bisphosphatase class 1 C-terminal" evidence="15">
        <location>
            <begin position="205"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00040159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF18913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW24416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="341" mass="37056" checksum="9D2CB5F951081937" modified="2014-02-19" version="1">MDHSADALRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCTAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEDAIIVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTVEDVLLPGKKMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLLEQAGGQSFTGKERALDLVPTKLHERSPIFLGSYDDVEEIKALYAAEGKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6L8</accession>
    <name>V7C6L8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G140600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6L8"/>
    <dbReference type="Gramene" id="ESW24556">
        <property type="protein sequence ID" value="ESW24556"/>
        <property type="gene ID" value="PHAVU_004G140600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1431247at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="75" mass="8771" checksum="B5DA18C9A0FDED52" modified="2014-02-19" version="1">MEINAAEAATNRSYEDFEPYCKWLTQEGQVILEINLKGQTVCNASDNLRCRHNNYNITITDLYQIYQMRGEIHTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7C717</accession>
    <name>V7C717_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 19">Peroxidase</fullName>
            <ecNumber evidence="3 19">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_003G078600g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="21" key="2">
        <citation type="submission" date="2013-08" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="21">Pod</tissue>
        </source>
    </reference>
    <reference evidence="23" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="16 19">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16 19">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="16 19">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="19">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="3 19"/>
    <dbReference type="EMBL" id="KF569683">
        <property type="protein sequence ID" value="AHA84293.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C717"/>
    <dbReference type="SMR" id="V7C717"/>
    <dbReference type="STRING" id="3885.V7C717"/>
    <dbReference type="Gramene" id="ESW25939">
        <property type="protein sequence ID" value="ESW25939"/>
        <property type="gene ID" value="PHAVU_003G078600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRC2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RECPQVV"/>
    <dbReference type="OrthoDB" id="2859658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048511">
        <property type="term" value="P:rhythmic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000007">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000010">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF80">
        <property type="entry name" value="PEROXIDASE"/>
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    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
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    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="10" id="KW-0090">Biological rhythms</keyword>
    <keyword evidence="16 19" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 18" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 19" id="KW-0349">Heme</keyword>
    <keyword evidence="13 19" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="9 16 19" id="KW-0408">Iron</keyword>
    <keyword evidence="6 16 19" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 19" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 19 21" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="19" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 19" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5010897057" description="Peroxidase" evidence="19">
        <location>
            <begin position="26"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="32"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="14">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
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        <location>
            <position position="81"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
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        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
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        <location>
            <position position="95"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
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        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="16">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="17">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="42"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="75"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="127"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="18">
        <location>
            <begin position="206"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00023002"/>
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            <dbReference type="ARBA" id="ARBA00023004"/>
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    </evidence>
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        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
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        <source>
            <dbReference type="PROSITE" id="PS50873"/>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="AHA84293.1"/>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW25939.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
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    </evidence>
    <sequence length="335" mass="37588" checksum="A9B97AC69E6239FC" modified="2014-02-19" version="1">MAPKLLTLLAVLSFSALSLLTPSLAEEGQDNGLVMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEEFLPDHNESISSVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDSALNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAIALLSENNPLTGTKGEIRKQCNVANKHHEEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C750</accession>
    <name>V7C750_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G013600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="ESW25173"/>
        <property type="gene ID" value="PHAVU_003G013600g"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW25174"/>
        <property type="gene ID" value="PHAVU_003G013600g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHLAYGM"/>
    <dbReference type="OrthoDB" id="118550at2759"/>
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        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="transcription factor MYB1R1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Transcription factor SRM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
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        <property type="entry name" value="Myb_dom"/>
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        <property type="entry name" value="Myb_dom_plants"/>
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        <property type="entry name" value="SANT_dom"/>
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        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44042:SF66">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="HTH_MYB"/>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="10"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="114"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="115"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="8">
        <location>
            <begin position="123"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
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            <begin position="1"/>
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        </location>
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    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="188"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="27"/>
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        </location>
    </feature>
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            <begin position="73"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="98"/>
            <end position="110"/>
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    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="200"/>
            <end position="221"/>
        </location>
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        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
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    </evidence>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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    </evidence>
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            <dbReference type="PROSITE" id="PS50090"/>
        </source>
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            <dbReference type="PROSITE" id="PS51294"/>
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        <source>
            <dbReference type="EMBL" id="ESW25173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="31436" checksum="63D3D8176993641F" modified="2014-02-19" version="1">MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVEDVSQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGLGNYNSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVLAPQGPITGQTNGSAANSTAKATKQGTPASTGVPGVGIYAAPTIGQPVGGPLVSAVGTPVNLPSPAHMAYGVRAPVAGAVVPGAPVNVIPVTYAMPHTSAPHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7C774</accession>
    <name>V7C774_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G156900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C774"/>
    <dbReference type="STRING" id="3885.V7C774"/>
    <dbReference type="Gramene" id="ESW24751">
        <property type="protein sequence ID" value="ESW24751"/>
        <property type="gene ID" value="PHAVU_004G156900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S18I">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LTTCEEM"/>
    <dbReference type="OrthoDB" id="902328at2759"/>
    <dbReference type="PhylomeDB" id="V7C774"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33384:SF22">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33384">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="161" mass="17634" checksum="B24321730991A259" modified="2014-02-19" version="1">MNQCGYQQKKALTTCEEMRMESVVCPKPRRSGFMSHSTFDNHIRPLRPPFISYQSEIEDSGVGAELMDIILSKRSGGQLASSPPFYCGSPPSRASNPVIQDEQFGNGIENFVPFSLAPPSPSSSARGCVRMKFGHTPAAVRIEGFDCLSRDRRNCSISAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7B0</accession>
    <name>V7C7B0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G089000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7B0"/>
    <dbReference type="Gramene" id="ESW26072">
        <property type="protein sequence ID" value="ESW26072"/>
        <property type="gene ID" value="PHAVU_003G089000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SBU4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPFESDM"/>
    <dbReference type="OrthoDB" id="749393at2759"/>
    <dbReference type="PhylomeDB" id="V7C7B0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="157" mass="18353" checksum="A9A4E612BC02DE3D" modified="2014-02-19" version="1">MEQQKMKRGRQGEDERQKEWYENENNVNGKRRDVRGMKLMKEVEKEKKEKQKAGCSSDAWESQLALGVFDFPWLKDGVTCKSEDYFLDFEDNFSSLLQQEDASSKASTVDLSRAYGLFETPEDKLEDIAWQPFESDMVEHEAEDVDCIWSSLLKHPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7C927</accession>
    <name>V7C927_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Phospholipid-transporting ATPase</fullName>
            <ecNumber evidence="16">7.6.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G072200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12 16">
            <text>ATP + H2O + phospholipidSide 1 = ADP + phosphate + phospholipidSide 2.</text>
            <dbReference type="EC" id="7.6.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="16">Membrane</location>
            <topology evidence="16">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.1" evidence="16"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C927"/>
    <dbReference type="STRING" id="3885.V7C927"/>
    <dbReference type="Gramene" id="ESW25868">
        <property type="protein sequence ID" value="ESW25868"/>
        <property type="gene ID" value="PHAVU_003G072200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0206">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHSFWSW"/>
    <dbReference type="OrthoDB" id="377733at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140327">
        <property type="term" value="F:flippase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048194">
        <property type="term" value="P:Golgi vesicle budding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045332">
        <property type="term" value="P:phospholipid translocation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02073">
        <property type="entry name" value="P-type_ATPase_APLT_Dnf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1110.10:FF:000029">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000023">
        <property type="entry name" value="Phospholipid-transporting ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.150.10">
        <property type="entry name" value="Calcium-transporting ATPase, cytoplasmic transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006539">
        <property type="entry name" value="P-type_ATPase_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032630">
        <property type="entry name" value="P_typ_ATPase_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01652">
        <property type="entry name" value="ATPase-Plipid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092:SF180">
        <property type="entry name" value="PHOSPHOLIPID-TRANSPORTING ATPASE DNF1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24092">
        <property type="entry name" value="PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13246">
        <property type="entry name" value="Cation_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16212">
        <property type="entry name" value="PhoLip_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00119">
        <property type="entry name" value="CATATPASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00002">
        <property type="entry name" value="C1.7:_P-type_atpase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="Calcium ATPase, transduction domain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="Calcium ATPase, transmembrane domain M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="Metal cation-transporting ATPase, ATP-binding domain N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 14 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 15 16" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 14 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 16" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="206"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="767"/>
            <end position="785"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="805"/>
            <end position="824"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="845"/>
            <end position="868"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="883"/>
            <end position="902"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="914"/>
            <end position="936"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="948"/>
            <end position="977"/>
        </location>
    </feature>
    <feature type="domain" description="P-type ATPase C-terminal" evidence="17">
        <location>
            <begin position="736"/>
            <end position="986"/>
        </location>
    </feature>
    <feature type="active site" description="4-aspartylphosphate intermediate" evidence="13">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="388"/>
        </location>
        <ligand>
            <name>ATP</name>
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        </ligand>
    </feature>
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        <location>
            <position position="436"/>
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        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="459"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="493"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="573"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
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            <position position="574"/>
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        <ligand>
            <name>ATP</name>
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        <location>
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            <name>ATP</name>
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        <location>
            <position position="684"/>
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        <ligand>
            <name>ATP</name>
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        <location>
            <position position="690"/>
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        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
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        <location>
            <position position="710"/>
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        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
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        <location>
            <position position="713"/>
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        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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        <location>
            <position position="714"/>
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        <ligand>
            <name>ATP</name>
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        <location>
            <position position="714"/>
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        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00022989"/>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00023136"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00034036"/>
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    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR606539-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-2"/>
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    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR606539-3"/>
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    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU362033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF16212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW25868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1080" mass="123207" checksum="05F7CBB707CF0EEE" modified="2014-02-19" version="1">MDVTNIVHARELTINYTLLQVKQDGFFPADLLFLASTNSDGVCYIETANLDGETNLKIRKALEKTWDYVTPDKASEFKGEIQCEQPNNSLYTFTGNLISQKQTLPLSPNQILLRGCSLRNTEYIVGVVVFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPRNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLSMYHAETNTPALARTSNLNEELGQVEYVFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERSGMKIEENTSSKAVHERGFNFDDARLMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKIQDMCYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERMADSSNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQYVISSETDAIREVEDRGDQVEIARFIKEEVKKELKRCLQEAQNYFHSSSGPKLALVIDGKCLMYALDPSLRVMLLNISLNCHSVVCCRVSPLQKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSIYQSLVFFYFVSTTNLSAKNSAGKIFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENIYFVIYVLMTTFYFYVMLILVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRDEVDNTGRAQLLEIGNQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMRSRPKIGHHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA67</accession>
    <name>V7CA67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G094700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Positive regulator of brassinosteroid signaling.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA67"/>
    <dbReference type="SMR" id="V7CA67"/>
    <dbReference type="STRING" id="3885.V7CA67"/>
    <dbReference type="Gramene" id="ESW26145">
        <property type="protein sequence ID" value="ESW26145"/>
        <property type="gene ID" value="PHAVU_003G094700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTM9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNQFPDM"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="PhylomeDB" id="V7CA67"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd18919">
        <property type="entry name" value="bHLH_AtBPE_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000058">
        <property type="entry name" value="transcription factor BEE 3-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024097">
        <property type="entry name" value="bHLH_ZIP_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12565">
        <property type="entry name" value="STEROL REGULATORY ELEMENT-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12565:SF340">
        <property type="entry name" value="TRANSCRIPTION FACTOR BEE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="8">
        <location>
            <begin position="162"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="102"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="113"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="129"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="144"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00055372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="273" mass="30681" checksum="978DAB5868432B88" modified="2014-02-19" version="1">MAEFTENLQLQSIRPSSFPFLDIDPSMELLNQFIGMNQHVIDNSNLTMHNLMPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNALPVSLPIFQAENKIHDGKKRKSMDLPETSSANSTPAVSESGSKRKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGKYKREGYGGVSCFQPSWPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAQ3</accession>
    <name>V7CAQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Translation initiation factor IF-1, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G183400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the IF-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAQ3"/>
    <dbReference type="SMR" id="V7CAQ3"/>
    <dbReference type="STRING" id="3885.V7CAQ3"/>
    <dbReference type="Gramene" id="ESW27209">
        <property type="protein sequence ID" value="ESW27209"/>
        <property type="gene ID" value="PHAVU_003G183400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S8M9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEGLIME"/>
    <dbReference type="OrthoDB" id="1714886at2759"/>
    <dbReference type="PhylomeDB" id="V7CAQ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04451">
        <property type="entry name" value="S1_IF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000019">
        <property type="entry name" value="Translation initiation factor IF-1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00075">
        <property type="entry name" value="IF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004368">
        <property type="entry name" value="TIF_IF1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00008">
        <property type="entry name" value="infA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33370">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33370:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="6" id="KW-0934">Plastid</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1-like" evidence="10">
        <location>
            <begin position="59"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00068272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="139" mass="15586" checksum="39D3C0D01DBD35B3" modified="2014-02-19" version="1">MFTSSTPTSLRTPILHHALPSSSFRTNFSPLTLPPFHRTLSFLPPPPLIPAVPTLPTAVKADKSGEQKWVHEGLIMESLPNGMFRVRLDNEDLILGYISGKIRKNYVRILPGDRVKVEVSRYDSSKGRIVYRLRSSTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAW7</accession>
    <name>V7CAW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CMP/dCMP-type deaminase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G124100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAW7"/>
    <dbReference type="SMR" id="V7CAW7"/>
    <dbReference type="STRING" id="3885.V7CAW7"/>
    <dbReference type="Gramene" id="ESW26498">
        <property type="protein sequence ID" value="ESW26498"/>
        <property type="gene ID" value="PHAVU_003G124100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1018">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAGHHEV"/>
    <dbReference type="OrthoDB" id="408702at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047974">
        <property type="term" value="F:guanosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006152">
        <property type="term" value="P:purine nucleoside catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01285">
        <property type="entry name" value="nucleoside_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.140.10:FF:000011">
        <property type="entry name" value="tRNA-specific adenosine deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.10">
        <property type="entry name" value="Cytidine Deaminase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11079:SF161">
        <property type="entry name" value="CMP_DCMP-TYPE DEAMINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11079">
        <property type="entry name" value="CYTOSINE DEAMINASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="Cytidine deaminase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="5">
        <location>
            <begin position="29"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="186" mass="20387" checksum="E01B36C3B68C9483" modified="2014-02-19" version="1">MEEVNVVETKDGTVSVASEFAGHHEVVQDTDHKFVTKAVEEAYNGVDCKDGGPFGAVIVCKGEIVASCHNMVLRNTDPTAHAEVTAIREACKKLNQIELTDCEIFTSCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAMIAEEIFEKTKTKFQMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB43</accession>
    <name>V7CB43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PPC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G195100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB43"/>
    <dbReference type="STRING" id="3885.V7CB43"/>
    <dbReference type="Gramene" id="ESW27359">
        <property type="protein sequence ID" value="ESW27359"/>
        <property type="gene ID" value="PHAVU_003G195100g"/>
    </dbReference>
    <dbReference type="OMA" id="VIDQNHE"/>
    <dbReference type="OrthoDB" id="1436897at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003680">
        <property type="term" value="F:minor groove of adenine-thymine-rich DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11378">
        <property type="entry name" value="DUF296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.80">
        <property type="entry name" value="Hypothetical protein, similar to alpha- acetolactate decarboxylase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014476">
        <property type="entry name" value="AHL15-29"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005175">
        <property type="entry name" value="PPC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31100:SF63">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31100">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03479">
        <property type="entry name" value="PCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117856">
        <property type="entry name" value="AF0104/ALDC/Ptd012-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51742">
        <property type="entry name" value="PPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PPC" evidence="6">
        <location>
            <begin position="65"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="29"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW27359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="189" mass="20244" checksum="8C209EA186D8A83D" modified="2014-02-19" version="1">MVQPSNVTTLSSTLISSSDDNTFDGVIDSSSHSKPPSSSSKRTRGRPAGSKNKQKLAIVIDQNHEHVQKPILIQIPINSDVIETLTQFVCDHQISIAVQSASGSILNATLRDDQSEISTFIVHGPFTLASFTGPCIYNNYSTTSLSSNLDYFLNISFCSNLDQSFVGVVGGKVIAGDDVVVTATTFKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCT8</accession>
    <name>V7CCT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G174300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCT8"/>
    <dbReference type="SMR" id="V7CCT8"/>
    <dbReference type="STRING" id="3885.V7CCT8"/>
    <dbReference type="Gramene" id="ESW27105">
        <property type="protein sequence ID" value="ESW27105"/>
        <property type="gene ID" value="PHAVU_003G174300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMCSCES"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000388">
        <property type="entry name" value="Putative RING zinc finger domain superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051653">
        <property type="entry name" value="E3_ligase_sorting_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47168:SF1">
        <property type="entry name" value="OS02G0798600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47168">
        <property type="entry name" value="RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="478"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="78"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="118"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="82"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="139"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="539" mass="58491" checksum="39CF0AA5E4B54FA4" modified="2014-02-19" version="1">MGSSSSRHASRPSASSTHRVNRFRLSSLLCGTSTSRSIHQMEEHSAELQVHLARNFEGEIHKVTEETSLLCTEARISCSPPAETSTSSDMRTEFHGNTSAGSSYRNVATHGHRNCLSEHEEQAPPCQVSAGRSGRESYSDSSNTASTSFVAQQSSDPVSVNVSANKDVVNDVNYPVVSGGVSQVSHETVHPRSSTPREHVNFSSGEISVENHNSAFISIQNSSNLAQGSNLAATSQGQEEEPCRETIPSGLGILVSNRERGPGNDSVLQVDVVTISSNILSGSNADANDHDARRSGRRLFWDAFSRRSSRRLGDSPTIVFSTAVADDPGSQDRWLVDFGGDLSNDGVGGASGYMGSRIHRLNERRRRHSRSEIWDRLRGGFDEIGRWNSCPLGLHADGMCSCESSPMADESSTRASISRIVMLAEALFEVLDEIHRQPGSLSLSMVSLPAPESIVDSFPLKSHKKVEVADGGNDVEQCYICLAEYEEGDQIRVLPCLHEYHMSCVDKWLKEIHGVCPLCRGNVCGGFTESSANSEVQSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE14</accession>
    <name>V7CE14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">RING-Gid-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G286000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE14"/>
    <dbReference type="SMR" id="V7CE14"/>
    <dbReference type="STRING" id="3885.V7CE14"/>
    <dbReference type="Gramene" id="ESW28432">
        <property type="protein sequence ID" value="ESW28432"/>
        <property type="gene ID" value="PHAVU_003G286000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2817">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTHEIVH"/>
    <dbReference type="OrthoDB" id="1933281at2759"/>
    <dbReference type="PhylomeDB" id="V7CE14"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034657">
        <property type="term" value="C:GID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043161">
        <property type="term" value="P:proteasome-mediated ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16652">
        <property type="entry name" value="dRING_Rmd5p-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000143">
        <property type="entry name" value="Regulator of gluconeogenesis Rmd5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013144">
        <property type="entry name" value="CRA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024964">
        <property type="entry name" value="CTLH/CRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006595">
        <property type="entry name" value="CTLH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045098">
        <property type="entry name" value="Fyv10_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037683">
        <property type="entry name" value="Rmd5_dRing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044063">
        <property type="entry name" value="ZF_RING_GID"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027370">
        <property type="entry name" value="Znf-RING_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12170">
        <property type="entry name" value="MACROPHAGE ERYTHROBLAST ATTACHER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12170:SF11">
        <property type="entry name" value="PROTEIN RMD5 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10607">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13445">
        <property type="entry name" value="zf-RING_UBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00757">
        <property type="entry name" value="CRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00668">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50897">
        <property type="entry name" value="CTLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51867">
        <property type="entry name" value="ZF_RING_GID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CTLH" evidence="10">
        <location>
            <begin position="150"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="RING-Gid-type" evidence="11">
        <location>
            <begin position="329"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="9">
        <location>
            <begin position="329"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="RING-Gid-type" evidence="7">
        <location>
            <begin position="329"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="21"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="386" mass="43789" checksum="E7F68C0FF383913B" modified="2014-02-19" version="1">MELSTIKEAFDRVTKKQKLSCSKTQEAIDQIRQEIESVLDTMQSVNNTDRELDYKTVLGELKASLLKAAPLTQMEGTQKELNVALNKYGKLLEKYFNPDISKAYRNIDIDIHTLNQIIANHFYRQGLFEIGDNFMNVVGEPESAAIMKSPFLEMYRILEAMQNHNLEPALNWAASICDKLAQNGSDIVLKLHTMQFVKVLQNGSREEALTYARTHLSPFASSHMTEIQKLMGCLLWTGKLDRSPYHALLSPSNWDKLAEELKMQFCNLLGQSYNSPLSVTVAAGVQVLPALLKFMNVMAGKKHEWQSMNQLPVPVELDSEFQFHSIFVCPVSKEQATEDNPPMLMACGHVLCKQSILKMSKNSTKVFKCPYCPFDIDASQCRQLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7CE21</accession>
    <name>V7CE21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Uridine kinase</fullName>
            <ecNumber evidence="12">2.7.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G210100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>cytidine + ATP = CMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17562"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.48"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>uridine + ATP = UMP + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16825"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.48"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Pyrimidine metabolism; CTP biosynthesis via salvage pathway; CTP from cytidine: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Pyrimidine metabolism; UMP biosynthesis via salvage pathway; UMP from uridine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the uridine kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the UPRTase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the uridine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.48" evidence="12"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CE21"/>
    <dbReference type="SMR" id="V7CE21"/>
    <dbReference type="STRING" id="3885.V7CE21"/>
    <dbReference type="Gramene" id="ESW27530">
        <property type="protein sequence ID" value="ESW27530"/>
        <property type="gene ID" value="PHAVU_003G210100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4203">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWHPSTT"/>
    <dbReference type="OrthoDB" id="106623at2759"/>
    <dbReference type="UniPathway" id="UPA00574">
        <property type="reaction ID" value="UER00637"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00579">
        <property type="reaction ID" value="UER00640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043771">
        <property type="term" value="F:cytidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004849">
        <property type="term" value="F:uridine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044211">
        <property type="term" value="P:CTP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000904">
        <property type="term" value="P:regulation of starch metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044206">
        <property type="term" value="P:UMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02023">
        <property type="entry name" value="UMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2020:FF:000015">
        <property type="entry name" value="Uridine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000339">
        <property type="entry name" value="Uridine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRTase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000764">
        <property type="entry name" value="Uridine_kinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001162">
        <property type="entry name" value="UvrC_RNase_H_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001097">
        <property type="entry name" value="PRK00129.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004018">
        <property type="entry name" value="PRK05480.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00235">
        <property type="entry name" value="udk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10285">
        <property type="entry name" value="URIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14681">
        <property type="entry name" value="UPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00988">
        <property type="entry name" value="URIDINKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="PRTase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50165">
        <property type="entry name" value="UVRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="9 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="8 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UvrC family homology region profile" evidence="14">
        <location>
            <begin position="119"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="17"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW27530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="452" mass="50857" checksum="44848FEA0FC2E5FC" modified="2014-02-19" version="1">MVIEVSSGSHFSGWHPSTTSSSSSSSSSHPPFIIGVAGGTASGKTTVCDIIIQQLKDHRVVLLCQDSFYRGLTNDELQRVHEYNFDHPNAFDTEQLVETLAQLKSGQSVQIPIYDFKLHQRSTDRSRQVNASDVIIMEGILVFHEQRVRNMMNMKIFVDGDPDVRLARRIKRDTVERGRDVQSVLEQYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVLKSTFQTRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDETQLIYEKLPRDISERHVLLMDPVLGTGNTASEAIELLIKKGVPESQIIFLNLISAPEGIQCVCKRFPHLKIVTSEIEAGLNDQFQVIPGLGEFGDRYFGTDDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF15</accession>
    <name>V7CF15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G238800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF15"/>
    <dbReference type="STRING" id="3885.V7CF15"/>
    <dbReference type="Gramene" id="ESW27865">
        <property type="protein sequence ID" value="ESW27865"/>
        <property type="gene ID" value="PHAVU_003G238800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYRJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GGENMET"/>
    <dbReference type="OrthoDB" id="1933825at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053266">
        <property type="entry name" value="Zinc_finger_protein_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47593:SF9">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47593">
        <property type="entry name" value="ZINC FINGER PROTEIN 4-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="2">
        <location>
            <begin position="68"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="197" mass="22333" checksum="5BB8A59E3B5AD901" modified="2014-02-19" version="1">MTFLREDEVDDHDHDQHVSINDNHANCEIVTPEGDNLGEWLSLSLKGEMPVEAAEEQNSSKPHHSKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSHRMMGTRSPMGFAYTSLASRFLGIQPHSINVHKRGRERSGMVARFKDGNSNGAGVASWTPFMLEQAVDLYWPGSFRVDLPKQESDVNKIDLDLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGK0</accession>
    <name>V7CGK0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G055100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGK0"/>
    <dbReference type="STRING" id="3885.V7CGK0"/>
    <dbReference type="Gramene" id="ESW29244">
        <property type="protein sequence ID" value="ESW29244"/>
        <property type="gene ID" value="PHAVU_002G055100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0691">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TAWIHLH"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000086">
        <property type="entry name" value="Chaperone protein dnaJ 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052423">
        <property type="entry name" value="EMIR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44094:SF17">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44094">
        <property type="entry name" value="DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="6"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="14620" checksum="D5C343E4D68F0F8C" modified="2014-02-19" version="1">MVKETEYYDVLGVIPTASEAEIKKAYYMKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPGQRQAYDAHGKSGISTEAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFTEGEQFDTKKLQEKMRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGL3</accession>
    <name>V7CGL3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G284600g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGL3"/>
    <dbReference type="SMR" id="V7CGL3"/>
    <dbReference type="Gramene" id="ESW28415">
        <property type="protein sequence ID" value="ESW28415"/>
        <property type="gene ID" value="PHAVU_003G284600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LHEPWNA"/>
    <dbReference type="OrthoDB" id="9984778at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000187">
        <property type="entry name" value="E3 ubiquitin-protein ligase ATL6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044600">
        <property type="entry name" value="ATL1/ATL16-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913:SF22">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01197">
        <property type="entry name" value="FANCL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="17">
        <location>
            <begin position="140"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="287"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="206"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="38991" checksum="84B27B9D703AA7C2" modified="2014-02-19" version="1">MAAVANPRTWIPYMNSKDCSQGFCSLYCPQWCYIVYPPPPPFEYPDDDSSPNFSPLVIAIIGIMATAFLLASYYTLISKYCGPRESARRDPNENLQATHNPSLHEPWNASSTGLDEALIKSIAIFKYKKRDGGSVAVTDCSVCLSEFEDDESVRLLPKCSHVFHAPCIDTWLKSHSSCPLCRAAIFTFNNGSVPRAHTPEEEAPSLRNNETFSESESVGSGNEYGVVVMLEEEGIHHARAYPKPALRAFSDLSSLQGRHRVIEIRDEVCESVGRSVSMDHSFQRHEEEDSYVEGCSTTEPGPSKRSRRESYKTRVLHCVLSPIAMKRSFSSHRFSLGKSSRAWHGTIPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHZ2</accession>
    <name>V7CHZ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G033400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHZ2"/>
    <dbReference type="SMR" id="V7CHZ2"/>
    <dbReference type="STRING" id="3885.V7CHZ2"/>
    <dbReference type="Gramene" id="ESW28973">
        <property type="protein sequence ID" value="ESW28973"/>
        <property type="gene ID" value="PHAVU_002G033400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPVC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1923043at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35490">
        <property type="entry name" value="BACTERIOPHAGE N4 ADSORPTION B PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35490:SF2">
        <property type="entry name" value="BACTERIOPHAGE N4 ADSORPTION B PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="343"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="12"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="370"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="301"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="21"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="370"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW28973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="394" mass="44063" checksum="B700640C02F44F91" modified="2014-02-19" version="1">MSSFTSIALDRLIEPGASNPVDESTPTSIPIPNSQKLERSTKAPANKSKSFSDVEIHDGENVNQKSFDAVVASSAGDFPVTFTNTELVKENKGNGVYDGKLDSSNGADLANCPREAGSSSLTDYLLKEKPPALKLDRFREVEDFFDPPDSMSFASNTDGEENLSMKFSSPIQEYHDAWEEFSSTGMSQNSTEDVDTEVELHEMRLSLLVEIEKRKQAEESLNTMRSQWESIRQGLYQAGVILPAELTSVAKDEQLNSEGVEDICQQVYIARIISNTIGKGIARAEVETEMEAQLQAKNFDIARLLERIRCYETMNREMSQRNQEAVEMARRERQRRRNKRQRWIWGSIKTVISLITVALVSSYLPVDTGSSSAEHDLTSSTELDLTPEHDDVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJG3</accession>
    <name>V7CJG3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">chalcone synthase</fullName>
            <ecNumber evidence="4">2.3.1.74</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G0392000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Secondary metabolite biosynthesis; flavonoid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.74" evidence="4"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJG3"/>
    <dbReference type="eggNOG" id="ENOG502QRSY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1854138at2759"/>
    <dbReference type="UniPathway" id="UPA00154"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016210">
        <property type="term" value="F:naringenin-chalcone synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009813">
        <property type="term" value="P:flavonoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030639">
        <property type="term" value="P:polyketide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.47.10:FF:000014">
        <property type="entry name" value="Chalcone synthase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012328">
        <property type="entry name" value="Chalcone/stilbene_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011141">
        <property type="entry name" value="Polyketide_synthase_type-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11877:SF62">
        <property type="entry name" value="CHALCONE SYNTHASE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11877">
        <property type="entry name" value="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02797">
        <property type="entry name" value="Chal_sti_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="Thiolase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0284">Flavonoid biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Chalcone/stilbene synthase C-terminal" evidence="8">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="151" mass="16377" checksum="D3449472ECFB17C8" modified="2014-02-19" version="1" fragment="single">LVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CME0</accession>
    <name>V7CME0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Endoglucanase</fullName>
            <ecNumber evidence="10">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G160200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the glycosyl hydrolase 9 (cellulase E) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CME0"/>
    <dbReference type="SMR" id="V7CME0"/>
    <dbReference type="STRING" id="3885.V7CME0"/>
    <dbReference type="Gramene" id="ESW30528">
        <property type="protein sequence ID" value="ESW30528"/>
        <property type="gene ID" value="PHAVU_002G160200g"/>
    </dbReference>
    <dbReference type="OMA" id="NNQGWSQ"/>
    <dbReference type="OrthoDB" id="10257085at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030245">
        <property type="term" value="P:cellulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.10:FF:000020">
        <property type="entry name" value="Endoglucanase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001701">
        <property type="entry name" value="Glyco_hydro_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033126">
        <property type="entry name" value="Glyco_hydro_9_Asp/Glu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018221">
        <property type="entry name" value="Glyco_hydro_9_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22298">
        <property type="entry name" value="ENDO-1,4-BETA-GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00759">
        <property type="entry name" value="Glyco_hydro_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="Six-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00592">
        <property type="entry name" value="GH9_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00698">
        <property type="entry name" value="GH9_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 10" id="KW-0136">Cellulose degradation</keyword>
    <keyword evidence="6 8 10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8 10" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149100" description="Endoglucanase" evidence="10">
        <location>
            <begin position="24"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 9" evidence="11">
        <location>
            <begin position="41"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="415"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="467"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="54461" checksum="673A035B57267C40" modified="2014-02-19" version="1">MGYHSVFIAVFLWSSMVCHNGLAMMDDGKLTSSSGPPNYDYADALAKAILFFEGQRSGKLPSSQRVKWREDSALSDGKLQNVNLMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQSAIRWGADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDANSPGTEVAAEYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYSGSCPFYCSYSGYQDELLWAAAWLYKASGESKYLSYIISNQGWSQTVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKIKTDAESFICAVMPGSNSRQIKTTPGGLLFTRDSSNLQYTTSSTMVLFIFSRILNRNHINGINCGSSHFTASQIRGFAKTQVEYILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHPAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARSDYSHAEPTTYINAAFVASISALLAKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN11</accession>
    <name>V7CN11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Gamma-glutamylcyclotransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G140900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Putative gamma-glutamylcyclotransferase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the gamma-glutamylcyclotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN11"/>
    <dbReference type="SMR" id="V7CN11"/>
    <dbReference type="STRING" id="3885.V7CN11"/>
    <dbReference type="Gramene" id="ESW30291">
        <property type="protein sequence ID" value="ESW30291"/>
        <property type="gene ID" value="PHAVU_002G140900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4450">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPYVTHQ"/>
    <dbReference type="OrthoDB" id="113620at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061929">
        <property type="term" value="F:gamma-glutamylaminecyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.490.10">
        <property type="entry name" value="Gamma-glutamyl cyclotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009288">
        <property type="entry name" value="AIG2-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039126">
        <property type="entry name" value="GGACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036568">
        <property type="entry name" value="GGCT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12510:SF15">
        <property type="entry name" value="GAMMA-GLUTAMYLCYCLOTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12510">
        <property type="entry name" value="TROPONIN C-AKIN-1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06094">
        <property type="entry name" value="GGACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110857">
        <property type="entry name" value="Gamma-glutamyl cyclotransferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Gamma-glutamylcyclotransferase AIG2-like" evidence="6">
        <location>
            <begin position="15"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR639126-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="19156" checksum="9C0FACFD297424FE" modified="2014-02-19" version="1">MERGSEKEKLKTHLIFAYGTLKRGFPNHYLMEELMSQDDADLVGAYLTEDCYPLVCGPHGIPYLINLPGSGHRVKGEVYAVSESAVAKLDEFEGVSAGCYERLPVMVVVAEEGGERVEAEAYWGHRRFGEVLWKTKGEVGLKEYGEKEAKEYVRKENRTGRRNTILDLVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNM2</accession>
    <name>V7CNM2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Albumin-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G268600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNM2"/>
    <dbReference type="SMR" id="V7CNM2"/>
    <dbReference type="STRING" id="3885.V7CNM2"/>
    <dbReference type="Gramene" id="ESW31797">
        <property type="protein sequence ID" value="ESW31797"/>
        <property type="gene ID" value="PHAVU_002G268600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="756060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.110.10.10">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036375">
        <property type="entry name" value="Hemopexin-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50923">
        <property type="entry name" value="Hemopexin-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="201" mass="23322" checksum="AAED061222CA670A" modified="2014-02-19" version="1">MQIDGEERDAHQEPRIEPYPECYFPRIPRYIDAAFRSSTTNEVYFFLIDKYVRVYYTPGQERQTDDKFLTDFPFASCGIRCAFDTEGNEAYIFSGNMGVCLDYANDKVLTGIERRIGDMFPILNDTVFQDGIIQVIQRKRTYLFKGENYALMNFITGSPDATLVHGVKPIIDGWSSFRDILPLDNMLCEYSTEEYDYSSDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQZ2</accession>
    <name>V7CQZ2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G2573000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the DnaJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQZ2"/>
    <dbReference type="SMR" id="V7CQZ2"/>
    <dbReference type="STRING" id="3885.V7CQZ2"/>
    <dbReference type="Gramene" id="ESW31664">
        <property type="protein sequence ID" value="ESW31664"/>
        <property type="gene ID" value="PHAVU_002G2573000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW31665">
        <property type="protein sequence ID" value="ESW31665"/>
        <property type="gene ID" value="PHAVU_002G2573000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0715">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GMSRNMH"/>
    <dbReference type="OrthoDB" id="10256793at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031072">
        <property type="term" value="F:heat shock protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10747">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10719">
        <property type="entry name" value="DnaJ_zf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.260.20:FF:000005">
        <property type="entry name" value="Chaperone protein dnaJ 1, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.110:FF:000037">
        <property type="entry name" value="Chaperone protein dnaJ A6 chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.230.10:FF:000002">
        <property type="entry name" value="Molecular chaperone DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.260.20:FF:000009">
        <property type="entry name" value="Putative Mitochondrial DnaJ chaperone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.230.10">
        <property type="entry name" value="Heat shock protein DnaJ, cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.260.20">
        <property type="entry name" value="Urease metallochaperone UreE, N-terminal domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01152">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012724">
        <property type="entry name" value="DnaJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02349">
        <property type="entry name" value="DnaJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF008035">
        <property type="entry name" value="PRK10767.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096:SF10">
        <property type="entry name" value="CHAPERONE PROTEIN DNAJ A6, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43096">
        <property type="entry name" value="DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="DnaJ/Hsp40 cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="HSP40/DnaJ peptide-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 11" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="12">
        <location>
            <begin position="83"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="13">
        <location>
            <begin position="208"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="11">
        <location>
            <begin position="208"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00061004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW31665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="438" mass="47250" checksum="53F70C0BACB30834" modified="2014-02-19" version="1">MAITTFSSTSAAQWGIHPRLLVRSSITGKVASSSHNATSRVSFMAASSSSFFSRDSTLLSVGAPQTCSRRKGSRLIVRADAQDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGAGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPTRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEMSTPCNTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNSGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYSCKVSYIDAILGTTTKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPFLNKNNMRGDQLVRVQVEIPKRLSNDERKLIEELADLSKGKTATGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRD7</accession>
    <name>V7CRD7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Alpha-1,3-glucosyltransferase</fullName>
            <ecNumber evidence="10">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G2434000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2 10">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Endoplasmic reticulum membrane</location>
            <topology evidence="1 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the ALG6/ALG8 glucosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRD7"/>
    <dbReference type="STRING" id="3885.V7CRD7"/>
    <dbReference type="Gramene" id="ESW31501">
        <property type="protein sequence ID" value="ESW31501"/>
        <property type="gene ID" value="PHAVU_002G2434000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2575">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELLWHTA"/>
    <dbReference type="OrthoDB" id="4983at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042281">
        <property type="term" value="F:dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004856">
        <property type="entry name" value="Glyco_trans_ALG6/ALG8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12413">
        <property type="entry name" value="DOLICHYL GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12413:SF1">
        <property type="entry name" value="DOLICHYL PYROPHOSPHATE MAN9GLCNAC2 ALPHA-1,3-GLUCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03155">
        <property type="entry name" value="Alg6_Alg8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="4 10" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="36"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="64"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW31501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="94" mass="10439" checksum="397A602A5C081B5A" modified="2014-02-19" version="1" fragment="single">MRWTVLSSDALIFFPAVVYFIVVHYNQPSRSHKSELLWHTAVLLLSPCLILIDHGHFQFNCISLGFSVGAVAAILSGKDLVGSVLYCLALNHKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRL1</accession>
    <name>V7CRL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RecQ-mediated genome instability protein 1</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">BLM-associated protein of 75 kDa homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G284900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RMI1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRL1"/>
    <dbReference type="SMR" id="V7CRL1"/>
    <dbReference type="STRING" id="3885.V7CRL1"/>
    <dbReference type="Gramene" id="ESW31998">
        <property type="protein sequence ID" value="ESW31998"/>
        <property type="gene ID" value="PHAVU_002G284900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPJ3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCILQVV"/>
    <dbReference type="OrthoDB" id="341511at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016604">
        <property type="term" value="C:nuclear body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031422">
        <property type="term" value="C:RecQ family helicase-topoisomerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000712">
        <property type="term" value="P:resolution of meiotic recombination intermediates"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.770:FF:000004">
        <property type="entry name" value="RecQ-mediated instability protein (DUF1767)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.770">
        <property type="entry name" value="RecQ-mediated genome instability protein Rmi1, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032199">
        <property type="entry name" value="RMI1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049363">
        <property type="entry name" value="RMI1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042470">
        <property type="entry name" value="RMI1_N_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013894">
        <property type="entry name" value="RMI1_OB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14790:SF15">
        <property type="entry name" value="RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14790">
        <property type="entry name" value="RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16099">
        <property type="entry name" value="RMI1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08585">
        <property type="entry name" value="RMI1_N_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21000">
        <property type="entry name" value="RMI1_N_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01161">
        <property type="entry name" value="DUF1767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RMI1 N-terminal" evidence="7">
        <location>
            <begin position="69"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="RecQ mediated genome instability protein 1 OB-fold" evidence="5">
        <location>
            <begin position="124"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="RecQ-mediated genome instability protein 1 C-terminal OB-fold" evidence="6">
        <location>
            <begin position="462"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="276"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="4">
        <location>
            <begin position="25"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="277"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00077519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08585"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF21000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="623" mass="68269" checksum="0B83450A58AE9F56" modified="2014-02-19" version="1">MPVRRLRLDSDTDEEEQDQLQPQSLPRPQPQPQPHFPAVPVEISDDDDFIDVAESFSPPSPSCPVTDFLQRLGLSLKRDWLASCLRQLQASVTSFEHLDVATKAKSCFEQCLFADMNSCGAGILPPNVDSMHLRVLPGPYVLQVDEIVNITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRATLAAWPSGGVDNRACNGSTLHSTVSSQENNQGAGPSIPGTVNSLTTEDTLSMGAQSAASNSIPYTSSNSDAMNVDTPRDTNPVSRVSPMANQLSSVISKAKEMHIDAANTREYSIDHQSSNMDSDVAASHIDTVNITRESSITIEYSPVVENVETDTDRTPVVTDTTHLQRTSSTALNTSDVRMVDASDHPLILSGDQEVPFTYIASLSAKWAKMKEEAPSVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPKEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKSPLPLALEMSQGCPQSDAWLLLRRLKSLHSPQVQNPMDPIELSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS37</accession>
    <name>V7CS37_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G031400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS37"/>
    <dbReference type="STRING" id="3885.V7CS37"/>
    <dbReference type="Gramene" id="ESW32949">
        <property type="protein sequence ID" value="ESW32949"/>
        <property type="gene ID" value="PHAVU_001G031400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSZR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNHELPP"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47641:SF1">
        <property type="entry name" value="GOLGI-ASSOCIATED OLFACTORY SIGNALING REGULATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47641">
        <property type="entry name" value="PERIAXIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756038" evidence="2">
        <location>
            <begin position="30"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="295" mass="32749" checksum="61C3D8C1A641FF9F" modified="2014-02-19" version="1">MATCSLSRVIFSFVFLVLLSASSHTMVLGARDLLESTLSKPEVPQLPKPELPKIPELLPKPELSKVPELPKPELSKVPELPKPELPKVSELPKPELPKVPELPKPELPKVPELPKPELPKVPELPKPELPKVPELPKPELPKVPELPKIPELPKPELTKVPEVPKPELTKVPELPKFSEVPKSELPKVPELPKVPEVPKSELPKVPELPKVPEVPKSELPKVPELSKVPEVPKSELPKVPELPKVPEVPKSELPKVPELPKFDLPKIPELSKPELPKVPEIPKPELPKIPEIPKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS59</accession>
    <name>V7CS59_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Stress enhanced protein 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G264600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS59"/>
    <dbReference type="STRING" id="3885.V7CS59"/>
    <dbReference type="Gramene" id="ESW31751">
        <property type="protein sequence ID" value="ESW31751"/>
        <property type="gene ID" value="PHAVU_002G264600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXQW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAAIFAW"/>
    <dbReference type="OrthoDB" id="1937750at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071486">
        <property type="term" value="P:cellular response to high light intensity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3460.10">
        <property type="entry name" value="Chlorophyll a/b binding protein domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044971">
        <property type="entry name" value="SEP2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36490">
        <property type="entry name" value="STRESS ENHANCED PROTEIN 2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36490:SF1">
        <property type="entry name" value="STRESS ENHANCED PROTEIN 2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103511">
        <property type="entry name" value="Chlorophyll a-b binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="21157" checksum="399E1057768BDC38" modified="2014-02-19" version="1">MASAAARVTHCELRPARTAVRGRELGGPVQVTIPKPKAVETEGANTNIVLQPRLCTLRSYGSDRFGVIKTRREGGDEVLPFFAALSDYIESSKKSQDFEIISGRLAMMVFAGTVAMEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFSVGCNAFIDSVIDQIVDGLFYEGDPTDWPDQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTR1</accession>
    <name>V7CTR1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G015300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homooligomers form large rather nonselective pores in plastidial outer membranes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast outer membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Etioplast membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTR1"/>
    <dbReference type="STRING" id="3885.V7CTR1"/>
    <dbReference type="Gramene" id="ESW32763">
        <property type="protein sequence ID" value="ESW32763"/>
        <property type="gene ID" value="PHAVU_001G015300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUHD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AESTWNF"/>
    <dbReference type="OrthoDB" id="1185978at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009707">
        <property type="term" value="C:chloroplast outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034426">
        <property type="term" value="C:etioplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046930">
        <property type="term" value="C:pore complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015288">
        <property type="term" value="F:porin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022843">
        <property type="term" value="F:voltage-gated monoatomic cation channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034765">
        <property type="term" value="P:regulation of monoatomic ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034626">
        <property type="entry name" value="OEP24"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35284">
        <property type="entry name" value="OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35284:SF1">
        <property type="entry name" value="OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="11" id="KW-0406">Ion transport</keyword>
    <keyword evidence="13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="10" id="KW-1002">Plastid outer membrane</keyword>
    <keyword evidence="12" id="KW-0626">Porin</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1134">Transmembrane beta strand</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW32763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="23545" checksum="397058BC951F6ACE" modified="2014-02-19" version="1">MKATLKGKYDVDKNGAVFATVAVNAADVKLRASVTEATFINGPSLTGLALAVEKPGVFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRQDNRIVLDGSFVLDPANKVSANYALDSGNCKLKYSYVHKGLTTIEPAYDVAKNTWDFAVSRRVYGDDTLKASYQTSSKVLGVEWARNPKHNAGFKILASVNLAEELKAPKLIAETTWNFEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CX16</accession>
    <name>V7CX16_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">SWI/SNF complex subunit SWI3C</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G071900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CX16"/>
    <dbReference type="STRING" id="3885.V7CX16"/>
    <dbReference type="Gramene" id="ESW33466">
        <property type="protein sequence ID" value="ESW33466"/>
        <property type="gene ID" value="PHAVU_001G071900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1279">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RYMEDPG"/>
    <dbReference type="OrthoDB" id="118550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000014">
        <property type="entry name" value="SWI/SNF complex subunit SMARCC2 isoform C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032451">
        <property type="entry name" value="SMARCC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007526">
        <property type="entry name" value="SWIRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000433">
        <property type="entry name" value="Znf_ZZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12802">
        <property type="entry name" value="SWI/SNF COMPLEX-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12802:SF61">
        <property type="entry name" value="SWI_SNF COMPLEX SUBUNIT SWI3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04433">
        <property type="entry name" value="SWIRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16495">
        <property type="entry name" value="SWIRM-assoc_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50934">
        <property type="entry name" value="SWIRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50135">
        <property type="entry name" value="ZF_ZZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0217">Developmental protein</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIRM" evidence="13">
        <location>
            <begin position="163"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ZZ-type" evidence="12">
        <location>
            <begin position="326"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="11">
        <location>
            <begin position="381"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="14">
        <location>
            <begin position="384"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="538"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="691"/>
            <end position="710"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="739"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="14"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="35"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="697"/>
            <end position="710"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW33466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="776" mass="84954" checksum="FF9C90AA0DB825FE" modified="2014-02-19" version="1">MPPSPSFPSDNRTKWRKKRKRQSHKPHPNRHHQDDDDNDSDDDRDDNDSDDQFRSPNAPPNPNPRLEIEVVSRDGLQISRFPPAIRRTVTRPHAAVAAIVALESGRGHSQHGVPVLENVSHGQLQASSAVSADCLGGGSSFVAAPPPVMKGSGVVKRFGTRVLVVPMHSDWFSPASVHRLERQAVPHFFSGKSPDHTPEKYMECRNYIVARYMEDPGKRITVPSCQILSVGVGNEDLTRIVRFLDQWGIINYCAQDPRREYLDNDTCLTEDTSGALCVPSVALRSIDSLIEFDKPKCKFKAEEIYSSRTMHNTNISDLDGTIREYLSENYCHYCSRSLPVVYYQSQKEVDILLCTDCFHDGRFVTGHSSIDFITVDSTTDYGDLDGDSWTDQETLLLLEAVEVYNENWNEIAEHVGTKSKAQCILHFLRLPVGDGKLENINVSSLSLSSNINNQEGNGRLHCCSNGSSAGPIHNKDSDGRLPFANSGNPVMALVAFLASAVGPRVAATCAHAALAALSENNSGSVSDIEALENENRTNSESINNRDGGHHGVVANSNQKNEDKSKVPGSCAQDEAGSILLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNTKLKRLELKLKQFAEIETQLMKECEQVEKLRLRFASERSHVVSARLGNGGTTPPMNVSGVGPSMINNNSNSRQQMISASSSQPSISGYGNSQPVHPHMSFVPRPSMFGLGQRLPLSMIQQSQSVSSNSMFNGPSNVQPTPNHSLSRPVSRTNSGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYT9</accession>
    <name>V7CYT9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">glutathione gamma-glutamylcysteinyltransferase</fullName>
            <ecNumber evidence="1">2.3.2.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G162600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.2.15" evidence="1"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYT9"/>
    <dbReference type="SMR" id="V7CYT9"/>
    <dbReference type="STRING" id="3885.V7CYT9"/>
    <dbReference type="Gramene" id="ESW34558">
        <property type="protein sequence ID" value="ESW34558"/>
        <property type="gene ID" value="PHAVU_001G162600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0632">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMLICRP"/>
    <dbReference type="OrthoDB" id="448954at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016756">
        <property type="term" value="F:glutathione gamma-glutamylcysteinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098849">
        <property type="term" value="P:cellular detoxification of cadmium ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010273">
        <property type="term" value="P:detoxification of copper ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046938">
        <property type="term" value="P:phytochelatin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.30">
        <property type="entry name" value="Phytochelatin synthase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040409">
        <property type="entry name" value="PCS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007719">
        <property type="entry name" value="PCS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038156">
        <property type="entry name" value="PCS_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015407">
        <property type="entry name" value="Phytochelatin_synthase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33447">
        <property type="entry name" value="GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33447:SF2">
        <property type="entry name" value="GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09328">
        <property type="entry name" value="Phytochelatin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51443">
        <property type="entry name" value="PCS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0104">Cadmium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Peptidase C83" evidence="6">
        <location>
            <begin position="1"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW34558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="35732" checksum="DA135CEFFE75BFA3" modified="2014-02-19" version="1">MNGFYKRQLASPPAIDFSSDDGKELFLEAIHNGTMEGFYKLVSHFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCESLENVKVKGITFGKLVCLAQCAGAKVDSFRASHCSIDDFRKYVIKCSISDDCHLISSYHRAALKQEEVLKQVQETGLFKHVASFLSNSCSRESLDDEDALPVIAASVCCQAAEILAWKPCSPAGYRCQVTCMKRLKAEDDKPITMVSGTVVNGNTEQGVDVLVPSSCRKLCCSCSRPSDYMRMHPASMDVLTVLLLSLPSTTWAGITDKQLLTEIHGLVSTENLPSLLQEEVLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D045</accession>
    <name>V7D045_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G1896000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D045"/>
    <dbReference type="STRING" id="3885.V7D045"/>
    <dbReference type="Gramene" id="ESW34890">
        <property type="protein sequence ID" value="ESW34890"/>
        <property type="gene ID" value="PHAVU_001G1896000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34891">
        <property type="protein sequence ID" value="ESW34891"/>
        <property type="gene ID" value="PHAVU_001G1896000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1120">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GCAGQEY"/>
    <dbReference type="OrthoDB" id="333486at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="ATAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="ATAP_core_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050322">
        <property type="entry name" value="Fe-S_cluster_asmbl/transfer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00049">
        <property type="entry name" value="iron-sulfur cluster assembly accessory protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10072:SF41">
        <property type="entry name" value="IRON-SULFUR CLUSTER ASSEMBLY 1 HOMOLOG, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10072">
        <property type="entry name" value="IRON-SULFUR CLUSTER ASSEMBLY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="HesB-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core" evidence="2">
        <location>
            <begin position="22"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="102" mass="11208" checksum="1843D8FCA9CF991A" modified="2014-02-19" version="1" fragment="single">MASKAMGVVAEKIGAAARRQAVSLTDAAASRIRQLLQQRQRSFLKLGVKARGCNGLSYTLNYADEKGRFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P130</accession>
    <name>A0ACC3P130_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001763</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967775">
        <property type="protein sequence ID" value="KAK6645854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="448" mass="50082" checksum="91AE46AF7C300209" modified="2026-01-28" version="1">MQTLTNMLSLSPSVTANTHTLKPSNPNHLFLITSPSFTNRRHSVKPISAIINPSSFKNPQPPPQQQVYQPFRPPPEPLPSQYSTLDIAGRIDILANRLGLWYQYAPLITSLIREGFSPPTIEETTGITGVEQNRLIVATQVRDSLVQSNADPDLLYAFETSGAELLYEIRLLSTSQRVAAARFLVENNCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHKNPSDQRSSALEQALRVAETEKARKVVLEELEGNEEEDKVEDGERVRVPVVRLRIGEVAEASSVVVLPVCGAEEKEVLEAPFECRSEGEFGVVVAEKGWARWVVLPWWEPVVGLIKGGVVVSFPDARVLPWKANRWYKEEAVLVVADRSKREVGADDGFYLVNGYGDDGGLKVERGLTLKEKGFTQSLGTVLLVVRPPKDENEDQLTDEDWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1R3</accession>
    <name>A0ACC3P1R3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001688</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967798">
        <property type="protein sequence ID" value="KAK6645801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="329" mass="37002" checksum="1D866CD0BCB47D5E" modified="2026-01-28" version="1">MRRNHSNSGNYRNPCLTMHQPWASLLVYGIKRVEGRSWPSPIKGRLWIHAASKVPDESTIKAMEYFYREIYALNGVTDIQFPQHYPVSRLLGCVEVVGCLTRDELACWEMVPEGVRLEAQTNYCWLCERPQKLLIPFEMRGYQGVYNLERKIYDAAVRGLSPVNSPLPVKFPLPDPRDPFSLKPGSISAFTPKSKATEVGRSSSISLAIAGAQAAAIQFSKKDQNFHSTTARNNAPATMNADNEVTDTARSYNLRSDGRSMENDNISSTELDMKFDDTTFPLYREKKRSSNYSEGSSRQNRSTGAEADLRQYPQAPSKIFAAALKSLKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1Y0</accession>
    <name>A0ACC3P1Y0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L008843</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9642" checksum="1182342E444B0FDB" modified="2026-01-28" version="1">MAANISPDVLDKEQIFGMAEKEMEHRVESFNKITDTCFNKCVENRYKEPEINMGENSCIDRCVSKYWQVTNLIGQLLGSGKHPM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEM8</accession>
    <name>V7AEM8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G001800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEM8"/>
    <dbReference type="SMR" id="V7AEM8"/>
    <dbReference type="STRING" id="3885.V7AEM8"/>
    <dbReference type="Gramene" id="ESW03288">
        <property type="protein sequence ID" value="ESW03288"/>
        <property type="gene ID" value="PHAVU_011G001800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY1W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MFMFEDS"/>
    <dbReference type="OrthoDB" id="2019494at2759"/>
    <dbReference type="PhylomeDB" id="V7AEM8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11393">
        <property type="entry name" value="bHLH_AtbHLH_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000021">
        <property type="entry name" value="Transcription factor bHLH130 family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045239">
        <property type="entry name" value="bHLH95_bHLH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223:SF51">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH117-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH83-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="120"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="52"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="27"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW03288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="190" mass="22122" checksum="0C5E71FDBF7AF040" modified="2014-02-19" version="1">MQPNSAARLPSFRSTPAAWLESVLLKEEEEEEEEQEESEEAEKETLTFTQLLSTIAAPSPSRRQRQRQNYEIQDYPPTSMPIPNPIAPEERDASPPHIKMDMFMFEDSAAPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLHEAVAYVKFLQKQIEELTEHQRRCRCMVQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHA3</accession>
    <name>V7AHA3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G138700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHA3"/>
    <dbReference type="Gramene" id="ESW04944">
        <property type="protein sequence ID" value="ESW04944"/>
        <property type="gene ID" value="PHAVU_011G138700g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="92" mass="10269" checksum="5A792E4DC3DABFDD" modified="2014-02-19" version="1">MDDLNPYEQSVCEFLDNLGVIFETPKILTREYRASDLKKYIEKQMVSSLSKIKLARRLKGIKAPQPSLVADDGGSSPFVVDSKDVERTTSGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHB8</accession>
    <name>V7AHB8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GLTSCR protein conserved domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G016900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHB8"/>
    <dbReference type="STRING" id="3885.V7AHB8"/>
    <dbReference type="Gramene" id="ESW03471">
        <property type="protein sequence ID" value="ESW03471"/>
        <property type="gene ID" value="PHAVU_011G016900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R36Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRPISIQ"/>
    <dbReference type="OrthoDB" id="2556847at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016514">
        <property type="term" value="C:SWI/SNF complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052438">
        <property type="entry name" value="Chromatin_remod/trans_coact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015671">
        <property type="entry name" value="GSCR1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15572">
        <property type="entry name" value="GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15572:SF0">
        <property type="entry name" value="GLUTAMINE-RICH PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15249">
        <property type="entry name" value="GLTSCR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GLTSCR protein conserved" evidence="3">
        <location>
            <begin position="134"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="66"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="315"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="74"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="87"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="339"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="359"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF15249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW03471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="42603" checksum="8A2E91ECF8B4BB0D" modified="2014-02-19" version="1">MEEAKALHQQQQQQQQQLLLQQQQQQHQQHFLLLQQLQKQQHQQQQAAAISRFPSNIDAHLRPIRPLNLQQNPNPNPNPPTNPNPNPIINLHQNPNSNHLPPQQPQQPPQQQQQQQQKIIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEEEEDDRILDSDTTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKRGLGEFRSEERLMIEQALLQEEKRANYELRAELESREKAGREAHEAKLRMAAMFQAEQAQARADLQSHAEMMSRAPMRGSALGSQGNDMVIGHDMGKQDQGGNPGEMINGWGNNTQRDEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHU9</accession>
    <name>V7AHU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G030600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHU9"/>
    <dbReference type="SMR" id="V7AHU9"/>
    <dbReference type="STRING" id="3885.V7AHU9"/>
    <dbReference type="Gramene" id="ESW03641">
        <property type="protein sequence ID" value="ESW03641"/>
        <property type="gene ID" value="PHAVU_011G030600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4210">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIRIVMN"/>
    <dbReference type="OrthoDB" id="439808at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008143">
        <property type="term" value="F:poly(A) binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd12450">
        <property type="entry name" value="RRM1_NUCLs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd12451">
        <property type="entry name" value="RRM2_NUCLs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:001006">
        <property type="entry name" value="Nucleolin 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034349">
        <property type="entry name" value="NUCL_RRM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034350">
        <property type="entry name" value="NUCL_RRM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23236:SF11">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="429"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="531"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="506"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="604"/>
            <end position="693"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="30"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="80"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="112"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="132"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="149"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="163"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="256"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="293"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="316"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="333"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="353"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="378"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="414"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="510"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="3">
        <location>
            <begin position="617"/>
            <end position="673"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="683"/>
            <end position="693"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW03641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="693" mass="72654" checksum="349E3D68E6A767BF" modified="2014-02-19" version="1">MGKSSKKSAVKVDAAPAVVPSSKSAKQGKRQAEEEIEKVIAKKQKIEEVAQKKKKEAKVQKKESSSDDSSSESEDEKPAVKPTAPSKKAPAKNGTGNAPSKKGKPASSSSESSEDSSSDEEEVSAKKPQKVIVEKQKKAAPVPKKESSSEDDSSESEDEKPVPKAAVPSKKAPAKNGALAKKGKTASSSSDSESSEDEKPASKNGAVTAPASKGKPAAVSDSSDSSSDEEDVPKKISSTTKPPASSVAPAKKVESSDDDDSSEEDSDDDNDVKPAAAAVSKHTAVLKKKVDSSDSDDSSSEEEDDKKTAKTVSNAKTLPLSKKPVKSSKTSDSDEESSDSESEEEKQGKKMEIDDDDSSDESEQPQKKAVKSAKENSESSDEDSDEESEEEQSKTPQKRARDVEMVDASAGKKTPNTPITPNAESGASNTIFAGNLAYSVERSDVEDFFKDCGEVVDVRLATDEDGRFKGFGHVEFATVEAAQKALELNGHELHNRPLRLDSARVRDRSSFTPNSSNWNNSSQKSGRGQSQTLFVRGFDKSLGEDEIRSSLEEHFGSCGEVTRVSIPKDYETGAVKGFAYMDFSDADGISKALELHETELGGYTLSVDEAKPRDNQGSGGRGGGGRGGGGRFGGGRGGSGGRFGGSGGGRFGGGRGGSGGRFGGGRGGGGRGRGPPSRSFAAEGKKTKFADED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHX6</accession>
    <name>V7AHX6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G160700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CLV3/ESR signal peptide family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHX6"/>
    <dbReference type="Gramene" id="ESW05202">
        <property type="protein sequence ID" value="ESW05202"/>
        <property type="gene ID" value="PHAVU_011G160700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SGPZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RNDEWHQ"/>
    <dbReference type="OrthoDB" id="1406315at2759"/>
    <dbReference type="PhylomeDB" id="V7AHX6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039617">
        <property type="entry name" value="CLAVATA3-CLE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36016">
        <property type="entry name" value="CLAVATA3/ESR (CLE)-RELATED PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36016:SF14">
        <property type="entry name" value="CLAVATA3_ESR (CLE)-RELATED PROTEIN 53"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0221">Differentiation</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0379">Hydroxylation</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753226" evidence="8">
        <location>
            <begin position="28"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="82" mass="9242" checksum="D6A5195D2498A118" modified="2014-02-19" version="1">MGTSIKRRQLLVIIVIVVTLIVVSSEARTVPQLTTMEKKINSKFGLRELMNNVRNGKWHVKRSMLGGRLERVSPAGPDPDHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AII7</accession>
    <name>V7AII7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G173500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AII7"/>
    <dbReference type="STRING" id="3885.V7AII7"/>
    <dbReference type="Gramene" id="ESW05364">
        <property type="protein sequence ID" value="ESW05364"/>
        <property type="gene ID" value="PHAVU_011G173500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRR2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RVSGCQD"/>
    <dbReference type="OrthoDB" id="10263919at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10338">
        <property type="entry name" value="SH2_SHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.10">
        <property type="entry name" value="SH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000980">
        <property type="entry name" value="SH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036860">
        <property type="entry name" value="SH2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001217">
        <property type="entry name" value="STAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11801">
        <property type="entry name" value="SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55550">
        <property type="entry name" value="SH2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50001">
        <property type="entry name" value="SH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0727">SH2 domain</keyword>
    <feature type="domain" description="SH2" evidence="4">
        <location>
            <begin position="615"/>
            <end position="713"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="417"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="713" mass="80114" checksum="C853A4B53612DAD7" modified="2014-02-19" version="1">MNSDSVGSEGYSLLKDLRLEIEAKDATFSLCFWLYFTSFSTFPVTIIQQVYSDISESAPFLVIDDNKRIHLLPLLLLHEEAPDTGNINSWAEVPHATVDFKFPLEKWVHVECQVFPDYIQLRINGEIIGEKSLCSLLNEKSGSSDLKKLTLANVGGDGNSVQGYVHKFEIFPNISSTKDYHLKDPPLKLSIDESSVSEIEEESDGVWAVVGGKASCRRNFSLDVVLSDAFGQPVDKDNEVFASLLYADTRAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRFFLIRFCVPKLGNYPFLETYSHPIRCISRSRNTRLSTLVWKRSTAHNCSSVSQSSALDDGSLELQHSGHDAQANPLMKRFRFGQDKISVSVKTDPTTLEQPDEECNSHVQTANQVENEFPRSSDGKPANVNEAYDSPSDSESIGEGNSPLNSMASKRYPISDMTIFKYSLASLAERSLILKEIATSASDKEILELANHVSHYSGCSHHGNQILIAKKLIKDGTNLWKVMSPNNHHIPWENAVYEIQEQFMKIACCGSRSLSPQDINLLRRFTGCQEYLTQDNFEKLWCWLYPVAFTISRDWINPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFVLRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSLHQIYGSGDKRVDMKPLQDMLLAEPELSRLGRIIRSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIY0</accession>
    <name>V7AIY0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G159200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIY0"/>
    <dbReference type="STRING" id="3885.V7AIY0"/>
    <dbReference type="Gramene" id="ESW05185">
        <property type="protein sequence ID" value="ESW05185"/>
        <property type="gene ID" value="PHAVU_011G159200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0G0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YAVSHIM"/>
    <dbReference type="OrthoDB" id="1644512at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005776">
        <property type="term" value="C:autophagosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061908">
        <property type="term" value="C:phagophore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053273">
        <property type="entry name" value="CST_Regulator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34659">
        <property type="entry name" value="BNAA05G11610D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34659:SF1">
        <property type="entry name" value="PROTEIN EGT2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="641" mass="71247" checksum="3AA042F418B4FD59" modified="2014-02-19" version="1">MMDLRFKNNNWVGNIYQKFEAVCLEVDDIVGQDAVKYLENQVQNVGDSVKKFYSGVVHELLPFNSLASSKYEDHLLVAETNNIDFSVESVACCKDNNKKRDKKNPINNCYLALMDSNAIDIADYKQAGVLANEESDESCSVSLELEDFCITQEEVGSDSRGTSESKKENFHTSFEEIAVESVPKPMVFMSVGDTESLEFLIHSESSSDTFGSGCEVSIRKKVNIDVNPGKNSCLIAEENVMNSSTSHVLCSQSLDDSNAIDTADIQKGGVHIRHASEVSDESCLVSLDVVDSHISQEEVDDDSRRTSVSTKETIHTSIEEVALESVPKPLNMMSIGDKESLEFPIHSEPCSDSFDYKVSIRTKDNRAVNPRQNSCLIVEEKARNSSMSEVLSSQSLDKEESINVSLFSKSSNADQNTHGILAEVSPDVSVSSERPFSWTEPSCSSSFLTLGSLYSKQLNESCKSNPGDAILCISDGFKVHTCSECSTHLAGLVTEPQGCLVFSGYCQSMESEDKSPVSSIESCMEVIQLNDDLKLEKRCVNVDDGELHAVKRCVNVDDGELHAVAFRTRKLRSYKKRIQDAFTSKKRLSKEYEQLAIWYGDCDIEPSQDFSETLFPLSTRTNMESKNVEEQYDSESEWELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIY2</accession>
    <name>V7AIY2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G190000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIY2"/>
    <dbReference type="Gramene" id="ESW05562">
        <property type="protein sequence ID" value="ESW05562"/>
        <property type="gene ID" value="PHAVU_011G190000g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1669972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34892:SF2">
        <property type="entry name" value="VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED _ V-ATPASE-RELATED _ VACUOLAR PROTON PUMP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="61" mass="6953" checksum="3B7577737393B6A4" modified="2014-02-19" version="1">MDTLPQNINLISCEPMIHISDIKLIRTDTTLDLSQKAEKGMLLTLKVQSFYFLSSGYLSEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIY6</accession>
    <name>V7AIY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SWIM-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G186500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIY6"/>
    <dbReference type="STRING" id="3885.V7AIY6"/>
    <dbReference type="Gramene" id="ESW05519">
        <property type="protein sequence ID" value="ESW05519"/>
        <property type="gene ID" value="PHAVU_011G186500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTYA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHERRHI"/>
    <dbReference type="OrthoDB" id="1703243at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33977:SF2">
        <property type="entry name" value="OS09G0309100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33977">
        <property type="entry name" value="ZINC ION BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04434">
        <property type="entry name" value="SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="3">
        <location>
            <begin position="569"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="700"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="704"/>
            <end position="719"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="719" mass="82891" checksum="F786397D9F0A56B4" modified="2014-02-19" version="1">MAIVESVGKIPLQDPSEEEFGAADLTWTKFGTAEHHDVVALIPYDRVDAFIIGECSNVECPTRFHIERGRKRTIGSLKEYKDDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNTRNRAARPQSMRGCTCHFVVKRLYARPSLALIIYNERRHINKSGFICHGPLDRDAIGPGAKKIPYICNEIQQQTMSMIYLGIPEENILEKHIEGIQRYCGSDAKVSSLASQYVHKLGMIIKRSTHELDLDDQASIRMWIERNRKSVFFHQDTSESDAFILGIQTEWQLQQMIRFGHRSVIAADSTFGVKRLKYPLFTLLVFDSRQHALPVAWVITRSFAKPDVSKWLKALIDRARSVEPGWKVSGFLIDDAAAEIDLLRDIFCCPVLFSLWRVRRSWLRNIVKKCSSIEVQREIFKRLGTIVYSIWGGINTALALEQFMLDFVDQTAFMEYFKTSWLPKLEMWLSTMRNFQLGSQEASGALEAYHVKLKAKLFDDSHLGALQRVDWLVHRLTTELHSSYWLDRYADESDSFQNVKEKYILSTSWHRALQIPDYAVTLDDRDHLFAKVVSQKDSSLLHLVWNPGSEFAFCDCSWSMQGNLCKHVVKVNMICENLKGYQPSMSFRSFEEVLMDLWRKPVDDSFALDLSLACTHQMLDQIQKLVELNNSADIGTVVNNMPLKWVSKKSRTYIGKPSSILALPHGSSNTKSVVVHKKNRKRKRLSRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ34</accession>
    <name>V7AJ34_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G132500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ34"/>
    <dbReference type="Gramene" id="ESW04873">
        <property type="protein sequence ID" value="ESW04873"/>
        <property type="gene ID" value="PHAVU_011G132500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5NK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSHIVFM"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="89" mass="8278" checksum="5E9146DBCFC3329B" modified="2014-02-19" version="1">MARHFVVVDGGDANEGLVLHSPPILLFLMIIASLSMISIIIFACGDDNNNRKRHGGGHGGGGGECGGGGGGDGGGGGGGGCGGGGGGGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJE4</accession>
    <name>V7AJE4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Disease resistance RPP13-like protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G202100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJE4"/>
    <dbReference type="SMR" id="V7AJE4"/>
    <dbReference type="Gramene" id="ESW05702">
        <property type="protein sequence ID" value="ESW05702"/>
        <property type="gene ID" value="PHAVU_011G202100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1733640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000322">
        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.430:FF:000003">
        <property type="entry name" value="Probable disease resistance protein At5g66910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0611">Plant defense</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="9">
        <location>
            <begin position="14"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="8">
        <location>
            <begin position="176"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="10">
        <location>
            <begin position="433"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="11">
        <location>
            <begin position="669"/>
            <end position="801"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="717"/>
            <end position="737"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="121"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="722"/>
            <end position="734"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1072" mass="122766" checksum="2CD29B0F5AFF07E3" modified="2014-02-19" version="1">MAAEFITNALVSTFVETTIDNLASRFGDIFRGKKYKEQLTNLKLKLLALDVVTDDAEQKQFTDPRVREWLLSSKSFVIDAEDLLDEIDNALSKSQVEAQSQGAIKKVFNSLKFSFVSFFKENEIETRIEQIIAVLEDLENRSKILDLKKTDDVGVRSGSRLSSTSLPNETDIYGREHDKQFVFNWLTSDTHNNLSILSIVGMGGVGKTTLAQHVFNDPRMDETNKFDVKAWVCVSDEFDVFKVSKTILEHVTKPTDDDTRDLEMVHRRLKKELTGKKFFLVLDDIWNENQPKWEEVRKPLVFGAQGSRILVTTRSKEVASTMRSEEHSLEQLQEDDCWKLFAKHAFRDDDTQPNQECREIGMKIVKKCKGLPLALKAMGSMLYNKSYVSEWQTVFQSEIWEFSKERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYEFVKEDLIQLWMTENHCRQHRTPEEVCQQYFNDLLSRSFFQQSHEKSHEYKEVFFMHDLLHDLAKYVGGGLYFTCELDQTEKMFGTLCNAESLRTFVSIHSFFGGFKMSIHELFSKFKFIRILSLSHCSDLQWLPDSVANLEHLRSLDLSNTDIKRLNEKICLLSHLQILKLNYCKVLKQLPSNLYLLTNLCRLEFKGTKVTKVPPYLGKLKNLKIVMGSFNVGHDRELGIQRLGELNLEGSLIIQGLQNVENSLDALEADLQNKTHLVALKLAWESDQNSNDSNDRNSNDSKKEEEVIENLQPSKNLKKLSICRYGGKRFPNWLLENSLWNMTSVVLEECKSCERLPPLGLLPFLKFLRIRNLDGIMTIDGDFYGSNSCSFKSLETLDFLFLSRWEKWDCQAGELQLEWGPMKRLTVDSIYDDWLSLRSFPLDLCPTLKMLNLSKIGNLEMISQSLIHNHLEELTLNSCPKFQSLPGSMHLLLPSLRELSIRQCSGLQAFPDGGLPSNLQTLKIQGCLVLDNCSRLVGSLKGAFTDSSSLEWLWIKKVDAKCFPNEGLLPLSLTYLSISDCPNLEKLDSKGLHQLSSLQILYLKNCPNLQRLPEEGLPKSISELDISDCPLLQTSCQKDGGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJH7</accession>
    <name>V7AJH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">U-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G206000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJH7"/>
    <dbReference type="SMR" id="V7AJH7"/>
    <dbReference type="STRING" id="3885.V7AJH7"/>
    <dbReference type="Gramene" id="ESW05742">
        <property type="protein sequence ID" value="ESW05742"/>
        <property type="gene ID" value="PHAVU_011G206000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIIRYPD"/>
    <dbReference type="OrthoDB" id="7537227at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000561">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315:SF238">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315">
        <property type="entry name" value="U BOX DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="3">
        <location>
            <begin position="8"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="331" mass="34552" checksum="FA67973194B4B87F" modified="2014-02-19" version="1">MDQQRRTVRTLVSKLSSVSEAARADALCQLRLMSKQDPETRPVIAEAGAIPYIAETLYSSSHTSQENAAATLLNLSITEKEPLMMTRGVLDAIAHVISHHGTTSSPAAVQSAAAAIHSLLSSVDAYRPVVGAKREIVYSLVDILRCHVSSPPRTIKDALKALFAIALHPLNRATMIGLGVVPALFSLVVKDGRVGIVEDATAVVAQVAGCEEAVEAFCKGSGGLGVLVDLLDLATASSMRSKENAVSALLNLVRCGGEKVAADVRDAVAFGALDGIRDVRDCGSGKGRTKAAELLKVLLGESNGNGNGNVNVVLSSDNCSSFGSSRNHDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJI5</accession>
    <name>V7AJI5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G145700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJI5"/>
    <dbReference type="SMR" id="V7AJI5"/>
    <dbReference type="STRING" id="3885.V7AJI5"/>
    <dbReference type="Gramene" id="ESW05028">
        <property type="protein sequence ID" value="ESW05028"/>
        <property type="gene ID" value="PHAVU_011G145700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YARPREQ"/>
    <dbReference type="OrthoDB" id="439808at2759"/>
    <dbReference type="PhylomeDB" id="V7AJI5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080156">
        <property type="term" value="P:mitochondrial mRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.330:FF:000417">
        <property type="entry name" value="RNA recognition motif-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48029">
        <property type="entry name" value="NUCLEOLAR PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48029:SF1">
        <property type="entry name" value="NUCLEOLAR PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="3">
        <location>
            <begin position="49"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="144" mass="15700" checksum="A6E3CCAAD54BAEF8" modified="2014-02-19" version="1">MATRAAVAAPHVLRRFFCSNSASSSFPFVPTPPLGAVPSPARPTAEPNNNLFVSGLSKRTTTEKLREEFSKFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGHLNNNSPQFGRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJT4</accession>
    <name>V7AJT4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">calcium/calmodulin-dependent protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_011G186900g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.17" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJT4"/>
    <dbReference type="SMR" id="V7AJT4"/>
    <dbReference type="STRING" id="3885.V7AJT4"/>
    <dbReference type="Gramene" id="ESW05525">
        <property type="protein sequence ID" value="ESW05525"/>
        <property type="gene ID" value="PHAVU_011G186900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMIMAGE"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004683">
        <property type="term" value="F:calcium/calmodulin-dependent protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000610">
        <property type="entry name" value="Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000685">
        <property type="entry name" value="Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000249">
        <property type="entry name" value="calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:001455">
        <property type="entry name" value="Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00450">
        <property type="entry name" value="RECOVERIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0106">Calcium</keyword>
    <keyword evidence="12" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="12"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="402"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="438"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="18">
        <location>
            <begin position="480"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW05525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="527" mass="58605" checksum="34A33ED22E335C9E" modified="2014-02-19" version="1">MGYETRILSDEYEVSEVLGRGGFSVVRKGTRKSSSDTKSLVAIKTLRRSGTASSPSYPSGFPRPKGGEKSTAAMMGFPSGRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQDRYSETEAAGVVRQIASGLEAIHRANIVHRDLKPENCLFLDVRRDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQTNRQKQQMIMNGNFSFYEKTWKGITQSAKQLISDLLTIDPSRRPSAQDLLSHPWVVGDKAKDDAMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLRTKKLKSLVGTHDLTAEEIENLRINFKKICVNGDNATLSEFEEVLKAMNMPSLIPLAPRIFDLFDNNRDGTVDMREILCGFSSFKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEECLPADITEPGKLDEIFDRMDANSDGKVTFDEFKAAMQRDSSLQDLLLSSLRPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK09</accession>
    <name>V7AK09_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Serine-threonine/tyrosine-protein kinase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G193900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK09"/>
    <dbReference type="SMR" id="V7AK09"/>
    <dbReference type="STRING" id="3885.V7AK09"/>
    <dbReference type="Gramene" id="ESW05605">
        <property type="protein sequence ID" value="ESW05605"/>
        <property type="gene ID" value="PHAVU_011G193900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWDY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LFCIQAE"/>
    <dbReference type="OrthoDB" id="688481at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27006:SF586">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27006">
        <property type="entry name" value="PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="114" mass="12804" checksum="8FC97B908F251F10" modified="2014-02-19" version="1" fragment="single">MAPEYAMQGLFSVKSDVFSFGVRVLQTICGRKNNGFYLSEHGQTLLLYAWRTWCEGKCLELMDPMLGKCFKASEVEKCIHIALLLTMSDVVVMLGSDNITLPKPKHPTFSVGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL41</accession>
    <name>V7AL41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_010G009400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL41"/>
    <dbReference type="SMR" id="V7AL41"/>
    <dbReference type="Gramene" id="ESW05980">
        <property type="protein sequence ID" value="ESW05980"/>
        <property type="gene ID" value="PHAVU_010G009400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1237">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INDEMKW"/>
    <dbReference type="OrthoDB" id="8904098at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071916">
        <property type="term" value="F:dipeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042937">
        <property type="term" value="F:tripeptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17417">
        <property type="entry name" value="MFS_NPF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044739">
        <property type="entry name" value="NRT1/PTR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000109">
        <property type="entry name" value="POT_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11654">
        <property type="entry name" value="OLIGOPEPTIDE TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00854">
        <property type="entry name" value="PTR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="194"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="379"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="419"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="461"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="500"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="545"/>
            <end position="565"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="600" mass="66948" checksum="8965DF5229E82CE0" modified="2014-02-19" version="1">MEKNKVDGNCEEINDEMKWVLDSSLDHRGRVPLRASTGSWKSSLFIIAIEFSERLSYFGIATSLVLYLTKVIHQDLKTAVKNVNYWSGVTTLMPLLGGFLADAYLGRYSTVIASCIVYLMGLVVLSLSWFVPGLRPCDHTSTCTETRRIHEVVFFLGIYLISIGTGGHKPSLESFGADQFDDNNAKERRQKMSFFNWWNSGLCSGIILGVTVIVYVQDHINWGAAYIILTVVMAISLLIFLIGRPSYRYRSPTGSPLKPMLQVLVAAISKRNLPYPSNPTQLYEVSKVEGNGERCLVHTKKLKFLDKAAIIENEGNIEEKQSPWRLATITKVEELKLIINMIPIWVFTLPFGICAAQTSTFFIKQGAIMNRKIGSGFEVPPASIFTLAAIGMIISVILYDNILVPTFRKLTGNERGISILQRIGIGMVFSVLSMIVAALVERKRLHAVEMNGPIKGSTSMSAFWLAPQFVIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASFLSSLLITIVDDVTGKNGKSWFGKDLNTSRLDKFFWLMAVITSVNLFMFVFFAHKYNYKNVQKLAVADCYEGKNEDDCRADIRVSISEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM20</accession>
    <name>V7AM20_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G003300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM20"/>
    <dbReference type="STRING" id="3885.V7AM20"/>
    <dbReference type="Gramene" id="ESW05913">
        <property type="protein sequence ID" value="ESW05913"/>
        <property type="gene ID" value="PHAVU_010G003300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY48">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WRYMREF"/>
    <dbReference type="OrthoDB" id="1434189at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004158">
        <property type="entry name" value="DUF247_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170">
        <property type="entry name" value="BNAC04G53230D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170:SF20">
        <property type="entry name" value="DUF247 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03140">
        <property type="entry name" value="DUF247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="428"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="456" mass="52956" checksum="80CE0F160D33B937" modified="2014-02-19" version="1">MAQADFSWMIPIEVMLGSLFHGQVQACSISSVTEELRGPNEAAFKPKEVSIGPLHRGITRHLQLMEETKWRYMREFLDRRGTEEQNRRSEQRLRECGTDILKLDKLIIASYGGNIESEPHELAKIMIVDGCFLLELLIRLGDFICNNCSNPNDPILQNHEKVVSVVNDITMLENQVPFIVLKKLFRKVFPDRSDIHNDHRVANIVRRAFGYPEVNNSGGVHVLHLMHLSTVEQTQQEGKRVKQELQRCATRLHAAGITIEAADITGGHEWVDWFNFDITFSGSVLRIPPLCVKETTEVRWRNLIAWEQSRIWIRCKYTSYALFFQGLVCCKHDIELLEEKGVIVNKSRKSKEELLDMFDTISKGAEYMDSSYEDVCDRLNKYRGRKVRSALKKVPIVTWHGFRRVYEIIVYYCRNWYRILIRDHFPTVWKFIGVLAAAALLVLTIMQTYYSSRTKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMU4</accession>
    <name>V7AMU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Methenyltetrahydrofolate cyclohydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_010G060500g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADP(+) = (6R)-5,10-methenyltetrahydrofolate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22812"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMU4"/>
    <dbReference type="SMR" id="V7AMU4"/>
    <dbReference type="STRING" id="3885.V7AMU4"/>
    <dbReference type="Gramene" id="ESW06595">
        <property type="protein sequence ID" value="ESW06595"/>
        <property type="gene ID" value="PHAVU_010G060500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0089">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGCATPK"/>
    <dbReference type="OrthoDB" id="5126881at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004477">
        <property type="term" value="F:methenyltetrahydrofolate cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004488">
        <property type="term" value="F:methylenetetrahydrofolate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009853">
        <property type="term" value="P:photorespiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01080">
        <property type="entry name" value="NAD_bind_m-THF_DH_Cyclohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000006">
        <property type="entry name" value="Bifunctional protein FolD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10860:FF:000005">
        <property type="entry name" value="C-1-tetrahydrofolate synthase, cytoplasmic, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10860">
        <property type="entry name" value="Leucine Dehydrogenase, chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01576">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminoacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000672">
        <property type="entry name" value="THF_DH/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020630">
        <property type="entry name" value="THF_DH/CycHdrlase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020867">
        <property type="entry name" value="THF_DH/CycHdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020631">
        <property type="entry name" value="THF_DH/CycHdrlase_NAD-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48099:SF10">
        <property type="entry name" value="BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48099">
        <property type="entry name" value="C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00763">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02882">
        <property type="entry name" value="THF_DHG_CYH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00085">
        <property type="entry name" value="THFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="Aminoacid dehydrogenase-like, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00767">
        <property type="entry name" value="THF_DHG_CYH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-0601">Photorespiration</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tetrahydrofolate dehydrogenase/cyclohydrolase catalytic" evidence="12">
        <location>
            <begin position="67"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Tetrahydrofolate dehydrogenase/cyclohydrolase NAD(P)-binding" evidence="13">
        <location>
            <begin position="203"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00052194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00058319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00061364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW06595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="355" mass="38845" checksum="98E05FF1EBD7CA03" modified="2014-02-19" version="1">MWTNYLRKRLPLTIRSLHTLKGNQLDQILMSPPLASLDLPDIWSPNPSSRIIPAIHKSFDDHTTIVLDGKLISMEIRSRIAAKVREMKKCLGEIPGLAVILVGQRRDSRTYVRNKIMACEEVGIKSVVTELPTDCAEMDVQNAIMRFNKDPSIHGILVQLPLPEHLDEEKVLDALCIEKDVDGFHPVNMGNLAINGRDPLFTPCTPKGCIELLIRSGVEIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEQITSEADIIVSAAGVPNLVRGNWIKPGATVIDVGTTPVEDSGCDDGYRLVGDVCHEEAIKVASVITPVPGGVGPMTVAMLLYNTLLSAKRMLNFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN55</accession>
    <name>V7AN55_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G101100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN55"/>
    <dbReference type="SMR" id="V7AN55"/>
    <dbReference type="Gramene" id="ESW07097">
        <property type="protein sequence ID" value="ESW07097"/>
        <property type="gene ID" value="PHAVU_010G101100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QEERENC"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45969:SF10">
        <property type="entry name" value="BRASSINOSTEROID-RESPONSIVE RING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45969">
        <property type="entry name" value="RING ZINC FINGER PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="5">
        <location>
            <begin position="131"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23622" checksum="A3EF72E0CEAEBD0C" modified="2014-02-19" version="1">MTPKGFELTLYSQHLYIEDLFEEKRTQTKTVSLTSTYSSPMGFPVGYAEVFFPNPFLHTLAFLGLLRNLVFFLFHLLGLSDFLETEVAWPDPRTSAATAAVSRPPSVSALLIRDILPVAKFGESGENSCACAVCLFEFSEEEEIRCMRNCKHIFHRACVDRWIDHDQKTCPLCRTPFVPDDMLDDYNQRLWAASGINEFYADYTSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANK9</accession>
    <name>V7ANK9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G0858002g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANK9"/>
    <dbReference type="STRING" id="3885.V7ANK9"/>
    <dbReference type="Gramene" id="ESW06900">
        <property type="protein sequence ID" value="ESW06900"/>
        <property type="gene ID" value="PHAVU_010G0858002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0916">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1880850at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="35" mass="3794" checksum="9E1F877F35E47DD8" modified="2014-02-19" version="1" fragment="single">MAFDLYGMLAGNVSPMTGENVKPAYGGEEEAFLRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANV4</accession>
    <name>V7ANV4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">SRP54-type proteins GTP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G093600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GTP-binding SRP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANV4"/>
    <dbReference type="SMR" id="V7ANV4"/>
    <dbReference type="STRING" id="3885.V7ANV4"/>
    <dbReference type="Gramene" id="ESW06995">
        <property type="protein sequence ID" value="ESW06995"/>
        <property type="gene ID" value="PHAVU_010G093600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0780">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GISDQFQ"/>
    <dbReference type="OrthoDB" id="1727884at2759"/>
    <dbReference type="PhylomeDB" id="V7ANV4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005047">
        <property type="term" value="F:signal recognition particle binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="FtsY"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
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        <property type="entry name" value="Signal recognition particle SRP54, nucleotide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
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        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004390">
        <property type="entry name" value="SR_rcpt_FtsY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
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    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00064">
        <property type="entry name" value="ftsY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134:SF7">
        <property type="entry name" value="CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134">
        <property type="entry name" value="SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="Domain of the SRP/SRP receptor G-proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
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    </dbReference>
    <dbReference type="PROSITE" id="PS00300">
        <property type="entry name" value="SRP54"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0675">Receptor</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SRP54-type proteins GTP-binding" evidence="7">
        <location>
            <begin position="344"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW06995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="39910" checksum="CCAF4CFEC4A800E7" modified="2014-02-19" version="1">MATISASLARFCVISRPSSNSQYILFNVAPRTGTPNSRTGSARFRCSAGQTGFFTKLGRLIKEKAKSDVEKVFSGFSKTRNNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPKITIKIVENLREDILSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILLAAGDTFRAAASDQLEIWAERTGCEIVMAESEKAKASSVLSQAVKKGKQLGFDVVLCDTSGRLHTNYSLMEELISCKKSVAKVIPGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDADAFVNAIFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP12</accession>
    <name>V7AP12_PHAVU</name>
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        <recommendedName>
            <fullName evidence="3">MATH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G097900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP12"/>
    <dbReference type="SMR" id="V7AP12"/>
    <dbReference type="STRING" id="3885.V7AP12"/>
    <dbReference type="Gramene" id="ESW07050">
        <property type="protein sequence ID" value="ESW07050"/>
        <property type="gene ID" value="PHAVU_010G097900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1863">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REATDWY"/>
    <dbReference type="OrthoDB" id="2116871at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd00121">
        <property type="entry name" value="MATH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.210.10">
        <property type="entry name" value="Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A"/>
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    </dbReference>
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        <property type="entry name" value="MATH/TRAF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050804">
        <property type="entry name" value="MCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008974">
        <property type="entry name" value="TRAF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46236:SF36">
        <property type="entry name" value="MATH (MEPRIN AND TRAF-C-LIKE) DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46236">
        <property type="entry name" value="TRAF-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22486">
        <property type="entry name" value="MATH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49599">
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MATH" evidence="3">
        <location>
            <begin position="12"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="263"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW07050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="298" mass="34671" checksum="FEE5558509BD3CD0" modified="2014-02-19" version="1">MGNNKKRLKLMFEKYTWNITNFSKVFSFQLFSDKFILDGQTWQIFITLIPSKDDYLEIYLKADTESSNLRVGWEKAANFRFAVINQVNDKMTIRKGYDYASGNSCFGHISSSHGLKDPGSGFIVNDTCVIEVGTFVTKYVDENKEYQPVCKIDDNPTKDNNNPLLHEMFRSSYEKIEEDFVPLLVEACSQHPSLVVSQEKRSCRFTEWAFTALGRVLHFLNTKKLKDMDEEACNHLQILWDELKTCGFDLTWLEFYVESALNVKDYMENVDEMRKSLSALKIETDKLKARLIERETQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASB0</accession>
    <name>V7ASB0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MULE transposase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G024500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASB0"/>
    <dbReference type="STRING" id="3885.V7ASB0"/>
    <dbReference type="Gramene" id="ESW08170">
        <property type="protein sequence ID" value="ESW08170"/>
        <property type="gene ID" value="PHAVU_009G024500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSE3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHYYSED"/>
    <dbReference type="OrthoDB" id="1428231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973:SF195">
        <property type="entry name" value="MUDR FAMILY TRANSPOSASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31973">
        <property type="entry name" value="POLYPROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MULE transposase" evidence="1">
        <location>
            <begin position="114"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="50867" checksum="E929F860349A8905" modified="2014-02-19" version="1">MQMDTWNVGGTSLSRHEELITRDIVDDISEDGDNYDLDLDDEDQFNRSSQYIPSDMWLGAYIMMEGVNGDCVHLLYASPCMVDGVQDKSCYKLDRVFWSFKPCIDGFNFCKPIVQVDGTFLNGRYSGTLLTATAQDGNRNIFPLAFAIVEGETQEALIWFFQLLRQYVTPQPNLCMITDRGISIISVLQSEEVGWEGDNLVSVYCIHHIASNFNKKFKNVELKRQLINMDRIPLEKWTQAYDGGKRYGHMTTNLVECINFVLKEARSLLISALVKATFEKTKTWFVERVFKIDTMLRACHYYSEDITTLLRKNQQHSAMCFVERFNAKNSEFDVQELATPQHAFRLPCRHVIVVCSSCHLQMTTFIDPVYNLHTIRKAYQVEFHPIRNEDYWSTYTGPNFIPEPHMRRKNSGQPITTRLRNEIDQSIQNKTKKMVLLSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATD5</accession>
    <name>V7ATD5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G084800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATD5"/>
    <dbReference type="SMR" id="V7ATD5"/>
    <dbReference type="STRING" id="3885.V7ATD5"/>
    <dbReference type="Gramene" id="ESW08912">
        <property type="protein sequence ID" value="ESW08912"/>
        <property type="gene ID" value="PHAVU_009G084800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKMRCKE"/>
    <dbReference type="OrthoDB" id="420187at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02661">
        <property type="entry name" value="Peptidase_C19E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000026">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="6.10.140.2220:FF:000006">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF677">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01360">
        <property type="entry name" value="ZF_MYND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 11" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="14">
        <location>
            <begin position="73"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="USP" evidence="13">
        <location>
            <begin position="182"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="618"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="688"/>
            <end position="727"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="625"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="715"/>
            <end position="727"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW08912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="727" mass="81082" checksum="88FC925B8E4C370A" modified="2014-02-19" version="1">MLASLVSSPSWDLKWLLQFVFSAFVLAMGLHALVKNTASKYFEVDATFEGEHHQQHHHRHDAMPGLPMDDSVCAVCRNPGSKKCSRCKSVRYCSQACQQAHWQSEHKMRCKEFQMQGVSQTGLTNRGFKASAAVNRSTTSIALIPECGRGISRPIKQPKDVLFPYDDFVNLFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRSECCHNDWCFLCEFETHVEKARLSSKAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDAMQSVCLDEFGGEKAVPPKHQETTLIQHIFGGHLQSEVICTECDKNSNQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCKDYVKAWKRLTVKRAPNILTIALKRFQSGRFGKLNKRVAFPETLDLCPYMSEVGDGSDMYKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWKVVRVELEEVLSQGAYMLLYSRVHARASGLQSIVSSETAEVQPSPTKQAKCLLELKTDTYSGGCESSPSNSSPEVMVLCENMPLTEMDSGVKREQLKDVEIIDVNANGSVCNGVDTSNMHGFEAVKDLGDVEDSDESNTCSSVLEEISVCMEEQDDSDLAKSSPTSCLPNGSSVSLDYENAREDSDSNDVDAIRSRVTANGFANHSNGYVSANKYDDVPVEDGDVSFSTETTPSAEKHQFKGRLGSDNYEGDKGNRVTKVEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW90</accession>
    <name>V7AW90_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="4">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_009G082500g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW90"/>
    <dbReference type="STRING" id="3885.V7AW90"/>
    <dbReference type="Gramene" id="ESW08883">
        <property type="protein sequence ID" value="ESW08883"/>
        <property type="gene ID" value="PHAVU_009G082500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTEP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MIYLRLE"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048827">
        <property type="term" value="P:phyllome development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090567">
        <property type="term" value="P:reproductive shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010103">
        <property type="term" value="P:stomatal complex morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000290">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000288">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000077">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000107">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000219">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27000">
        <property type="entry name" value="LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27000:SF444">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="17" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="12" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="11 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="9 19" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754172" description="non-specific serine/threonine protein kinase" evidence="19">
        <location>
            <begin position="21"/>
            <end position="958"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="625"/>
            <end position="895"/>
        </location>
    </feature>
    <feature type="binding site" evidence="18">
        <location>
            <position position="654"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW08883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="958" mass="105633" checksum="8F715831E08DDD8D" modified="2014-02-19" version="1">MAFWIGLLLVLLLCLDSVNSQDGATLWEMKKSLRDVDNVLFDWTDTPSSDYCLWRGVTCDNVTYNVVALNLSGLNLEGEISPALGRLSSLVSIDLKENRLSGQIPDELGDCSSLKNVDLSFNEIRGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLMGSLSPDICQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLDLSYNKLSGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNLLSGPIPHILGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPSNLSSCKNLNSLNVHGNKLSGTIPSSLQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISKNNIVGSIPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMIYLRLEKNKLSGDVSSLVNCLSLSLINVSYNNLVGVIPTSNNFSRFSPDSFIGNPVNLSKAAILGIALGTLVILFMVLFAACRPHNPAPFPDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRITENLSEKYIIGYGASSTVYKCILKNCNPVAIKKLYSHYPQCLKEFETELETVGSIRHRNLVSLQGYSLSPFGNLLIYDYMENGSLWDLLHGPSKRKRLDWDVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVENESNLHHLILSKTASDAVMETVDPDISATCKEMIAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKESVPTMQVLIPPSRPSAKTQSYKDEYANLKAPHLVNCPSISTSDAQLFLKFGEVISQNSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX14</accession>
    <name>V7AX14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DCD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G161200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX14"/>
    <dbReference type="Gramene" id="ESW09845">
        <property type="protein sequence ID" value="ESW09845"/>
        <property type="gene ID" value="PHAVU_009G161200g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1920894at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013989">
        <property type="entry name" value="Dev_and_cell_death_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46444:SF7">
        <property type="entry name" value="DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46444">
        <property type="entry name" value="DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10539">
        <property type="entry name" value="Dev_Cell_Death"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00767">
        <property type="entry name" value="DCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51222">
        <property type="entry name" value="DCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DCD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="195"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="200"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="233"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="414" mass="47429" checksum="5323A10AB919D31E" modified="2014-02-19" version="1">MATSTGKLEIEPLAFGHKFPAQVKFKIYKDCLPLPESSFKLVIRDNYQKGSNKFNPELNIRQVRSLIELFRPLHELPTSPTLPFLKKPMNSVYHHISGPPLSEHAHLSRMAPNQAPMLLSYQHVNQLGERTGRAYPVHNIMPCSAAAQPVPSQTSRNQFYEQTFLNDCGHANTFQFSQHAHHNVIHPQPEFHYSLMPVGSSHTQSLQDPQYPYQSISNPQSLEDPQHPYQSIPNPQLLQNPQYPYQSISNPQSLQDPQHPYQSIPNPQLLQDPQYQYQSIPSSQLLQDPQYQYQSIPNSQFLQDPQYQYQSIPNSQLLQDPQYQYQDQSIPNSQLLRDPQYPYGSIPKPSHDFHPTVANAGSRHTLLSWGPHYTHQNMPNSQPDIYSTTLNAGHGYDQSLPDHQVWSHARGDIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYE6</accession>
    <name>V7AYE6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein LURP-one-related 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G226800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOR family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW10647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYE6"/>
    <dbReference type="SMR" id="V7AYE6"/>
    <dbReference type="STRING" id="3885.V7AYE6"/>
    <dbReference type="Gramene" id="ESW10647">
        <property type="protein sequence ID" value="ESW10647"/>
        <property type="gene ID" value="PHAVU_009G226800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSUY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGESTSC"/>
    <dbReference type="OrthoDB" id="1916253at2759"/>
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        <property type="component" value="Chromosome 9"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="LOR_sf"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087:SF3">
        <property type="entry name" value="PROTEIN LURP-ONE-RELATED 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04525">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Tubby C-terminal domain-like"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="204" mass="22714" checksum="EF022355C983700A" modified="2014-02-19" version="1">MSMMPVISKLYCSSSQTVLGVRRRPHVVNGGGFVVTDCTGQRVVFRVDGCGIHGTKEHLILRDGEGDALLLVRRKGGMFEALSIYKKWKGYSLNYEGSQTLVFSLKEPNSCFVKNNGIRISIEPRAASNKGWDFEIRGYFPDRNCSIVDIRGNVIAQVGVNKEVEKLMESKDLYNVVVKPGMDQTFVFGVIAVLDYIYGESTNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYK5</accession>
    <name>V7AYK5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G147400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYK5"/>
    <dbReference type="STRING" id="3885.V7AYK5"/>
    <dbReference type="Gramene" id="ESW09683">
        <property type="protein sequence ID" value="ESW09683"/>
        <property type="gene ID" value="PHAVU_009G147400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RESI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MADYETH"/>
    <dbReference type="OrthoDB" id="1896453at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36363">
        <property type="entry name" value="OS04G0687200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36363:SF1">
        <property type="entry name" value="OS04G0687200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="172"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="196" mass="23052" checksum="7BF86EDF8303262E" modified="2014-02-19" version="1">MADYETSHNHNHNHNHHQQQPVSKETAFQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQIFFIFLALLFLAQSQSSRLQCRHCWIPITLLSIAHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATEKLREIKIRLSAANGDYEGVADEEFEIHYQEPPESYFGKFKRNWALHFGFLILIYAFMISSSVVLLCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="66" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ03</accession>
    <name>V7AZ03_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">Histone-lysine N-methyltransferase ASHH2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G130100g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
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        </subcellularLocation>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7AZ03"/>
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        <property type="gene ID" value="PHAVU_009G130100g"/>
    </dbReference>
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    </dbReference>
    <dbReference type="OMA" id="DRNGWGC"/>
    <dbReference type="OrthoDB" id="422362at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046975">
        <property type="term" value="F:histone H3K36 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19172">
        <property type="entry name" value="SET_SETD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.270.10:FF:000035">
        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.100:FF:000006">
        <property type="entry name" value="Histone-lysine N-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006560">
        <property type="entry name" value="AWS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050777">
        <property type="entry name" value="SET2_Histone-Lys_MeTrsfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044437">
        <property type="entry name" value="SETD2/Set2_SET"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011124">
        <property type="entry name" value="Znf_CW"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22884">
        <property type="entry name" value="SET DOMAIN PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17907">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07496">
        <property type="entry name" value="zf-CW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00570">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51215">
        <property type="entry name" value="AWS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51050">
        <property type="entry name" value="ZF_CW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CW-type" evidence="14">
        <location>
            <begin position="975"/>
            <end position="1029"/>
        </location>
    </feature>
    <feature type="domain" description="AWS" evidence="15">
        <location>
            <begin position="1089"/>
            <end position="1139"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="12">
        <location>
            <begin position="1141"/>
            <end position="1258"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="13">
        <location>
            <begin position="1266"/>
            <end position="1282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="465"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="770"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="847"/>
            <end position="915"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1344"/>
            <end position="1364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1393"/>
            <end position="1469"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1673"/>
            <end position="1699"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1742"/>
            <end position="1761"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="466"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="777"/>
            <end position="789"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="847"/>
            <end position="866"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="887"/>
            <end position="902"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="1393"/>
            <end position="1407"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="1408"/>
            <end position="1419"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="1420"/>
            <end position="1440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="1447"/>
            <end position="1458"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="1459"/>
            <end position="1469"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="1673"/>
            <end position="1682"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="1683"/>
            <end position="1694"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW09471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="18">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2017" mass="220976" checksum="4D09C52E28197FA8" modified="2014-02-19" version="1">MIEMGSCGRSVTANDRSGGSVIEQHLCSEVAEQVVSVQESCLEEACNVVDSNADLSTVTDGCVGEDLVGSARCLGEGSCDALGLASECENADLLSLEKTTEDDYLNCLGVSYGGIEVPCESSVFEGNVQGEGNFDLRSRSLTTDDSQRLCSQQSPATGNQSVVVEGEIDDTGLGDAFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVENCDALIGTEAAACRQISPTLDMEVPSGALCADTEVESTSDLKDGEDQNSTCEEKAKDFVDEEIIFINSCVKISSSPGCHGTVDSSSVDSPCEPALLDAGREMKNAVLQIEDAFCKLKDCSSEETSNSTFRKPSSPESGMPSVASIANFSSKDVSDFHCKGDDVGNSTFRKPSTPESGLPSVASIANCSSKDVSDLHCNGDVSTTTTIATNNAVDDLGQMDNDGKEAVEVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTCPNGDYMKLYSEAARKKRSCFSKPARSSIWGSIGNIEQFFEQDNERAVGEAVCQLGKARSKRQSGKAVKNKASTGSLSSVQKCPISTSRVRLKIKFGKEPDLCCSNVLSPDSVEGLASASHLESGSASEKIACNLEDKMLKVVTLGNSESFNNDLDKDDLVRNEQVANSPLEENTEITEKADGDVEEHCLAVPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEIQVVERHQEDLHDAVLGSSKELNSKLDATISRRGKKKDKLICSGICITEDECQGPPRNSRGKQSKNRRGKKNCRDAVSSLELSTFTQMTKSVSSKELCPESLSLSGETELGGSSEALKVKNDMISGKQSVDNGFSESQVSENMLSSATPLGRKLPKSLKPSKVSRTKFKASDSADRKKTTCTRKEKQKKPINKSEVKRKGASLKITCEMEDRPHADANIGNYKLDAVGKINAEDNKVSVNISKLDTLSGVELGGQLPSPRNAWVRCDDCYKWRRIPAVLADLIDETNRTWTCKDSSDSAFADCAVPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFVSQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKASQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYANLRWFKCGKKGYGLKALGNVAQGQFLIEYVGEVLDMHTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCSSPSCRGYIGGGDPLNADLIVQSDSEEEFPEPVMLSKDGKIEDAVPIPKYFSNVDTQSARNMLKGRDILEKSTTAIDSDGSPEKESSVNPASAVSLLHSPAEMEDSKGKLPFSVEVEEISQQMEDVTSKPMSTEQGYEKEKESEFADKTSSTQRLETTSPLTTASKMLSNSGSNKESKSEIIEGRKNSKLKSSVKKGKVHANLPNGLKAEVSANRLQLSSVKHKKLEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESNRSFSGSRFSASHSHRPEQDLRAAEVIDCSQQSMLGTTPVDADTQESCPAHSLDGVEIKGAKKRKRKSRWDQPAETNSLSDAVMSSIGESQNIHEDVPPGFSCPIGPLNASALNSGNLVLQNASRSGCPSDSVVGHSKRKFNSRLPVAYGMPWSVAHQYGTPHTEFPERWVTAPGIPFIPFPPLPPYPRDNKDCQPSNNNSAMIIDLPAEAMISDQSAEVKEGHNSSMVSCCADDMIPSTTGANPEESNLLFEENEAKRMKGDSHDLVRKYYKQQKWNNSKIHRPWFQRNAWKCNENNSSGDMCSIDVDLPKESEDTCDAENAICREEKGGNNIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0Y4</accession>
    <name>V7B0Y4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Magnesium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G033900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Magnesium transporter that may mediate the influx of magnesium.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0Y4"/>
    <dbReference type="SMR" id="V7B0Y4"/>
    <dbReference type="STRING" id="3885.V7B0Y4"/>
    <dbReference type="Gramene" id="ESW11484">
        <property type="protein sequence ID" value="ESW11484"/>
        <property type="gene ID" value="PHAVU_008G033900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2662">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FWETTCG"/>
    <dbReference type="OrthoDB" id="10251508at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015095">
        <property type="term" value="F:magnesium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd12823">
        <property type="entry name" value="Mrs2_Mfm1p-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.340">
        <property type="entry name" value="Magnesium transport protein CorA, transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039204">
        <property type="entry name" value="MRS2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13890:SF35">
        <property type="entry name" value="MAGNESIUM TRANSPORTER MRS2-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13890">
        <property type="entry name" value="RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22099">
        <property type="entry name" value="MRS2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0406">Ion transport</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="271"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="126"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU366041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW11484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="290" mass="33588" checksum="F62332E0401B7460" modified="2014-02-19" version="1">MLDGEEKQTATGKGEWLLLDGKGEMELVEAGRDAIMRRTGLPARDLRRFLSYHSILLGRERVIVINLEHVKAIITVQEVLFHNSGYPSVTPFVHELQAWILRHHQDSSSSNPDAIKILPFEFVALHGCLEAVCSVLENEAKTLEQETHSALDKLTSNTLNLERIRQIMIRLVHITERVQKVRNKLEHLLEDDKDMAEMYLTEKLVNGGNTYSAVTKQLDVEDLKMFFKDYFVQMDDTLKKLSMLRNYVVLNEAHIRNELTYLQNIFFRVQVLWWAASMVLGGLLIWHPWH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1G8</accession>
    <name>V7B1G8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">heme oxygenase (biliverdin-producing)</fullName>
            <ecNumber evidence="3">1.14.14.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G198100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the heme oxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.18" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G8"/>
    <dbReference type="SMR" id="V7B1G8"/>
    <dbReference type="STRING" id="3885.V7B1G8"/>
    <dbReference type="Gramene" id="ESW10306">
        <property type="protein sequence ID" value="ESW10306"/>
        <property type="gene ID" value="PHAVU_009G198100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4480">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKNKTWS"/>
    <dbReference type="OrthoDB" id="652091at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004392">
        <property type="term" value="F:heme oxygenase (decyclizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006788">
        <property type="term" value="P:heme oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010024">
        <property type="term" value="P:phytochromobilin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd19165">
        <property type="entry name" value="HemeO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.910.10:FF:000005">
        <property type="entry name" value="Heme oxygenase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="entry name" value="Heme oxygenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002051">
        <property type="entry name" value="Haem_Oase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016053">
        <property type="entry name" value="Haem_Oase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016951">
        <property type="entry name" value="Haem_Oase_decyc_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35703">
        <property type="entry name" value="HEME OXYGENASE 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35703:SF2">
        <property type="entry name" value="HEME OXYGENASE 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01126">
        <property type="entry name" value="Heme_oxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030219">
        <property type="entry name" value="Heme_Oase_decyc_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="Heme oxygenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="6" id="KW-0349">Heme</keyword>
    <keyword evidence="11" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="7" id="KW-0934">Plastid</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW10306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="31766" checksum="97F553260E7D50D6" modified="2014-02-19" version="1">MASLIALSQTQLLYIKPRIVSPPNQSRSFFLPTGLPSEVRGLRATMPRKTVIVSAATAETPKKKGESKGFVEEMRFVAMRLHTRDQAREGEKEVKQPEEKAVTKWDPTVEGYLKFLVDSKVVYDTLEDIVQEAPHPSYAEFRNTGLERSESLKEDLEWFKENGHTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKVGEKLLDSKALKFYKWDGDLPQLLQNVRDKLNKVAEDWSREEKDHCLEETEKSFKLSGEILRLILS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1J0</accession>
    <name>V7B1J0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_008G030200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1J0"/>
    <dbReference type="SMR" id="V7B1J0"/>
    <dbReference type="Gramene" id="ESW11440">
        <property type="protein sequence ID" value="ESW11440"/>
        <property type="gene ID" value="PHAVU_008G030200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HREVTFF"/>
    <dbReference type="OrthoDB" id="1720310at2759"/>
    <dbReference type="PhylomeDB" id="V7B1J0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004714">
        <property type="term" value="F:transmembrane receptor protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010038">
        <property type="term" value="P:response to metal ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000003">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000007">
        <property type="entry name" value="FERONIA receptor-like kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000252">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000645">
        <property type="entry name" value="Receptor-like protein kinase FERONIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045272">
        <property type="entry name" value="ANXUR1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024788">
        <property type="entry name" value="Malectin-like_Carb-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590">
        <property type="entry name" value="OS03G0124300 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34590:SF15">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12819">
        <property type="entry name" value="Malectin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 15" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756143" description="Protein kinase domain-containing protein" evidence="15">
        <location>
            <begin position="24"/>
            <end position="864"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="444"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="513"/>
            <end position="788"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="414"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="542"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW11440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="864" mass="96795" checksum="6DBA708635EFE507" modified="2014-02-19" version="1">MDTTCMATILFLLLLCHPYLSTADVIYRPVEHFTVNCGSDINFSVDGRNWTGDSNTKFLSESKDSVAAPAQIQSTTQGPYTYARLSYSQFTYSFPVTTQGPFFLRLFFYSTSYQMFDRSKAYFSVQAGPYTLLQHFNASLYADTDDDPGHHDTLFREYCIYLQHGESLNITFTPTTTDSYAFINGIEIVSMPSYLYYSNPNYTVLDDFIGLPQLVGQMNQVYIITNNVSLETKHRLNVGGAQISPSQDTGMLRAWDTDDKYLITDSGTSVDFIKKTNLSFVKTPNYTAPDQVYRTVRNIGLNPFKNLTWQFPVYSGFFYLLRLHFCQLNPEVQDPGNQIFYIFIQKLMAEGGADILMWSDNQKGVPVVKDYAVYIPGNREKVYLSLEMHPHPKSFIQDAQLNAIELFKINDTTGSLAEPNPDPLPKTLDKQIPEQKSSGTTRPLIAAIAGAVFGVVLLSFIVVFFITKCKQNVVVYKNQKDGTSRGGGSSSSLPTNLCRHFSIAEIRAATNNFDKLFVIGAGGFGDVYKGYIDDGSTPVAIKRLKPGSQQGLNEFMNEIEMLSKLRHVHLVSLIGYCYESNEMILVYDLMDRGTLRDHLYGTDNPPLSWNQRLQICIGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPMGSLMTHVSTQVKGSIGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVEKPQVSLVDWAKHWYEKGSLGDIVDPALKGQIAPHCLRKFGEVALSCLLEDGTQRPSMNDVVGVLEFVLRLQLQNSANVNAVLESGGDYEDSSTEDMFSSTHTSVHASDYSNSSGFNSTTYGSKASDRLISELVFSEIKDPKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1Q5</accession>
    <name>V7B1Q5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Membrane-anchored ubiquitin-fold protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G035500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">May serve as docking site to facilitate the association of other proteins to the plasma membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1Q5"/>
    <dbReference type="SMR" id="V7B1Q5"/>
    <dbReference type="Gramene" id="ESW11500">
        <property type="protein sequence ID" value="ESW11500"/>
        <property type="gene ID" value="PHAVU_008G035500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZYK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPKETEN"/>
    <dbReference type="OrthoDB" id="1043111at2759"/>
    <dbReference type="PhylomeDB" id="V7B1Q5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd01814">
        <property type="entry name" value="Ubl_MUBs_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017000">
        <property type="entry name" value="MUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040015">
        <property type="entry name" value="UBL3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039540">
        <property type="entry name" value="UBL3-like_ubiquitin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13169:SF25">
        <property type="entry name" value="MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13169">
        <property type="entry name" value="UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13881">
        <property type="entry name" value="Rad60-SLD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032572">
        <property type="entry name" value="MUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0564">Palmitate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UBL3-like ubiquitin" evidence="8">
        <location>
            <begin position="6"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR032572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="12783" checksum="C8860EF78B1B3590" modified="2014-02-19" version="1">MAGNQDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKDKENGPRTIKDVKLISAGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEKEKKAANKATQNKCMCIIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2D0</accession>
    <name>V7B2D0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PRC-barrel domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G0815001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2D0"/>
    <dbReference type="STRING" id="3885.V7B2D0"/>
    <dbReference type="Gramene" id="ESW12062">
        <property type="protein sequence ID" value="ESW12062"/>
        <property type="gene ID" value="PHAVU_008G0815001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTM7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YTFCINS"/>
    <dbReference type="OrthoDB" id="539916at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36740">
        <property type="entry name" value="PRC DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36740:SF1">
        <property type="entry name" value="PRC-BARREL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="PRC-barrel domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="325" mass="35771" checksum="D29807045D271248" modified="2014-02-19" version="1" fragment="single">MTDFLATNPLTLSAAESPRFPFLNSRQTPTPRTQLNPNYRVPFSSKPSKTSCDNKSVSWALSSRSNEDPSRGYGFYNELEFEDIKEKTFGLERNPVGADSPTASGSVPFDEVEGADDKGEGDLVRVQGDADGDGDDLKKDDSVDQGENEKFGGKRVRRGKQVIRRSNLLAKQVISIRSALSMGFVSQLWVDTTSWMVLFVEVRPNLLSGDSEKFLLEDISQVGDVILVQDESVVDNEFKMIGLETLVGYKVVTPSRRNIGKVRGYTFCINSGAVEELELDSFGLSIIPSSLVSTYSLLVEDVLEVVSDAVVVHEAAALRIQRLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2Q3</accession>
    <name>V7B2Q3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G064300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2Q3"/>
    <dbReference type="SMR" id="V7B2Q3"/>
    <dbReference type="Gramene" id="ESW11855">
        <property type="protein sequence ID" value="ESW11855"/>
        <property type="gene ID" value="PHAVU_008G064300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7CQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAVPFRT"/>
    <dbReference type="OrthoDB" id="1430548at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="113" mass="13585" checksum="A32A3A182C9745BD" modified="2014-02-19" version="1">MLTLTWADTHVFITNSLEGKEDLHIHCKSKDDDLGPHVLRINQTFKITFEPNYFFGTLFFCSFQWGNCPFLYYDVYNQGKDYYKCDDDCTWYVHKDGPCRYEFQARKCYAWNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B353</accession>
    <name>V7B353_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Chlorophyll synthase, chloroplastic</fullName>
            <ecNumber evidence="12">2.5.1.62</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Polyprenyl transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_008G096500g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>phytyl diphosphate + chlorophyllide a + H(+) = chlorophyll a + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:17317"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58416"/>
            <dbReference type="ChEBI" id="CHEBI:75434"/>
            <dbReference type="ChEBI" id="CHEBI:83348"/>
            <dbReference type="EC" id="2.5.1.62"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the UbiA prenyltransferase family. Chlorophyll synthase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.62" evidence="12"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B353"/>
    <dbReference type="STRING" id="3885.V7B353"/>
    <dbReference type="Gramene" id="ESW12244">
        <property type="protein sequence ID" value="ESW12244"/>
        <property type="gene ID" value="PHAVU_008G096500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQMP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QDMYFLR"/>
    <dbReference type="OrthoDB" id="434972at2759"/>
    <dbReference type="PhylomeDB" id="V7B353"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046408">
        <property type="term" value="F:chlorophyll synthetase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13958">
        <property type="entry name" value="PT_UbiA_chlorophyll"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.357.140:FF:000015">
        <property type="entry name" value="Chlorophyll synthase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1780">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006372">
        <property type="entry name" value="Chl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011799">
        <property type="entry name" value="ChlG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050475">
        <property type="entry name" value="Prenyltransferase_related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02056">
        <property type="entry name" value="ChlG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01476">
        <property type="entry name" value="chlor_syn_BchG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005742">
        <property type="entry name" value="PRK07566.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42723">
        <property type="entry name" value="CHLOROPHYLL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42723:SF1">
        <property type="entry name" value="CHLOROPHYLL SYNTHASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="8 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="5 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="176"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="200"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="227"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="256"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="325"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="55"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00051674"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00061552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00066520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00068061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00080729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW12244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="377" mass="40948" checksum="BF0E05CA8F9474EB" modified="2014-02-19" version="1">MASLLNIVSVPPRISPPSHTRTLSLQARPVLPPFSLSFSRRRLSIRATETDTNEVKSQPPSTAPSKAGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVAKSIVCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGISLAGILDIWAGHDFPIVFYLSVGGALLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGADKPLYALALLALIIPQVIFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7A1</accession>
    <name>V7B7A1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G105200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7A1"/>
    <dbReference type="STRING" id="3885.V7B7A1"/>
    <dbReference type="Gramene" id="ESW12351">
        <property type="protein sequence ID" value="ESW12351"/>
        <property type="gene ID" value="PHAVU_008G105200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU51">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CREDKPQ"/>
    <dbReference type="OrthoDB" id="1929779at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043622">
        <property type="term" value="P:cortical microtubule organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949:SF15">
        <property type="entry name" value="ENDOCHITINASE A-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949">
        <property type="entry name" value="GASTRIC MUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="89"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="394"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="457"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="147"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="197"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="228"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="271"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="309"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="339"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="396"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="410"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="457"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="477"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="500"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="509" mass="54611" checksum="17A5CCE1B02ED5E8" modified="2014-02-19" version="1">MVMKERDEELSLFLEMRRREKENEKNSLLLLQNSEELDLSNLESNHGGSMNSKIVSSVPPRKNGVEEFLNSENDKSDYEWLLAPPDAPLFPTLEKESQISVKSEQETRNARPTALKPRVSNIQAEPASRSNIVSKHHASMPGIGSFTSGRRPSSSGAPTSATSRSSTPSGRPTLPSTAKSSRPSTPISRATLTSAKSSVPPVRSSTPSRSTSRSSTPTNTRPSLAPPKTSQRSATPTLRSSTPSKAFGVSAPTRPSSASKARPGPAVAKNVVQSRGSSPSVRSRPWEPSQMPGFSHDAPPNLKTSLIDRPASATRTRPAAPNSRSSSVEPSSNGKSRRQASTPSKGRTSTGLVHNNHTSMQVLSRARFTDANDESPVVIGTKMVERVVNMRKLAPPKHDDHHSSRDNAYGKSSSGTSGFGTTLSKKSLDMAMRHMDIRRSIQGNLRPLVTSIPASSMYSVRSGSSSKSRTMSVSDSPLATSSTTSSEPSVNNNSMSYGSEIEENDFGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8D1</accession>
    <name>V7B8D1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 14">Folylpolyglutamate synthase</fullName>
            <ecNumber evidence="3 14">6.3.2.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 14">Folylpoly-gamma-glutamate synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 14">Tetrahydrofolylpolyglutamate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_008G230100g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13 14">
            <text>(6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)(n) + L-glutamate + ATP = (6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)(n+1) + ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10580"/>
            <dbReference type="Rhea" id="RHEA-COMP:14738"/>
            <dbReference type="Rhea" id="RHEA-COMP:14740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:141005"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>a monovalent cation</name>
            <dbReference type="ChEBI" id="CHEBI:60242"/>
        </cofactor>
        <text evidence="14">A monovalent cation.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 14">Cofactor biosynthesis; tetrahydrofolylpolyglutamate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the folylpolyglutamate synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.17" evidence="3 14"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8D1"/>
    <dbReference type="SMR" id="V7B8D1"/>
    <dbReference type="STRING" id="3885.V7B8D1"/>
    <dbReference type="Gramene" id="ESW13835">
        <property type="protein sequence ID" value="ESW13835"/>
        <property type="gene ID" value="PHAVU_008G230100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2525">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESLDCCM"/>
    <dbReference type="OrthoDB" id="5212574at2759"/>
    <dbReference type="PhylomeDB" id="V7B8D1"/>
    <dbReference type="UniPathway" id="UPA00850"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004326">
        <property type="term" value="F:tetrahydrofolylpolyglutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1190.10:FF:000008">
        <property type="entry name" value="Folylpolyglutamate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.190.20:FF:000011">
        <property type="entry name" value="Folylpolyglutamate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="entry name" value="Mur ligase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="entry name" value="Mur-like, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001645">
        <property type="entry name" value="Folylpolyglutamate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018109">
        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023600">
        <property type="entry name" value="Folylpolyglutamate_synth_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01499">
        <property type="entry name" value="folC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11136:SF16">
        <property type="entry name" value="FOLYLPOLYGLUTAMATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11136">
        <property type="entry name" value="FOLYLPOLYGLUTAMATE SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038895">
        <property type="entry name" value="FPGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="MurD-like peptide ligases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="MurD-like peptide ligases, peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01011">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01012">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 14" id="KW-0436">Ligase</keyword>
    <keyword evidence="10 16" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 14" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur ligase central" evidence="17">
        <location>
            <begin position="121"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="367"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="389"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRNR" id="PIRNR038895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR038895-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR038895-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW13835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="594" mass="66716" checksum="6184D1BB5B2D3D8C" modified="2014-02-19" version="1">MELILRHLPQTTNSSIFFQSFKSQPHLPLFTVLLSPFRQTLSVSSTIQTSIAMPDQEVGKGSPKSSSLSPYEEAMEALSSLITRRTRADASNVGDQFDLLFDYLKMLDLEEPIANMKVIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLIDIRERFRLDGKEICEEKFLAYFWWCYDRLKDKTDDNIPMPTYFRFLALLGFKIFAAEQVDVAIMEVGLGGKYDATNVVQAPIVCGITSLGYDHMEILGNTLGEIAGEKAGIFKNRIPAFTVPQPDEAMHVLEEKASQLNVPLQVVTPLDAKLLNGSRLGLEGEHQYVNAALAIALCFTWLKKTGHVGDIYLEQTDKLPEQFIKGLTSASLQGRAQIVPDQHFKSEISNRLVFFLDGAHSPESMEVCARWFSLAIKEYNPDPTLFHQQLDNSKFSHEVVKTHNEERVSQGKSTPILLFNCLTVRDPQLLLPHLMKTCADHGVYFKKALFVPSLSVFNKVGPQAFTPTDPKVDLSWQFNLQRVWENLMQNSKGKNIDIVSEELKDDMETSASNCEHSAVFPSLPLAIKWLRDRVQQNQSLRFQVLVTGSLHLVGDVLNLVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8F7</accession>
    <name>V7B8F7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G139700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8F7"/>
    <dbReference type="SMR" id="V7B8F7"/>
    <dbReference type="STRING" id="3885.V7B8F7"/>
    <dbReference type="Gramene" id="ESW12756">
        <property type="protein sequence ID" value="ESW12756"/>
        <property type="gene ID" value="PHAVU_008G139700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0390">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GAPIACR"/>
    <dbReference type="OrthoDB" id="2020972at2759"/>
    <dbReference type="PhylomeDB" id="V7B8F7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080188">
        <property type="term" value="P:gene silencing by siRNA-directed DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18793">
        <property type="entry name" value="SF2_C_SNF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="entry name" value="Tandem AAA-ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044567">
        <property type="entry name" value="CLSY/DRD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049730">
        <property type="entry name" value="SNF2/RAD54-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45821">
        <property type="entry name" value="SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45821:SF5">
        <property type="entry name" value="SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="652"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="9">
        <location>
            <begin position="1016"/>
            <end position="1184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="78"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="120"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="223"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="451"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="776"/>
            <end position="796"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="166"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="451"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="780"/>
            <end position="790"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW12756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1218" mass="137619" checksum="77A11B7C38FF6E1A" modified="2014-02-19" version="1">MNRGAPIACRTRNNKRKLFENALLMSRKRKKAREQEAIFSNGVGASVKVEPGSVASLTSSAALAMNCEIVSERGSQRLGEHMGDPIVISDGDDGSEAEEGLRDPESDIFWVKVESKSEEDEGSLVLGDKVGNFGDDDYGREYENPVALSTDEDEDDHGDLLVSSTESEDDETSDEDFLVTNDGDDDGFETEDSTSDDSDGDDGCCCGGDVRGVHRKTVKGMVRKMESDTESSGICKRKGERKGNDQVDEEEQWIGADCTSATSSKSEIYKKEGKHATHKHEAKRVQNVIADFEVCGVHGGNSGCSLPSEVLENMKKSDRGDQSATLQQQIGDSTVVEKSGSKKHINAIDRVNTDVIERKENQHNKGTGLRSVSFSPKNQEKIGDSAKIVMEKDKEGKHKYWFNSNNREKVRVVDDETGDKELHELLRMPSTLKNKCYKFFTECFMGKSNSVKDDSNKLDEKDDDVAEGQTQPLVSRQPIPFHCGFMNEEEPIEKSEQEKELDVLWGEMDMLLRVEEIGTQVNNIGTNEARENEESPASKCKHDTIFNEQIGIYCRWCGWIETEIKYITPPFVDSERYGGRRVASDGGNISKLDRALLNEYDDDLEEIWSHNEGTVWDLIPNIKQSLYPHQQEGFEFIWTNLGGTIDLAKLKTVNPCNEGGCIISHAPGTGKTRLTMVFLQTYLQLFPKCLPVIIAPSNILLTWEDELRKWNLGIPFHNLNSTELSGKEQVINEVDWSGNQRQNKDAIRMVKLCSWYKEKSILLISYNLYEKLAGATSEGDGEKDKNNGKIEKKKHARTREYIESGMGKVLRDYPGLLVLDEGHTPRNQNSYIWKVLSESRTQKRILLSGTPFQNNFLELYNILCLMKPSFPDSIPQELKKFCQSRLMHRRKASKDMSWEPVSSRNPADEKIKQLNLLMNPFVHVHDGSILQKNLPGLRECVLVLKPDTFQQETLESIEYAQNVLNFEHKLALVSVHPSLFLSCSLSKKEESIVDKGKLEKVRLNPYAGVKTKFLIEFIRLCDAVNEKVLVFSQFIDTLNLIKDQLESAFNWTLGMEVLYMYGKLDQKQKQFLINSFNEANSQAKVLLASIKASSEGISLVGASRVVILDVVWNPSVERQAICRAYRLGQKKVVFTYHLLAQGTPECTKYCKQAEKNRLSELVFSNRNAESDKIKRRGVMLEDFEDRVLDLLVQHEKLKEMIGECIIQPKKRDLEILGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8Q4</accession>
    <name>V7B8Q4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G179000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of a SCF (SKP1-cullin-F-box) protein ligase complex. May interact with auxin and auxin-responsive proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8Q4"/>
    <dbReference type="SMR" id="V7B8Q4"/>
    <dbReference type="STRING" id="3885.V7B8Q4"/>
    <dbReference type="Gramene" id="ESW13233">
        <property type="protein sequence ID" value="ESW13233"/>
        <property type="gene ID" value="PHAVU_008G179000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1947">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IIRNCVR"/>
    <dbReference type="OrthoDB" id="550575at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019005">
        <property type="term" value="C:SCF ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031146">
        <property type="term" value="P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22159">
        <property type="entry name" value="F-box_AtTIR1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000029">
        <property type="entry name" value="Transport inhibitor response 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1280.50:FF:000028">
        <property type="entry name" value="Transport inhibitor response 1-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041567">
        <property type="entry name" value="COI1_F-box"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006553">
        <property type="entry name" value="Leu-rich_rpt_Cys-con_subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041101">
        <property type="entry name" value="Transp_inhibit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16134">
        <property type="entry name" value="F-BOX/TPR REPEAT PROTEIN POF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16134:SF36">
        <property type="entry name" value="TRANSPORT INHIBITOR RESPONSE 1-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18511">
        <property type="entry name" value="F-box_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18791">
        <property type="entry name" value="Transp_inhibit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00367">
        <property type="entry name" value="LRR_CC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="COI1 F-box" evidence="8">
        <location>
            <begin position="56"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="Transport inhibitor response 1" evidence="9">
        <location>
            <begin position="116"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="36"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00064183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF18791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW13233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="12">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="628" mass="70014" checksum="F853B0B39A3DEBF9" modified="2014-02-19" version="1">MRENHPSTNSDDDQRSSLLDLARAEISSNSKTRNYGGFPDPGSGSGPSEPQAPFPDQVLENVLENVLHFLSSRHDRNAASLVCRSWYRAEALTRSELFIGNCYALSPARATTRFTRVKSVTVKGKPRFADFDLMPPDWGANFAPWASALAQAYPWLEKLHLKRMNVSDADLALLADSFSTFRELVLVCCEGFGTPGLANVAAKCRLLRVLELVESVVEAEDDEEIDWISCFPESQTNMESLVFDCVECPINFEALESLVARSPRLKKLRLNQFVSMAQLHRLLLRAPQLTHLGTGSFSATEPGVVGELEPDYTATFEACRSLVCLSGFREIWADYLPAIYPVCANLTSLNLSYADVNAHQLKAVIRLCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPVDASEETEGPVSEVGFEAISQGCRKLESILYFCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDPVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLVRTLSVAFAGATDMGLKYVLEGCPNLQKLEIRDSPFGDGALRSGLHNYYNMRFLWMSSCRLTRQACQEIAQALPNLVLEVINENDEENAGDDIEILYMYRSLDGPRDDAPRFVSILH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9M1</accession>
    <name>V7B9M1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pollen-specific protein C13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G171500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Ole e I family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9M1"/>
    <dbReference type="SMR" id="V7B9M1"/>
    <dbReference type="Gramene" id="ESW13141">
        <property type="protein sequence ID" value="ESW13141"/>
        <property type="gene ID" value="PHAVU_008G171500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1QR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHSECAT"/>
    <dbReference type="OrthoDB" id="1896520at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006041">
        <property type="entry name" value="Pollen_Ole_e1_allergen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614:SF5">
        <property type="entry name" value="ALLERGEN-LIKE PROTEIN BRSN20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614">
        <property type="entry name" value="PROTEIN DOWNSTREAM OF FLC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01190">
        <property type="entry name" value="Pollen_Ole_e_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754269" description="Pollen-specific protein C13" evidence="3">
        <location>
            <begin position="18"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW13141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="160" mass="18015" checksum="549B9BB074069CD6" modified="2014-02-19" version="1">MDVRIVFVCVLPVMVSAIRPHLTPFYVKGRVYCDPCRAGFETPLTTYIAGAEVTMECRDRMRGNIVYSKKVKTDSSGSYTIFVDANQANQNCDASLVTSPLRDCREPTPGRDHSRVVLNRFNGIATNDRFVNNLGFMKQKVASACAKILRRYREHDDDGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB48</accession>
    <name>V7BB48_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pre-mRNA-splicing factor SYF2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G019200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in pre-mRNA splicing.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">May be part of a spliceosome complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the SYF2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB48"/>
    <dbReference type="SMR" id="V7BB48"/>
    <dbReference type="STRING" id="3885.V7BB48"/>
    <dbReference type="Gramene" id="ESW14810">
        <property type="protein sequence ID" value="ESW14810"/>
        <property type="gene ID" value="PHAVU_007G019200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2609">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DCINANN"/>
    <dbReference type="OrthoDB" id="199717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071013">
        <property type="term" value="C:catalytic step 2 spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071014">
        <property type="term" value="C:post-mRNA release spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000974">
        <property type="term" value="C:Prp19 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000398">
        <property type="term" value="P:mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013260">
        <property type="entry name" value="mRNA_splic_SYF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13264">
        <property type="entry name" value="GCIP-INTERACTING PROTEIN P29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13264:SF5">
        <property type="entry name" value="PRE-MRNA-SPLICING FACTOR SYF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08231">
        <property type="entry name" value="SYF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 7" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="6 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0747">Spliceosome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="34"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="116"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="35"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU367148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW14810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="314" mass="36831" checksum="71C6EEC17913717A" modified="2014-02-19" version="1">MSGERAVHPDCRNASNPFHECSDYCFRVIAEAKNRSQQRQSEVGQASGGSDSKQDIPDEKHADEEIHDGRPIFEENTESDSDQPDAQEPEQVEVDYTKLSGRQKKWMELRAKMHEAKKRNQIEIAAEKKRMEAPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAFMLDTQEAAEVKYKKWEKDPAPFGWDVFNQKSLYNAYKKRTKNVEVDVEEYNRMKEADLEFYRDASSLQYGKAPKISEQKVDRMVQELKDREEKRKSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBZ0</accession>
    <name>V7BBZ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ABC-type xenobiotic transporter</fullName>
            <ecNumber evidence="3">7.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G276200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + H2O + xenobioticSide 1 = ADP + phosphate + xenobioticSide 2.</text>
            <dbReference type="EC" id="7.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.2" evidence="3"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBZ0"/>
    <dbReference type="Gramene" id="ESW14383">
        <property type="protein sequence ID" value="ESW14383"/>
        <property type="gene ID" value="PHAVU_008G276200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0054">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEFTMYF"/>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008559">
        <property type="term" value="F:ABC-type xenobiotic transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18579">
        <property type="entry name" value="ABC_6TM_ABCC_D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03244">
        <property type="entry name" value="ABCC_MRP_domain2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1560.10:FF:000003">
        <property type="entry name" value="ABC transporter C family member 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000163">
        <property type="entry name" value="Multidrug resistance-associated protein member 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050173">
        <property type="entry name" value="ABC_transporter_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044746">
        <property type="entry name" value="ABCC_6TM_D1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223:SF181">
        <property type="entry name" value="ABC TRANSPORTER C FAMILY MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24223">
        <property type="entry name" value="ATP-BINDING CASSETTE SUB-FAMILY C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="22"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="132"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="311"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="344"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="410"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="489"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="13">
        <location>
            <begin position="410"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="12">
        <location>
            <begin position="583"/>
            <end position="826"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00034018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW14383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="842" mass="94119" checksum="D37F7A1C657DE9D2" modified="2014-02-19" version="1">MLPLFLPLSHIHLSKDVLLQPVFLHGFSCFLHLLLLVAVSLSWVWNKFTTRVRDESKENLDNTLFKTTVFVSLGVSAFSFLLCLFNYFYWYSSGWSEAELVTLLDLVLKTVAWGVVCVCLNKGFFSSAERRFSFLFRAWCVLYLSVSCYCFVVDIVVISERRVALPTQYLVSDVVSTCVGMLFCYVGYFVKKQGHVREKENNGIQEPLLNGGANDGDALSSKGTKGGDTVTPFSYAGILSLFTFSWVGPLIAVGYKKTLDLEDVPQLDSRDSVVGVFPGFRDKLEADCGTMNSVTTLKLVKSLVMLAWKEILFTAFLAVLSTLASYVGPYLIDSFVQYLDGKRVYENQGYVLVCAFFFAKIVECLTQRHWFFRVQLVGLRIRALLVTMIYNKALTLSCQSKQELVYKNLGLASIAAFVATILVILANVPLGSLQEKFQKKLMESKDARMKATSEILRNMKILKLQGWEMKFLAKITELRKTEQGWLKKFVMTTFVFWGTPTFVSVVTFGTCMIIGIPLESGKILSALATFRILQEPIYSLPDSISMIAQTKVSLDRIASFLRLDDLPSDVVEKLPRGTSDSEIEVVDGNFSWELSSPNPTLQNINLRVFHGIQSGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDDQVWEALDKCQLGDEVRKKEGKLDSKVSENGENWSMGQRQLVCLGSVVLKKSKVLVLDEATSSVDTATDNLIPQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSQDNGAGLIEEYDTPTRLLENKSSSFAQLVAEYTVRSMSSLDKSDDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD06</accession>
    <name>V7BD06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">beta-carotene 3-hydroxylase</fullName>
            <ecNumber evidence="5">1.14.15.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G074200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the sterol desaturase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.15.24" evidence="5"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD06"/>
    <dbReference type="STRING" id="3885.V7BD06"/>
    <dbReference type="Gramene" id="ESW15460">
        <property type="protein sequence ID" value="ESW15460"/>
        <property type="gene ID" value="PHAVU_007G074200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSIR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICFVIED"/>
    <dbReference type="OrthoDB" id="9990796at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010291">
        <property type="term" value="F:beta-carotene 3-hydroxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016119">
        <property type="term" value="P:carotene metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016123">
        <property type="term" value="P:xanthophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045019">
        <property type="entry name" value="BETA-OHASE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31899:SF19">
        <property type="entry name" value="BETA-CAROTENE 3-HYDROXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31899">
        <property type="entry name" value="BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0125">Carotenoid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="7">
        <location>
            <begin position="206"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00026097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="361" mass="40498" checksum="CAC0D04E27F8FA27" modified="2014-02-19" version="1">MNLVVVLTPKLWSISNQPRSLNLHFTITNTFLSLSLSPSLHHAEFKTYTLFPSSYQPSMAAGLSTAANLKPYNLLQPPIPLPKPNQTLFFNPFKSLHKSTILRLRPPRKINGFSVCVLTEDRKRNVQIKTNEEEQEASPGVVSAKMEEKSAKRKSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDFPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHQSHHRPREGPFELNDVFAIVNAVPAIALLSYGFLHRGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPTELEEVGGVEELEKEISKRIRSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDI1</accession>
    <name>V7BDI1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G111200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDI1"/>
    <dbReference type="STRING" id="3885.V7BDI1"/>
    <dbReference type="Gramene" id="ESW15889">
        <property type="protein sequence ID" value="ESW15889"/>
        <property type="gene ID" value="PHAVU_007G111200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVCIYLF"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016460">
        <property type="term" value="C:myosin II complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000178">
        <property type="entry name" value="Calmodulin-2 A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050230">
        <property type="entry name" value="CALM/Myosin/TropC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048:SF0">
        <property type="entry name" value="CALMODULIN LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23048">
        <property type="entry name" value="MYOSIN LIGHT CHAIN 1, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00036">
        <property type="entry name" value="EF-hand_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0106">Calcium</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="10"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="46"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="83"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13421" checksum="501DD9AFA87D73D1" modified="2014-02-19" version="1">MTMTDVLSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASEVCIYLFIFLFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDT7</accession>
    <name>V7BDT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G121200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDT7"/>
    <dbReference type="SMR" id="V7BDT7"/>
    <dbReference type="STRING" id="3885.V7BDT7"/>
    <dbReference type="Gramene" id="ESW15999">
        <property type="protein sequence ID" value="ESW15999"/>
        <property type="gene ID" value="PHAVU_007G121200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY3G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RVECRKM"/>
    <dbReference type="OrthoDB" id="1430299at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF72">
        <property type="entry name" value="AP2 DOMAIN CONTAINING PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="7">
        <location>
            <begin position="23"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="17838" checksum="B0803CEED753A171" modified="2014-02-19" version="1">MKMLLHSCETLSEPRYEEKHEVSYRGVRKRGRGNFAAEIRDSTSNGARVWLGTFDTAEDAALAYDQAAITTRGDKAVLNFPPQLVLQSLHNMDFRFQRGLSPILELKKRNFVKRRVECRKMRRKNHRHIGVENIVVLEDLGADYLEELLTLTEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDU2</accession>
    <name>V7BDU2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G121000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDU2"/>
    <dbReference type="SMR" id="V7BDU2"/>
    <dbReference type="STRING" id="3885.V7BDU2"/>
    <dbReference type="Gramene" id="ESW15997">
        <property type="protein sequence ID" value="ESW15997"/>
        <property type="gene ID" value="PHAVU_007G121000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRTM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVNAFEY"/>
    <dbReference type="OrthoDB" id="64928at2759"/>
    <dbReference type="PhylomeDB" id="V7BDU2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36749">
        <property type="entry name" value="F7O18.3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36749:SF1">
        <property type="entry name" value="F7O18.3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="233"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="414" mass="45406" checksum="4FD0EC63EF27F00A" modified="2014-02-19" version="1">MADDLFEGLPAPSSNTAISQHHQLQPRPIAVATNNHDNTESSAVPAPKPILKSALKQSSAVPPPKSILKSSLKRPNPTQPDTQDAAPKKSLKFKTMTDASEAQVIDAMQKISSHIKNPTKFSKAAKLAVQLIQAGSVKSEVSDYFFAILEAAMSSSITCTDPSVRADYHCLFSAAQNTKEHLNKKQNNQLAAWTINAVVANDLYTDDSFVFSKAAGKIKEIISSLPVATEEEDAEEAKSLKDSTVIAEEGGKTPTTDNDNDGKEADPFGLDALIPNSSKKGEKLKARNEAAVEIREDEEETKIFLKSQREALITCLEIAARRYKIPWCQTVIDILVKHASDNVARFTASQRDAVGKLWASIREQQTRRKQGKSVNGKLDVNAFEWLQQKYANEKISIRHSVGNSGDRRAQQWLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE88</accession>
    <name>V7BE88_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G132500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE88"/>
    <dbReference type="Gramene" id="ESW16139">
        <property type="protein sequence ID" value="ESW16139"/>
        <property type="gene ID" value="PHAVU_007G132500g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="85" mass="10403" checksum="D7A39D79F802608E" modified="2014-02-19" version="1">MKHDKCGLSIYFYTVSLKTPAREWKVLDPIFQYSINYYLYKLQHRLAQGRTTNRFREQIVVRWCVFFQKCDASSFRELQWISQVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="21" xmlns="https://uniprot.org/uniprot">
    <accession>V7BF55</accession>
    <name>V7BF55_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G080000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BF55"/>
    <dbReference type="Gramene" id="ESW15533">
        <property type="protein sequence ID" value="ESW15533"/>
        <property type="gene ID" value="PHAVU_007G080000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="79" mass="9043" checksum="92E06F3B8B0C1C6C" modified="2014-02-19" version="1">MGSEGVFTLLPQFTEAMISEGYAFYFILQHQCSPFVSAIFLLFLLDMLAELHNFLLTSETLWLNAFEIIRGNVQGDLFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFL7</accession>
    <name>V7BFL7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G174100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFL7"/>
    <dbReference type="SMR" id="V7BFL7"/>
    <dbReference type="STRING" id="3885.V7BFL7"/>
    <dbReference type="Gramene" id="ESW16649">
        <property type="protein sequence ID" value="ESW16649"/>
        <property type="gene ID" value="PHAVU_007G174100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0236">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCLMGYL"/>
    <dbReference type="OrthoDB" id="288203at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07042">
        <property type="entry name" value="STAS_SulP_like_sulfate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.750.24:FF:000002">
        <property type="entry name" value="Sulfate transporter 31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="entry name" value="STAS domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018045">
        <property type="entry name" value="S04_transporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00815">
        <property type="entry name" value="sulP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="SULFATE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SpoIIaa-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01130">
        <property type="entry name" value="SLC26A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="137"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="246"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="274"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="368"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="406"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="431"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="465"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="8">
        <location>
            <begin position="516"/>
            <end position="639"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="660" mass="73413" checksum="21A2E86CC3EE175B" modified="2014-02-19" version="1">MGSVDHEYPLEMNEAESVPQQKHHVEVPTPQPFLKYLKFSLKETFFPDDPLRQFKNKPPSKKFMLAIQYFFPIFQWAPKYTFHFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDEVNPNEDPTLYLHLAFTATLFAGIFQAALGFFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQIHQWRWESSVLGFVFLFFLLITRYFSKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSVTKLVFVSPYITTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNTDGNKEMIAIGTMNIIGSFTSCYITTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFVLGNIPNSGIYRNVEQYPNAKHVPGILILDIDAPIYFANASYLRERITRWIDEEENRIKATGETSLQYVIMNMSGVGNIDTSGISMLEEVKKITERRELQLVLVNPGSEVMKKLNKSKFQNHLGERWIYLTVEEAVGACNFNLRTRTNLKKDESEGWNNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFW9</accession>
    <name>V7BFW9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G068800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW15386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW15386"/>
        <property type="gene ID" value="PHAVU_007G068800g"/>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754892" evidence="1">
        <location>
            <begin position="27"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="9988" checksum="6943C4BF8842286F" modified="2014-02-19" version="1">MRVSKISTLFLILIILLLSSLQDSYAISRLDNNHVKLESISTEKKISSMFIQSYSAILSSINSRKSKFKQIHAVYRRLVPSGPNPLHN</sequence>
</entry>
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            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="SMR" id="V7BHI1"/>
    <dbReference type="Gramene" id="ESW16333">
        <property type="protein sequence ID" value="ESW16333"/>
        <property type="gene ID" value="PHAVU_007G147900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPP2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WGHPLMM"/>
    <dbReference type="OrthoDB" id="2020012at2759"/>
    <dbReference type="PhylomeDB" id="V7BHI1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025067">
        <property type="entry name" value="DUF4079"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36738">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="Transmembrane di-heme cytochromes"/>
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        <location>
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            <end position="116"/>
        </location>
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        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="224" mass="24082" checksum="48637A843AFE1E5F" modified="2014-02-19" version="1">MAMAVAFSLSSPSSALFQSRHSFAKCLASKQNSPLQLEHVKSRDNTQITLHSFSPFPLLCAAALLPGGEAVGSVFGPFVDLVKSWNLPDWLVHWGHPANMAVVLFAMGGYGTYLGFRIRYSDNVEEKAKAKDLHPKLLAGMFFFFAFGATGGITALLTSDKPIFESPHAVTGVIGLALLTIQTILPSLFEGNPGLRNVHGILGSGIMTLFLVHFALGLQLGFSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHN5</accession>
    <name>V7BHN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Invertebrate defensins family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G237100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7BHN5"/>
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        <property type="gene ID" value="PHAVU_007G237100g"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <location>
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        </location>
    </feature>
    <feature type="chain" id="PRO_5004754946" description="Invertebrate defensins family profile domain-containing protein" evidence="2">
        <location>
            <begin position="31"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="Invertebrate defensins family profile" evidence="3">
        <location>
            <begin position="47"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="69" mass="7204" checksum="7EF19ECBE97C9F49" modified="2014-02-19" version="1">MSAYSQIWIVLFKVLLLATIVVVISSGVGSQHVPPNCHGTCGQFPDCDAHCKVIGYVGGKCSGTLCCCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHZ7</accession>
    <name>V7BHZ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G128000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHZ7"/>
    <dbReference type="SMR" id="V7BHZ7"/>
    <dbReference type="STRING" id="3885.V7BHZ7"/>
    <dbReference type="Gramene" id="ESW16086">
        <property type="protein sequence ID" value="ESW16086"/>
        <property type="gene ID" value="PHAVU_007G128000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2Z5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PVFEIPC"/>
    <dbReference type="OrthoDB" id="10038011at2759"/>
    <dbReference type="PhylomeDB" id="V7BHZ7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF321">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="15"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="81"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="92"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="15912" checksum="077BD60AD34196ED" modified="2014-02-19" version="1">MEENQKGKQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRVWLGTFDTAEEAARAYDRAAFNLRGHLATLNFPSEYYSQIRGSPPYPPHLAPPSSSSSHAAGCTSSSGAYHRPVFEIPCLDDKVLEDLLGQSEENKKKKKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIJ6</accession>
    <name>V7BIJ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Gamma-tubulin complex component</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G147200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Component of the gamma-tubulin ring complex (gTuRC) which mediates microtubule nucleation.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Cytoplasm</location>
            <location evidence="1 7">Cytoskeleton</location>
            <location evidence="1 7">Microtubule organizing center</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the TUBGCP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIJ6"/>
    <dbReference type="SMR" id="V7BIJ6"/>
    <dbReference type="STRING" id="3885.V7BIJ6"/>
    <dbReference type="Gramene" id="ESW16326">
        <property type="protein sequence ID" value="ESW16326"/>
        <property type="gene ID" value="PHAVU_007G147200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2065">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QLSMWLL"/>
    <dbReference type="OrthoDB" id="78652at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000930">
        <property type="term" value="C:gamma-tubulin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000922">
        <property type="term" value="C:spindle pole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045298">
        <property type="term" value="C:tubulin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043015">
        <property type="term" value="F:gamma-tubulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051011">
        <property type="term" value="F:microtubule minus-end binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043622">
        <property type="term" value="P:cortical microtubule organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051321">
        <property type="term" value="P:meiotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007020">
        <property type="term" value="P:microtubule nucleation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000278">
        <property type="term" value="P:mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009624">
        <property type="term" value="P:response to nematode"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051225">
        <property type="term" value="P:spindle assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1900:FF:000010">
        <property type="entry name" value="Gamma-tubulin complex component"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1900">
        <property type="entry name" value="Gamma-tubulin complex, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007259">
        <property type="entry name" value="GCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040457">
        <property type="entry name" value="GCP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042241">
        <property type="entry name" value="GCP_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041470">
        <property type="entry name" value="GCP_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19302">
        <property type="entry name" value="GAMMA TUBULIN COMPLEX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19302:SF27">
        <property type="entry name" value="GAMMA-TUBULIN COMPLEX COMPONENT 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04130">
        <property type="entry name" value="GCP_C_terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17681">
        <property type="entry name" value="GCP_N_terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="4 7" id="KW-0493">Microtubule</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gamma tubulin complex component protein N-terminal" evidence="9">
        <location>
            <begin position="2"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="Gamma tubulin complex component C-terminal" evidence="8">
        <location>
            <begin position="382"/>
            <end position="705"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00053139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF17681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW16326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="728" mass="83928" checksum="93B7D2404DB38E69" modified="2014-02-19" version="1">MLHELLLALLGYTGDLIVDRRDHLTAEAPISDECTFKLAPDISFIDPSDRELIERIIVLGFYYREMERFSAKCRNLSWIRSANTNPLEKKEKGSVYRRALANGIVEVLSVYRSAVLHIEQKLLSETMPILATVTQGLNKFFCLLPPLYELILEIERDDIHGGQLLNLLHKRCHCGVPELQTCMQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFIRRQEDRDVGNNSSHPDISEKLARMSTDDASLSDWHLGFHVYLKMLPEYIPERVAESILFAGKAVRVLRNPSPSFQSGDAMHPQMPKSFQKIHGLAGRFHFHREPAINMGIGDDLLPQSEADKIEAMLLNLKESSEFHKRSFECAVDSVQTIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLTVPFQLAALKTIGEEDKYFSKVSLRMPSFGITVKPSLIDLPKPASSLDGSALSEVSVDGWDGIALGYSVDWPLHLFFTQEVLSKYVRIFQYLLRLKRTQMELEKLWASVMHQYHSDFAKRRNDQEKCSETQQKQQRFRPMWRVREHMAFLIRNLQFYIQVDVIESQWNILQSHIQESRDFTELVGFHQEYLSALISQAFLDIGSVSRILDSIMKLCLQFCWNIENQDNCSNTSELEHIAEEFNKKSNSLYTILRSSRLAGSQRAPFLRRFLLRLNLNSFFEATARGVLNVVRPHPTLPALNQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIQ3</accession>
    <name>V7BIQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Myb/SANT-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G266500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIQ3"/>
    <dbReference type="STRING" id="3885.V7BIQ3"/>
    <dbReference type="Gramene" id="ESW17767">
        <property type="protein sequence ID" value="ESW17767"/>
        <property type="gene ID" value="PHAVU_007G266500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSVV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELCVICG"/>
    <dbReference type="OrthoDB" id="1848055at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024752">
        <property type="entry name" value="Myb/SANT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46929">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46929:SF33">
        <property type="entry name" value="L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12776">
        <property type="entry name" value="Myb_DNA-bind_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb/SANT-like" evidence="2">
        <location>
            <begin position="39"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Myb/SANT-like" evidence="2">
        <location>
            <begin position="158"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="288"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="449" mass="51674" checksum="2341C219649A1290" modified="2014-02-19" version="1">MGDDSSLSLDKLRANWTPSQDQYFHELLLCHVHKGNKTEVLKNRFKRFRKQYNEIKMIVSQKGFQWDEAQNMIIADDKAWDACIKLHPDAQPFKTRLIPNYNDLRIIFGHTVADGRYSLSCFDVDFEYEEKELDEKTITSKGVDNQTPTAFSQGKIDWSPIMDQFFVELMVDQLRKGNKIDRTFRRQTWVHMTESFNKRFGCRCGKVVLRNRFSVLRRHYCSINVLLRKEGFSWDKTQHKVVADDQAWQKCIRVNHSFRLYKIRSMPFYSGMCIVCRNEEVTAGFKSNLPKGSSGGNNSVPDAQPLCNEDKGASHLGDADKEALHIGGEKKSFRETQTLTNADNEALQHVGKNVSGHLKRHQPKMPATLNESKKARGHMAVAVTSLTKAKDDNFSVDNVISVLQAIPDLDDDLILDACDFLEDERRARLFLALAAPLRKKWLLRKLRSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJU5</accession>
    <name>V7BJU5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G229600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJU5"/>
    <dbReference type="SMR" id="V7BJU5"/>
    <dbReference type="STRING" id="3885.V7BJU5"/>
    <dbReference type="Gramene" id="ESW17320">
        <property type="protein sequence ID" value="ESW17320"/>
        <property type="gene ID" value="PHAVU_007G229600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPJH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAEINQA"/>
    <dbReference type="OrthoDB" id="644067at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14707">
        <property type="entry name" value="bZIP_plant_BZIP46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000020">
        <property type="entry name" value="BZIP transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043452">
        <property type="entry name" value="BZIP46-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952">
        <property type="entry name" value="CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22952:SF175">
        <property type="entry name" value="PROTEIN ABSCISIC ACID-INSENSITIVE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00036">
        <property type="entry name" value="BZIP_BASIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="8">
        <location>
            <begin position="338"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="132"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="363"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW17320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="421" mass="45992" checksum="A7FFB5D9865C95E1" modified="2014-02-19" version="1">MVVAESDMNSQNEVESPIELEQQHNMNKNHPFPSLGREASIYSLTLDEFQHTLWESGKNFGSMNMDEFLTSIWCAEESQILNNNNMNSLSLSEASAEKGLIRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHKVQQQRQQQNNNNNRGSVNNNNNAENTESARRQPTFGEMTLEDFLIKAGIVREQRSIAISVPASTSQNHHMQHYGFFPNNNRTMEPSFVGRQVMGVGGGAGGGCAGGNVVAPPYQAVAQGGGGGGAVGESSVYSAAVPAAVCFGPRVVNGGGGYAAVSKMGVVAPVSPVSPEGIGTGENFGCGFGMDRGVLRGRKRVLDGPVEKVVERRQRRMIKNRESAARSRARKLAYTVELEAELNQLKEENGELKLALADIERRRKQQNLEEGNCRVEKAKKKLRSLRRTLSCPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLM0</accession>
    <name>V7BLM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">FYVE-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G078700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLM0"/>
    <dbReference type="STRING" id="3885.V7BLM0"/>
    <dbReference type="Gramene" id="ESW18879">
        <property type="protein sequence ID" value="ESW18879"/>
        <property type="gene ID" value="PHAVU_006G078700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWJE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YLFRHRC"/>
    <dbReference type="OrthoDB" id="1746176at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053057">
        <property type="entry name" value="XLG_GTP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36486">
        <property type="entry name" value="OS01G0977800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36486:SF3">
        <property type="entry name" value="ZINC FINGER, RING_FYVE_PHD-TYPE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="251"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="42"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="251"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="301" mass="33169" checksum="985FC92C57E5B7BB" modified="2014-02-19" version="1">MGDEHMKTLQAKPKLGLEELYQGIPDESVNLTFQDLPNVISSHHTNTTMPTTTSEHVSGTAATNNNPSKVPSPSLSTVPSLDFGKGLEGLNHSPHHHNHNNRRRQHQDFGHGVGDSWGHFNHASGGAARAQISRASEYSMSYDGMSGESFASGKGGSVRRRRPGIPHSTICTICSNYVYLFRTRCLVCGRVYCRQCVEIGMGEMTEGRKCIECLGLRFSQRYIERAGMVGCCSWRYPSTLKHAELTWAEKGPRRSGDRGYGHHSMASSRPRRTPLSIASTEPSLVMSATHSPFSAHYNLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLQ3</accession>
    <name>V7BLQ3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="26">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_006G078900g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="23">Involved in the biosynthesis of the cyanogenic glucosides linamarin and lotaustralin and of the nitirle glucosides rhodiocyanoside A and D. Can use L-isoleucine &gt; L-valine as substrate, but not L-leucine, L-phenylalanine or L-tyrosine. Catalyzes multi-step reactions starting with two successive N-hydroxylations using L-isoleucine and, to a lower extent, L-valine as substrates leading to the formation of N,N-dihydroxy-L-valine and N,N-dihydroxy-L-isoleucine, respectively; following spontaneous reactions lead to the production of (E)-2-methylpropanal oxime and (1E,2S)-2-methylbutanal oxime, respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-isoleucine + 2 reduced [NADPH--hemoprotein reductase] + 2 O2 = (1E,2S)-2-methylbutanal oxime + 2 oxidized [NADPH--hemoprotein reductase] + CO2 + 3 H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:28602"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:134628"/>
            <dbReference type="EC" id="1.14.14.39"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="22">
            <text>L-isoleucine + reduced [NADPH--hemoprotein reductase] + O2 = N-hydroxy-L-isoleucine + oxidized [NADPH--hemoprotein reductase] + H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:30479"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61131"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-valine + 2 reduced [NADPH--hemoprotein reductase] + 2 O2 = (E)-2-methylpropanal oxime + 2 oxidized [NADPH--hemoprotein reductase] + CO2 + 3 H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:28606"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61143"/>
            <dbReference type="EC" id="1.14.14.38"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-valine + reduced [NADPH--hemoprotein reductase] + O2 = N-hydroxy-L-valine + oxidized [NADPH--hemoprotein reductase] + H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:30491"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61140"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>N-hydroxy-L-isoleucine + reduced [NADPH--hemoprotein reductase] + O2 = N,N-dihydroxy-L-isoleucine + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30483"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61131"/>
            <dbReference type="ChEBI" id="CHEBI:61133"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>N-hydroxy-L-valine + reduced [NADPH--hemoprotein reductase] + O2 = N,N-dihydroxy-L-valine + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30495"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61140"/>
            <dbReference type="ChEBI" id="CHEBI:61142"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 24">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Secondary metabolite biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Microsome membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 25">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLQ3"/>
    <dbReference type="SMR" id="V7BLQ3"/>
    <dbReference type="Gramene" id="ESW18882">
        <property type="protein sequence ID" value="ESW18882"/>
        <property type="gene ID" value="PHAVU_006G078900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INERWRQ"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102001">
        <property type="term" value="F:isoleucine N-monooxygenase (oxime forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102002">
        <property type="term" value="F:valine N-monooxygenase (oxime forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019756">
        <property type="term" value="P:cyanogenic glycoside biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd20658">
        <property type="entry name" value="CYP79"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000037">
        <property type="entry name" value="Cytochrome P450 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944">
        <property type="entry name" value="CYTOCHROME P450 98A9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944:SF4">
        <property type="entry name" value="OS09G0441700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="16" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 24 25" id="KW-0349">Heme</keyword>
    <keyword evidence="13 24 25" id="KW-0408">Iron</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 24 25" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0492">Microsome</keyword>
    <keyword evidence="14 25" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="12 25" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="binding site" description="axial binding residue" evidence="24">
        <location>
            <position position="475"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00051005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00051234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00051269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00051419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00052460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00052887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00058503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW18882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="537" mass="60970" checksum="F3A4DFE8519671CA" modified="2014-02-19" version="1">MGYTPFLLLSNLQSSWPSLLAIITCFMIMIKTLRSNFTESYSKKQKPNLPPGPKPWPIVGNLPEMLANKPAYKWIHNLMKDMNTEIACIRLGNAYVIPVTSPTIATEFLRKQDATFASRSLSMSTELVTSGYSTTIFVPFGDQWKKMKKIVTKDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVNDGISGLVNVRTAARHYCGNLIRKITFNARYFGKAREDGGPGLEEVEHVDSIFDLLNYIYSFSVSDYMPCLRALDLDGHEKKVKEALSIIKKYHDPIVQQRIKQWNDGLKVDEEDWLDILISLKDSNNNPSLTLEEINAQIIELMLATVDNPSNAFEWALAEMINQPELLHRAVEELDSVVGKDRMVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTMVGNYFIPKGSHVLLSRQELGRNPKVWNEPYKFKPERHLKSDGDDVVLTEPNLKLISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPNVSTINLSESDHDILLAQPLLAVAHPRLPTQLFQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMG9</accession>
    <name>V7BMG9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G025600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMG9"/>
    <dbReference type="SMR" id="V7BMG9"/>
    <dbReference type="Gramene" id="ESW18255">
        <property type="protein sequence ID" value="ESW18255"/>
        <property type="gene ID" value="PHAVU_006G025600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1917968at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14368">
        <property type="entry name" value="LTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00382">
        <property type="entry name" value="LIPIDTRNSFER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756903" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="3">
        <location>
            <begin position="19"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="4">
        <location>
            <begin position="15"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="11741" checksum="5C601713D7C0ABCF" modified="2014-02-19" version="1">MVMFVMGYGLAITRLSEGQMPASCDEYNPLFSPCVSYLANPDFGIPSPRCCAGAAQVFGKATNPATIKKLCTCLVATMPKLSFKPEKLTQLPTACKIKLSFPIDKCIKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ00</accession>
    <name>V7BQ00_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Translation initiation factor eIF2B subunit epsilon</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">eIF2B GDP-GTP exchange factor subunit epsilon</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G097200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Component of the translation initiation factor 2B (eIF2B) complex which is a heterodecamer of two sets of five different subunits: alpha, beta, gamma, delta and epsilon. Subunits alpha, beta and delta comprise a regulatory subcomplex and subunits epsilon and gamma comprise a catalytic subcomplex. Within the complex, the hexameric regulatory complex resides at the center, with the two heterodimeric catalytic subcomplexes bound on opposite sides.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the eIF-2B gamma/epsilon subunits family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ00"/>
    <dbReference type="SMR" id="V7BQ00"/>
    <dbReference type="STRING" id="3885.V7BQ00"/>
    <dbReference type="Gramene" id="ESW19108">
        <property type="protein sequence ID" value="ESW19108"/>
        <property type="gene ID" value="PHAVU_006G097200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1461">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LAQSCKI"/>
    <dbReference type="OrthoDB" id="424572at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005851">
        <property type="term" value="C:eukaryotic translation initiation factor 2B complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005085">
        <property type="term" value="F:guanyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031369">
        <property type="term" value="F:translation initiation factor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04197">
        <property type="entry name" value="eIF-2B_epsilon_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05787">
        <property type="entry name" value="LbH_eIF2B_epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11558">
        <property type="entry name" value="W2_eIF2B_epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.180:FF:000022">
        <property type="entry name" value="Translation initiation factor eIF-2B epsilon subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000106">
        <property type="entry name" value="Translation initiation factor eIF-2B subunit epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.10.10:FF:000029">
        <property type="entry name" value="Trimeric LpxA-like enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.10.10">
        <property type="entry name" value="Hexapeptide repeat proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035543">
        <property type="entry name" value="eIF-2B_epsilon_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051956">
        <property type="entry name" value="eIF2B_epsilon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056764">
        <property type="entry name" value="LbH_EIF2B3/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003307">
        <property type="entry name" value="W2_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044123">
        <property type="entry name" value="W2_eIF2B_epsilon"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45887">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45887:SF1">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25084">
        <property type="entry name" value="LbH_EIF2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02020">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00515">
        <property type="entry name" value="eIF5C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="Trimeric LpxA-like enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51363">
        <property type="entry name" value="W2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="W2" evidence="10">
        <location>
            <begin position="553"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="526"/>
            <end position="554"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00044144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00044345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00046432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW19108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="726" mass="81934" checksum="8A0CA0B697026847" modified="2014-02-19" version="1">MGAQKKSGARVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLEKSEWLSQPNFTVATIESQNSVSAGDALRVIYERNVIHGDFILISGDTVSNMSLTQALLEHKERRKKDNNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLVYYEDRADQSRGTLHLDKSLLVDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGHTATKLERQGMYRALEISQSQSAVIGPFTVIGSGTKIGNNTKISNSVIGEGCKIGSNVIIEGCYIWDNISIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKVVVGPEFVVPPYSKVSLFQQPIEEDSDEELEYADSTSVIGSQVDKSDIEISSKVLETNFSPASQLGIGGAGHVWSTCEGGHEEEWRHSVAPIPKDKILEAIKTMEDDMEFAQDDSFLPPSGELKPNSNDSDDDDHEDSRDDSYYFEKEVEATFLRAVHENIQESHLMLEINSLKLSYNKQTSDCAGALFYAMMKYALDIPHSSADSLLQNVQVVFTKWKKALTSYLNDKDEQIEVILKFEEMCLESANEFAPLFTTILHHLYNDDVIEENAILSWEDEKKDADEADKVFVKQAQKFIQWLKEAPEEDDEEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ59</accession>
    <name>V7BQ59_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G183000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ59"/>
    <dbReference type="SMR" id="V7BQ59"/>
    <dbReference type="Gramene" id="ESW20127">
        <property type="protein sequence ID" value="ESW20127"/>
        <property type="gene ID" value="PHAVU_006G183000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ82">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DMMKPGS"/>
    <dbReference type="OrthoDB" id="2274046at2759"/>
    <dbReference type="PhylomeDB" id="V7BQ59"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="CDD" id="cd04491">
        <property type="entry name" value="SoSSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048970">
        <property type="entry name" value="OB_Ssb-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31472:SF8">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31472">
        <property type="entry name" value="OS05G0244600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21473">
        <property type="entry name" value="OB_Ssb-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Single-stranded DNA binding protein Ssb-like OB fold" evidence="2">
        <location>
            <begin position="27"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="11"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF21473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="146" mass="16031" checksum="9214F82208BF316B" modified="2014-02-19" version="1">MASSNSTQQDVNKPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSDTVVHKPRPSSAHNIKPTVIAECLIGDDTGTIIFTARNEQVDLMKAGSTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPADFVVKEDNNLSLVEYELVNVVEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQE4</accession>
    <name>V7BQE4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G110400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQE4"/>
    <dbReference type="STRING" id="3885.V7BQE4"/>
    <dbReference type="Gramene" id="ESW19270">
        <property type="protein sequence ID" value="ESW19270"/>
        <property type="gene ID" value="PHAVU_006G110400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S708">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFAISMP"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009424">
        <property type="entry name" value="AGP16/20/22/41"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33374">
        <property type="entry name" value="ARABINOGALACTAN PROTEIN 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06376">
        <property type="entry name" value="AGP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="68" mass="7220" checksum="FE137594D1C109F9" modified="2014-02-19" version="1">MTFFKAASEVLAIYTFIFAIFSPAVLEAQSLSLAPAPAPSSDGTSIDQGIAYTLMLVALVLTYLIHPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQV7</accession>
    <name>V7BQV7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_006G203900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQV7"/>
    <dbReference type="Gramene" id="ESW20377">
        <property type="protein sequence ID" value="ESW20377"/>
        <property type="gene ID" value="PHAVU_006G203900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AFFVVCC"/>
    <dbReference type="OrthoDB" id="9984778at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000233">
        <property type="entry name" value="RING-H2 finger protein ATL54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044600">
        <property type="entry name" value="ATL1/ATL16-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913:SF19">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="80"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="17">
        <location>
            <begin position="173"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="15">
        <location>
            <begin position="53"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW20377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="42596" checksum="8B26D9D8284DCD4C" modified="2014-02-19" version="1">MGLRHLTNLMTPLPQLCASLCHVKKSEACSPDCEICLRICLTNPQYPNYDSPPAAPPPPPQLPPFNLDNGGVDESSSHRIATYLFLALAILTIAFFVVCCRTIYTRFSSRRRVPSRHQPESRGGGDFVDEEHGAMVDHPIWYIRTLGLQQSIISAITVCRYKKGEGLIEGTECAVCLSEFEEDENLRLLPKCYHAFHLPCIDTWLRSHTNCPICRAPIVSDLATARLDSTFLDSESFGDSHVEILENSASDSELGNRAEEEGRVEGEDGVRVCETETPVEEVPYILPRRSVSLDSFSVANINRALATVGSNGSSKRVLDDAGSSSKGGFGNDLATTFKGSSSFRLTRYLQGAPSSSMKRSQSYNGKYLLSWYGRNQKKPNGSLRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUC6</accession>
    <name>V7BUC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Trafficking protein particle complex subunit 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G085200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Golgi apparatus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUC6"/>
    <dbReference type="STRING" id="3885.V7BUC6"/>
    <dbReference type="Gramene" id="ESW21617">
        <property type="protein sequence ID" value="ESW21617"/>
        <property type="gene ID" value="PHAVU_005G085200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1931">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FFKHENY"/>
    <dbReference type="OrthoDB" id="10256906at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990071">
        <property type="term" value="C:TRAPPII protein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000919">
        <property type="term" value="P:cell plate assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034498">
        <property type="term" value="P:early endosome to Golgi transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006891">
        <property type="term" value="P:intra-Golgi vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045126">
        <property type="entry name" value="TRAPPC10/Trs130"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022233">
        <property type="entry name" value="TRAPPC10/Trs130_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056913">
        <property type="entry name" value="TRAPPC10/Trs130_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13251">
        <property type="entry name" value="EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13251:SF3">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12584">
        <property type="entry name" value="TRAPPC10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23036">
        <property type="entry name" value="TRAPPC10_1st"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="TRAPPC10/Trs130 N-terminal" evidence="5">
        <location>
            <begin position="2"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="TRAPPC10/Trs130 C-terminal" evidence="4">
        <location>
            <begin position="1037"/>
            <end position="1115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF23036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1156" mass="129522" checksum="0B127DD003C90B55" modified="2014-02-19" version="1" fragment="single">DLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYARLEVEFNTKKRERCCKYDIHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALVNTRNKPLTQMVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAATRGYSFIISFSKSLSLHERILPFCMREVWVATACLSLIEATTSNYTDGHVAPDIEKEYFRLLGDLYSLSRLKFMRLAYLIGFGTDIERSPVNSASLSLLPWPKPAVWPSLPADASAEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRLRASLSAGNASEMFDNRQGPLDGSGFDASTRISPHKAPANSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTISNPELLKSLSSSEEFEHKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGNFDQAAESYEKVCALYAGEGWQDLLAEVLPNLAECQKMLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVIRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEHQWVGILVRPVKYSLKAAVLHIDTGPGLEIKESHVIEMESYAGVSQNKDDQLQNDSAQINSDKNFERLTLNDGKIEFPNWASDNPSILWVLVRAISDTLSTGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLSVYDAWLDLQDGFVHTGQTEGRANSSFFPLIISPTSKAGILFSICLDKTNAEEARKKPESILYIKYGISGNRTIGAHPPVMNESTGVDDARQELIFRSAITLQRPVLDPCLAVGFLPLPSNGLRVGQLIKMQWRVERLKDLDEEGVSKPDDEVLYEVNANSGNWMIAGRKRGYASLSSKQGARIIISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWF3</accession>
    <name>V7BWF3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G145600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWF3"/>
    <dbReference type="STRING" id="3885.V7BWF3"/>
    <dbReference type="Gramene" id="ESW22337">
        <property type="protein sequence ID" value="ESW22337"/>
        <property type="gene ID" value="PHAVU_005G145600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S9X0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSRPEAC"/>
    <dbReference type="OrthoDB" id="650965at2759"/>
    <dbReference type="PhylomeDB" id="V7BWF3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004860">
        <property type="term" value="F:protein kinase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032875">
        <property type="term" value="P:regulation of DNA endoreduplication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040389">
        <property type="entry name" value="SMR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33142">
        <property type="entry name" value="CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33142:SF15">
        <property type="entry name" value="CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0649">Protein kinase inhibitor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="70" mass="7771" checksum="6E77267CED999047" modified="2014-02-19" version="1">MNGGEKDTNGRCSTPDRWDCRIPAALAPPPPPKKKPFSFGMKREAPKNGYFHPPDLDQLFSLVLPTTAFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWJ3</accession>
    <name>V7BWJ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PRELI/MSF1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G148700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWJ3"/>
    <dbReference type="SMR" id="V7BWJ3"/>
    <dbReference type="STRING" id="3885.V7BWJ3"/>
    <dbReference type="Gramene" id="ESW22377">
        <property type="protein sequence ID" value="ESW22377"/>
        <property type="gene ID" value="PHAVU_005G148700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22378">
        <property type="protein sequence ID" value="ESW22378"/>
        <property type="gene ID" value="PHAVU_005G148700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3336">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YCPWNEK"/>
    <dbReference type="OrthoDB" id="407630at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005758">
        <property type="term" value="C:mitochondrial intermembrane space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006797">
        <property type="entry name" value="PRELI/MSF1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037365">
        <property type="entry name" value="Slowmo/Ups"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11158">
        <property type="entry name" value="MSF1/PX19 RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04707">
        <property type="entry name" value="PRELI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50904">
        <property type="entry name" value="PRELI_MSF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRELI/MSF1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="185" mass="21322" checksum="7733798D31D9E0A7" modified="2014-02-19" version="1">MVKAYRQEHVYKHPWERVTSASWRKFADPENKRILSHIVDVDTLNHSLDPSSGKLCTTRAITIHCPGPWFVRRIVGQDICHCVESTVVDAQSRSMQLTSRNISLQKFIEVEEKIRYDPHPDNPSGWTVCQQETRIRIKPLSALASMAEKVEQRCAERFLQNSVKGREVMERICKYLEAESSSLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWX8</accession>
    <name>V7BWX8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G079900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWX8"/>
    <dbReference type="Gramene" id="ESW21548">
        <property type="protein sequence ID" value="ESW21548"/>
        <property type="gene ID" value="PHAVU_005G079900g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="74" mass="8146" checksum="80B28772A023544E" modified="2014-02-19" version="1">MPLPAPSSSNSTMEFSITITQRRPTPLLLATTKHNGGRPRHPQTNQTTTTKHTDTPLLTKTAHNPQKGKDPVTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3A2</accession>
    <name>V7C3A2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G041900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3A2"/>
    <dbReference type="STRING" id="3885.V7C3A2"/>
    <dbReference type="Gramene" id="ESW23376">
        <property type="protein sequence ID" value="ESW23376"/>
        <property type="gene ID" value="PHAVU_004G041900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5G8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TKCRSRG"/>
    <dbReference type="OrthoDB" id="566409at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37760">
        <property type="entry name" value="CHAPERONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37760:SF1">
        <property type="entry name" value="CHAPERONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="110" mass="11566" checksum="4D4FD068C3223502" modified="2014-02-19" version="1">MDNITASEVAGLGVGALLLSATLAATKVDAFFSSSQRSSLEMCKRCGNLRRLACSNCKGTGSIREGGILGIKPVEGFFETFGDSESKVKQIACVKCQAKGYFSCPNCSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4M6</accession>
    <name>V7C4M6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">xyloglucan:xyloglucosyl transferase</fullName>
            <ecNumber evidence="3">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G111800g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>breaks a beta-(1-&gt;4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.</text>
            <dbReference type="EC" id="2.4.1.207"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Extracellular space</location>
            <location evidence="2">Apoplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="3"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4M6"/>
    <dbReference type="SMR" id="V7C4M6"/>
    <dbReference type="STRING" id="3885.V7C4M6"/>
    <dbReference type="Gramene" id="ESW24215">
        <property type="protein sequence ID" value="ESW24215"/>
        <property type="gene ID" value="PHAVU_004G111800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRCC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FTANACT"/>
    <dbReference type="OrthoDB" id="4781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044042">
        <property type="term" value="P:glucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0052">Apoplast</keyword>
    <keyword evidence="4" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0964">Secreted</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GH16" evidence="11">
        <location>
            <begin position="7"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="Xyloglucan endo-transglycosylase C-terminal" evidence="12">
        <location>
            <begin position="87"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00034022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF06955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW24215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="140" mass="16899" checksum="A58E481F37BD4E1D" modified="2014-02-19" version="1">MQLIVGRFYVDRVPVRVFKNNGEANNFFPDEKPMYLFSNIWNVDDWVIRGGLEKTNWKLSPFVSSYKDFIVDGCQWEDPYPACVSTTTKNWWDQYDAWHLSGDQKMDYAWVQRNLVIYDYWKDFERFPTTPKERSLSPWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4U4</accession>
    <name>V7C4U4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Inositol polyphosphate-related phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G0893000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the inositol polyphosphate 5-phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4U4"/>
    <dbReference type="Gramene" id="ESW23941">
        <property type="protein sequence ID" value="ESW23941"/>
        <property type="gene ID" value="PHAVU_004G0893000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0565">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="62798at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004445">
        <property type="term" value="F:inositol-polyphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034485">
        <property type="term" value="F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004439">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046856">
        <property type="term" value="P:phosphatidylinositol dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.10.10:FF:000014">
        <property type="entry name" value="Type I inositol polyphosphate 5-phosphatase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.10.10:FF:000038">
        <property type="entry name" value="type IV inositol polyphosphate 5-phosphatase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045849">
        <property type="entry name" value="IP5P_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45666:SF33">
        <property type="entry name" value="TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45666">
        <property type="entry name" value="TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00128">
        <property type="entry name" value="IPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="4">
        <location>
            <begin position="288"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="47"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="67"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW23941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="647" mass="74049" checksum="665212923202BE1C" modified="2014-02-19" version="1">MKHHHRSPHHQQRTWAEICCFGWSCIQLFWAKVVMRKWLNMGSYESDYSADPDDDEDDSESGSDNEEWGRQSRFADNRGDEDETPAESTEFLPKLRRQKSSTFRSQYINKKELKICVGTWNVGGKLPPDDLDIDDWLGVNEPADIYVLGLQEIVPLNPGNVFGAEDTRPVTKWENIIRETLNRVRPEIPKIKSFSDPPSPSKFKPSDDVPDIEEEILLESDSDIGEEVHPLDEDNNFYDEGADGTIMGESESTNLLASAATDIVNSSLPVKTDLQRQFSFPKMFDRHQGLSENMDTSFSQQATKLSRMLSGSERIGLSWPEPPLHLLSQRVLDRPTSFKSLKSFKSSKSFKTYNSFKSIMDEIPGTVLFPEIDLEALIKRKRRSSYVRIVSKQMVGIFITVWVRRSLRKHIQNLKVSTVGVGLMGYIGNKGSISISMSIHQTLFCFICTHLTSGEKEGDELKRNADVHEILRRTQFHSLSYIGLPKRILAHERIIWLGDLNYRINLSNVETKALISKKQWSKLVEKDQLMRELKNGVFGGWSEGILNFPPTYKYEVNSDKYYGEDPKVGKRSPAWCDRILSYGKGMKLLTYRRAELKLSDHRPVTATYMVEVEAFSPRKLQRALTFTDAEIQNEQVITNLSNWNLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4X2</accession>
    <name>V7C4X2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transcriptional regulator SLK2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G121400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4X2"/>
    <dbReference type="STRING" id="3885.V7C4X2"/>
    <dbReference type="Gramene" id="ESW24330">
        <property type="protein sequence ID" value="ESW24330"/>
        <property type="gene ID" value="PHAVU_004G121400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QURB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="774557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029005">
        <property type="entry name" value="LIM-bd/SEUSS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10378">
        <property type="entry name" value="LIM DOMAIN-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01803">
        <property type="entry name" value="LIM_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="135"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="685"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="785"/>
            <end position="865"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="135"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="685"/>
            <end position="697"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="698"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="734"/>
            <end position="743"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="785"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="797"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="817"/>
            <end position="841"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="842"/>
            <end position="855"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="856"/>
            <end position="865"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="900" mass="98500" checksum="058F3B72BF056531" modified="2014-02-19" version="1">MPPMTPSRVTGGLTQSSSHSGIFFQGDGQSQSVVNTHLSSSIVNSSSTVTGARRTNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVIDGSSVVQQSTHQDQNPQQLQQNQQQLQGASSATSLPASQTGPSSLHMGAHVPGSFIHDPNNASQLSKKPRLDIKQEDLMQQHQVIQQILQRQDSMQLQGRNPQLQALLQQQQRLRQQQIFQSMPQLQRVHLQQQQQQQQQQQHQQQMQLRQQLQQQVMQPSSAVKRPCDNGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYNNVGHHALGVFPQAATDAWQCDICGCKSGRGFEATYEVLPRLDEIKFGGGVIDELLFLDLPREIRFSSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPPVNQLVQVAQKCQSTIAESGADGVSQQDLQANSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAEHRVGAIGNLRVVFIMRLPSIVLIFGFWNYIFTLPLTLPAECLKNYPLLTTASKLQMQKMQEMEQMANVHGLPTDRNTLNKLMAMNPGLNNQINNSQNVVSRGALSGSSHLALTNYQSLLVRQNSMNSSPGSLQREGSSFNNSSPSPSSALQGAGPSLIPGSMQNSSVGGFPGSHLTSQQSPQLLQQRTLSANGLLQQNHSQGSQGNQALQQQQQMIHQLVKEMSNNNGGMQSQPLGGPNANGNMAKNAMGFGGHTPSLSGGSANLPRNNGPMSRNNSFKTASNSDSSAAAGNSGFNPRTSDMPQSLHLQDVVQDIGHDFADNPFFNSDLDDDMGFGWKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7C577</accession>
    <name>V7C577_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G1308001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW24435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="10" mass="1095" checksum="C8DFAEB330572866" modified="2014-02-19" version="1" fragment="single">PSQGLIKCSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7S2</accession>
    <name>V7C7S2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G035800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7S2"/>
    <dbReference type="Gramene" id="ESW25438">
        <property type="protein sequence ID" value="ESW25438"/>
        <property type="gene ID" value="PHAVU_003G035800g"/>
    </dbReference>
    <dbReference type="OMA" id="CIWELHR"/>
    <dbReference type="OrthoDB" id="1386737at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="3" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW25438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="173" mass="19375" checksum="613FD554B42647FE" modified="2014-02-19" version="1">MFNVRNVKVGKPSPSLTMADPYGGGKALFSVLFLMLVFAASCSEASNSMWGALLHPKLRVNITSKIPGEVVRIKCISSENDVEKGFLDSTSTEPFTFDVQLKLLTTIRYNCLLRQGKREIGQFLGFRSGSYCEKGCIWELYTTYAVRTSSRNGYVNQTYKPIGSPDDYIYDYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C981</accession>
    <name>V7C981_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G039800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YABBY family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C981"/>
    <dbReference type="SMR" id="V7C981"/>
    <dbReference type="STRING" id="3885.V7C981"/>
    <dbReference type="Gramene" id="ESW25481">
        <property type="protein sequence ID" value="ESW25481"/>
        <property type="gene ID" value="PHAVU_003G039800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVCI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDDKLTM"/>
    <dbReference type="OrthoDB" id="667577at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045165">
        <property type="term" value="P:cell fate commitment"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010582">
        <property type="term" value="P:floral meristem determinacy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
        <property type="term" value="P:leaf development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010254">
        <property type="term" value="P:nectary development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048479">
        <property type="term" value="P:style development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00084">
        <property type="entry name" value="HMG-box_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.30.10:FF:000053">
        <property type="entry name" value="Protein CRABS CLAW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.30.10">
        <property type="entry name" value="High mobility group box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036910">
        <property type="entry name" value="HMG_box_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006780">
        <property type="entry name" value="YABBY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056775">
        <property type="entry name" value="YABBY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056776">
        <property type="entry name" value="YABBY_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31675:SF1">
        <property type="entry name" value="PROTEIN CRABS CLAW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31675">
        <property type="entry name" value="PROTEIN YABBY 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04690">
        <property type="entry name" value="YABBY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24868">
        <property type="entry name" value="YABBY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47095">
        <property type="entry name" value="HMG-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="YABBY N-terminal" evidence="9">
        <location>
            <begin position="14"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="YABBY protein C-terminal" evidence="8">
        <location>
            <begin position="103"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="82"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="87"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF24868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="173" mass="18978" checksum="3D0D29DF6CDC2B75" modified="2014-02-19" version="1">MNHDDKLTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPNSQNQSIDHTLSLQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVSASKVNTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9A3</accession>
    <name>V7C9A3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G041600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9A3"/>
    <dbReference type="Gramene" id="ESW25501">
        <property type="protein sequence ID" value="ESW25501"/>
        <property type="gene ID" value="PHAVU_003G041600g"/>
    </dbReference>
    <dbReference type="OMA" id="EVVGCQI"/>
    <dbReference type="OrthoDB" id="1698776at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW25501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="59" mass="6118" checksum="033F1FC46BA58BD2" modified="2014-02-19" version="1">MNGAKRSAEVVGCQIKLVGEHSALEGRTCASSAGRSGSENVGLSNTNVGSYYLLEESIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9C6</accession>
    <name>V7C9C6_PHAVU</name>
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        <recommendedName>
            <fullName evidence="1">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G042900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9C6"/>
    <dbReference type="SMR" id="V7C9C6"/>
    <dbReference type="STRING" id="3885.V7C9C6"/>
    <dbReference type="Gramene" id="ESW25521">
        <property type="protein sequence ID" value="ESW25521"/>
        <property type="gene ID" value="PHAVU_003G042900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1454">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLLIWGE"/>
    <dbReference type="OrthoDB" id="6431331at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43689:SF33">
        <property type="entry name" value="ALPHA_BETA FOLD HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43689">
        <property type="entry name" value="HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="86"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="343" mass="38407" checksum="5BAA90667FE1DC1C" modified="2014-02-19" version="1">MFFSVSIGSSAALRFPLRCNAKISSPRVVAADAFPSFLPKELHTIEDPFARKLAMRIQRLPVPVRFSENPIMSSCVKPVVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVESKRDHFYQFWKCYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSFPLRLYATYLTFTNISFGTSLDWTNVGRLHCSLPWWNDATVDFMTSGGYNVAPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDASIRQIPHCGHLPHLERPDSTIKLIVEFVQQREAKKLNPYVAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9E8</accession>
    <name>V7C9E8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Afadin-and alpha-actinin-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G145300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ADIP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9E8"/>
    <dbReference type="SMR" id="V7C9E8"/>
    <dbReference type="STRING" id="3885.V7C9E8"/>
    <dbReference type="Gramene" id="ESW26754">
        <property type="protein sequence ID" value="ESW26754"/>
        <property type="gene ID" value="PHAVU_003G145300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCVYALI"/>
    <dbReference type="OrthoDB" id="312015at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021622">
        <property type="entry name" value="Afadin/alpha-actinin-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47057">
        <property type="entry name" value="AFADIN/ALPHA-ACTININ-BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47057:SF1">
        <property type="entry name" value="AFADIN_ALPHA-ACTININ-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11559">
        <property type="entry name" value="ADIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="82"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="215"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="299"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW26754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="378" mass="43501" checksum="A339B72DE000FA93" modified="2014-02-19" version="1">MPPTEGDFDLRQPSQSALASGEYTFADVENLEHCAKYINQSLVTFGFPASLDLFANDPVSIARTCNCIYFLLQQRQRDVEFRESANDQRQRLLSDISRLEAKVERLEGQLQVKDREIATITRTEAKNTAALKAQIEKLQQERDEFQRMVIGNQQVKTQQLHEMKKKEKEYIKLQEKLNQVLMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKADNDFYKKIVDAYEAKNQELMAENTDFRALLRSMQVDMRDFLNAPNGLPKQSLTGNERVESDPLQSPLVGKMDVFDLPFHMARDQIEESLRNKMTSIKERMVQLQDAQKEAEVTSEATERELELEAQLVEARSIIQEQASIMSKHIAKSDRPRESIIPAPAEAVCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCS3</accession>
    <name>V7CCS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G172800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Mitochondrion intermembrane space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the MICU1 family. MICU1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCS3"/>
    <dbReference type="SMR" id="V7CCS3"/>
    <dbReference type="STRING" id="3885.V7CCS3"/>
    <dbReference type="Gramene" id="ESW27090">
        <property type="protein sequence ID" value="ESW27090"/>
        <property type="gene ID" value="PHAVU_003G172800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2643">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEPAYPM"/>
    <dbReference type="OrthoDB" id="186625at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005758">
        <property type="term" value="C:mitochondrial intermembrane space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990246">
        <property type="term" value="C:uniplex complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036444">
        <property type="term" value="P:calcium import into the mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051560">
        <property type="term" value="P:mitochondrial calcium ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15900">
        <property type="entry name" value="EFh_MICU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039800">
        <property type="entry name" value="MICU1/2/3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12294:SF1">
        <property type="entry name" value="CALCIUM UPTAKE PROTEIN 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12294">
        <property type="entry name" value="EF HAND DOMAIN FAMILY A1,A2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00036">
        <property type="entry name" value="EF-hand_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13833">
        <property type="entry name" value="EF-hand_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0109">Calcium transport</keyword>
    <keyword evidence="10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="7" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="9" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="EF-hand" evidence="14">
        <location>
            <begin position="217"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="14">
        <location>
            <begin position="409"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW27090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="471" mass="53957" checksum="E8C98AC2AA62E9E3" modified="2014-02-19" version="1">MFSLGRKFQLSLRHNVRSFCSQSQGSTSSSSSFSSFVGPTHGEERIRDFDTFLKAITSGMVVVGSTLGFWYWSSLSSPGANSLQSFSDFANQDQLQQKRQSKPSRFLFNDNYRRRVFFNYEKRIRMLSPPEKVFEYFASVRSPGGEVFMTPADLMRAIVPVFPPSESTRVREGFLRGEQVPGELQCEPSQFFMLFDTNNDGLISFAEYIFFVTLLSIPESSFSVAFKMFDIDNNGEIDRREFKKVMALMRSRNRQGANHRDGRRLGSKDSVENGGLLEYFFGKHGNSCLQHERFVQFLRQLHDEILRLEFSHYDYNKRGSISAKDFALSLVASADVNHISKLLDRVEELNRDQQLRDLRLTYREFQDFAELRKKLQSFSLAIFSYGKVNGVLTKTDFQRAASNVCGVCITDKVVDIIFHVFDANRDGNLSVSEFVRVLQRREDISSGSGFKGLITCWLKCVKNCPTTNLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD06</accession>
    <name>V7CD06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Maf-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G253800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD06"/>
    <dbReference type="SMR" id="V7CD06"/>
    <dbReference type="STRING" id="3885.V7CD06"/>
    <dbReference type="Gramene" id="ESW28039">
        <property type="protein sequence ID" value="ESW28039"/>
        <property type="gene ID" value="PHAVU_003G253800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1509">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DYQKEDN"/>
    <dbReference type="OrthoDB" id="10267058at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00555">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.950.10:FF:000008">
        <property type="entry name" value="Maf-like protein, expressed"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00528">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003697">
        <property type="entry name" value="Maf-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43213:SF4">
        <property type="entry name" value="7-METHYL-GTP PYROPHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43213">
        <property type="entry name" value="BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02545">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006305">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="ITPase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="204" mass="22112" checksum="09F0DF316F3A43AA" modified="2014-02-19" version="1">MPTENPPFKIILGSSSNARREILSEMGYEFTIMTADIDEKSIRREKPEDLVMVLAEAKADAIVQRLPAGGRLEEDDSTTLLITADTVVVYQGIIREKPTSEKEAREFIKGYSGSHAAVVGSVVVTNLATGKRVGGWDSAEVYFLEIPDEVIDSLIDEGITFNVAGGLMLEHPLTLPFVDAVVGSTDTVMGLSKALTEKLLLEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEV2</accession>
    <name>V7CEV2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CRAL-TRIO domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G202500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEV2"/>
    <dbReference type="SMR" id="V7CEV2"/>
    <dbReference type="STRING" id="3885.V7CEV2"/>
    <dbReference type="Gramene" id="ESW27445">
        <property type="protein sequence ID" value="ESW27445"/>
        <property type="gene ID" value="PHAVU_003G202500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW27446">
        <property type="protein sequence ID" value="ESW27446"/>
        <property type="gene ID" value="PHAVU_003G202500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1470">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDNDIWI"/>
    <dbReference type="OrthoDB" id="75724at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd00170">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.525.10">
        <property type="entry name" value="CRAL-TRIO lipid binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001251">
        <property type="entry name" value="CRAL-TRIO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036865">
        <property type="entry name" value="CRAL-TRIO_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036273">
        <property type="entry name" value="CRAL/TRIO_N_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47556">
        <property type="entry name" value="SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47556:SF1">
        <property type="entry name" value="SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00650">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00516">
        <property type="entry name" value="SEC14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52087">
        <property type="entry name" value="CRAL/TRIO domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46938">
        <property type="entry name" value="CRAL/TRIO N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50191">
        <property type="entry name" value="CRAL_TRIO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CRAL-TRIO" evidence="1">
        <location>
            <begin position="108"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="259" mass="29830" checksum="637CE15070A903B1" modified="2014-02-19" version="1">MTIMRTLYPTVAAPPLSNFSVRTNFPVRCSNLHSQPQLDSRKLVLSVKEKLEKEHHSLPVGKNGRDDEDMILWFLKDRKFSVEKAISKLTKAIKWRQDFEVSKLTDETVKDAAQTGKGYVHDFLDINGRPVLVVVGSKHIPMALDPADDERLCVFLIEKALSKLPPGKEQILGIVDLRGFRTENADLKFLTFLFDVFYCYYPKRLGQVLFVDAPFVFKPIWQLVKPLLKSYTSLVRFCSAETVRKEYFTEETLPPNFRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEY8</accession>
    <name>V7CEY8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G236600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEY8"/>
    <dbReference type="SMR" id="V7CEY8"/>
    <dbReference type="Gramene" id="ESW27840">
        <property type="protein sequence ID" value="ESW27840"/>
        <property type="gene ID" value="PHAVU_003G236600g"/>
    </dbReference>
    <dbReference type="OMA" id="QVQQCRY"/>
    <dbReference type="OrthoDB" id="10422854at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8765" checksum="8C930212D9CF5230" modified="2014-02-19" version="1">MRLEACERNPSALTNVIEVLWRRCLRQVQQCRYIKQRVKKGEEIKKYSCLKTNIIRAYVIVKGLKVASCVPPTVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFA1</accession>
    <name>V7CFA1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G019900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFA1"/>
    <dbReference type="STRING" id="3885.V7CFA1"/>
    <dbReference type="Gramene" id="ESW28809">
        <property type="protein sequence ID" value="ESW28809"/>
        <property type="gene ID" value="PHAVU_002G019900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0SE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HADYEEC"/>
    <dbReference type="OrthoDB" id="2015035at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052796">
        <property type="entry name" value="Nod_factor_sulfotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32175">
        <property type="entry name" value="PROTEIN, PUTATIVE, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32175:SF20">
        <property type="entry name" value="SULFOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="39623" checksum="4C194D2F08B36BB8" modified="2014-02-19" version="1">MVEDICLFYKEVLVMKPPKRSPMLLRTAVVMFSMVCGVFIFSACLKQISTQARTTFVDFKVIDNHAQSRLKLMNTPHLLHYPKPASFSRNECAHNPVLFFAILSNQRSGSGWFETLLNSHTNVSSNGEIFSVRERRKNVSSILQTLDKVYNLDWFNSASKNECSAATGLKWMLNQGLMEHHEEIAEYFDLRRISVIFLFRRNLLRRMVSMLANSYDRYAKLLNGTHKAHVHSAEEADILSKYKPIINSTSLLDDLKDMEMRSAKALEYFNSTRHIIVYYEDLMRNHTKLKDVQGFLGLPQMELTSRHVKIHRGPLSDHIQNWDDVNKTLKGTVYESFLEADY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFR1</accession>
    <name>V7CFR1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF506 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G035300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFR1"/>
    <dbReference type="STRING" id="3885.V7CFR1"/>
    <dbReference type="Gramene" id="ESW28994">
        <property type="protein sequence ID" value="ESW28994"/>
        <property type="gene ID" value="PHAVU_002G035300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTG7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IYWESQE"/>
    <dbReference type="OrthoDB" id="747933at2759"/>
    <dbReference type="PhylomeDB" id="V7CFR1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006502">
        <property type="entry name" value="PDDEXK-like"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01615">
        <property type="entry name" value="A_thal_3542"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31579:SF49">
        <property type="entry name" value="DUF506 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31579">
        <property type="entry name" value="OS03G0796600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04720">
        <property type="entry name" value="PDDEXK_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW28994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="261" mass="30465" checksum="529E6C552B60B95D" modified="2014-02-19" version="1">MDSLEEQVFMFIDEQYYHYHSNFSNESELQVEEDLWWQDNSDSDDSSQRTLYWESQVALLQEILEHYSQSGSKLRREVGRIIEEVKGSDFCSCYKANFLDCSTCLRREIVTKLRDRGFTTNLCVSKWETTKKFPGGCHEYIEVFANTSSKKNQIRILIELELREQFQIAKASENYQDLVSCLPEFYIGKPEFLTAIIRVMCNAAKKSMKEKKMHVGPWRKSSFMKMKWAEFNQTLNNKSFGTHTTQSYLGISGAHTPVVVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG88</accession>
    <name>V7CG88_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G281300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG88"/>
    <dbReference type="SMR" id="V7CG88"/>
    <dbReference type="STRING" id="3885.V7CG88"/>
    <dbReference type="Gramene" id="ESW28373">
        <property type="protein sequence ID" value="ESW28373"/>
        <property type="gene ID" value="PHAVU_003G281300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQIQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TITENHC"/>
    <dbReference type="OrthoDB" id="1932168at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048658">
        <property type="term" value="P:anther wall tapetum development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18918">
        <property type="entry name" value="bHLH_AtMYC1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045895">
        <property type="entry name" value="bHLH91-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045896">
        <property type="entry name" value="MYC1-like_bHLH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46834:SF1">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46834">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH91"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="5">
        <location>
            <begin position="218"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="416" mass="46186" checksum="5ABB00EAB4EB8E15" modified="2014-02-19" version="1">MYEESSCFDPNGMVAEDCFSQMVSKSEAVMSVSSIQPQNTFGMENLAYTYSSGEDASAVAMEIIAHPQQNSYNQVNNLNPQFVQVVNNHASCEELYSFPPHSSTLERGHHDHQFPYSTPTPDLLNLLHLPITFENQSSNLPKPSGPMGTADSTNVSSVSYDPFLHLNLRAPPPALRNDFAFGGGGGAIEGSGIAYQDFGNGVVELTQDVGKKRGGKRTKQFTSTTTERQRRVDLSSKFDALKELIPNPSKSDRASVVGDAINYIRELKRTVDELKLLVEKKRHEKQRVVVMMRHKVETEGQEDSNLDPDDGSYNESLRSSWIQRKNKDTEVDVRIVDNEVTIKLVQRKKMDCLVHVSQVLDQLNLDLQHVAGGHIGDFCSYLFNTKMCDGSCVYASAIANKLIQVMDTSLVAESLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIG1</accession>
    <name>V7CIG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G007400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIG1"/>
    <dbReference type="SMR" id="V7CIG1"/>
    <dbReference type="STRING" id="3885.V7CIG1"/>
    <dbReference type="Gramene" id="ESW28666">
        <property type="protein sequence ID" value="ESW28666"/>
        <property type="gene ID" value="PHAVU_002G007400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHAYDHI"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080090">
        <property type="term" value="P:regulation of primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052610">
        <property type="entry name" value="bHLH_transcription_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959:SF51">
        <property type="entry name" value="BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="165"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="80"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="124"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="51"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="93"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="146"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="336" mass="37460" checksum="53B9CDA91DF562EA" modified="2014-02-19" version="1">MDASEPNWFSDFETEDCNLFRQCQLEIEDDEELLSLEIASALENFPPPQHQQPFSSESHTSYSETSNLVRPAKQLKTNLSSWNSSPITDKHFSPNISSSTSSSPTSQIMLPVENTQLHGIVSAVLSPQQNKGVSVSPPETRKRSSENPNYETKSPKSQGSFKTSGHGGDHIIAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIRYVKELQERQKTLEENKNRDDVGSVVMVNKARLSYRDGCGRASLPRVEARVSEKDVLLRIHCQKQKGLLLKILVEIQNLHLFVVNSSVLSFGDSIIDITIVAQMGTDYKLTINELVKNLRRATLKSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ63</accession>
    <name>V7CJ63_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">glucose-6-phosphate 1-epimerase</fullName>
            <ecNumber evidence="3 5">5.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G031900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>alpha-D-glucose 6-phosphate = beta-D-glucose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:16249"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="ChEBI" id="CHEBI:58247"/>
            <dbReference type="EC" id="5.1.3.15"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glucose-6-phosphate 1-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.15" evidence="3 5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ63"/>
    <dbReference type="SMR" id="V7CJ63"/>
    <dbReference type="STRING" id="3885.V7CJ63"/>
    <dbReference type="Gramene" id="ESW28956">
        <property type="protein sequence ID" value="ESW28956"/>
        <property type="gene ID" value="PHAVU_002G031900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1594">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNWSITD"/>
    <dbReference type="OrthoDB" id="1659429at2759"/>
    <dbReference type="PhylomeDB" id="V7CJ63"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047938">
        <property type="term" value="F:glucose-6-phosphate 1-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09020">
        <property type="entry name" value="D-hex-6-P-epi_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025532">
        <property type="entry name" value="G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11122">
        <property type="entry name" value="APOSPORY-ASSOCIATED PROTEIN C-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11122:SF39">
        <property type="entry name" value="GLUCOSE-6-PHOSPHATE 1-EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016020">
        <property type="entry name" value="PHexose_mutarotase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="Galactose mutarotase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="6">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR016020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR016020-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="313" mass="34204" checksum="939D0F060A022CC0" modified="2014-02-19" version="1">MAMVSMAFSVQTPTLPNRCRFNRRRGMAYASLSNKASASLGVRLTEGEGNLPKLVLSSPAGSEVEIYLFGGCITSWKVPSGKDLLFVRPDAVFNQKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTVVDSESAEGNPVVTLELKDAPYSRAIWDFSFHALFKVALNAKSLSTELTVKNTDSKAFSFSTALHTYFRASASDASVKGLQGCKTLNKNPDPKSPVEGTEERDVVTFPGFVDCVYLDASSELQLDNGLGDLISIKNTNWSDAVLWNPYLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMF7</accession>
    <name>V7CMF7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G161600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMF7"/>
    <dbReference type="SMR" id="V7CMF7"/>
    <dbReference type="Gramene" id="ESW30543">
        <property type="protein sequence ID" value="ESW30543"/>
        <property type="gene ID" value="PHAVU_002G161600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1650">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NFMLFTG"/>
    <dbReference type="OrthoDB" id="2687058at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006885">
        <property type="term" value="P:regulation of pH"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1530.20:FF:000003">
        <property type="entry name" value="Cation/H(+) antiporter 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057291">
        <property type="entry name" value="CHX17_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057290">
        <property type="entry name" value="CHX17_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050794">
        <property type="entry name" value="CPA2_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468">
        <property type="entry name" value="CATION/H + ANTIPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32468:SF34">
        <property type="entry name" value="CATION_H(+) ANTIPORTER 18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23256">
        <property type="entry name" value="CHX17_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23259">
        <property type="entry name" value="CHX17_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0050">Antiport</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="4" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="62"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="160"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="195"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="225"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="266"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="344"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="376"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="408"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H+ exchanger transmembrane" evidence="12">
        <location>
            <begin position="51"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter central" evidence="13">
        <location>
            <begin position="483"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H(+) antiporter C-terminal" evidence="14">
        <location>
            <begin position="626"/>
            <end position="779"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00038341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF23256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF23259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW30543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="802" mass="86567" checksum="B0CF2021D5F80FCA" modified="2014-02-19" version="1">MASNATSGNACPAPMKAISNGVFQGDNPLDFALPLAILQICLVLVVSRGLAYLLKPLRQPRVIAEIIGGILLGPSALGRSKSYMQAVFPSRSLTVLDTLANIGLIFFLFLAGLELDLKSLRQSGHRVLAIAMAGISLPFVMGIGSSFVLKQSIAKGSDSAAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHERSPLVSLWVFLAGCGFVICASIIVPPIFKWVSQRCHEGEPVEEIYICATLAAVLAAGFVTDAIGIHAMFGAFVVGILIPNDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGLQSWGLLVFVIFTASFGKILGTTVVSLLCKVSLNDALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFVTTPLVTAIYKPARKRSDYKYRTIWRKNANSQLRILACFHCARNIPSMINLIEASRGIQKRDGLCMYAMHLKEFSERSSSILMVHKARRNGLPFWNKGCHSHSDQVIVAFEAYRQLGQVSIRPMTAISSMANIHEDICETAERKEAAVIILPFHKHQSLDGSLNTTRNDFRGVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDQEALAYGGRMAEHPGIKLVVIRFVVEPPNEGEILRVDVDDSSSGTTSISQDEKFLDEFKVKTANDDSIIYEERRVKNTAETIAIIHEFNSSSLFLVGSRPVSEVASALKSSECPELGPVGGLLASHDYPTTASVLVIQQYNNGAPINFTSEMEEHLPDGDSGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR30</accession>
    <name>V7CR30_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G261800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR30"/>
    <dbReference type="SMR" id="V7CR30"/>
    <dbReference type="STRING" id="3885.V7CR30"/>
    <dbReference type="Gramene" id="ESW31715">
        <property type="protein sequence ID" value="ESW31715"/>
        <property type="gene ID" value="PHAVU_002G261800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPYU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTYSYAT"/>
    <dbReference type="OrthoDB" id="62120at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015629">
        <property type="term" value="C:actin cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051017">
        <property type="term" value="P:actin filament bundle assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016477">
        <property type="term" value="P:cell migration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007163">
        <property type="term" value="P:establishment or maintenance of cell polarity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00257">
        <property type="entry name" value="beta-trefoil_FSCN-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.80.10.50:FF:000056">
        <property type="entry name" value="Glucan 1,3-beta-glucosidase A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000067">
        <property type="entry name" value="Glucan 1,3-beta-glucosidase A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008999">
        <property type="entry name" value="Actin-crosslinking"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057232">
        <property type="entry name" value="DUF7910"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010431">
        <property type="entry name" value="Fascin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10551">
        <property type="entry name" value="FASCIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10551:SF13">
        <property type="entry name" value="GLUCAN 1,3-BETA-GLUCOSIDASE ARB_04467-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25490">
        <property type="entry name" value="DUF7910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50405">
        <property type="entry name" value="Actin-crosslinking proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="DUF7910" evidence="7">
        <location>
            <begin position="77"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 5" evidence="6">
        <location>
            <begin position="245"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF25490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW31715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="523" mass="58855" checksum="C9DEB917C6FE997F" modified="2014-02-19" version="1">MLYTLSSCVALTPHTKKCCKMSNQLFYANLVLAFYLSCHYALAQTENFNLPLKAVNLGNWLVIEGWMKPSLFDGIPNKDLLDGTQVQLMSTKLQKYLCAENGGGSIVVANRTKASGWETFRLWRVNETAFNFRVSSKQFVRLTNQDEGNSLVADSDSPSDMETFEILRNDDDPNRVRIRAPNGLFLQAISETVVLADYEGSSWDDNDPSVFKMNVLTGSTLRGEYQITNGYGPDKAPKIMQDHRNTYITEDDFKFMSENGLNGVRIPVGWWIAQDPTPPKPFVGGSLEILDNAFTWAEKYGIKVIVDLHAAPGSQNGKPHSASRDGHVEWGDSYISDTVAAIDFLAERYANRSGLVAIELMNEPQGVNLESLKSYYQAGYDAVRKHTSSAYVIMSNPLDRESKVLLSFAGAFSKVAIDVHYYNLFSDRFSNMNVQQNIDYVKNQRASDLSSLTTSNGPLIFVGEWSGDWKVQRASKQSQQKFVKAQLDVYSGAKFGWAYWAYKCDSNSWDIKWMIENDYVRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSF1</accession>
    <name>V7CSF1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G299700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the AAA ATPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSF1"/>
    <dbReference type="SMR" id="V7CSF1"/>
    <dbReference type="STRING" id="3885.V7CSF1"/>
    <dbReference type="Gramene" id="ESW32175">
        <property type="protein sequence ID" value="ESW32175"/>
        <property type="gene ID" value="PHAVU_002G299700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0731">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YEIERHM"/>
    <dbReference type="OrthoDB" id="2016698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045037">
        <property type="term" value="P:protein import into chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19501">
        <property type="entry name" value="RecA-like_FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000083">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000352">
        <property type="entry name" value="ATP-dependent zinc metalloprotease FTSH 7, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.760:FF:000011">
        <property type="entry name" value="Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="entry name" value="Peptidase M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076:SF111">
        <property type="entry name" value="INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23076">
        <property type="entry name" value="METALLOPROTEASE M41 FTSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="FtsH protease domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="263"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="354"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="AAA+ ATPase" evidence="12">
        <location>
            <begin position="441"/>
            <end position="588"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="919" mass="103357" checksum="75D8FCD06C213477" modified="2014-02-19" version="1">MNILSSPHFHVTKSYYHHRHGPPKQTPRRVPTLLLRRRPPTVLCNSSSASGEPGSDDFVSRVLKENPSQMQPKYLIGDKLYTLKEKESLGKVSRLGIFDVLKRLNPTKPQSKSESDVSGEGNSVYLKDLLKEYRGKLYVPEQIFGSELSEEEEFNRAVNELPRMSVEEFSKSLSKDKVRLITSKGGANTDFVVELKEIPGDKSLHTTKWVLRLGKGEAREVLADYNGPRYEIERRHAMSWVGKTPEYPHPVASSISSRVMVELAVVSVFMGLAATLVGGFIAAALFAATSFVFVVTAYVVWPISKPFLKLFLGLALAILEKIWDNIVDFFSDGGIFSKIFELYTFGGISASLEALKPIMIVVLTMVLLVRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFCDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVVFIDEIDALATKRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRKDLLDPALLRPGRFDRKIRIRPPGSKGRHDILKIHAGKVKMSESVDLSSYAQNLPGWSGARLAQLVQEAALVAVRKRHNSILQSDMDDAVDRLTIGPKLIGIDLGYQGQCRRATTEVGVALTSHLLRRYEHAIVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGRDTSKASTDYLADASWLARKILTIWNLENPMVIHGEPPPWRKSVKFVGPRLDFEGSLYDDYNLIQPPLNFKMDDQVAQRSEELIRDMYLKTVSLLRRHHAALLKTVKVLLDQEEIRGEEIEFILDKYPPQTPLYLLEEEYAANLPLTKEVHDLEYALKTQSKEETT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTD6</accession>
    <name>V7CTD6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G071000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTD6"/>
    <dbReference type="SMR" id="V7CTD6"/>
    <dbReference type="STRING" id="3885.V7CTD6"/>
    <dbReference type="Gramene" id="ESW33457">
        <property type="protein sequence ID" value="ESW33457"/>
        <property type="gene ID" value="PHAVU_001G071000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="STTFTHH"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000121">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000254">
        <property type="entry name" value="transcription repressor MYB5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB8-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999:SF77">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR MYB5-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="50"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="50"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="103"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="103"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="363" mass="40314" checksum="7B4CFED47A5D16D9" modified="2014-02-19" version="1">MRNPSSTSTTKNKKSGGNSTATSCSNNSNNNNGSSSNNNGSSNNTPCCTKVGLKRGPWTPEEDEVLANYIKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPPSIIIPSSSTTTTFTVPPPSMPPPMIINPCHDLTAVDQGIHAIHHLGQHHQPPVSNPFDNNSINNQVAAVTDDVSAMGFMDSEDCNYDININYYSDDAFSSFLNSLINDDAFASQQHHVQTELPSERCIPLPCDDRVDDPLVSITTASTSQGYDDDLGVLWESPLVPSTTFTHHVNDPIIKMAHDHHHLHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWL0</accession>
    <name>V7CWL0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">t-SNARE coiled-coil homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G158900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE associated with ER-derived vesicles.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the BET1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWL0"/>
    <dbReference type="SMR" id="V7CWL0"/>
    <dbReference type="STRING" id="3885.V7CWL0"/>
    <dbReference type="Gramene" id="ESW34514">
        <property type="protein sequence ID" value="ESW34514"/>
        <property type="gene ID" value="PHAVU_001G158900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34515">
        <property type="protein sequence ID" value="ESW34515"/>
        <property type="gene ID" value="PHAVU_001G158900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3385">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GHRNYMC"/>
    <dbReference type="OrthoDB" id="261831at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15853">
        <property type="entry name" value="SNARE_Bet1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000033">
        <property type="entry name" value="bet1-like SNARE 1-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039899">
        <property type="entry name" value="BET1_SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12791">
        <property type="entry name" value="GOLGI SNARE BET1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00397">
        <property type="entry name" value="t_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58038">
        <property type="entry name" value="SNARE fusion complex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="8" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="14">
        <location>
            <begin position="34"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00037962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00060029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW34514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="14253" checksum="1BD93643DA33C96A" modified="2014-02-19" version="1">MNARRDNRNNRVSLFDGIEEGGIRAQSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLIIYYLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZ75</accession>
    <name>V7CZ75_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G132700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZ75"/>
    <dbReference type="Gramene" id="ESW34196">
        <property type="protein sequence ID" value="ESW34196"/>
        <property type="gene ID" value="PHAVU_001G132700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIECCEN"/>
    <dbReference type="OrthoDB" id="2018467at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041118">
        <property type="entry name" value="Rx_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF61">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18052">
        <property type="entry name" value="Rx_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance N-terminal" evidence="6">
        <location>
            <begin position="11"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="NB-ARC" evidence="5">
        <location>
            <begin position="194"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="7">
        <location>
            <begin position="441"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="8">
        <location>
            <begin position="577"/>
            <end position="801"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF18052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW34196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="863" mass="99742" checksum="8A694C24C3E3857F" modified="2014-02-19" version="1">MAEYFVFEIAESLLGKLASNLYEEVSRAFDLYEDVQGLRDTLLIVKGLLLDAEEKKEKKHGLREWLRQIQNVCLDPEDLLDGFESQSLRKQVLKASGSTRMKVDHFFSSSNSLVFRFRMARQIKNVRRRLDKIAADGSKFGLEKIDIDQSCLQRREMTYSHVDASRVIGREKNREEIMKLLMQPHLHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFPLKMWVCISDDFDIRQIIVKIINSASDPIISAVPQESINNLDIEQLQSRLRHKLSYQKYLLVLDDVWNENRSKWIELKDLIKVGAIGSKIIVTTRSHSIASMMGTVPSYVLEGLSAENCLSMFLKWPFREGEEKEHPNLVEIGKEIVKKCGGVQLALKTSGSSLFSVFDLERWEIMRDHELLNLKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFAFTSAEMANFWVTLGLLRSAFGSQQIENVGKLYIYELYSRSFLEDFLDFGTHYYFKLHDLVHDLSLYVAKEEFLMVNSHTHKIPEQIRHISVVENDSLSHTLFPKFRGVRTIIFPVDGVGVGSEYLLETWIKRYKYLRHLDLSDSSFETFPNSIAKLEHLRALSLDNNCSIKRLPNSFCKLQNLQILYLRRCLGLETLPKRLGMLISLRKLYITTKQSMFLHSLIFEYCDNLKFLFRGAQTQLPSLEVLMIQSCENLESLPLHLLPKLEVLILTRCVMLNLSLISERPIQRLMIKNLYIEQYKCDFSCSGLHTLPQWIQGASNTLRTLSILNCHCLEKLPEWLNTMTHLKMLHIMHRLGALEDLIIDGCPELGQKCEPQSGEYWSFIAHIKCVSIGETKKRKLLFQMLSRLRLNCTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZR7</accession>
    <name>V7CZR7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G178200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZR7"/>
    <dbReference type="STRING" id="3885.V7CZR7"/>
    <dbReference type="Gramene" id="ESW34755">
        <property type="protein sequence ID" value="ESW34755"/>
        <property type="gene ID" value="PHAVU_001G178200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S10P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YIPCTEH"/>
    <dbReference type="OrthoDB" id="1840940at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374">
        <property type="entry name" value="AUXIN-INDUCED PROTEIN-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374:SF9">
        <property type="entry name" value="AUXIN-RESPONSIVE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="14439" checksum="3DC8CEAA78C7D8A1" modified="2014-02-19" version="1">MKGKFLRGCLNKWKKVGSRVIHCGAYDYCCEWEVWPSMHDEGECDIPNDVPKGHLVVYVGEHHKRYVIKITLLNHPLFKTLLDQAQDEYDFIAYSKLYIPCTEHLFLTVLRSASSPNNQPLSLSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZV5</accession>
    <name>V7CZV5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G193300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="4">cv. G19833</strain>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="entry name" value="OS04G0382800 PROTEIN"/>
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            <dbReference type="EMBL" id="ESW34938.1"/>
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</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0R9</accession>
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            <fullName evidence="16">PHD-type domain-containing protein</fullName>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
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    </organism>
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        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
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                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
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                <person name="Wang M."/>
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                <person name="Wing R.A."/>
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        <property type="entry name" value="DNA HELICASE CHROMATIN REGULATOR PHD FAMILY-RELATED"/>
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        <property type="entry name" value="ZF_PHD_2"/>
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    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
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            <end position="108"/>
        </location>
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        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
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    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50013"/>
        </source>
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        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW34751.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="16">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1572" mass="177585" checksum="7DF9CAAF99969592" modified="2014-02-19" version="1">MKDTTTENHTAVYDMSHQTLVMDEDGGDARSKCIEGLAKEYTNNAQANSHVKDKNRGKDVVCSNCLGGGVLLCCSGKGCQKRYHPSCVDPPLKYIPLRFWHCIWCTKKKKEFGVHSVSEGVKSILDSREVVSNNKVMQREYFVKYQGLAHAHNRWITESIMLLEAPKLLAKFKSKLQVTRWKRYWSIPHRLLLKREIVHFDGHGDNDSVCCYEWLVKWTGLGYDNATWELQDASFLTSAKGRKLIHDYESRRKKVDKLSKSHFEDNEERKTFVAELSVLSFGYSRGLYNQYLSYVNKLRMSWHKGQNALIVDDQIDQERIIKVILFVLSLNCNSKRPFLIISTCTALSVWETEFLHLAPSANLVVYKGNRDVRSGIRALEFFNEENGILFQILLSSSDIVVKDLHELRCIPWEAIIIDECLQSRISGHLDSIKILKTEMKLLLVSGQIKEDRSDYIKLLSFLESAHHGSSITPIETSFNASISNLKSQLEKYVVFKCKSGSTRFVEYWVPACLSHLQLEQYCSILLSNLMLLCSGQKTDSVDALHELIISTRKCCDHPYLLEPALHNSVVQGLPVEEHLDIGIKASGKLLLLEKILLEAKRLGLRVLILFQSTSGSGSIGDILDDVLCQRFGKDCYVRYGRAYTPKTKEAALDTFNDRDSGKFVFLMENRACLSSVKLSSVDTVILFDSDFDPQNDLRGLQRMSISSKLKQLTVFRLYSYYTVEEKFLMLAKEGISLDSNVRLISQSISHTLLKWGTSHLFNKLDDLHASVTSVSTPDIADQSLLHDVLCELSSQLVCGADDIDCHEWSFISTIQQNGGDYARNILLLGERIMKGLGSEPRAFSWSDLQGRYPQWKFLSVSSQRMRSRAKHFDYILNESDCEDHTIIGKRTSSNASKKRKVSRDDVDHNLKKLTKDKVDPNWRKASKDVVETEGRELSNHAIDPKTRKVFNDIVDSWGRKMSKNIQPRSRSKKNSSVANRASKSNGHPLANATTGGTAANMQLSEKRKLHDGPNSIKFLPKSNVSGLCDILHFPKNVKVVALRILEDIFKHYNVNCQEVSTVQAFEISVCWLAASLLKHEIDRKDSLTLAKLCLNFNCNEEEATDVYSELWKHVKKFSNYIPNGPCVEKYNTNGASETTMPELNNLTEERQNDFLDTCVTKLVKSVNNEHDLTMKSPTTGVSCDQTFTLGICSFPNTPTSFPVEAISLSLEFGSEDDIMESTPLIAAEDSALEHGGNDVNPLTDYLEKQSPIRSTDITQSDGKVCEDPQVLMNELVAIENAMNMSTHSLQLDSVEANAVTSIGSAVPEARLWGSVMSPVCNESIGLKFAETTLYTQPSDANLWPLPQIATSDIPSIPEHNSASTVTPLDDIFYHNREDHCYIHEAEVILEAPNDLVEPVNSSFGSPVILQPFTSVAMNENMTHVPDSFTIPGYMNSGYFQHHHVASEISHLAYLDSLLDEMERIENTNEEAFIDPLLIEIERIEKDNEEAFKIHEQKISLLRSEYEKEVEKLSEKYRILLQNVDTEGALKKMELETQCKLVLSSEVLAEVWIHMLDGCERAVGQCSEQERNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2F0</accession>
    <name>V7D2F0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G255100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2F0"/>
    <dbReference type="Gramene" id="ESW35675">
        <property type="protein sequence ID" value="ESW35675"/>
        <property type="gene ID" value="PHAVU_001G255100g"/>
    </dbReference>
    <dbReference type="OMA" id="RGWCPSN"/>
    <dbReference type="OrthoDB" id="1415541at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="108" mass="12099" checksum="54B58AB5BC4E0AA0" modified="2014-02-19" version="1">MGSQYRGWCPSNDYHVHEVTGPALRKRSDRPLHQKGRVAFKSILEEPITVAAEAAPVPDNPVPQTHHETPTATNHASGFRSVDQKADAFIKREHRRIELARLKSLGQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2006-12-12" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>A0JJX6</accession>
    <name>A0JJX6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Gamma-thionin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G158000g</name>
    </gene>
    <organism evidence="7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2006-10" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Lioi L."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="7">Leaf</tissue>
        </source>
    </reference>
    <reference evidence="7" key="2">
        <citation type="submission" date="2006-11" db="EMBL/GenBank/DDBJ databases">
            <title>Proteinase inhibitor in Phaseolus.</title>
            <authorList>
                <person name="Piergiovanni A.R."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="7">Leaf</tissue>
        </source>
    </reference>
    <reference evidence="8" key="3">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="4">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="AM410092">
        <property type="protein sequence ID" value="CAL68581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="A0JJX6"/>
    <dbReference type="SMR" id="A0JJX6"/>
    <dbReference type="STRING" id="3885.A0JJX6"/>
    <dbReference type="Gramene" id="ESW09810">
        <property type="protein sequence ID" value="ESW09810"/>
        <property type="gene ID" value="PHAVU_009G158000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S7BC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MRKSNCQ"/>
    <dbReference type="OrthoDB" id="1063609at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031640">
        <property type="term" value="P:killing of cells of another organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00107">
        <property type="entry name" value="Knot1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.10">
        <property type="entry name" value="Knottin, scorpion toxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008176">
        <property type="entry name" value="Defensin_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003614">
        <property type="entry name" value="Knottins"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036574">
        <property type="entry name" value="Scorpion_toxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33147">
        <property type="entry name" value="DEFENSIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33147:SF133">
        <property type="entry name" value="DEFENSIN-LIKE PROTEIN 6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00304">
        <property type="entry name" value="Gamma-thionin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00288">
        <property type="entry name" value="PUROTHIONIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00505">
        <property type="entry name" value="Knot1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57095">
        <property type="entry name" value="Scorpion toxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00940">
        <property type="entry name" value="GAMMA_THIONIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="4" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0295">Fungicide</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007632931" evidence="5">
        <location>
            <begin position="27"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="Knottins-like" evidence="6">
        <location>
            <begin position="28"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CAL68581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW09810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="73" mass="8117" checksum="0B6C43B3D3D14A1F" modified="2006-12-12" version="1">MRKSCAFFFLLLVLLFASQVVVQTEARVCESQSHGFKGACTGDHNCALVCRNEGFSGGNCRGFRRRCFCTKIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7ADV3</accession>
    <name>V7ADV3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G037300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ADV3"/>
    <dbReference type="STRING" id="3885.V7ADV3"/>
    <dbReference type="Gramene" id="ESW03727">
        <property type="protein sequence ID" value="ESW03727"/>
        <property type="gene ID" value="PHAVU_011G037300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPRIMHT"/>
    <dbReference type="OrthoDB" id="625231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31929">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="92" mass="10200" checksum="AF0D0AD692611DC7" modified="2014-02-19" version="1">MGFGLAGMRKTALSAIQASSKAMDVPKGYLPVYVGEKMKRFFIPVSYLNQPSFQDLLSQAEEEFGYNHPMGGLTIPCREDVFLDTTSSLNRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFL1</accession>
    <name>V7AFL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Small ribosomal subunit protein uS3c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">30S ribosomal protein S3, chloroplastic</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G085700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFL1"/>
    <dbReference type="STRING" id="3885.V7AFL1"/>
    <dbReference type="Gramene" id="ESW04324">
        <property type="protein sequence ID" value="ESW04324"/>
        <property type="gene ID" value="PHAVU_011G085700g"/>
    </dbReference>
    <dbReference type="OMA" id="VCIICTE"/>
    <dbReference type="OrthoDB" id="1337267at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1140.32:FF:000003">
        <property type="entry name" value="30S ribosomal protein S3, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="entry name" value="Ribosomal protein S3, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057258">
        <property type="entry name" value="Ribosomal_uS3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005704">
        <property type="entry name" value="Ribosomal_uS3_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_uS3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018280">
        <property type="entry name" value="Ribosomal_uS3_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01009">
        <property type="entry name" value="rpsC_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760">
        <property type="entry name" value="30S/40S RIBOSOMAL PROTEIN S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760:SF19">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN US3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="Prokaryotic type KH domain (KH-domain type II)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="Ribosomal protein S3 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00548">
        <property type="entry name" value="RIBOSOMAL_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Small ribosomal subunit protein uS3 C-terminal" evidence="10">
        <location>
            <begin position="85"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00035473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="170" mass="19559" checksum="E0CFE4199BB927AF" modified="2014-02-19" version="1">MWTPNSYYLGVEGIGEIKIQKRIDLIQVIIYMGFPKLLIEGKPHKIEEFQTNMHKKLNCVNKKLNIAIVKITNAYKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIEYCCYTVRTIYGILGIKVWIFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGT0</accession>
    <name>V7AGT0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G064400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGT0"/>
    <dbReference type="SMR" id="V7AGT0"/>
    <dbReference type="STRING" id="3885.V7AGT0"/>
    <dbReference type="Gramene" id="ESW04063">
        <property type="protein sequence ID" value="ESW04063"/>
        <property type="gene ID" value="PHAVU_011G064400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVJF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GCKICEF"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16655">
        <property type="entry name" value="RING-Ubox_WDSUB1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01989">
        <property type="entry name" value="USP_STK_Ubox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051348">
        <property type="entry name" value="U-box_ubiquitin_ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647">
        <property type="entry name" value="OS02G0152300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647:SF43">
        <property type="entry name" value="OS10G0100500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="456"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="domain" description="U-box" evidence="8">
        <location>
            <begin position="729"/>
            <end position="800"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW04063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="800" mass="90166" checksum="7299D83F00E4E8D2" modified="2014-02-19" version="1">MPSNALHFSTQPPHLMAMDDYECDEKVHVAVGKSLKKDTTLIQWCFTHFSSAHICLLHVYRPSTMIPTLLGKLPASQASPEVVSAYRIEEREDSKRLMEKYLSLCRAAKVKVTSIIGEADQVQKGIVDLVTVHNIRKLVIGAITPENCMKLKRNSSKANFAVKNVPPFCEIWFVYKGKHIWTREASETPCFVSSHAQPETTTAESLSCRSFQYGTNELFHSECLQSNSTRTTRSTVPNEIIEAEATFSSKSSSCNSYCSPQHSASPHIDTHSEPEEEKIDSQLIEAKAEANAATDKALVELFKCKRLEFKAIEAINKVDFFESAHAHEVKLRKEVGDAMSATIQEQRMFLEEKEEISRELERTTRSISLLENCVHEINSKLDEATHELSLIQASSSNLQHEKQEIRRQKMEALHWLERWKSCGHVGADHCIIGFSEEFPELAEFSLSDLQNATCNFSESFKAMEGGYGSIYKGEMLGRTVAIRKLHSHNMQGSAEFHQEVRVLGSIQHPNLVTLLGVCPEAWSFVYEYYPNGSLQDYLSRKGSLLPLTWTIRVRWISEIARALCFLHSSRPETIIHGGLTLETVLLDTGLSCKICDFGFSRLVKEESLSLPCFHLSTEPKGSFSYIDPELQRTGVLTPKSDVYSFGLIILQLLTGRTPVGLAGEVRRAISCGKLSSILDSSAGEWNSTGATRLAELGLQCCQLNSRDRPELTPSLVRELKQLYVSEERPVPPFFLCPIFQEIMHDPQVAADGFTYERKAIREWLEYGHETSPMTNLKLSYLHLTHNNALRFAIQDWLCKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHP6</accession>
    <name>V7AHP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glycosyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G151200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHP6"/>
    <dbReference type="SMR" id="V7AHP6"/>
    <dbReference type="STRING" id="3885.V7AHP6"/>
    <dbReference type="Gramene" id="ESW05089">
        <property type="protein sequence ID" value="ESW05089"/>
        <property type="gene ID" value="PHAVU_011G151200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCNTSRA"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000056">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48047:SF118">
        <property type="entry name" value="HEXOSYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW05089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="466" mass="51480" checksum="0B11F8C3CBB1BF43" modified="2014-02-19" version="1">MSTARSHVLAYPFPTSGHLIPLLDFSKALVSRGVQVTILVTPKNHPLVPTNFSPLLQTLLLPQIQFSNPNLNRLVNTITFMRHHHHPLIVDWAQAQPIPPSAVISDFFLGWTLLLARDLNVPRLVFSPSGAAAFSLSQSLWRDAPLNDNPQDPNSAVSFPYLPNSPVYPWWQITHLFTGSQRGGPEWEFYRENTLFNIDSWGVVLNTFTELEQVHIEHVKKDLGHKRVWVVGPVLPIQSGSAIPEEHGGNSAVSRNDIVEWLDSCGECSVVYVCFGSRTILTSSQMEVLTRALELSGVNFVLSVGVPDARAVAQEQGKVPCGFMDRVGVKGRGFLIEGWAPQLVILSHRAVGVFLTHCGWNSVLEGLVSGVVMVTWPMGADQYTNARLLVDELGMGIRGAEGEKLPEARELGERIEKALGRTKERVRAEELRDAALRAVGNGGSSERELDEMVKLLNEVPFEKTTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ25</accession>
    <name>V7AJ25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G189700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ25"/>
    <dbReference type="Gramene" id="ESW05559">
        <property type="protein sequence ID" value="ESW05559"/>
        <property type="gene ID" value="PHAVU_011G189700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2615">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICRPEHE"/>
    <dbReference type="OrthoDB" id="10262656at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009705">
        <property type="term" value="C:plant-type vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022821">
        <property type="term" value="F:solute:potassium antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090333">
        <property type="term" value="P:regulation of stomatal closure"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd17330">
        <property type="entry name" value="MFS_SLC46_TetA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000301">
        <property type="entry name" value="Protein ZINC INDUCED FACILITATOR-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001958">
        <property type="entry name" value="Tet-R_TetA/multi-R_MdtG-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23504">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23504:SF90">
        <property type="entry name" value="MAJOR FACILITATOR SUPERFAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01035">
        <property type="entry name" value="TCRTETA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="213"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="376"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="415"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="453"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="8">
        <location>
            <begin position="42"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="54067" checksum="7BE50B72A1CA004A" modified="2014-02-19" version="1">MKEENVNQPLLEKKKKYYENCPGCKVDKANELNEGQGVPFTKLLIVWMLVLCAALPISSLFPFLYFMVRDFNIAKTEADISSYAGYVGSAFMLGRCLTSLFWGTVADRIGRKPVITIGIMSVVIFNTLFGLSTSFWMAVIVRFLLGSLNCLLGPVRAYASELFREEHQTLGLSTVSAAWGIGLIVGPALGGYLSQPVEKYPHIFPKDSFWDKFPYFLPNFVISALAFVVAIGCIWIPETLHNHNYSDESMEDAKALENGNNGADKENIQKNENLFLNWPLMSSIIAYCIFSLHDITYLEVFSLWAVSPQRFGGLNFTTDNVGNVLSISGLALIIYQLTIYPSVEKASGPISLARISSILSIPLLQSYPFITLFSGLALYVVLSILSILKNIFSITIITGLLLLQNRAVEQHQRGAANGIVMTGMSLFNAIGPVTGGAVLTWSQKRMDASFLPGTHMVFFVLNIVEALGLLMMFKPFLVEKKKMHTDHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJQ0</accession>
    <name>V7AJQ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Arabinogalactan peptide 23-like</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G150600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJQ0"/>
    <dbReference type="Gramene" id="ESW05083">
        <property type="protein sequence ID" value="ESW05083"/>
        <property type="gene ID" value="PHAVU_011G150600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S74N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044702">
        <property type="entry name" value="AGP23/40"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34672:SF2">
        <property type="entry name" value="ARABINOGALACTAN PROTEIN 23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34672">
        <property type="entry name" value="POLLEN-SPECIFIC ARABINOGALACTA PROTEIN BAN102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755650" description="Arabinogalactan peptide 23-like" evidence="2">
        <location>
            <begin position="24"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="60" mass="5803" checksum="61CE8FEE7DC930EE" modified="2014-02-19" version="1">MDMRKVTCAILIAAASVSATVAAAEVPAPAPGPSSGASAAFPLVGSLVGASVLSFFALFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJQ7</accession>
    <name>V7AJQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G208900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJQ7"/>
    <dbReference type="SMR" id="V7AJQ7"/>
    <dbReference type="Gramene" id="ESW05779">
        <property type="protein sequence ID" value="ESW05779"/>
        <property type="gene ID" value="PHAVU_011G208900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHAANFP"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05476">
        <property type="entry name" value="pepsin_A_like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000050">
        <property type="entry name" value="Aspartic proteinase CDR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000016">
        <property type="entry name" value="Probable aspartic protease At2g35615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034161">
        <property type="entry name" value="Pepsin-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051708">
        <property type="entry name" value="Plant_Aspart_Prot_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967:SF66">
        <property type="entry name" value="ASPARTIC PROTEINASE CDR1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47967">
        <property type="entry name" value="OS07G0603500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753802" description="Peptidase A1 domain-containing protein" evidence="9">
        <location>
            <begin position="23"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="10">
        <location>
            <begin position="83"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW05779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="46309" checksum="AF717240726A8FFA" modified="2014-02-19" version="1">MSHSSTLVLILLSLCSITFSEALKGGFSVEIIHRDSSKSPLHRPTETQFQRVANAVRRSMNRPHHFNRSSSPKLNVTLNDGEYLISYSVGTPPFKVYGIADTGSDMIWLQCKPCEICYNQTTPIFDPSKSKTYKTLRSSSSACKSVQDASKEGEKCEYTIHYGDGSQSHGDLSVETLTLDSTNGSSIRYPRTVIGCGRKNSVSFEGKGSGVVGLGRGPVSFISQLGSSIGGKFSYCFAPMANTSSKLNFGDAAVVSGKGSVSTPIVSLEPMVFYYLTLEAFSVGKTRIKFRNFSSGSNGEGNIIIDSGTTLTLLPGDVYKKLESAVAREIELDRVEDPFKQLSLCYKGKFDEVHAPVITAHFRGDADVKLNAVNTFVEVDEGVVCLAFMASEIGSIFGNLAQINFLVGYDLEKKRVSFKPTDCTNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKM8</accession>
    <name>V7AKM8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Essential protein Yae1 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G177800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LTO1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKM8"/>
    <dbReference type="STRING" id="3885.V7AKM8"/>
    <dbReference type="Gramene" id="ESW05423">
        <property type="protein sequence ID" value="ESW05423"/>
        <property type="gene ID" value="PHAVU_011G177800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4595">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FKQVCSM"/>
    <dbReference type="OrthoDB" id="48036at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019191">
        <property type="entry name" value="Essential_protein_Yae1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052436">
        <property type="entry name" value="LTO1_adapter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28532">
        <property type="entry name" value="GEO13458P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28532:SF1">
        <property type="entry name" value="ORAL CANCER OVEREXPRESSED 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09811">
        <property type="entry name" value="Yae1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Essential protein Yae1 N-terminal" evidence="2">
        <location>
            <begin position="19"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00038090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="138" mass="15635" checksum="71BC0D5DE1B1F91E" modified="2014-02-19" version="1">MDDLFDSSLNLEDTHYKEGYDEGHSHGLVAGKEEARQVGLKVGFEIGEELGFYRGCVDIWTSAVRLDPTCFSSRAKTIVGQMEELIEKYPLMDPENVQVQEIMDSLRVKFKMVCSSLHVKLEYSGYPKSSTEANDIQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKY3</accession>
    <name>V7AKY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptidase M48 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G124600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase M48 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKY3"/>
    <dbReference type="SMR" id="V7AKY3"/>
    <dbReference type="STRING" id="3885.V7AKY3"/>
    <dbReference type="Gramene" id="ESW04781">
        <property type="protein sequence ID" value="ESW04781"/>
        <property type="gene ID" value="PHAVU_011G124600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2661">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INWSRED"/>
    <dbReference type="OrthoDB" id="7464992at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd07331">
        <property type="entry name" value="M48C_Oma1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2010.10">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051156">
        <property type="entry name" value="Mito/Outer_Membr_Metalloprot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22726">
        <property type="entry name" value="METALLOENDOPEPTIDASE OMA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22726:SF1">
        <property type="entry name" value="METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M48" evidence="8">
        <location>
            <begin position="254"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW04781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="49744" checksum="EBA4DF3A406A947E" modified="2014-02-19" version="1">MGWYRRGALDHFRILASRFMPQNPTFRHSFSCQSWYFDSGSKGASVNGFSSWCSIPQRLGTQGVVGINGNFHNLFPLGAKRFYYIDPYNVEHFKPRGLRHWFKNSRHVFVVMVGSGVLITVYFGNLEMVPYTKRTHLILLSKAMERRLGENEFEQMKATFKGKILPPIHPESVRVTMIAKEIIDALQRGLRKDKMLNDLGYTSEHTVLVEGDGRETLNALVGSEEKVERSWHEGGKILDEKKSWKNDQERGSTATTSHLDGLNWEILVVNEPVVNAFCLPGGKIVVFSGLFEHFKSDAEIATIIGHEVGHAVARHSAEGITKNLWFAILQLILYHLVIPDIVNILSSLFLHLPFSRRMEIEADYIGLLLIASAGYDPRVAPRVYEKLEKIAGGSTLMDYLSTHPSGIQRAELLAQAKIMEEAFSIYRDVREGHRVEAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMX8</accession>
    <name>V7AMX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA helicase</fullName>
            <ecNumber evidence="1">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G1853001g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the DExH box helicase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="1"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMX8"/>
    <dbReference type="STRING" id="3885.V7AMX8"/>
    <dbReference type="Gramene" id="ESW05506">
        <property type="protein sequence ID" value="ESW05506"/>
        <property type="gene ID" value="PHAVU_011G1853001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0920">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KLACKIM"/>
    <dbReference type="OrthoDB" id="5600252at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17917">
        <property type="entry name" value="DEXHc_RHA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000526">
        <property type="entry name" value="DExH-box ATP-dependent RNA helicase DExH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18934:SF103">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="267"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="491"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00060772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW05506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="491" mass="56208" checksum="7C74371842729726" modified="2014-02-19" version="1" fragment="single">MRNSKFAVSLLIARAKSLQLHHHTCHCVASSSSSPTSTSLFRFLPSSIRNAKSVAATRLFSSYYSVEQFSDDEYECDFENQQVSSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSAKATGSLDDVNSANEVKEIDMDENTDSFVDESVMEKVLQKRSLRMRNMQRAWQESPEGRKMLEFRKSLPSFMEKQGLLQAIAHNQVIVISGETGCGKTTQIPQYVLESQIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGVTHIFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYYGGAPTFRIPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQINSLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANI2</accession>
    <name>V7ANI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="7">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G112800g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="7">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the DEAD box helicase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="7"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANI2"/>
    <dbReference type="SMR" id="V7ANI2"/>
    <dbReference type="STRING" id="3885.V7ANI2"/>
    <dbReference type="Gramene" id="ESW07237">
        <property type="protein sequence ID" value="ESW07237"/>
        <property type="gene ID" value="PHAVU_010G112800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0342">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NGEQYVH"/>
    <dbReference type="OrthoDB" id="193716at2759"/>
    <dbReference type="PhylomeDB" id="V7ANI2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17964">
        <property type="entry name" value="DEADc_MSS116"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="11">
        <location>
            <begin position="222"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="253"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="470"/>
            <end position="618"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="91"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="6">
        <location>
            <begin position="222"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="91"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="166"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="212"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="691" mass="77336" checksum="8359924662A550E0" modified="2014-02-19" version="1">MHTKLLTQIRLLHPLLPMKPRTLPLLSRAIFFPPSKFLRTAATFKARAFSARVSAHARDKIPVRPSKSLVDDEAELSDWVDELRTGRVDRFQRLGSDDDEGRETRPPRRNNNRASPNLGKRRGEDLMRGRQNAGARRKFQPRSDDDEEMVESGRKFKGGGVGTFLSEDDSEDENSDGSEEEEILNKSRTALFGKQNGLKPKTVEPTPRPSSPGGSDSYLSESRFDQCSVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKARTGTGKTVAFLLPSIEVVVKSPPSDRDNRRPPIFVLVICPTRELASQAAAEANKLLKYHPAIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHIENTAGFASRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEGSEETHSQVRQTHLVAPLDKHFPLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVSELLGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPTDREQYIHRLGRTGRRGKEGQGILLLAPWEEFFLSTIKDLPIEQVPVVPSVDPDTKRKVEKALSHVDMKNKEAAYQAWLGYYNSNKKVGRDKHRLVELANEFSRSMGLDNPPAVAKIVLGKMGLRNIPGLRSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7APE5</accession>
    <name>V7APE5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G131400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APE5"/>
    <dbReference type="SMR" id="V7APE5"/>
    <dbReference type="STRING" id="3885.V7APE5"/>
    <dbReference type="Gramene" id="ESW07454">
        <property type="protein sequence ID" value="ESW07454"/>
        <property type="gene ID" value="PHAVU_010G131400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWKN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="608866at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47122">
        <property type="entry name" value="MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47122:SF4">
        <property type="entry name" value="TRF-LIKE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH myb-type" evidence="5">
        <location>
            <begin position="536"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="4">
        <location>
            <begin position="544"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="161"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="365"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="162"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="365"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="382"/>
            <end position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="658" mass="72986" checksum="547F96167A08104D" modified="2014-02-19" version="1">METVVGIEDNDDGKFEDSGLDRSSSALSSPKQISNPIVYKLVRVEGDGRLVPATDDEVMEVGDFLEYENSEMHVVADTGQSLECISIERSSSGKLRLECSEGSAEADLGKLNAKLQYIEQILQKVKEEEKQRISCGSPVHSHVNVDSQCSADKCPVMDGKVQSETPYQDNPSIASSLNYTHSNQSGSMDQCSRPSEGVIESGSSASAIHSNLKPDLSMSDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATNFIIKDNQIVRKFVEESSGNMNISSLISSENMTEEEDINLKDSSAVNACGIDDNQVISEIRLRNQNTEYGLEDENNETEQRAAKRIRRPTKRYIEELSENESREQNPRLPISNKSMGLGQVSSTSYVRPGRNTFSEVRTYGMRFDSLGGSDVQIPCVSLIRRSRPRKDMASLMKFHPTATSETAKLSNKLIEHSSDAVGEIPDKVFKPRMPAKFHQSPSSEPEKEKQCPVVGTIEPWQELRPKRADLPGHTSDDNIVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAMTPAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNISSNKVAAGAGSVHEGRSGYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7APY5</accession>
    <name>V7APY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G034200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APY5"/>
    <dbReference type="STRING" id="3885.V7APY5"/>
    <dbReference type="Gramene" id="ESW06276">
        <property type="protein sequence ID" value="ESW06276"/>
        <property type="gene ID" value="PHAVU_010G034200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EITTMDK"/>
    <dbReference type="OrthoDB" id="688249at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044577">
        <property type="entry name" value="HIPP4/7/8/17/18/19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46195:SF12">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46195">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="3" id="KW-0636">Prenylation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="5">
        <location>
            <begin position="14"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW06276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="114" mass="13017" checksum="0A15D596745878C9" modified="2014-02-19" version="1">MAKEEKKKEEELEVITAIYKVNLHCKECGSKIKKHLMITQGVQSVEIEIEKGEVRAKGKIEPLKILKLIEKKSKKKVELISPKVKPKEITTMDKKPKEIKDCDDFGTAAHKHPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7APY6</accession>
    <name>V7APY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G125500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM208 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APY6"/>
    <dbReference type="STRING" id="3885.V7APY6"/>
    <dbReference type="Gramene" id="ESW07385">
        <property type="protein sequence ID" value="ESW07385"/>
        <property type="gene ID" value="PHAVU_010G125500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3269">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRPKYDA"/>
    <dbReference type="OrthoDB" id="276296at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006624">
        <property type="term" value="P:vacuolar protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008506">
        <property type="entry name" value="SND2/TMEM208"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13505">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13505:SF7">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05620">
        <property type="entry name" value="TMEM208_SND2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="142"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="148"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="163"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="173" mass="19898" checksum="6AD550055995C609" modified="2014-02-19" version="1">MANQGAKKRKEENARHMARLRQVIIACNVIYVLLRMLVFHSSFTWKHWIGLILTSLAYVIPYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIISGKFWFTYLMIPAFGAYKSFGFIKGFLPQGSEESFEDEKTRKKREKMEKKASRPKFVKTRTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQ82</accession>
    <name>V7AQ82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G042700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQ82"/>
    <dbReference type="SMR" id="V7AQ82"/>
    <dbReference type="STRING" id="3885.V7AQ82"/>
    <dbReference type="Gramene" id="ESW06371">
        <property type="protein sequence ID" value="ESW06371"/>
        <property type="gene ID" value="PHAVU_010G042700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GASCNDY"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052610">
        <property type="entry name" value="bHLH_transcription_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959:SF2">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="186"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="225"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="167"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW06371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="369" mass="41604" checksum="AC5EE669581D611E" modified="2014-02-19" version="1">MEEDSWESWISSLEMGDEDNFIGHSHIKSLDEDKFVLEPLNFSFHNSSTNNNDNDNNSKKVFSMGSSCLSYEEDASFDERHGKMLKSNSSSSIISQDVVAYKNAASSSSSSSAPSSSSSFILSFENSTMKPSSLHHRPNDDDDHGDLHRYFGGDALCSSVLSSESEHVITKPKAKQGDNKKYRSSSEIQDHIMTERRRRQELTERFIALSATIPGLKKTDKAYILREAMIYMKQLEERVIELENENKRKNTDSRILIKKYSQVCSREEEGTSCDETKSHNISTPPLPQVEARVLEKEVLIGIHCHKQKDIVLKIMALLQNHHLSLASSSVLPFGTSTLKVTIIAQMEEKYCMTVNNLVKSLKQALLKIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7ART5</accession>
    <name>V7ART5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G033600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ART5"/>
    <dbReference type="SMR" id="V7ART5"/>
    <dbReference type="STRING" id="3885.V7ART5"/>
    <dbReference type="Gramene" id="ESW08278">
        <property type="protein sequence ID" value="ESW08278"/>
        <property type="gene ID" value="PHAVU_009G033600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW08279">
        <property type="protein sequence ID" value="ESW08279"/>
        <property type="gene ID" value="PHAVU_009G033600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0110">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0118">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKMFMGR"/>
    <dbReference type="OrthoDB" id="272703at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901259">
        <property type="term" value="P:chloroplast rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00590">
        <property type="entry name" value="RRM_SF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050502">
        <property type="entry name" value="Euk_RNA-bind_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000504">
        <property type="entry name" value="RRM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48025:SF17">
        <property type="entry name" value="28 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48025">
        <property type="entry name" value="OS02G0815200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00076">
        <property type="entry name" value="RRM_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00360">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50102">
        <property type="entry name" value="RRM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="80"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="RRM" evidence="4">
        <location>
            <begin position="174"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="250"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="250"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW08279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="306" mass="34023" checksum="1C357AD283C37D56" modified="2014-02-19" version="1">MALLRVVCLTSANHLSPQTSSHSISFSSISQSINFPNHSSFRLPRLSLSTTKQTSNFTLTCVSTSEQQAQPVTEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNRGLAFVEMGSPEEALEALNKLESYEFEGRVMRVNYARPKKKKTPPPVKPSSGVTFNLFVANLSYEAKSTDLKEFFDSGTGKVVRAEVVFHESPRKPSGYGFVSFKSKKEAEAALSEFQGKDFMGRSIRVDRGRRFVQKPGDRNPKSVDTPSELSVNGAEAQQPAEETPNSEDTPELSVNGTEADKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AST8</accession>
    <name>V7AST8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G116600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AAA ATPase family. BCS1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AST8"/>
    <dbReference type="SMR" id="V7AST8"/>
    <dbReference type="STRING" id="3885.V7AST8"/>
    <dbReference type="Gramene" id="ESW07281">
        <property type="protein sequence ID" value="ESW07281"/>
        <property type="gene ID" value="PHAVU_010G116600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0743">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAQKTHG"/>
    <dbReference type="OrthoDB" id="10251412at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025753">
        <property type="entry name" value="AAA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058017">
        <property type="entry name" value="At3g28540-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050747">
        <property type="entry name" value="Mitochondrial_chaperone_BCS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23070">
        <property type="entry name" value="BCS1 AAA-TYPE ATPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14363">
        <property type="entry name" value="AAA_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25568">
        <property type="entry name" value="AAA_lid_At3g28540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="AAA+ ATPase" evidence="7">
        <location>
            <begin position="227"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00049360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="477" mass="54920" checksum="20FCB8098EF7B32B" modified="2014-02-19" version="1">MSVYSTVLLVILSLVVGFVIRRLLFKTGLIHSIRKLLRRVQDWFHVYQFLKVPEFNEAMQRNHLHRKVSLYLHSLPSIEDADFTNLVSGYDQNDIVLRLEPNQTIQDNFLGATLFWFEQKTEPERISSFVLKIRKTDKRRILRQYLRHINTVADEMENQRKRHLRLFMNAAATEGGTGETRWRSVPFTHPATFETIVMEKDLKNKIKSDMESFLKAKQYYRKLGRAWKRSFLLYGSSGTGKSSFVAAMANFLRYDVYDVDLSKIRGDSDLKFLLMETTAKSVVVVEDLDRFLVPEKESAVTERGIQSFMDGILSACCGEERVMVFTMNSKEFVNPNLMRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAQVENIFRHGGSLSPAEISELMIANRNSPSRAIKSVIGALQSDGDGRKYADKIERHLGVDDVDEPSFGGDELSTVKDLRKFYSFFKKRNARRVSYPKVQHLGPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT25</accession>
    <name>V7AT25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">glucan endo-1,3-beta-D-glucosidase</fullName>
            <ecNumber evidence="3">3.2.1.39</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">(1-&gt;3)-beta-glucan endohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Beta-1,3-endoglucanase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G155800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of (1-&gt;3)-beta-D-glucosidic linkages in (1-&gt;3)-beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.39"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the glycosyl hydrolase 17 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.39" evidence="3"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT25"/>
    <dbReference type="SMR" id="V7AT25"/>
    <dbReference type="STRING" id="3885.V7AT25"/>
    <dbReference type="Gramene" id="ESW07748">
        <property type="protein sequence ID" value="ESW07748"/>
        <property type="gene ID" value="PHAVU_010G155800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWF6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MVMRAYV"/>
    <dbReference type="OrthoDB" id="666604at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042973">
        <property type="term" value="F:glucan endo-1,3-beta-D-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000005">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000490">
        <property type="entry name" value="Glyco_hydro_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044965">
        <property type="entry name" value="Glyco_hydro_17_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32227">
        <property type="entry name" value="GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00332">
        <property type="entry name" value="Glyco_hydro_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753721" description="glucan endo-1,3-beta-D-glucosidase" evidence="10">
        <location>
            <begin position="25"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW07748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="388" mass="42864" checksum="F85F6A1F78717EE7" modified="2014-02-19" version="1">MFSYSTSFFLSLLFFSVTLSHVVGDKIFTGTYGVNYGRIADNLPSPESVVTLLKASKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQQFLPGTRIRGIAVGNEILGGGDMGLWQVLLPAAKNVYTALSRLNLAHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNAGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFEKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSATSTFLSFKGIGSLCFMVSTSCAAFLLLVAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUM4</accession>
    <name>V7AUM4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GATA transcription factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G003800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the type IV zinc-finger family. Class A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUM4"/>
    <dbReference type="SMR" id="V7AUM4"/>
    <dbReference type="STRING" id="3885.V7AUM4"/>
    <dbReference type="Gramene" id="ESW07921">
        <property type="protein sequence ID" value="ESW07921"/>
        <property type="gene ID" value="PHAVU_009G003800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KTPRFPC"/>
    <dbReference type="OrthoDB" id="2162994at2759"/>
    <dbReference type="PhylomeDB" id="V7AUM4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00202">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.50.10:FF:000018">
        <property type="entry name" value="GATA transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.50.10">
        <property type="entry name" value="Erythroid Transcription Factor GATA-1, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051140">
        <property type="entry name" value="GATA_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016679">
        <property type="entry name" value="TF_GATA_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000679">
        <property type="entry name" value="Znf_GATA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013088">
        <property type="entry name" value="Znf_NHR/GATA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658:SF41">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00320">
        <property type="entry name" value="GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016992">
        <property type="entry name" value="TF_GATA_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00401">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00344">
        <property type="entry name" value="GATA_ZN_FINGER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50114">
        <property type="entry name" value="GATA_ZN_FINGER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0010">Activator</keyword>
    <keyword evidence="7 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 11" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="GATA-type" evidence="14">
        <location>
            <begin position="211"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="181"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="181"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR016992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW07921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="33031" checksum="3CF56EEE5C76D7F9" modified="2014-02-19" version="1">MEVAVAKALKPSLMGEFIVQQTNCEDFFCLNANTVVGGDDFFVDDLFDFSDGSLHYEQQDCVEEKKSLSASSQSKDQGEDDSNSNSTGASYDSLFSAELAVPAGDLEDLEWVSHFVDDSLPELSLLYPVRSEEVNRRVEPEPSAKKTPRFPCEMKITTKARTVRNRKPNARVWSLGPLLSLPSSPSSCSSSVTEPPAKKQKKRAEAQPVGAQVQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFSEYRPACSPTFCSDIHSNSHRKVLEIRKKKEVAGPDTGSAQAQMVPTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUT1</accession>
    <name>V7AUT1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G125000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUT1"/>
    <dbReference type="STRING" id="3885.V7AUT1"/>
    <dbReference type="Gramene" id="ESW09406">
        <property type="protein sequence ID" value="ESW09406"/>
        <property type="gene ID" value="PHAVU_009G125000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW09407">
        <property type="protein sequence ID" value="ESW09407"/>
        <property type="gene ID" value="PHAVU_009G125000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZYC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IECAPFF"/>
    <dbReference type="OrthoDB" id="1907500at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045282">
        <property type="entry name" value="At4g08330-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33674:SF9">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33674">
        <property type="entry name" value="METHIONINE-S-OXIDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24046">
        <property type="entry name" value="At4g08330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW09407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="165" mass="18443" checksum="DD9A62B4277B6DD8" modified="2014-02-19" version="1">MENSVFNKRSQVHQNPTSSSYTYSCYSQRDVQYSCGTCGYDLNLSSSNRSISSIGSKYGKSIKRGIISFLNVDDSRFTRAEEIECAPFFSKHSWGLFRPKTKLLCRKCCNHVGYSYNHHTSLSSPLVSNGTKPSPATQASSPIKYDIRIRALQPSSQEYGITVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWC6</accession>
    <name>V7AWC6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">1-phosphatidylinositol 4-kinase</fullName>
            <ecNumber evidence="2">2.7.1.67</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G052900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.67" evidence="2"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWC6"/>
    <dbReference type="SMR" id="V7AWC6"/>
    <dbReference type="STRING" id="3885.V7AWC6"/>
    <dbReference type="Gramene" id="ESW08526">
        <property type="protein sequence ID" value="ESW08526"/>
        <property type="gene ID" value="PHAVU_009G052900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0001">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2381">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEVSREC"/>
    <dbReference type="OrthoDB" id="5839at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004430">
        <property type="term" value="F:1-phosphatidylinositol 4-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17039">
        <property type="entry name" value="Ubl_ubiquitin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000307">
        <property type="entry name" value="Phosphatidylinositol 4-kinase gamma 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044571">
        <property type="entry name" value="P4KG1-8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000403">
        <property type="entry name" value="PI3/4_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45800">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 4-KINASE GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45800:SF4">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00454">
        <property type="entry name" value="PI3_PI4_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50290">
        <property type="entry name" value="PI3_4_KINASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="8">
        <location>
            <begin position="30"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="8">
        <location>
            <begin position="108"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="PI3K/PI4K catalytic" evidence="9">
        <location>
            <begin position="267"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="583" mass="64558" checksum="353DFB11CE80AC74" modified="2014-02-19" version="1">MACVALRPLPEESFNTGSEFTGCFNSLLRDSILIYLTVGGSVIPMRIMETDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNRSCIRDYGVGDGNVLHLVLRLSDLKAITVKTVCGKEFGLYVEKSRSVGYVKQQIAKKGQGLVDLKDQELTCEGEALEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDFELSIEASYSHNLVSNLHADQLASVSVTNEIREKNRLSRNSLVEPIIMSSNNKISPVIHNIIKITSEGLENGCKPIQSPEGSGGAYLMQDSSGLKYISVFKPIDEEPMAINNPRGLPISQDGEGLKKGTRVGQGALREVAAYILDHPRKGPRSYHSNEEPGFAGVPPTVMVKCLHKGFHNVEGYQNLSKVGSLQMFMRNIGSCEDVGPSAFPVEEVHKITVLDIRLVNADRHAGNILIAKDGEDGATILIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSADTIDYIKSLDAEEDIKLLKFHGWDLPPKCALILRISTMLLQKGAERGLTPFAIGSIMCRETLKKKSVIEQIVQEAEEAAFPGASEAAFLDLVSVIMDSHLNELFPFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYL2</accession>
    <name>V7AYL2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G232800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYL2"/>
    <dbReference type="STRING" id="3885.V7AYL2"/>
    <dbReference type="Gramene" id="ESW10727">
        <property type="protein sequence ID" value="ESW10727"/>
        <property type="gene ID" value="PHAVU_009G232800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ0K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMSTIEW"/>
    <dbReference type="OrthoDB" id="1939272at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36810">
        <property type="entry name" value="BNACNNG47150D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36810:SF1">
        <property type="entry name" value="OS05G0232200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="117"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="296"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="145"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="171"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="204"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="225"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="317"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="362"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="433" mass="48132" checksum="D2142E841B6F7AE5" modified="2014-02-19" version="1">MPGTIMVSVLEFMDLPLSSTTSIRASLGRIEYQVNDKENLSFPLTSIRDDLIFKIQDAEGNEISRTGIQIKLILEKGVLEDKFPLGGGHLRLKLQFILSDEERDRIRSLRQSALKKKHDELLSSGRRGAESNSRAVLGNAALPFRRNDEVSESPKKNLQQEAVSRLQDLAGSREEKESDTRNVAGTQLDQKQLKPNIADEYKKSSSTKPVSETVTFTQSQHKGKKPADQSPSEKHPQRAIGSDKIAILVGSEKNDAPASNLIQPNQEEGGLQYSEKRASLGKIPSNVRKMISAFEGGPAQDTRSQIKPPPTKQQESSNERRDSSKTQHLERDKSKKTEPADLNERVKSASLKEAHVGTGSEGSKHEKIVEIKESEPKTSDNNGDENSRGPFNQVVKVAIIIGFGLLVLLTRKRRKSNGERQRDDVFNFLNLPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B109</accession>
    <name>V7B109_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">TATA box binding protein associated factor (TAF) histone-like fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G012100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TAF6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B109"/>
    <dbReference type="SMR" id="V7B109"/>
    <dbReference type="STRING" id="3885.V7B109"/>
    <dbReference type="Gramene" id="ESW11220">
        <property type="protein sequence ID" value="ESW11220"/>
        <property type="gene ID" value="PHAVU_008G012100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2549">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DTSIVCH"/>
    <dbReference type="OrthoDB" id="361039at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000124">
        <property type="term" value="C:SAGA complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046695">
        <property type="term" value="C:SLIK (SAGA-like) complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005669">
        <property type="term" value="C:transcription factor TFIID complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016251">
        <property type="term" value="F:RNA polymerase II general transcription initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009860">
        <property type="term" value="P:pollen tube growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051123">
        <property type="term" value="P:RNA polymerase II preinitiation complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22931">
        <property type="entry name" value="HFD_TAF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08050">
        <property type="entry name" value="TAF6C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000046">
        <property type="entry name" value="transcription initiation factor TFIID subunit 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.770:FF:000004">
        <property type="entry name" value="transcription initiation factor TFIID subunit 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.770">
        <property type="entry name" value="TAF6, C-terminal HEAT repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037796">
        <property type="entry name" value="TAF6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011442">
        <property type="entry name" value="TAF6_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046344">
        <property type="entry name" value="TAF6_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004823">
        <property type="entry name" value="TAF_TATA-bd_Histone-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10221">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10221:SF13">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02969">
        <property type="entry name" value="TAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07571">
        <property type="entry name" value="TAF6_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00803">
        <property type="entry name" value="TAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TATA box binding protein associated factor (TAF) histone-like fold" evidence="8">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="417"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="543" mass="60470" checksum="797386727D8A3F6B" modified="2014-02-19" version="1">MSIVPKETIEVIAQSIGINTLSPDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTILTADDVDVALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEASLPKAPLDTAVTCHWLAIEGVQPAIPENAPVEVISAPSDIKKHEHKDDDLPVDIKLPVKHVLSRELQLYFDKVAELTLSESDSALFKEALVSLSTDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVVSSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGSRLADNHWELRDFTANLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLEIYMRLLDSEMILEKQKNEMKRHEAWRVYGALLRAAGQCIYDRLKMFPTIPTPSLQSVWKTNAKVLTSSSRKRKAGPDQSEQQPPLKKAATDVEDGVVLMNSSPVHKPEETETQASSVDSIIGSSSSAQMKIETSLDGELRSNRDDTQALKTSAALTQVWKDELNSGRILVSLFDLFGEGILSFIQSPEMYMFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1A9</accession>
    <name>V7B1A9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G192300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1A9"/>
    <dbReference type="SMR" id="V7B1A9"/>
    <dbReference type="STRING" id="3885.V7B1A9"/>
    <dbReference type="Gramene" id="ESW10241">
        <property type="protein sequence ID" value="ESW10241"/>
        <property type="gene ID" value="PHAVU_009G192300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1128">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNIRLIC"/>
    <dbReference type="OrthoDB" id="1936594at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044244">
        <property type="entry name" value="TTC27/Emw1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16193:SF0">
        <property type="entry name" value="TETRATRICOPEPTIDE REPEAT PROTEIN 27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13432">
        <property type="entry name" value="TPR_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50293">
        <property type="entry name" value="TPR_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="621"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="373"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW10241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="918" mass="103589" checksum="35936BACBDA179DE" modified="2014-02-19" version="1">MDANVLEAKAEAIRGYELRLIRCTLSHDQPQQLCASQKRDSLDASINHLLNLIQCGNYIQALTSQPSFHLVFRLADHDSPPLNDPGRLYALLVDRAECFIAAAASDVVEQRRRGMLVTCIAIAAFLGFTQSNFTGPLNGAELPRCPLCLDGGDEERDNWARNQLMSAGSELLGKFSNLQYIVFAKMLLMRVKDLGVEMKSLSWWLARVLLVQQRVLDDRSSSLSDLLHVYMGEALQMFGSREQVESYWQDDLHDGESSVILSVLHLEAGIIEYVYGRVDSSRMHFKSAEMAAGLKLSVTGVLGFRTEHQAEPKAQLVLVTNTGPSNNVDENCPLTGTATQTCDSNNGEDNWNLNQHETSEASDVLRIPKLLEKDDDSRTRSLPPQGIENGGHVTPSLTASQQAVILAFCLLIEKSSRHDELQRWDMAPYIEAIDSQNFFYFTTRCLSDILRIRWESSRSRTKERALLMMDNLVKHIYKPSPAIADRIAFSYAVYMPSIPALRKEYGLLLVQCGLIGDAMKEFEELELWYYLIYCYSLLGKKATAVELIRKRLLETPNDPRLWCSLGDITDDDACFEKALEVSNNRSYRAKRSLAQSAYKRGDYKTSQILWESALAMNSMYPDGWFQLGDAALKAQDTEKALDAFTRVIQLDPENGDAWNYIGSLHMMKKKGKEAFIAFKEALKFKRTSWQLWEKYSYVAVEISNISQALEGVQMVLDITNNKRVDSELLERITEQVEKRLLSCNMPPLISDNMPKTDELCIVDTGAEYEMEVRGASVAGRSREAEQLLFLLGKVLQQIVKNGSGFGSEIWGLYAKWHRINGDLMMCSEALLKQVRSLQGCDTWKDQDRFKKFAKSSLDLCHVYVDMFSSASGSSKQLSAAELHLKNAQSCFSDTQEFRDLQACYDEVKIKLQSNSINA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1R6</accession>
    <name>V7B1R6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G2397001g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1R6"/>
    <dbReference type="STRING" id="3885.V7B1R6"/>
    <dbReference type="Gramene" id="ESW10808">
        <property type="protein sequence ID" value="ESW10808"/>
        <property type="gene ID" value="PHAVU_009G2397001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR7E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DKQFMTL"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000590">
        <property type="entry name" value="PR5-like receptor kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000178">
        <property type="entry name" value="serine/threonine-protein kinase PBS1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 13" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="90"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW10808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="40216" checksum="F474585DB7E84EB5" modified="2014-02-19" version="1" fragment="single">MSDDTSSEAGSGTAIAIVVVVVIIVKISIFFWVLPECLKRYRANGGIGSFQQRGTPDKQFMTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSYHLGSGGFGSVYKGSFSNGTIIAVKVLLGSSDKIIDQQFMAEVGTIGKVHHFNLVRLYGFCFERNLRALVYEYMVNGSLEKYLFHESTILSFEKLHEIAIGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDHTHISMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRKNHNINVPESQVWFPMWAWEKFAAGDVGELITCCGIEDKDREIAERIVNVALLCVQHRPEARPIMSVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1V1</accession>
    <name>V7B1V1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Rx N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G067000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1V1"/>
    <dbReference type="SMR" id="V7B1V1"/>
    <dbReference type="Gramene" id="ESW11882">
        <property type="protein sequence ID" value="ESW11882"/>
        <property type="gene ID" value="PHAVU_008G067000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSXD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPGVANW"/>
    <dbReference type="OrthoDB" id="1422090at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186:SF45">
        <property type="entry name" value="DISEASE RESISTANCE RPP13-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47186">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="2">
        <location>
            <begin position="155"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance R13L4/SHOC-2-like LRR" evidence="3">
        <location>
            <begin position="284"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW11882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="570" mass="66704" checksum="CEF40A38A4D17572" modified="2014-02-19" version="1">MSIRTNKMKAVPVLLKQLMIARSKLHERGRDESFDGKLEMLRLDLNKIKDVFVRVKKNEEELLDTLAEVYDHLRKLDYRKLGEDMNGICKRIRDSAHKLLPMDAFDDSYKEEDHKGDQIFHSSHELQQPHQKSWTTEDYHRLDHLSKGCLWSLLIFPENAVIRKSNVINLWIGEGLVEDKNERTAIETGEVLIHDLLLSDVIVRYGSEKDPLVNKFRILPNVRRQLELCEEEFGTISLFRESGINRFVLKQKKLTLGDSDFGYSIHSVFNVGASYLNFRPQWAKEFMNLEVLQLGRWQDSPLHHIEVGSEEFLKELRNLTHLKYLSLRGISRIFNIPSFIAQLERLLILDLKACHNLETLPNDISSMKSLTQLILSECYLLEGMPKGIEKLKNLEVLKGFVISTPGKTPCKISDLVNLEKLKRLSIHIGSEVVIRDWEFESLEHIPTLEHLKISWSGSDPWSGSFRLHFPPNLRKLHLECFPGQSLGEFLFNMRYWEKDMELNITGGKLESMKVDFEWKYVRVLRLKYLKQLNVDIDNFKSFFPRLKYAEIKQVSNHKEYEWIESMNGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2A0</accession>
    <name>V7B2A0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Tyrosinase copper-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G073200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
        <text evidence="7">Binds 2 copper ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the tyrosinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2A0"/>
    <dbReference type="STRING" id="3885.V7B2A0"/>
    <dbReference type="Gramene" id="ESW11954">
        <property type="protein sequence ID" value="ESW11954"/>
        <property type="gene ID" value="PHAVU_008G073200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVBP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHEDMGT"/>
    <dbReference type="OrthoDB" id="6132182at2759"/>
    <dbReference type="PhylomeDB" id="V7B2A0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004097">
        <property type="term" value="F:catechol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046148">
        <property type="term" value="P:pigment biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1280.10">
        <property type="entry name" value="Di-copper center containing domain from catechol oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008922">
        <property type="entry name" value="Di-copper_centre_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013788">
        <property type="entry name" value="Hemocyanin/hexamerin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016213">
        <property type="entry name" value="Polyphenol_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022740">
        <property type="entry name" value="Polyphenol_oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022739">
        <property type="entry name" value="Polyphenol_oxidase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050316">
        <property type="entry name" value="Tyrosinase/Hemocyanin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002227">
        <property type="entry name" value="Tyrosinase_Cu-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11474:SF76">
        <property type="entry name" value="SHKT DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11474">
        <property type="entry name" value="TYROSINASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12142">
        <property type="entry name" value="PPO1_DWL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12143">
        <property type="entry name" value="PPO1_KFDV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00264">
        <property type="entry name" value="Tyrosinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000290">
        <property type="entry name" value="PPO_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00092">
        <property type="entry name" value="TYROSINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48056">
        <property type="entry name" value="Di-copper centre-containing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00210">
        <property type="entry name" value="HEMOCYANIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00498">
        <property type="entry name" value="TYROSINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0186">Copper</keyword>
    <keyword evidence="6 8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0883">Thioether bond</keyword>
    <feature type="domain" description="Tyrosinase copper-binding" evidence="10">
        <location>
            <begin position="353"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>A</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>A</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>A</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="360"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="8">
        <location>
            <begin position="94"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="8">
        <location>
            <begin position="109"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="cross-link" description="2'-(S-cysteinyl)-histidine (Cys-His)" evidence="9">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000290-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000290-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000290-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW11954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="582" mass="66793" checksum="34A5CE76A0D1B202" modified="2014-02-19" version="1">MTTPSKPLPLFFALTIIFLIPFISLLNNHFSVITAIKLICRQTYKPPHAKQNGLVKSSNERDKSRLWREPFIGFKNIDDSSSISRPISPNISDCFPVELPSNAITPAHCCPSKPSFSKILDFKDFASPSTTLRVRKPFHLLDNEDIAKFEKGIALMKALPDDDPRSFIQQAKVHCAYCNGAYHLSHPFQDTKLDIHRSWFFFPFHRWYIYFFERILGNLIGDPNFALPFWSWDSIEGMQMPSYFANPNSSLYHKLRHQKHLPPHVVDLNYASESSYVPSHQQVSYNLATMYRQMVLASTTELFMGGPFRLGDNPRPGPGSVEAAPHNTVHTWVGGAETPNHEDMGTFYTAARDPIFYGHHSNLDRMWAIWKTLGEGRKDYSDEDWLDSEFFFYDENANFVRVKVRDCVDTKSLGYVYQDVDLAWLRTPPTSRKSKLLRQRKKAKVWSSKPRKFPLVLDSVTSVIVKRAKKWRSKEEKEEEEEVLVIEGIEFGSDKFVKFDIHVDDDEDRLSNPDETEFVGSFVSLYHGRGHKISTSFKVGISKVLENLEAEEDDDLLVTLVPKLGKGDVIIGSIKIQFIPKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2I2</accession>
    <name>V7B2I2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G085400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2I2"/>
    <dbReference type="Gramene" id="ESW12112">
        <property type="protein sequence ID" value="ESW12112"/>
        <property type="gene ID" value="PHAVU_008G085400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FIRRIFH"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="PhylomeDB" id="V7B2I2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46225">
        <property type="entry name" value="C3H4 TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46225:SF1">
        <property type="entry name" value="RING_U-BOX SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="163"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="193"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="4">
        <location>
            <begin position="281"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW12112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="327" mass="37099" checksum="B865ED5019A8F36F" modified="2014-02-19" version="1">MASFPSNSASEHSMAGAQNSHPQASSPSFMTRVAMRVSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALVLQITITTLTLAISKSEKPIWPMRVWLAGYDIGCVLNLLLLCGRYYQLHVTQGGGLNLSDLEQQRNNEESSVLRSSHLMDKCRSSLELFFAIWFVMGNVWAFDSRLGSFQQAPKLQVLCMILLGWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASDDQISEIPSWRYKGAHTNLDFANDSQTTQRLINDDPECCICLAKYKDKEEVRQLPCSHLFHLKCVDQWLRIISCCPLCKQGLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4H0</accession>
    <name>V7B4H0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G1166000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4H0"/>
    <dbReference type="STRING" id="3885.V7B4H0"/>
    <dbReference type="Gramene" id="ESW12480">
        <property type="protein sequence ID" value="ESW12480"/>
        <property type="gene ID" value="PHAVU_008G1166000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RASMKHM"/>
    <dbReference type="OrthoDB" id="417891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045000">
        <property type="entry name" value="TR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898:SF6">
        <property type="entry name" value="NADP-DEPENDENT MANNITOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898">
        <property type="entry name" value="TROPINONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="55" mass="5881" checksum="530273EEF6399447" modified="2014-02-19" version="1" fragment="single">EKIGPKEFEANITSKIPFGRIGETNEVSSLVAFLCLPAASYITGQILYVDGGFTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B582</accession>
    <name>V7B582_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_008G165200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GRAS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B582"/>
    <dbReference type="SMR" id="V7B582"/>
    <dbReference type="STRING" id="3885.V7B582"/>
    <dbReference type="Gramene" id="ESW13067">
        <property type="protein sequence ID" value="ESW13067"/>
        <property type="gene ID" value="PHAVU_008G165200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0MM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVGFPMQ"/>
    <dbReference type="OrthoDB" id="646981at2759"/>
    <dbReference type="PhylomeDB" id="V7B582"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005202">
        <property type="entry name" value="TF_GRAS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31636">
        <property type="entry name" value="OSJNBA0084A10.13 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03514">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50985">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Leucine repeat II (LRII)" evidence="5">
        <location>
            <begin position="243"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="SAW" evidence="5">
        <location>
            <begin position="380"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="VHIID" evidence="5">
        <location>
            <begin position="190"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW13067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="455" mass="49761" checksum="444C5969F18E3CFE" modified="2014-02-19" version="1">MDDPDFLDFSNRSITTSASSEEDWTNLWSPVVDWGSLAAGEDNFQTLFDSIVHKDDVVLTPDQTTAQDSDLSGHDEKGLRLVHLLMAAAEALTTGTESHHLARVILVRLNELVSPTHGTNIERLAAHFSSALQNLLDGAGSSHTITNNTPNPTDTLTAFHLLQDMSPYVKFAHFTANQAILEAVAHEKRVHIVDFDVTEGAQWASLMQSLSSRSTGPPGPHLRITALSRGSASGRRSIATVQETGRRLTAFAASVAQPFSFHQCRLDPGETFRPSLLKLIRGEALVFNCMLHLPHLSFRASGSVASFLKGAKELNPRVVLVVEEEVARGGDAGFVGLFMDSVQHYSAVFDSLEVGFPMQKWARALVERVFLGPRIANSVGLMYQSGEEERGSWEEWLGAAGFRGVPVSFANHCQANLLLGLFNDGYRVEELGNNKLVLGWKSRRLISASVWTSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5C8</accession>
    <name>V7B5C8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">rRNA adenine N(6)-methyltransferase</fullName>
            <ecNumber evidence="8">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G161800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6 7 8">Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="8"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5C8"/>
    <dbReference type="SMR" id="V7B5C8"/>
    <dbReference type="STRING" id="3885.V7B5C8"/>
    <dbReference type="Gramene" id="ESW13029">
        <property type="protein sequence ID" value="ESW13029"/>
        <property type="gene ID" value="PHAVU_008G161800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0820">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANYRTWC"/>
    <dbReference type="OrthoDB" id="74991at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000179">
        <property type="term" value="F:rRNA (adenine-N6,N6-)-dimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000007">
        <property type="entry name" value="rRNA adenine N(6)-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00607">
        <property type="entry name" value="16SrRNA_methyltr_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020596">
        <property type="entry name" value="rRNA_Ade_Mease_Trfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020598">
        <property type="entry name" value="rRNA_Ade_methylase_Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011530">
        <property type="entry name" value="rRNA_adenine_dimethylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00755">
        <property type="entry name" value="ksgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="DIMETHYLADENOSINE TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727:SF7">
        <property type="entry name" value="DIMETHYLADENOSINE TRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00650">
        <property type="entry name" value="rADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01131">
        <property type="entry name" value="RRNA_A_DIMETH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51689">
        <property type="entry name" value="SAM_RNA_A_N6_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 8" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 7 8" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 7 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Ribosomal RNA adenine methylase transferase N-terminal" evidence="10">
        <location>
            <begin position="39"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="269"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="280"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00061109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW13029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="39620" checksum="62372DBD650B7B4F" modified="2014-02-19" version="1">MAGGKAKKEKAKAPQHMPYQGGISFHKSKGQHILKNPLLVDSIVQKSGVKPTDVVLEIGPGTGNLTKKLLEAAKKVIAVEIDPRMVLELQRRFQGTPHSNRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFKLLNHQPVFRAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKVGRNNFRPPPKVDSSVVRIEPRKPRIEVKLKEWDGFLRICFNRKNKTLGSIFRQKSVISLLEKNYRTVRALELGQKDSLKEADTKTDLASFGDDQGMEMDDDEADDDEMEVEDGETDEVQSEFKDKVLGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5R1</accession>
    <name>V7B5R1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G091500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5R1"/>
    <dbReference type="SMR" id="V7B5R1"/>
    <dbReference type="Gramene" id="ESW12183">
        <property type="protein sequence ID" value="ESW12183"/>
        <property type="gene ID" value="PHAVU_008G091500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ASSKCHA"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932">
        <property type="entry name" value="ATPASE EXPRESSION PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47932:SF63">
        <property type="entry name" value="OS08G0290000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="79"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="145"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="181"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="276" mass="31079" checksum="C16C241A47CA2478" modified="2014-02-19" version="1">MFDEMLESGVEPNSVTYSVLIRGVLWERDVEGGRELICRLWEMMSVEAEDSVKTAAFANLVGSLCRIAEELPFGSGLFEEVAYGQMVDSLCRVERHNGAARIVYVMRKRGFVPGEVSYNYVIHGLSRDELLNLLVFMPENQYLTGVISLNTVINGFCKMGRVDEASKVLHDMLMGKFAAPDVVTFTTLIYGMLDAASINEAHDLFHKLMPENGIKPSVVTYNALLREMKKNGLTPDSMTWRILDKLNGKGVKDIHSEDPTMSTFYEPRHEVRIEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6B5</accession>
    <name>V7B6B5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G078100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6B5"/>
    <dbReference type="SMR" id="V7B6B5"/>
    <dbReference type="Gramene" id="ESW12021">
        <property type="protein sequence ID" value="ESW12021"/>
        <property type="gene ID" value="PHAVU_008G078100g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10302861at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8514" checksum="EDC240A502F55208" modified="2014-02-19" version="1">MKLCQRRTFWAHREPIIGMLGQGQPDAQFSKAAPVIACMYSRLLSSLKVMDKLTKAAIGRGRNTGEPPTIQQRRNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7N8</accession>
    <name>V7B7N8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Tropinone reductase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G117100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7N8"/>
    <dbReference type="SMR" id="V7B7N8"/>
    <dbReference type="STRING" id="3885.V7B7N8"/>
    <dbReference type="Gramene" id="ESW12486">
        <property type="protein sequence ID" value="ESW12486"/>
        <property type="gene ID" value="PHAVU_008G117100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIPMRRI"/>
    <dbReference type="OrthoDB" id="417891at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045000">
        <property type="entry name" value="TR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898:SF101">
        <property type="entry name" value="ENOYL-(ACYL CARRIER) REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42898">
        <property type="entry name" value="TROPINONE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="244" mass="26597" checksum="0D7AB4A151178241" modified="2014-02-19" version="1">MDDVGLYAERGVNAKIPNIFDGVEKVPEGEGEPKLSSIKDKRWSLDGKTALVTGGTRGIGHAIVEELAEFGASIHVCSRKEEDINRCLEEWKKKGFNVTGSVCDVLHRHQRQTLMETVSSIFQGKLNILVNNKGLDLSKQIIDNTAEDISTVMATNFESAFHLTQLAHPLLKESGFGNIVFISSIAGVKALPLSSAYSASKGAMNQFTKNVALEWAKDNIRANAVAPGPIWTPLLESVMVCFKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B878</accession>
    <name>V7B878_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Peptidase M50 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G225100g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B878"/>
    <dbReference type="STRING" id="3885.V7B878"/>
    <dbReference type="Gramene" id="ESW13775">
        <property type="protein sequence ID" value="ESW13775"/>
        <property type="gene ID" value="PHAVU_008G225100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVZT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="5738at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06160">
        <property type="entry name" value="S2P-M50_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044838">
        <property type="entry name" value="EGY1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31412">
        <property type="entry name" value="ZINC METALLOPROTEASE EGY1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31412:SF5">
        <property type="entry name" value="ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="340"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="445"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="492"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M50" evidence="14">
        <location>
            <begin position="282"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="59"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="73"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW13775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="522" mass="56699" checksum="09FDCB56418A31F2" modified="2014-02-19" version="1">MSLSLAAPSAFRGNLLLPLSRCTSCFEFDLRFHHSRGFPHSRRRFTSFKLFRNPRSSRRRGIACSVTEPQNGNDEKENEAYKNGETLPSEDSSEQSISPPVDGEQLNEFSDANKDQNDVQNVDSDEVASGSPLPGVKPQKLDEAIQIPKEAIEILRNQVFGFDTFFVTSQDPYEGGVLFKGNLRGQAAKSYDKISKRLKDKFGDEYKLFLLVNPEDDKPVAVVVPRTTLQPETTAVPEWFAAGAFGLVTVFTLLIRNVPALQSDLLSAFDNLNLLKDGLSGALVTALILGVHELGHFLAAKDCGVKLGVPYFVPSWQIGSFGAITRIRNIVPNREDLLKVAAAGPIAGYCLGLLLLLLGFVLPPSDGIGVVVDASVFHESFLAGGIAKLLLGNVLKEGTAISINPLVIWAWAGLLINAINSIPAGELDGGRISFALWGRKASLRITGVSIALLGLSSLLNDVAFYWVVLIFFLQRGPIAPLSEEITDPGEKYVAIGIIVLLLGLLVCLPYPFPFTDETLTSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9I8</accession>
    <name>V7B9I8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G204800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">EF-1 is composed of 4 subunits: alpha, beta (1B-alpha=beta'), delta (1B-beta), and gamma (1B-gamma).</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the EF-1-beta/EF-1-delta family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9I8"/>
    <dbReference type="SMR" id="V7B9I8"/>
    <dbReference type="STRING" id="3885.V7B9I8"/>
    <dbReference type="Gramene" id="ESW13533">
        <property type="protein sequence ID" value="ESW13533"/>
        <property type="gene ID" value="PHAVU_008G204800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1668">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NVARWFA"/>
    <dbReference type="OrthoDB" id="331763at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005853">
        <property type="term" value="C:eukaryotic translation elongation factor 1 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005085">
        <property type="term" value="F:guanyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00292">
        <property type="entry name" value="EF1B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.60:FF:000001">
        <property type="entry name" value="Elongation factor 1-beta 1 like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036219">
        <property type="entry name" value="eEF-1beta-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049720">
        <property type="entry name" value="EF1B_bsu/dsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014038">
        <property type="entry name" value="EF1B_bsu/dsu_GNE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribsomal_bS6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001326">
        <property type="entry name" value="Transl_elong_EF1B_B/D_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11595">
        <property type="entry name" value="EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11595:SF84">
        <property type="entry name" value="ELONGATION FACTOR 1-BETA 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00736">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00888">
        <property type="entry name" value="EF1_GNE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54984">
        <property type="entry name" value="eEF-1beta-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="GST C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00824">
        <property type="entry name" value="EF1BD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00825">
        <property type="entry name" value="EF1BD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange" evidence="7">
        <location>
            <begin position="132"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="221" mass="24187" checksum="557E57FA2AE41B6F" modified="2014-02-19" version="1">MAVTFSDLHTEEGIKSLDQFLSGKTYISGDLFTKDDIKVYAAVVEKPGDSFPNASKWYDVVSSHVASSFPGKAEGVRFSAVAAPAAPAKAAATAEEDDDDLDLFGDETEEDKKVAEEREAAKKSTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLVEEQLTVEPRNEYIQSCDIVAFNKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9X4</accession>
    <name>V7B9X4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NAB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G182000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9X4"/>
    <dbReference type="SMR" id="V7B9X4"/>
    <dbReference type="STRING" id="3885.V7B9X4"/>
    <dbReference type="Gramene" id="ESW13266">
        <property type="protein sequence ID" value="ESW13266"/>
        <property type="gene ID" value="PHAVU_008G182000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQVH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ATQKRVC"/>
    <dbReference type="OrthoDB" id="616075at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003779">
        <property type="term" value="F:actin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011684">
        <property type="entry name" value="NAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056889">
        <property type="entry name" value="NET2A-D/KIP1-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056888">
        <property type="entry name" value="NET2A-D/KIP1-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31631:SF3">
        <property type="entry name" value="PROTEIN NETWORKED 2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31631">
        <property type="entry name" value="PROTEIN NETWORKED 2D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07765">
        <property type="entry name" value="KIP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25014">
        <property type="entry name" value="NET2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24918">
        <property type="entry name" value="NET2A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51774">
        <property type="entry name" value="NAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAB" evidence="4">
        <location>
            <begin position="10"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="111"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="487"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="318"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="391"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="594"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="769"/>
            <end position="796"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="119"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="488"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW13266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="980" mass="112633" checksum="F4EC1D79E8C4C630" modified="2014-02-19" version="1">MLQRAASNAYSWWWASHIRTKQSKWLDQSLHDMEEKVAETLAVLRDEGDSFAKRAEMYYKKRPELVNFVEETFRAYKALADRYDHLSKELQSANRTIASVFPDQVPCHIEEDEEEESDTGTNTLSSDPNNNQTHDKPSIPKVPKTPKKEFRNPSMLISRKGTLKRTASSAKYIPTISCSGLTKVEALGEIDKLQKEILSQQTEKEFVRSLYERAYGKYWEIEDQIAATQKRVCSLQDEFGVGTVIEDNDARALMAATALKSCQETLDKLKEIQAQSSKEAKEEYQRVKKAHEMFETLRDQFISKYMTGQLDHDDGEKCTSERTDRKCIDEEMDRLEQEASDVGQLREKIKRKLEEDPRNSFTVTEMAECIDELVNKVCTLETAVSSQTGLVKRLRSDTDGLQTNIRKLEEDKEMLIEGSEATNKKLKELERELWRVKMLNRSVRSQDNTLQTHFTEASCNLEHLSGKLIYMKPDEEEENLVLYRKNRTASDGKPEKPSAKHGVDFSVGNSDVKTINEDDGANADKNKYNSVGSSFVNERIQKLPLHENDYLSDTVSNIDNESQDLATSEGDQPNWRQMFMSGLDDREKILLEEYTSVLLNYKELRGKLNEVEKKNRDSIFELTLQLREMKNALIAKDKEIQSLHQKLNFPDTNPDESPYSNTTEYKYTPNEALFRKVSQRAYGSDSEVLRLNTDPNAVTTPFSEYQGETESTRNMYVSSLKMTLQKLMEHQDKRHDLSNLEQKFRSDIDDLMEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIRERNNKSEGYSHHKQQPIQSELRPIFRHLREIRTELSLWVEHNAVLQDELQGRYSSLSNIQDEIARAGNAESGADQAELISKYQGAKFQGEILNMKQENSKVASELQAGLSLVKGMKVDVEKTLDELDEAIGVNTSPDKNASEMKKSTTRARIPLRSFLFGVKLKNKKNHPSLFACVNPALQRQHSFNEAPAPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAJ9</accession>
    <name>V7BAJ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G234300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAJ9"/>
    <dbReference type="SMR" id="V7BAJ9"/>
    <dbReference type="STRING" id="3885.V7BAJ9"/>
    <dbReference type="Gramene" id="ESW13883">
        <property type="protein sequence ID" value="ESW13883"/>
        <property type="gene ID" value="PHAVU_008G234300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT4N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KKQCTSA"/>
    <dbReference type="OrthoDB" id="687495at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048766">
        <property type="term" value="P:root hair initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd11454">
        <property type="entry name" value="bHLH_AtIND_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000046">
        <property type="entry name" value="Transcription factor bHLH83"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914:SF59">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH83-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45914">
        <property type="entry name" value="TRANSCRIPTION FACTOR HEC3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="207"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="186"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="24"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="32168" checksum="D72B6363D24FFDAA" modified="2014-02-19" version="1">MALSLTSHGVNQYQKSGVEEEDGSQSTNGLSNDSASAITQCPPLCGIGNDYVQKSTHCHLEEAESLINFKANEFSNLMQGSESFLSFQQSWLFSKESNLHEGCDQWNHVSPKSTTDMRLVQNFSCSETATCYSSMFKGAKEKQQHGESSSSGWLYSEPNGHSDSVNESAAQELVLRKRSFMGETMQAANAKKPCTTASKATKPKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAILSSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCK0</accession>
    <name>V7BCK0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Cell wall hydroxyproline-rich glycoprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_007G060800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCK0"/>
    <dbReference type="SMR" id="V7BCK0"/>
    <dbReference type="STRING" id="3885.V7BCK0"/>
    <dbReference type="Gramene" id="ESW15295">
        <property type="protein sequence ID" value="ESW15295"/>
        <property type="gene ID" value="PHAVU_007G060800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTD8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GFTSNWY"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000224">
        <property type="entry name" value="Leucine-rich repeat extensin-like protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000383">
        <property type="entry name" value="Leucine-rich repeat receptor protein kinase EMS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051582">
        <property type="entry name" value="LRR_extensin-like_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32093">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32093:SF121">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0379">Hydroxylation</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 12" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754403" description="Cell wall hydroxyproline-rich glycoprotein" evidence="12">
        <location>
            <begin position="35"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="Leucine-rich repeat-containing N-terminal plant-type" evidence="13">
        <location>
            <begin position="53"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="374"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="11">
        <location>
            <begin position="374"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00041871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW15295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="401" mass="44195" checksum="6C9F4C81E54BF2E3" modified="2014-02-19" version="1">MASHSPKRKGPYLNVLSQVSLLLILISLINPSQAQHSSSPLPPLNPRLSKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCAPAPDDPHIYTVAGVDLNHATISGSLPEELGLLTDLALFHINSNRFCGSLPSTFDQLNLLHELDISNNQFSGPFPEVLLCISSLKYLDIRFNNFYGSIPSRLFDLKLDALFINNNNFKFSLPDNFANTSVSVLVFANNDLKGCLPSSLAKMKGTLNEIIITNSGLTGCLPSEIGDLDKLTVFDVSFNKLVGDLPESLGKMKKLEQLNVAHNMLSGTIPESVCMLPKLENFTYSYNYFCSESPLCLKLKDTDDTKNCIPYRPLQRSPDECEAFYKYPVHCSAFGCVSPPPPPPPPPPPPPPPPPPPPPPAKYHHYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD15</accession>
    <name>V7BD15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNL-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G017400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD15"/>
    <dbReference type="SMR" id="V7BD15"/>
    <dbReference type="STRING" id="3885.V7BD15"/>
    <dbReference type="Gramene" id="ESW14788">
        <property type="protein sequence ID" value="ESW14788"/>
        <property type="gene ID" value="PHAVU_007G017400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3277">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INPHAFT"/>
    <dbReference type="OrthoDB" id="512667at2759"/>
    <dbReference type="PhylomeDB" id="V7BD15"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:protein-folding chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030150">
        <property type="term" value="P:protein import into mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050821">
        <property type="term" value="P:protein stabilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024158">
        <property type="entry name" value="Mt_import_TIM15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007853">
        <property type="entry name" value="Znf_DNL-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20922:SF15">
        <property type="entry name" value="A_TM021B04.14 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20922">
        <property type="entry name" value="DNL-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05180">
        <property type="entry name" value="zf-DNL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51501">
        <property type="entry name" value="ZF_DNL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DNL-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW14788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="214" mass="23619" checksum="F6CC9B2DA5442F76" modified="2014-02-19" version="1">MMMMETLATSSSAALSSSSSPFSIFPSTRTLLSPPKTLQFRLPSKRDDARDSDTENNTFPIISDRCLSLSPLSKDAAMGLVLSAAVGRGWTTGSGMEGPSVPAVGRDNESGNISTFPWSLFTKSPRRRMLVAFTCTICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDHLNLFQETNCYLNSSFKYKGEGWDDLKFRYMDDNDDEDTFPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD78</accession>
    <name>V7BD78_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G100500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD78"/>
    <dbReference type="SMR" id="V7BD78"/>
    <dbReference type="STRING" id="3885.V7BD78"/>
    <dbReference type="Gramene" id="ESW15769">
        <property type="protein sequence ID" value="ESW15769"/>
        <property type="gene ID" value="PHAVU_007G100500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTMERHE"/>
    <dbReference type="OrthoDB" id="1843873at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044822">
        <property type="entry name" value="Myb_DNA-bind_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33492:SF11">
        <property type="entry name" value="OS04G0670900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33492">
        <property type="entry name" value="OSJNBA0043A12.37 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13837">
        <property type="entry name" value="Myb_DNA-bind_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb-like" evidence="3">
        <location>
            <begin position="46"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="191"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="280"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="72"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="82"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="191"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="219"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="237"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW15769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="342" mass="38928" checksum="9D9958A04CA87048" modified="2014-02-19" version="1">MSDPSTTPLPHPPLLPEAHRQPLHHHPLPLIQGATAAAPSSSSSLAREYRKGNWTIQETLILITAKKLDDERRLKTPHDPTRPACSSTTSSSARTSGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSQQQQHQQSHEIKHFPSYWTLNKQQRKEQNLPSNMVYEVYHAITEVLQRKQTQPQLQSQTQTQRQPQQQPPVALITVSSPPPPPPPPVSSTTPAVSERSESSGTEHSEDDADDGSESKRRKVKNLGSSIMRSASVLARALRSCEEKKEKRHRELIELEQRRLQMEEARDEVHRQGIATLVAAVTNLSGAIQSLINSERHGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDJ0</accession>
    <name>V7BDJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">G protein gamma domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G111000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDJ0"/>
    <dbReference type="SMR" id="V7BDJ0"/>
    <dbReference type="STRING" id="3885.V7BDJ0"/>
    <dbReference type="Gramene" id="ESW15887">
        <property type="protein sequence ID" value="ESW15887"/>
        <property type="gene ID" value="PHAVU_007G111000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S439">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SPAWDRW"/>
    <dbReference type="OrthoDB" id="1934467at2759"/>
    <dbReference type="PhylomeDB" id="V7BDJ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007186">
        <property type="term" value="P:G protein-coupled receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015898">
        <property type="entry name" value="G-protein_gamma-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045878">
        <property type="entry name" value="GG1/2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35129:SF6">
        <property type="entry name" value="G PROTEIN GAMMA DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35129">
        <property type="entry name" value="GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00631">
        <property type="entry name" value="G-gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01224">
        <property type="entry name" value="G_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="G protein gamma" evidence="7">
        <location>
            <begin position="31"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW15887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="106" mass="12038" checksum="FEB58DF0EA192D0C" modified="2014-02-19" version="1">MQSRGPESASPMTHRVQSLSSADTRGKHRIHAELKRLEQEARFLEEELEKLERMEKASTACKGMLSNVETKPDPLLPSTIGPVSPTWDRWFEGPQDSKGCCRCWIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDW1</accession>
    <name>V7BDW1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G044900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDW1"/>
    <dbReference type="STRING" id="3885.V7BDW1"/>
    <dbReference type="Gramene" id="ESW15108">
        <property type="protein sequence ID" value="ESW15108"/>
        <property type="gene ID" value="PHAVU_007G044900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SNS8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEPVQLI"/>
    <dbReference type="OrthoDB" id="651283at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="169"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="296" mass="32309" checksum="C7D514BC9AB3A4BA" modified="2014-02-19" version="1">MESSQHISEEWGSLYGLHTTEEADFMAQLFGEKHYGNTTLGFWPGNESTTVTIKGTDSNSYFLSNVTDINLCFLQGSSCSIDTGNSIFSTTSSGPYSCDPATNFDSVSMAFCLGDAQFSPHSFQCNDNSSQQINENTDEESSLALADNNLQAKREYEMMVSEHVQEVRSGNLENLTKRLRSSKEVSKTLRNAKLKKNSKSASMNKNEDDRSLNLQGFGCFSQGDSSASLKPNGGASKDPAPPNLLRKSRASNGPATDPQSLYARLLSSDDMWMYAPIAYNGINIGLDLSICPTKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEH9</accession>
    <name>V7BEH9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY</fullName>
            <ecNumber evidence="3">2.4.1.255</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G119800g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyltransferase 41 family. O-GlcNAc transferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.255" evidence="3"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEH9"/>
    <dbReference type="SMR" id="V7BEH9"/>
    <dbReference type="STRING" id="3885.V7BEH9"/>
    <dbReference type="Gramene" id="ESW15985">
        <property type="protein sequence ID" value="ESW15985"/>
        <property type="gene ID" value="PHAVU_007G119800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNESEHF"/>
    <dbReference type="OrthoDB" id="421121at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097363">
        <property type="term" value="F:protein O-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009740">
        <property type="term" value="P:gibberellic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006493">
        <property type="term" value="P:protein O-linked glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000131">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000181">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000303">
        <property type="entry name" value="Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11380:FF:000002">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11380:FF:000003">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000070">
        <property type="entry name" value="probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037919">
        <property type="entry name" value="OGT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029489">
        <property type="entry name" value="OGT/SEC/SPY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44366">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44366:SF1">
        <property type="entry name" value="UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13844">
        <property type="entry name" value="Glyco_transf_41"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13414">
        <property type="entry name" value="TPR_11"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="13"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50293">
        <property type="entry name" value="TPR_REGION"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0939">Gibberellin signaling pathway</keyword>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="8 10" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="99"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="133"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="167"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="201"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="235"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="269"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="303"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="337"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="405"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="439"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="10">
        <location>
            <begin position="473"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="12">
        <location>
            <begin position="520"/>
            <end position="758"/>
        </location>
    </feature>
    <feature type="domain" description="O-GlcNAc transferase C-terminal" evidence="12">
        <location>
            <begin position="770"/>
            <end position="956"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF13844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW15985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="989" mass="111859" checksum="194708E1D0F3B712" modified="2014-02-19" version="1">MISVQGDHHHPSRHHYHHQPQLPGPADTSRPQFTGDHVEPFSVKQEPASLTLLPLRGHDSTEVEEDMHLSLAHQMYKSGNYKQALEHSNTVYERNPLRTDNLLLLGAIYYQLHDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALGIQPTFAIAWSNLAGLFMESGDFNRAVEYYKEAVKLKPSFPDAYLNLGNVYKALGMSQEAIACYQHALQTRPKYAMAYGNLASIYYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYLDAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVTDAIQDYIRAIAVRPTMAEAHANLASAYKDSLHVEAAVKSYKQALILRPDFPEATCNLLHTLQCVCCWEDRDKMFKEVEEIIRKQINMSVLPSVQPFHAIAYPLDPMLALEISRKYAAHCSVIASRFALPAFTHPAPIPIKRDGGYERLRLGYVSSDFGNHPLSHLMGSVFGMHNKKNVEVFCYALSANDGTEWRQRIQSEAEHFVDVSAMSSDSIAKMINEDKIHILVNLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLRYAHIYSEKIVHLPHCYFVNDYKQKNQDVLNPNCPHKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEMRLRAYVAAQGVQPDQIIFTDVAMKNEHIRRSSLADLFLDTPLCNAHTTGTDILWAGLPMVTLPLEKMATRVAGSLCLATGLGEEMIVSSMKEYEERAVSLALNRPKLQALTSKLKAVRMTCPLFDTARWVRNLERSYFRMWNLHCSGQRPQHFKVTENDLECPYDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEY0</accession>
    <name>V7BEY0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G073600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEY0"/>
    <dbReference type="Gramene" id="ESW15453">
        <property type="protein sequence ID" value="ESW15453"/>
        <property type="gene ID" value="PHAVU_007G073600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4FZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRMPNEM"/>
    <dbReference type="OrthoDB" id="1902316at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007346">
        <property type="term" value="P:regulation of mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039326">
        <property type="entry name" value="Patronus"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35125">
        <property type="entry name" value="NEURON NAVIGATOR 1-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35125:SF2">
        <property type="entry name" value="PROTEIN PATRONUS 2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="257" mass="28084" checksum="99ACC7170A22AE9F" modified="2014-02-19" version="1">MAARNGRLLQNQNLINVHVHGAGSVSGKADLPGQRKGRVGGRKPLGDLSNAGNLINQFDGKKALDGSLNIGKPSVNKAPKLQKSKNLETDKRIGNKASGKSLTGSRKALSDISNSGKPQVPENKDKHTLKPCSLIEESLPPSAIAEEWILHDHKKCIKSQLENEDVHQFFKTVGLEDDADDHMAMSFELSAISKLKSESAYFELEEIPEWLPERQSLSALCGSPTNCKTPGLSTYRTMWSDSTVNFKLIETPKLSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH45</accession>
    <name>V7BH45_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription initiation factor TFIID subunit 13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G215700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TAF13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH45"/>
    <dbReference type="SMR" id="V7BH45"/>
    <dbReference type="STRING" id="3885.V7BH45"/>
    <dbReference type="Gramene" id="ESW17157">
        <property type="protein sequence ID" value="ESW17157"/>
        <property type="gene ID" value="PHAVU_007G215700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3901">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CERAMNV"/>
    <dbReference type="OrthoDB" id="10266074at2759"/>
    <dbReference type="PhylomeDB" id="V7BH45"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009793">
        <property type="term" value="P:embryo development ending in seed dormancy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009960">
        <property type="term" value="P:endosperm development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006366">
        <property type="term" value="P:transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07978">
        <property type="entry name" value="HFD_TAF13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000042">
        <property type="entry name" value="Transcription initiation factor TFIID subunit 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003195">
        <property type="entry name" value="TFIID_TAF13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11380:SF5">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11380">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02269">
        <property type="entry name" value="TFIID-18kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00038392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00040136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="136" mass="15384" checksum="2D0A94A6962F7CA7" modified="2014-02-19" version="1">MSSSAAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVTLMEDIVVEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESDEEKLRKVFEVDETVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHB9</accession>
    <name>V7BHB9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cyclin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G1431001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHB9"/>
    <dbReference type="STRING" id="3885.V7BHB9"/>
    <dbReference type="Gramene" id="ESW16273">
        <property type="protein sequence ID" value="ESW16273"/>
        <property type="gene ID" value="PHAVU_007G1431001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0794">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10266018at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="66" mass="7558" checksum="EEDE442605C612D1" modified="2014-02-19" version="1" fragment="single">KKVMKVHTGRGLVNDTYKMDLILVHPPHLIALACIYIASVLRDKDTTAWFEELRVDMNVASVPLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHV8</accession>
    <name>V7BHV8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tify domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G158700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHV8"/>
    <dbReference type="STRING" id="3885.V7BHV8"/>
    <dbReference type="Gramene" id="ESW16463">
        <property type="protein sequence ID" value="ESW16463"/>
        <property type="gene ID" value="PHAVU_007G158700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTHK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1409779at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042393">
        <property type="term" value="F:histone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000977">
        <property type="term" value="F:RNA polymerase II transcription regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045944">
        <property type="term" value="P:positive regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032308">
        <property type="entry name" value="TDBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47025">
        <property type="entry name" value="AUTOIMMUNE REGULATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47025:SF9">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16135">
        <property type="entry name" value="TDBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tify" evidence="3">
        <location>
            <begin position="429"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="530" mass="58348" checksum="975BDA778360CF57" modified="2014-02-19" version="1">MSFHNQAFWMGKSPGCLNDGDMTNDNSSRIDSKRACSWFMDDPDLDLLPNKKQAVDAPNNLLSGILNSNVPSWGNSSGFHSLNGHFTEQIFGPDAANMTFEDANTPSVSMDDKLSVERKDNMDPFGSGSSFGLSISTALEDPRLVFNYDGIRKVRVNEVKGSENVMSVTTKNPYDRGVSDTLSNPCLYKAGDNSMSANLNYNKGGANIIAMNGSYDSTDNNFMSMGQSYNKGNDSLSVHPTFNEICNTVSMDEGFSKVDSNVISIAQAYNKAHGNSMLTNQLYNKVDNGTISSHYTYHKEGNDVPFVPRSYDNGESTIICFGSRDDDTTPSDLFISEYELLMCQALSHKSEAVKEKEMVTSSSNLLPSTTQTSAPGTENILKTKEEIKMSKKAISNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAYEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTVTGSPINQKSFCIWKESFLAAAGNSSTYVQNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJM4</accession>
    <name>V7BJM4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Growth-regulating factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G222300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription activator.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4 5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="5">The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the GRF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJM4"/>
    <dbReference type="STRING" id="3885.V7BJM4"/>
    <dbReference type="Gramene" id="ESW17233">
        <property type="protein sequence ID" value="ESW17233"/>
        <property type="gene ID" value="PHAVU_007G222300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTJ4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PWHWGRG"/>
    <dbReference type="OrthoDB" id="1927209at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099402">
        <property type="term" value="P:plant organ development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014978">
        <property type="entry name" value="Gln-Leu-Gln_QLQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031137">
        <property type="entry name" value="GRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014977">
        <property type="entry name" value="WRC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31602:SF63">
        <property type="entry name" value="GROWTH-REGULATING FACTOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31602">
        <property type="entry name" value="GROWTH-REGULATING FACTOR 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08880">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08879">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00951">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51666">
        <property type="entry name" value="QLQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51667">
        <property type="entry name" value="WRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="3 4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="QLQ" evidence="7">
        <location>
            <begin position="73"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="WRC" evidence="8">
        <location>
            <begin position="138"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="164"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Bipartite nuclear localization signal" evidence="4">
        <location>
            <begin position="143"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Bipartite nuclear localization signal" evidence="4">
        <location>
            <begin position="171"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="165"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="201"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="211"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW17233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="36596" checksum="AD730607D289EA29" modified="2014-02-19" version="1">MDLQLKQWRNHHESEQQHSPNMPKFLPQHHPPPACAALPLFLPQPSTKVIILPSFSDSTLPSAPPRFPRKESCFSFAQRQELELQSLIFRYMQADAPVPPQLLQPIKKSFLHYPPLFLHLYHPALLESGYYWRREAEDPEPGRCRRTDGKKWRCSREAMDDQKYCQRHMHRGRNRSRKPVEQSNAPSSSPSPFFKHHHLLHLNQSSSGAKSDSKSLSENHDPVDGDGRSGGHVLRHFFDDLPRTLPEPDHGENNGIQSNNNGTYLSMSTPGITSSDVSLKLSTGHASMEGPLAEALRSSTSTSSPTSVLLQLPTSSACETNFISM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLG6</accession>
    <name>V7BLG6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G0707002g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLG6"/>
    <dbReference type="STRING" id="3885.V7BLG6"/>
    <dbReference type="Gramene" id="ESW18792">
        <property type="protein sequence ID" value="ESW18792"/>
        <property type="gene ID" value="PHAVU_006G0707002g"/>
    </dbReference>
    <dbReference type="OMA" id="GVHHEGP"/>
    <dbReference type="OrthoDB" id="41532at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052810">
        <property type="entry name" value="Plant_NAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47370">
        <property type="entry name" value="ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47370:SF1">
        <property type="entry name" value="ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="61" mass="7075" checksum="309C795D94B9D28D" modified="2014-02-19" version="1" fragment="single">WFTSKDVDYAYMATEKDNQASVSLFMDKFGYTKFRTPAILVNPVNHHCFQVSSNIEIARLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLM5</accession>
    <name>V7BLM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G000400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLM5"/>
    <dbReference type="SMR" id="V7BLM5"/>
    <dbReference type="STRING" id="3885.V7BLM5"/>
    <dbReference type="Gramene" id="ESW17945">
        <property type="protein sequence ID" value="ESW17945"/>
        <property type="gene ID" value="PHAVU_006G000400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQES">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EGQTMVC"/>
    <dbReference type="OrthoDB" id="1883654at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043561">
        <property type="entry name" value="LHW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025610">
        <property type="entry name" value="MYC/MYB_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46196:SF2">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14215">
        <property type="entry name" value="bHLH-MYC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23176">
        <property type="entry name" value="bHLH_LHW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="617"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="524"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="588"/>
            <end position="632"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="538"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="597"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="618"/>
            <end position="632"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="831" mass="92289" checksum="23FAA0063635AAE7" modified="2014-02-19" version="1">MAMVEPLNVTSLRNKLKTLCAVDGCSYVILWRIHPQNTLVLRVEDVYCEDQLGEEIVNTVPHVHSMGEGIVGQAALTGKHRWVDSDGQMCEEDYGLHPQFLSGIKTVVVISVKPWGVVQFGSKKKILDRVKFVEQTERLLRGIEDEGLLDVFNSSRDLYLDCENYDLNGLLASISSENLYDWNLKSVHSDNSEMLLGNSCSYASLDDSFPSMDMILVEEGTTPMHGFSYLCDQLAPAVEAQAVFSDRDSNDYSMNTIISRNPSFGTWSGEISSLNSLGQQPVSEIRDEDVEYMHCKEANEFSSNKLAVQDSTLSSLISLNRLLDPTGPFQYHTGFPLDIQHSAQSSIVGEVNYPDTLSMVHDLPKDLEPVDSLEQFSKFFSMNDLCHLLAPSDHSIYGTVTALDESRGCNTPSFGLIGSGGIDDVPVTYQAEHNSSITTTPNMDGQETYSAMHCSENSLLDSMRHHLSCDQAEECWDSVAMLTPVVSAAATNTAFSDCISESNVGTFGSGKRLFSELGIEEFLHGSNFGDQPSTNRKQRTESSPEKRNPKHLTSHALVPKLDITNNLADQKEIFSKSQVGVGGLWINDRNGNTGRAGRADAKPQKVVEHNKVTRKRARPGETTRPRPKDRQQIQDRIGELRGIIPNGGKCSIDSLLDRTIRYMIFLQSITKYADKLQEPSEPKLIEKAKDSSVGDSKKSGGGVTCAFEVEGQTMVCPIIVEDMDPPGQMLIEMLFEEQGSFLEIVDIIGGFGLNILKGKMEIRDTKIWARFIVEANRHVTRIDVFWSLIRVVQQKNTSGADSPNRHCNINDAAFSSMDKYEQQICQYYPCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLT0</accession>
    <name>V7BLT0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SWIRM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_006G004100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLT0"/>
    <dbReference type="STRING" id="3885.V7BLT0"/>
    <dbReference type="Gramene" id="ESW17988">
        <property type="protein sequence ID" value="ESW17988"/>
        <property type="gene ID" value="PHAVU_006G004100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0457">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="270417at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006338">
        <property type="term" value="P:chromatin remodeling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000087">
        <property type="entry name" value="Transcriptional adapter 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007526">
        <property type="entry name" value="SWIRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374:SF20">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTER 2-ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12374">
        <property type="entry name" value="TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50934">
        <property type="entry name" value="SWIRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SWIRM" evidence="2">
        <location>
            <begin position="239"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="187"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="37054" checksum="CBF869825251DDE0" modified="2014-02-19" version="1">MDERGWVVPMLQACVCEPLVAVIQGKLAQIQADEIPMSATEVVLLVDRHVAHHLIVFKCCWRCLGNIVWMRGFPIQLPTPINCISNVVAMLDERKRRKHFILERELLYPDPFEKSLLPEELQICQHYKVFMRFHSKEEHQDFLKNIIEEHRLVKRIQDLQEARIAGCVTAGDAYRFIKEKRTKEAESSSCKESGHIGTSGKTLQRPNNLKGELDISPRGLQKGTAALHADSNDSSTAIQAITRSLEEWDISAFAGAEFLSESEKKLCNEIRILPSHYLNMQQTMSLEISKGSVTKKSDAHKFFKVEPSKVDRVYDMLVQKGILQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BM14</accession>
    <name>V7BM14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Serine/threonine-protein phosphatase</fullName>
            <ecNumber evidence="9">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G088900g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPP phosphatase family. PP-1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="9"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BM14"/>
    <dbReference type="STRING" id="3885.V7BM14"/>
    <dbReference type="Gramene" id="ESW19002">
        <property type="protein sequence ID" value="ESW19002"/>
        <property type="gene ID" value="PHAVU_006G088900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1930084at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07414">
        <property type="entry name" value="MPP_PP1_PPKL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.21.10:FF:000026">
        <property type="entry name" value="Serine/threonine-protein phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050341">
        <property type="entry name" value="PP1_catalytic_subunit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006186">
        <property type="entry name" value="Ser/Thr-sp_prot-phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031675">
        <property type="entry name" value="STPPase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668">
        <property type="entry name" value="SERINE/THREONINE PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11668:SF429">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16891">
        <property type="entry name" value="STPPase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00114">
        <property type="entry name" value="STPHPHTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00156">
        <property type="entry name" value="PP2Ac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="Metallo-dependent phosphatases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00125">
        <property type="entry name" value="SER_THR_PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine/threonine specific protein phosphatases" evidence="11">
        <location>
            <begin position="202"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="382"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="391"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW19002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="402" mass="45452" checksum="697B7F21B67B7F58" modified="2014-02-19" version="1">MACRGDYGEVQREGWNMGVCVCVFRLGHLVHLPKIPIPQLNFLYLSSSSPIFGSTIHPKQTHFLSCVVIGRGKREEGRRKIMMTEGMMDKAVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLELRAPMRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELESLDQIKEIQRPTEIPDSGLLCDLLWSDPDSSIEGWAESDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSSSKMNFKKQPPKMGKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMA4</accession>
    <name>V7BMA4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G019300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMA4"/>
    <dbReference type="SMR" id="V7BMA4"/>
    <dbReference type="Gramene" id="ESW18175">
        <property type="protein sequence ID" value="ESW18175"/>
        <property type="gene ID" value="PHAVU_006G019300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R4BG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THEDIGG"/>
    <dbReference type="OrthoDB" id="1901675at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058546">
        <property type="entry name" value="RPS4B/Roq1-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF422">
        <property type="entry name" value="RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23286">
        <property type="entry name" value="LRR_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0611">Plant defense</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Disease resistance protein Roq1-like winged-helix" evidence="3">
        <location>
            <begin position="306"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein RPS4B/Roq1-like leucine-rich repeats" evidence="4">
        <location>
            <begin position="565"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="899"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF23282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF23286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="899" mass="102451" checksum="97336A451029FA75" modified="2014-02-19" version="1" fragment="single">MLVTQQWRMRLSDDHSLARGRGKGTVSQNMHGVQVKQIVIAAGETTEKYEFQLIQEIIKEASRKLNHTILHIAEYPVGIETRISEVMPLLHIEPGEDIRVIGIHGLGGLGKTTIAGALYNLIADQFEATSFLADTRESSNQRQGLVQLQESLLFYTVEDKNIKLGSIYKGIPIIKKRLCCKKLQALAGGRDWFGFGSVIIITTRDKHLMAAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEICNRAVLYAEGLPLALKVMGSNLFGKTVAEWKSALGKYEKIPSREVQNVLRVTYDNLEENEKEIFLDVARFFKGETMEYVEKTLQACGFYPTFGISVLIYRSLVSIDEYNRLRIHDLIQDMGREIVREVSPIELGKRSRLWHHEDVFEVLTENTVRAIIQSMMVNLPDDYMVHLKDDSLKMMKDLKILTVRNGHFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNLSSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPEISRAPNLTELNLDYCTNLEEVNEFVGFLEKLVEFRAYGRTKLKVFPSAIRLTSLRSLILNWCSSLQNFPAILGKMDNLMSLSIEGTCIKELPSSIGNLYGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLTNMGESTHTFDNIQSLNLENCGLIDEDLPVIFNSFPKLASIETFEGWVLQVMVPGTRVPAWFDHVTKGEYMTFWVREKFPAIIICFALEVESEMEKIFNREIRFYINGEEVYELEIPRGFSDMVTDHVWLYDLRTHSSIHWPSLDSYQMDGWNQVEIACEKISGASNVTVSWCGVHVFKQEANMKDILLTDPDANSDLESEKKHQLGTDQNQDKNLLNEKTLNGVTKDSMLSLTHEDIGGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMA6</accession>
    <name>V7BMA6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box/LRR-repeat protein 15-like leucin rich repeat domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G261900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMA6"/>
    <dbReference type="SMR" id="V7BMA6"/>
    <dbReference type="STRING" id="3885.V7BMA6"/>
    <dbReference type="Gramene" id="ESW17706">
        <property type="protein sequence ID" value="ESW17706"/>
        <property type="gene ID" value="PHAVU_007G261900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1947">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRYCHLK"/>
    <dbReference type="OrthoDB" id="550575at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019005">
        <property type="term" value="C:SCF ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031146">
        <property type="term" value="P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000535">
        <property type="entry name" value="Leucine Rich Repeat family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057207">
        <property type="entry name" value="FBXL15_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006553">
        <property type="entry name" value="Leu-rich_rpt_Cys-con_subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318:SF95">
        <property type="entry name" value="F-BOX PROTEIN YLR352W"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318">
        <property type="entry name" value="PARTNER OF PAIRED, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25372">
        <property type="entry name" value="DUF7885"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13516">
        <property type="entry name" value="LRR_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00367">
        <property type="entry name" value="LRR_CC"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box/LRR-repeat protein 15-like leucin rich repeat" evidence="1">
        <location>
            <begin position="181"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="40457" checksum="F7AF9300A871D7D4" modified="2014-02-19" version="1">MQMEEHGSTEAESKEDIWCRETVPKVFKLVCCTLSLSHIDLVSLLLVSPSLHRTLLSSQPLWENLHLRELKNAGNRLIAALSLPRYRNVKQINLEFARDVDDTHLNHLKDKCFNSLQSLESLNLNCCQKISDTGIEAISSCCPRLKSFLIYWNLRVTDRGLQYIVKNCKHIVDLNISGCKNISDQGVQLVADNYPELESLNLTRCVKLTDDGLKSLLQKCLFLQHLNLYALSSFTDEAYRNICLLSRLKFLDLCGAQNLSDEGLSCISKCKNLESLNLTWCVRVTDEGVISIAKGCTSLQFLSLFGIVGVTDKCLEALSKSCSNKITTLDVNGCIGIKKRSREDLLQLFPYVQCYKVHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN41</accession>
    <name>V7BN41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NAD-dependent epimerase/dehydratase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G122600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN41"/>
    <dbReference type="SMR" id="V7BN41"/>
    <dbReference type="STRING" id="3885.V7BN41"/>
    <dbReference type="Gramene" id="ESW19409">
        <property type="protein sequence ID" value="ESW19409"/>
        <property type="gene ID" value="PHAVU_006G122600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW19410">
        <property type="protein sequence ID" value="ESW19410"/>
        <property type="gene ID" value="PHAVU_006G122600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1371">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFAAHTI"/>
    <dbReference type="OrthoDB" id="9402762at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05247">
        <property type="entry name" value="UDP_G4E_1_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.25.10">
        <property type="entry name" value="UDP-galactose 4-epimerase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005886">
        <property type="entry name" value="UDP_G4E"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01179">
        <property type="entry name" value="galE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43725:SF35">
        <property type="entry name" value="UDP-ARABINOSE 4-EPIMERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43725">
        <property type="entry name" value="UDP-GLUCOSE 4-EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="7">
        <location>
            <begin position="73"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW19409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="45894" checksum="5A73D400CC2FEC91" modified="2014-02-19" version="1">MLNFARTRSQPRSTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPPSPFSIREPGVTHVLVTGGAGYIGSHATLRLLRDFYRVTIVDNLSRGNLGAVRVLQELFPEPGRLQFIYADLGDKESVNKIFSENKFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLLVLESMAKYGVKKLIYSSTCATYGEPEKMPITEETDQKPINPYGKAKKMSEDIILDFSKTSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGITTGLKVRGTDYKTPDGTCIRDYIDVTDLVDAHVKALEKAQPGKVGIYNVGTGKGRSVKEFVDACKKATGVNIKVDLLPRRPGDYAEVYSDPSKINLELNWTAKHTDLEKSLQIAWKWQKSHRNGYGISSAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNV0</accession>
    <name>V7BNV0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G026200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant LTP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNV0"/>
    <dbReference type="SMR" id="V7BNV0"/>
    <dbReference type="Gramene" id="ESW18261">
        <property type="protein sequence ID" value="ESW18261"/>
        <property type="gene ID" value="PHAVU_006G026200g"/>
    </dbReference>
    <dbReference type="OMA" id="CCKSATS"/>
    <dbReference type="OrthoDB" id="1393584at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.110.10">
        <property type="entry name" value="Plant lipid-transfer and hydrophobic proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036312">
        <property type="entry name" value="Bifun_inhib/LTP/seed_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016140">
        <property type="entry name" value="Bifunc_inhib/LTP/seed_store"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000528">
        <property type="entry name" value="Plant_nsLTP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33076">
        <property type="entry name" value="NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14368">
        <property type="entry name" value="LTP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47699">
        <property type="entry name" value="Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754583" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein" evidence="3">
        <location>
            <begin position="26"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="Bifunctional inhibitor/plant lipid transfer protein/seed storage helical" evidence="4">
        <location>
            <begin position="18"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="120" mass="12800" checksum="743F268CB2263D63" modified="2014-02-19" version="1">MGEKRAMAVVMFVMAYGLAVTTLTASEIPATCNGDERMLSFCGVYLVNIKPNPSSDCCKGASDAFKRAMAVANGQGIRDICNCLRVAGPSLNFHQDKLVSLPDACGIKLSFSMHLCIFGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPH2</accession>
    <name>V7BPH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G162100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPH2"/>
    <dbReference type="SMR" id="V7BPH2"/>
    <dbReference type="Gramene" id="ESW19867">
        <property type="protein sequence ID" value="ESW19867"/>
        <property type="gene ID" value="PHAVU_006G162100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4569">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTRCECT"/>
    <dbReference type="OrthoDB" id="426718at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051218">
        <property type="entry name" value="Sec_MonoDiacylglyc_Lipase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45856:SF11">
        <property type="entry name" value="FUNGAL LIPASE-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754812" description="Fungal lipase-type domain-containing protein" evidence="2">
        <location>
            <begin position="22"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="domain" description="Fungal lipase-type" evidence="3">
        <location>
            <begin position="100"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW19867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="40085" checksum="CB947F34A3AE3C02" modified="2014-02-19" version="1">MGKTTWLILVTFLCLFAFSNGRGLKVRQKNHPYKYNHTLATTLVEYASAVYLSDLTELFTWTCARCDDLTKGFDMIELVVDVEHCLQAFVGVAEDPHAIIIAFRGTNEHSLQNWIEDLYWKQHDINYPGMDDAMVHRGFYTAYHNTTIRPAILDAIDRAKKFYGDIQIIATGHSMGGAMASFCGLDLTVNKNEKNVQVMTFGQPRVGNAVFASLYSELVPCTVRVTNDHDIVPHLPPYYYYLPQKTYHHFPREVWLYNIGLGSLVYSVEKICDESGEDPDCSRSVTGNSIADHLVYYGVDMGSDEPSSCRIVMDPYLQSASIKDSRGNIILSKDPATPLIKLSRESGNQKNPINVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQX4</accession>
    <name>V7BQX4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Annexin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G123400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the annexin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQX4"/>
    <dbReference type="SMR" id="V7BQX4"/>
    <dbReference type="Gramene" id="ESW19418">
        <property type="protein sequence ID" value="ESW19418"/>
        <property type="gene ID" value="PHAVU_006G123400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0819">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERAICLW"/>
    <dbReference type="OrthoDB" id="37886at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005544">
        <property type="term" value="F:calcium-dependent phospholipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001786">
        <property type="term" value="F:phosphatidylserine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009409">
        <property type="term" value="P:response to cold"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009651">
        <property type="term" value="P:response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.220.10:FF:000001">
        <property type="entry name" value="Annexin"/>
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    </dbReference>
    <dbReference type="FunFam" id="1.10.220.10:FF:000005">
        <property type="entry name" value="Annexin"/>
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    </dbReference>
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        <property type="entry name" value="Annexin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.220.10:FF:000009">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.10">
        <property type="entry name" value="Annexin"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001464">
        <property type="entry name" value="Annexin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018502">
        <property type="entry name" value="Annexin_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037104">
        <property type="entry name" value="Annexin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009118">
        <property type="entry name" value="AnnexinD_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10502">
        <property type="entry name" value="ANNEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10502:SF193">
        <property type="entry name" value="ANNEXIN D8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00191">
        <property type="entry name" value="Annexin"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00196">
        <property type="entry name" value="ANNEXIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01814">
        <property type="entry name" value="ANNEXINPLANT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00335">
        <property type="entry name" value="ANX"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47874">
        <property type="entry name" value="Annexin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51897">
        <property type="entry name" value="ANNEXIN_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0041">Annexin</keyword>
    <keyword evidence="4 7" id="KW-0106">Calcium</keyword>
    <keyword evidence="6" id="KW-0111">Calcium/phospholipid-binding</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="295"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="298"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>3</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR609118-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW19418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="313" mass="35606" checksum="5289923B53F7E54C" modified="2014-02-19" version="1">MTTLIAANDSSPIEDAENIKNACKGFGTDEAALISILAHRNVTERKLVRMAYEEIYHEDLIQQLKSELSGSFQRGMCKWTMDPAERDAAFIKETLKKETVDYKVIIEIACTRTSEEFLAVKRSYQLLYKHSLEEDVASKTIGDIRRLLVAVVSTYRYEGEEFDESLANLEANILHQAIEKKVFCDDEIIRILSTRSKKQLFATFSTFRNTYGTTITKGLSSDSSDEYMVTLRTTIRCIKNPKRYLAKVICYALNDLVAEEHALSRVIITRAEKDLNEISDLYFKRNGVTLQNSVAEKTSGNYKTFLLALLGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR11</accession>
    <name>V7BR11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_006G206300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="14" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR11"/>
    <dbReference type="SMR" id="V7BR11"/>
    <dbReference type="Gramene" id="ESW20404">
        <property type="protein sequence ID" value="ESW20404"/>
        <property type="gene ID" value="PHAVU_006G206300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW20405">
        <property type="protein sequence ID" value="ESW20405"/>
        <property type="gene ID" value="PHAVU_006G206300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECNSNEM"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000010">
        <property type="entry name" value="Probable protein phosphatase 2C 39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="12">
        <location>
            <begin position="30"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW20404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="30313" checksum="140095F883F11141" modified="2014-02-19" version="1">MACLCCFNQVVGGRSSCSSGKGRSHLCPVKYGFSLVKGKANHPMEDYHVAKFVKCGGKELGLFAIYDGHLGESVPTYLQKHLFSNILKEEDFWTDPARSIIKAYESTDQAILSHSSDLGRGGSTAVTAILINNQKLIVANVGDSRAVLSRKGEAIQVTIDHEPNTERGHIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVHQSDINPDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKKLVAEALDKDSKDDISCIVVRFKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR18</accession>
    <name>V7BR18_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G209200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR18"/>
    <dbReference type="STRING" id="3885.V7BR18"/>
    <dbReference type="Gramene" id="ESW20437">
        <property type="protein sequence ID" value="ESW20437"/>
        <property type="gene ID" value="PHAVU_006G209200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYZD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LTECHAC"/>
    <dbReference type="OrthoDB" id="730111at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38530">
        <property type="entry name" value="OS06G0468300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="350"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="22"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="352"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="48683" checksum="94A756E291C7BF5C" modified="2014-02-19" version="1">MGVSPAMKLLESKERTEEQPESSENPSDSVPQNKKTRDLPNLTECHACGFKVDVCSGKNRLRTLYSEWRVVLLCKKCFVSVESSQICSYCFSGMSLESYRCNQCQHSVHKTCFLKYKNAPPWSYASMGSEFSVCVDCWIPKHLEISRRRKRRVMGDENGRIILEKGSSRVLPGGNLARSMEDLVEDAKREVGEKVEAAARAREGAVKKALVARRAVEIAKNALSLVANGEESSLNPPPKREAFKVLDGSELTFELHPEFNTLPRISKSCCLLNTSFLDAPKRLSPSVDSSCKTSNSRNADYRDKHEVSCDNKLLADSCKSLCEPLVSVGTLDSGSSTGLNLLCMGRSGMETGSKDGERTAESDGEGIGEELQKEGEGSCSDRIINLSEDSCMELDRKQADSALHRVKRCNGQPDRYFLKYSRRNCSLKSKIVISEPKIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRG3</accession>
    <name>V7BRG3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G139300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRG3"/>
    <dbReference type="SMR" id="V7BRG3"/>
    <dbReference type="STRING" id="3885.V7BRG3"/>
    <dbReference type="Gramene" id="ESW19608">
        <property type="protein sequence ID" value="ESW19608"/>
        <property type="gene ID" value="PHAVU_006G139300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0648">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAHGGNF"/>
    <dbReference type="OrthoDB" id="447842at2759"/>
    <dbReference type="PhylomeDB" id="V7BRG3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047631">
        <property type="term" value="F:ADP-ribose diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035529">
        <property type="term" value="F:NADH pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd04670">
        <property type="entry name" value="NUDIX_ASFGF2_Nudt6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.630.30:FF:000016">
        <property type="entry name" value="nudix hydrolase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.79.10:FF:000015">
        <property type="entry name" value="Nudix hydrolase 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.79.10">
        <property type="entry name" value="Nucleoside Triphosphate Pyrophosphohydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003293">
        <property type="entry name" value="Nudix_hydrolase6-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040618">
        <property type="entry name" value="Pre-Nudix"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13994:SF29">
        <property type="entry name" value="NUDIX HYDROLASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13994">
        <property type="entry name" value="NUDIX HYDROLASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18290">
        <property type="entry name" value="Nudix_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01356">
        <property type="entry name" value="GFGPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="Nudix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="4">
        <location>
            <begin position="156"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW19608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="36889" checksum="862B6DA46BC3C4E6" modified="2014-02-19" version="1">MLRLLPKLSLLFSSNRNPRYLTTSLRFISQGRRPTSRVSYPILSAISSAIASETSAEDQAQQIKLLTSTDDYYGGVTVELDHPMDSSAFIPVLRASVSHWKQLGKKGVWIKLPIHLASLVEALVKEGFWYHHAEPNYLMLVYWIPDSPSTIPANATHRVGVGSLLMNEKQEVLVVQENSGLFQGTGIWKLPTGVVDQGEDICVAAVREVKEETGIDSEFVEVLAFRQSHNSFFEKSDLFFVCMLRPLSFNIQTQRFEILDAQWMPFEEYAAQPFVQKSELLKYINDTCLAKMGGQYSGFCPVSTSSNFSDQKNYLYLNAGTLKNSYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRV4</accession>
    <name>V7BRV4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ataxin-10 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G0101000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRV4"/>
    <dbReference type="STRING" id="3885.V7BRV4"/>
    <dbReference type="Gramene" id="ESW20732">
        <property type="protein sequence ID" value="ESW20732"/>
        <property type="gene ID" value="PHAVU_005G0101000g"/>
    </dbReference>
    <dbReference type="OMA" id="ICARDEM"/>
    <dbReference type="OrthoDB" id="379794at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051374">
        <property type="entry name" value="Ataxin-10/CTR86_families"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019156">
        <property type="entry name" value="Ataxin-10_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13255">
        <property type="entry name" value="ATAXIN-10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13255:SF0">
        <property type="entry name" value="ATAXIN-10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09759">
        <property type="entry name" value="Atx10homo_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ataxin-10" evidence="3">
        <location>
            <begin position="91"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW20732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="199" mass="22250" checksum="D2FA193A89AEA6FF" modified="2014-02-19" version="1">MRGKSGLPSGFTGVDVLGYSLTILRDICAQDGMRGNTKDVVDVLLSYGLIEFLLSLLGALEPPAIIRKGLKQIENQDNASCCSKPCPYKGFRRDIVALIGNCVYRRKHAQDEIRDRNGILLLLQQCVPDEDNPFLREWGLWSVRNMLWGNDENQKLVAELEIQGSADVPEINALGLQVEVDQRTRRPKLVNIPSCEKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRW1</accession>
    <name>V7BRW1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G153200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Extracellular space</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRW1"/>
    <dbReference type="SMR" id="V7BRW1"/>
    <dbReference type="STRING" id="3885.V7BRW1"/>
    <dbReference type="Gramene" id="ESW19758">
        <property type="protein sequence ID" value="ESW19758"/>
        <property type="gene ID" value="PHAVU_006G153200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WVDCASR"/>
    <dbReference type="OrthoDB" id="1162128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000041">
        <property type="entry name" value="Basic 7S globulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965">
        <property type="entry name" value="ASPARTYL PROTEASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47965:SF46">
        <property type="entry name" value="BASIC 7S GLOBULIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754919" description="Peptidase A1 domain-containing protein" evidence="5">
        <location>
            <begin position="25"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="6">
        <location>
            <begin position="42"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="410" mass="43635" checksum="3B841687C7BEB276" modified="2014-02-19" version="1">MASSSLLLPLSLALLCLLSATSSAYKSSLTLPVTKDHSTHQYYTTLSYGTPVEAANFVLDLGGSSLWVDCASRTAPSASLSPIFHRSVRCLTAKGPEIETHRWLSSLANPVDQDQACQIPAENSITGKRVGEGELVEDLFQPSHQLLFTCSPTLLLNGLAAGAKGMVGLDRSRTSFSSQVFHTLGTQRKITLCLSPSSGVVQFGNVAHESQPGSEILRSLTFTPLLTNPDQNHPSINVNSVKINGKKVSFDAPLGGGAQLSTVVPYTTLQTSIFANFESAYLKAASILNMSRVSPVSPFGLCFSSNGVGSSQMGPNVPVIDLVLQSEMVKWSIHGRNSMVQVSKDVMCLGFVDGGENPRNPIVIGGYQLEDVLVQFDFDTSMVGFSPSLLTRHASCSDFKSGSSAQPISV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSN5</accession>
    <name>V7BSN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">cytokinin dehydrogenase</fullName>
            <ecNumber evidence="3">1.5.99.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G034000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>N(6)-dimethylallyladenine + A + H2O = 3-methyl-2-butenal + adenine + AH2</text>
            <dbReference type="Rhea" id="RHEA:13625"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15825"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:17660"/>
            <dbReference type="EC" id="1.5.99.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.99.12" evidence="3"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSN5"/>
    <dbReference type="SMR" id="V7BSN5"/>
    <dbReference type="STRING" id="3885.V7BSN5"/>
    <dbReference type="Gramene" id="ESW21017">
        <property type="protein sequence ID" value="ESW21017"/>
        <property type="gene ID" value="PHAVU_005G034000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1231">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIKHIWN"/>
    <dbReference type="OrthoDB" id="415825at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019139">
        <property type="term" value="F:cytokinin dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009690">
        <property type="term" value="P:cytokinin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.462.10:FF:000001">
        <property type="entry name" value="Cytokinin dehydrogenase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.10">
        <property type="entry name" value="FAD-linked oxidases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016170">
        <property type="entry name" value="Cytok_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015345">
        <property type="entry name" value="Cytokinin_DH_FAD/cytokin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050432">
        <property type="entry name" value="FAD-linked_Oxidoreductases_BP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006093">
        <property type="entry name" value="Oxy_OxRdtase_FAD_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878:SF129">
        <property type="entry name" value="CYTOKININ DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13878">
        <property type="entry name" value="GULONOLACTONE OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09265">
        <property type="entry name" value="Cytokin-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="FAD-linked oxidases, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00862">
        <property type="entry name" value="OX2_COVAL_FAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="9">
        <location>
            <begin position="76"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="538" mass="60983" checksum="25C349793833CCE4" modified="2014-02-19" version="1">MSSYRKMRYPSFSLFREYNILFIRGLMILFLSCLTIRLNFCISTIPSSLKALPLKGHFSFEEADLKHVARDFGNRYQSHPMAVLHPKSVSDIADTIKHIWNLGPSSQLTVAARGHGHSLQGQAQSHGGVVINMESLRVPEMQVYTGESPYVDVSGGELWINILHETLRYGLTPRSWTDYLHLTVGGTLSNGGVSGQAFRHGPQISNVQKLEIVTGTGEVVNCSEEQNGDLFHGVLGGLGQFGIITKARIVLEPAPTMVKWIRVLYADFTAFTRDQEKLIFAEKAFDYVEGFVIINRTGLLNNWRSSFNPQDPVQASKFKSDGRTLFCLELAKYYNLEETLVVNQKVEKHLSHLNHIPSTLFQTEVTYVDFLDRVHISEIKLRSKGLWDVPHPWLNLFIPKTKIHHFAEVVFGNIVTETSNGPVLIYPVNKSKWDNRTSVVMPEEDIFYLVAFLASAVPSSNGPDGLENILSQNKKILEYCERSHLGVKQYLPHYTTEEAWRVHFGSQWQIFQHRKSVYDPLAMLAPGQQIFQKSINFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVM3</accession>
    <name>V7BVM3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G118800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVM3"/>
    <dbReference type="SMR" id="V7BVM3"/>
    <dbReference type="STRING" id="3885.V7BVM3"/>
    <dbReference type="Gramene" id="ESW22009">
        <property type="protein sequence ID" value="ESW22009"/>
        <property type="gene ID" value="PHAVU_005G118800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1150">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIVNKAW"/>
    <dbReference type="OrthoDB" id="342454at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46620">
        <property type="entry name" value="J DOMAIN-CONTAINING PROTEIN SPF31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46620:SF1">
        <property type="entry name" value="J DOMAIN-CONTAINING PROTEIN SPF31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="42"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="175"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="225"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="250" mass="29838" checksum="0654EE08E3E0C9EC" modified="2014-02-19" version="1">MGDKNHAATVSDDLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEYLNLSFDSSIDDVKKQYRKLSLMVHPDKCKHPQSKEAFGALAKAQQLLLDQNERDYLLSQVNSAKEELRAKRKKQLKKDTASKIKSLVEEGKYDKQYEQSEEFKQDLKVKVRELLTEQEWRRRKMQMRISEEEGRLKKDEEEQKEMWKRKREHEEEWEGTREKRVSSWRDFMKGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWY1</accession>
    <name>V7BWY1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Thioredoxin-like protein Clot</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Thioredoxin Clot</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G038700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWY1"/>
    <dbReference type="SMR" id="V7BWY1"/>
    <dbReference type="STRING" id="3885.V7BWY1"/>
    <dbReference type="Gramene" id="ESW21066">
        <property type="protein sequence ID" value="ESW21066"/>
        <property type="gene ID" value="PHAVU_005G038700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3425">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EQCAKAD"/>
    <dbReference type="OrthoDB" id="78947at2759"/>
    <dbReference type="PhylomeDB" id="V7BWY1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000259">
        <property type="entry name" value="Thioredoxin-like protein Clot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045108">
        <property type="entry name" value="TXNDC17-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010357">
        <property type="entry name" value="TXNDC17_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12452">
        <property type="entry name" value="42-9-9 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12452:SF0">
        <property type="entry name" value="THIOREDOXIN DOMAIN-CONTAINING PROTEIN 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06110">
        <property type="entry name" value="TXD17-like_Trx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Thioredoxin" evidence="9">
        <location>
            <begin position="13"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00056742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00071006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00083188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="15183" checksum="48B18B9C22916811" modified="2014-02-19" version="1">MPLKLLEATVWNFDGVFEKFRSEAAKNKANLILFLADKDPATSLSWCPDCVRAEPVIYKKLEASSDDIALLRAYVGDRKTWRNPKHPWRVEPRFMLTGVPTLIHWDNDTVKGRLEDYEAHLENKIETLVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX71</accession>
    <name>V7BX71_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G087400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX71"/>
    <dbReference type="SMR" id="V7BX71"/>
    <dbReference type="STRING" id="3885.V7BX71"/>
    <dbReference type="Gramene" id="ESW21643">
        <property type="protein sequence ID" value="ESW21643"/>
        <property type="gene ID" value="PHAVU_005G087400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NLWHYDN"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000349">
        <property type="entry name" value="Transcription factor MYB39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994:SF5">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="HTH myb-type" evidence="6">
        <location>
            <begin position="8"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="5">
        <location>
            <begin position="8"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="5">
        <location>
            <begin position="61"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="6">
        <location>
            <begin position="65"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW21643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="41870" checksum="2C3E69BF244BF250" modified="2014-02-19" version="1">MTNSSTEKNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTIPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLFKMGIDPVTHTPRLDVLQLASILNTSLFNSSPQFNHPFLSGIGRSVINPTHLLSLLSTLLSCQSRNNPDNVLNHNNYQQTISQLSGSNLLQNQPQCSQMQLETIPTFQPNQPQVSLQENLIAKSNPLNMEHQLIKSKLQNQISPLATSFSLQNLWHYDNGDNISGLSVPQSSSAMQCFSSSKFNSIFNNLLGNQNLSHNEGIPNFNLTSLLSSTTSSSPLNSSSSTTFFNGTTEDERDTYGSNILMYNISNGLNDSGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXC2</accession>
    <name>V7BXC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">START domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G093100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXC2"/>
    <dbReference type="SMR" id="V7BXC2"/>
    <dbReference type="STRING" id="3885.V7BXC2"/>
    <dbReference type="Gramene" id="ESW21708">
        <property type="protein sequence ID" value="ESW21708"/>
        <property type="gene ID" value="PHAVU_005G093100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVR9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYINMAP"/>
    <dbReference type="OrthoDB" id="1569773at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042160">
        <property type="entry name" value="HD-Zip_IV"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45654:SF48">
        <property type="entry name" value="START DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="96"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="205" mass="22774" checksum="2B5CF15D25C3F5C2" modified="2014-02-19" version="1">MSIDRASDLLLGFSIYTEPIRTGIIEHAFCGMDELSKIGIAGHPLWQRETNNGCEILNNIEYLRQFGEVDTTLREIVKLMEVGESQNLPSFDTHQTELPTSTVTPTVTPHTQTEGSRDIAYINMAPICIVELLMDVNQWSEVFYNIVSKATIVGTLVGTEGSYDNKLHVNTSLTFFIPMLVRVLSGFSPLSKTSSMQNKASVRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYG7</accession>
    <name>V7BYG7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Protein HIRA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_005G125300g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="15" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the WD repeat HIR1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYG7"/>
    <dbReference type="SMR" id="V7BYG7"/>
    <dbReference type="STRING" id="3885.V7BYG7"/>
    <dbReference type="Gramene" id="ESW22079">
        <property type="protein sequence ID" value="ESW22079"/>
        <property type="gene ID" value="PHAVU_005G125300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22080">
        <property type="protein sequence ID" value="ESW22080"/>
        <property type="gene ID" value="PHAVU_005G125300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0973">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RGSWDGD"/>
    <dbReference type="OrthoDB" id="1741719at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000417">
        <property type="term" value="C:HIR complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031491">
        <property type="term" value="F:nucleosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006338">
        <property type="term" value="P:chromatin remodeling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00200">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000354">
        <property type="entry name" value="Protein HIRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000418">
        <property type="entry name" value="Protein HIRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055410">
        <property type="entry name" value="Beta-prop_CAF1B_HIR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031120">
        <property type="entry name" value="HIR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011494">
        <property type="entry name" value="HIRA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13831">
        <property type="entry name" value="MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13831:SF0">
        <property type="entry name" value="PROTEIN HIRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24105">
        <property type="entry name" value="Beta-prop_CAF1B_HIR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07569">
        <property type="entry name" value="Hira"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82171">
        <property type="entry name" value="DPP6 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="8 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0677">Repeat</keyword>
    <keyword evidence="10" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 10" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 9 10" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="9"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="CAF1B/HIR1 beta-propeller" evidence="13">
        <location>
            <begin position="10"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="121"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="9">
        <location>
            <begin position="163"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Protein HIRA-like C-terminal" evidence="12">
        <location>
            <begin position="689"/>
            <end position="888"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="437"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="521"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="987"/>
            <end position="1032"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="464"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="477"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="521"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="992"/>
            <end position="1003"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="1012"/>
            <end position="1023"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU364014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF24105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW22080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1032" mass="112795" checksum="966C236F9D73B5F1" modified="2014-02-19" version="1">MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTDIENDASSQRLLATLRDHFGSVNCVRWAKHGRFVASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSALASGSLDNTIHVWNMSNGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWSATFDFLGHNAPIIVVKFNHSMFRRNLTNAQEMKSVPVGWSNGTSKTGSKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEVKELGQRLGDAELDELKRSRYGDVKGRKANLAESPAQLLLEAASAKQTTSKKVVVSDVQQNQTKAKAYADVGATTKNAEPQNDDGKKSAGPVGDASNKVTTSGRISSPVKQREYRRPDGRKRIIPEAVGVPVQQENISGAVQQSLDFPIVSSDHRKDTDRTVSNDDGVRVSTLGGAHGRNTDLKERTGVTSKTTISESLVIEKVPASAGDGSVNVDQLGNLTTSSSSAACSGTLSIRVFDKKSGEDSSPILLEARSREHAVNDVVWLGNTSMMKETEIVCSKGSQILWSDWISEKVTVLAGNGNFWAVGCEDGCLLIYTKGGRRAMPTMMMGSAATFIDCDECWTLLLVTRNGSLYLWDLFNRTCLLQHSLTSLVSSSPNSSAKDAGTIKVISVKLSKSGSPLVVLATRHAFLFDMNVKCWLRVADDCFPASNFSSSWSLGSIQSGELAALQVDLRKYLARKPGWTRITDDGVQTRAHLETQLASSLALGSPKEYRQCLLAYVRFLAREADESRLREVCESFLGPPTGMFEETSSDSKNLAWDPFVLGMRKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYDITDANQEQTNRTLLPSSSSPATNPVEGSSLATLQEHTAPPKLDHNTQLEKEQAGFPPALTNEGSADTPMTDQAHQDAQGKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYI4</accession>
    <name>V7BYI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S-protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G010200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the plant self-incompatibility (S1) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW22994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYI4"/>
    <dbReference type="SMR" id="V7BYI4"/>
    <dbReference type="Gramene" id="ESW22994">
        <property type="protein sequence ID" value="ESW22994"/>
        <property type="gene ID" value="PHAVU_004G010200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1418008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060320">
        <property type="term" value="P:rejection of self pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010264">
        <property type="entry name" value="Self-incomp_S1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31232:SF43">
        <property type="entry name" value="S-PROTEIN HOMOLOG 29-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05938">
        <property type="entry name" value="Self-incomp_S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0964">Secreted</keyword>
    <keyword evidence="3 6" id="KW-0713">Self-incompatibility</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="121" mass="14244" checksum="2D595E8E58DC70C5" modified="2014-02-19" version="1" fragment="single">TVSITNRLDMRYLAVQCKDKHNDLGVQQLNVGETFSFRFLPDIFFPETLYFCHFVWLEGDHYFDIYVEKRDSYCIEDSCSWDIFANGPCRIISGHRECYGWNPPVVGERLSLQQSNNTLYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZL4</accession>
    <name>V7BZL4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G040800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZL4"/>
    <dbReference type="Gramene" id="ESW23362">
        <property type="protein sequence ID" value="ESW23362"/>
        <property type="gene ID" value="PHAVU_004G040800g"/>
    </dbReference>
    <dbReference type="OMA" id="ANSGHVM"/>
    <dbReference type="OrthoDB" id="1751704at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="114" mass="12373" checksum="E05DC64F83589F9B" modified="2014-02-19" version="1">MQTLFSHAKLFHLNANCERVFVEDPCSLRVLAAASFNAFILLRISPPSFSSITHLIISTTSTLSTNPFSLSLGLTPTFRPSLTTTAFILCSANSGHVMSGTPCTTLSRVEFHPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7C302</accession>
    <name>V7C302_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G032100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C302"/>
    <dbReference type="Gramene" id="ESW23261">
        <property type="protein sequence ID" value="ESW23261"/>
        <property type="gene ID" value="PHAVU_004G032100g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="100" mass="11176" checksum="DFDA6383373B5D1E" modified="2014-02-19" version="1">MQPTATYLSSVRQAMQPAGASQVKAPKKSKPLRTSSQPQSKEKLFSKTYFLIPLIPHISIKSTFQFPPNTTIFFLNCSTLASNQSNPAFNSCEMWQHTIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3T5</accession>
    <name>V7C3T5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">TPX2 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G058100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TPX2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3T5"/>
    <dbReference type="STRING" id="3885.V7C3T5"/>
    <dbReference type="Gramene" id="ESW23566">
        <property type="protein sequence ID" value="ESW23566"/>
        <property type="gene ID" value="PHAVU_004G058100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUCW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWHIFSA"/>
    <dbReference type="OrthoDB" id="621651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027329">
        <property type="entry name" value="TPX2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044216">
        <property type="entry name" value="WDL7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47067:SF7">
        <property type="entry name" value="TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47067">
        <property type="entry name" value="TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06886">
        <property type="entry name" value="TPX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="4" id="KW-0493">Microtubule</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPX2 C-terminal" evidence="8">
        <location>
            <begin position="460"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="522"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="465"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="522"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="580"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="596"/>
            <end position="614"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW23566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="614" mass="67817" checksum="B7B99F20E97611D2" modified="2014-02-19" version="1">MGDSTCLMQQPFCYASGISNEANENNPIHALGQSISFGRFMSESLAWEKWSSFSHNRYVEEAERYSRPGSVAQKKAFFEAHYRKLAAQKAAALLEQANNGAQNNATEREGEGVINNDNNNDTVTHNSQITRNSEVVVEVEQDAKVLSVTSDENNAMVQLTASVEASVTPESVKVEGTEAEMEEVAVVGNSMEVELQNQLEDLDAQREQNEKLSVTVTPILTPLVKVSISDQEVLASVGKKKPPVSSLKLSKANGTSKLTSTPVKSTAAISFKKENIASPMSIKPANGTSKFNTTPAKPIAATSFRRDNIPTPMSNKPSKSTATPIKSTAAISFRRDNIVTPMNNMPVGLSTADKKRSTPRSVNFTPIRELNRLTASVMRKFESTRVGAGPSKASKDNLTPIRTPTMASKEIQKHFSLTPLTEKKRNKTPLDLSSAHTGGPKWSFLSGENRMKSPIISSPFSLRTEERAARRKKKLEEKFNANEAQKVQLHTKLKEKTETEIIRKLRQSFCFKARPLPDFYKERKTSKSETKKDLLTHSETSKDGRKSTPTMAESKTYFPPNRPVLKTSGTKHLQGKSGRTLTHPLTSTSTTIPTHENASPNIQHGFQNARNYKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C547</accession>
    <name>V7C547_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Vacuolar protein 14 C-terminal Fig4-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G019400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VAC14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C547"/>
    <dbReference type="SMR" id="V7C547"/>
    <dbReference type="STRING" id="3885.V7C547"/>
    <dbReference type="Gramene" id="ESW25244">
        <property type="protein sequence ID" value="ESW25244"/>
        <property type="gene ID" value="PHAVU_003G019400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0212">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EFIIFFN"/>
    <dbReference type="OrthoDB" id="5574975at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010008">
        <property type="term" value="C:endosome membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070772">
        <property type="term" value="C:PAS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006661">
        <property type="term" value="P:phosphatidylinositol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:001082">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000411">
        <property type="entry name" value="protein VAC14 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000169">
        <property type="entry name" value="protein VAC14 homolog isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021133">
        <property type="entry name" value="HEAT_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026825">
        <property type="entry name" value="Vac14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021841">
        <property type="entry name" value="VAC14_Fig4p-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16023:SF0">
        <property type="entry name" value="PROTEIN VAC14 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16023">
        <property type="entry name" value="TAX1 BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24987">
        <property type="entry name" value="HEAT_EF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12755">
        <property type="entry name" value="Vac14_Fab1_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11916">
        <property type="entry name" value="Vac14_Fig4_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50077">
        <property type="entry name" value="HEAT_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="HEAT" evidence="5">
        <location>
            <begin position="90"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="Vacuolar protein 14 C-terminal Fig4-binding" evidence="7">
        <location>
            <begin position="427"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="673"/>
            <end position="721"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="676"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="689"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="711"/>
            <end position="721"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF11916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="721" mass="81310" checksum="99E39A37BA870C9B" modified="2014-02-19" version="1">MAESVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLASSGDHDRIIAVINLLTNEFTYSPQANHRKGGLISLAAATVGLTTEAAQHLELIVPPVLNSFADQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAMTWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELRAIKADPTEAFDVGAILSIARRQLSNEWEATRIEALHWISTLLSRHRSEVLIFLNDIFDTLLKALSDSSDEVVLLVLDVHACIAKDPLHFRQLVVFLVHNFQLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVTPAGKDLYDSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDINVKFLVQLDRLIRLMETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKRMPSGDPYQFHNVPDGFRTIEDGVVAEDGGSSRNKINFAARLQQFQQMQHKHRVLAKTQAKSRNISPSSSKEAQREEEPRRPQSVERNVPPSRSSKRSPGKLQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C862</accession>
    <name>V7C862_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G108700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the glycosyl hydrolase 28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C862"/>
    <dbReference type="SMR" id="V7C862"/>
    <dbReference type="STRING" id="3885.V7C862"/>
    <dbReference type="Gramene" id="ESW26314">
        <property type="protein sequence ID" value="ESW26314"/>
        <property type="gene ID" value="PHAVU_003G108700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTPQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SEWPIVE"/>
    <dbReference type="OrthoDB" id="187139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004650">
        <property type="term" value="F:polygalacturonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051801">
        <property type="entry name" value="GH28_Enzymes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000743">
        <property type="entry name" value="Glyco_hydro_28"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024535">
        <property type="entry name" value="RHGA/B-epi-like_pectate_lyase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31339:SF15">
        <property type="entry name" value="PECTIN LYASE-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31339">
        <property type="entry name" value="PECTIN LYASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00295">
        <property type="entry name" value="Glyco_hydro_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12708">
        <property type="entry name" value="Pect-lyase_RHGA_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="5 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755474" description="Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein" evidence="7">
        <location>
            <begin position="20"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="Rhamnogalacturonase A/B/Epimerase-like pectate lyase" evidence="8">
        <location>
            <begin position="39"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="449" mass="48631" checksum="568BB86C8EC19D23" modified="2014-02-19" version="1">MLVALLLLLSLSNEVRVNGDGGSRQCEHNPAPKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTKSFNLTSHLTLFLEKGAVILGSQDPFHWDVVDPLPSYGRGVEVPGGRYQSLINGYMLDDVVITGNSGIIDGMGLAWWELFNSHSLNYSRPHIIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVHIYNVSISAPPESPYTIGMVPDSSDHICIEDCVIETGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSRSGIEFRTMRGRGGYMKEIVISGIEMVNIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNINLSINSVSSIPWECSNISGFSDSVLPKPCPDLETLSDCLSLLSIRGKAADM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAX2</accession>
    <name>V7CAX2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Auxin-induced protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G124600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimers and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Aux/IAA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAX2"/>
    <dbReference type="SMR" id="V7CAX2"/>
    <dbReference type="STRING" id="3885.V7CAX2"/>
    <dbReference type="Gramene" id="ESW26503">
        <property type="protein sequence ID" value="ESW26503"/>
        <property type="gene ID" value="PHAVU_003G124600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S04C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HMFRTTI"/>
    <dbReference type="OrthoDB" id="652411at2759"/>
    <dbReference type="PhylomeDB" id="V7CAX2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033389">
        <property type="entry name" value="AUX/IAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003311">
        <property type="entry name" value="AUX_IAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053793">
        <property type="entry name" value="PB1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31734:SF94">
        <property type="entry name" value="AUXIN-RESPONSIVE PROTEIN IAA30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02309">
        <property type="entry name" value="AUX_IAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54277">
        <property type="entry name" value="CAD &amp; PB1 domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51745">
        <property type="entry name" value="PB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="7 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0678">Repressor</keyword>
    <keyword evidence="6 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 10" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PB1" evidence="12">
        <location>
            <begin position="102"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="57"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW26503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="192" mass="21464" checksum="C494A06CFD657F48" modified="2014-02-19" version="1">MGTLEQIDVPHTQSSSSSSSSIDSNNHPSRTPPPSSPSSSVCRKRTDLSTDLRLGLSISPSSQSQPPFNSTPREESFNWPPIKSILRSTLVGKQSHLSQRPSLFVKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTTILCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBF2</accession>
    <name>V7CBF2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">J domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G100000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBF2"/>
    <dbReference type="SMR" id="V7CBF2"/>
    <dbReference type="STRING" id="3885.V7CBF2"/>
    <dbReference type="Gramene" id="ESW26210">
        <property type="protein sequence ID" value="ESW26210"/>
        <property type="gene ID" value="PHAVU_003G100000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW26211">
        <property type="protein sequence ID" value="ESW26211"/>
        <property type="gene ID" value="PHAVU_003G100000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS8C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSINRDE"/>
    <dbReference type="OrthoDB" id="10250354at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="entry name" value="DnaJ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024593">
        <property type="entry name" value="DUF3444"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45089:SF18">
        <property type="entry name" value="DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45089">
        <property type="entry name" value="DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11926">
        <property type="entry name" value="DUF3444"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="Chaperone J-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="67"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="153"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="236"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="463"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="736"/>
            <end position="793"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="156"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="238"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="270"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="305"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="334"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="365"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="416"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="427"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="463"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="484"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="748"/>
            <end position="757"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1028" mass="116864" checksum="0525F244CE6D10BF" modified="2014-02-19" version="1">MDCNKEEALRAKDIAEKKMENRDFVGARKIALKAQQLYPDLENIAQMLVVCDVHCCAEKKLFGNEMDWYEILQVEQTAVDALIKKQYKKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRYHFDMKRGVTVNKPATSHFSTTVCRNVRPNFTSSTSQQQQQSRQPMQQQSRQPMQQQQSRQSMQQQQNGVRPTFWTVCPFCSVRYQYYKEILNKTLRCQNCKRPFVAYEVEKQGTPSPATNSTQKAYDQQKGGLNQGSFKVGAGSQGNSHAEKSNTGSSDKKGPASVSEELNGRRKRKQVAESSESSDQQKGVLNHGSFKVGAASQGNSHAEKSNTRSTDKKEPASVSGKLNGKRKRKQVAESSENSDPLSESDSEKDKVAGKGGYSSVENHSISREGQPRRSTRKRHQVSYKENVNNNDDGFSERCGDGEAHGEKSKMNDQNGLAAAHKEVNQKQHLYSERNEETNMSKGKDVVGGSKQVDETSDHSPDLTSKVSNQPNVYVFPDAEFGDYDKDKRKECFAAGQIWAVYDTAEGMPRFYALIRKVLSPGFKLQITWFESHPDWKDEIKWVNEELPVACGKYKLGDTDVTEDHLMFSHLVLCEKVSRTTFKVYPRKGETWALFKNWDIKWYMDVKSHQRYEYEFVEILTDYDEDEGVYVVYLTKLKGFVSLFLQSIKEAKKSFQIPPLELFRFSHRVPSFKMTGEERAGVPTGSYELDPGALPVNFEEKVAHGASGGENTGTSDRSEPLKTSERGSSIPKDNLEGSSLVRENKDSVDDSDDCCAPPAPRSKTIEIPDTQFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGHINKIVTSPDLELHVSWLTCYWLPENTTEWEDKDMGMLISCGRYKVNKTDEFLSIYSTTSSVSHQVHADAVGKNKNYAIFPRKGEVWALYRKWTNKMKCSELKKWEYDIVEVIEETDLFINVVVLEFVSGFSSVYRGKSNEGSSVNLRIPKKELLRFSHQIPAFKLTEEHGKLRDFWELDPGALPIHCYGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBT0</accession>
    <name>V7CBT0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pectinesterase inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G217200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBT0"/>
    <dbReference type="SMR" id="V7CBT0"/>
    <dbReference type="STRING" id="3885.V7CBT0"/>
    <dbReference type="Gramene" id="ESW27614">
        <property type="protein sequence ID" value="ESW27614"/>
        <property type="gene ID" value="PHAVU_003G217200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QXIN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FASKIRC"/>
    <dbReference type="OrthoDB" id="1430376at2759"/>
    <dbReference type="PhylomeDB" id="V7CBT0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046910">
        <property type="term" value="F:pectinesterase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000005">
        <property type="entry name" value="Pectin methylesterase inhibitor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051955">
        <property type="entry name" value="PME_Inhibitor"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080:SF207">
        <property type="entry name" value="PECTINESTERASE INHIBITOR 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31080">
        <property type="entry name" value="PECTINESTERASE INHIBITOR-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756004" description="Pectinesterase inhibitor domain-containing protein" evidence="3">
        <location>
            <begin position="23"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="4">
        <location>
            <begin position="35"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW27614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="208" mass="22898" checksum="EE2478A19C317BAE" modified="2014-02-19" version="1">MATKLLWLSLLILNLVIHMSNTAESATTKLSNPKATTDFIKSSCKETRYPVACVQSLSGYGSKIGQSEEELVTTALAVSVSKTRSCASFLKKMEKVKGMKVKEYNAVRDCIENMDDSVERLNQSVKELGLLGKPKGKDFRWHMSNIQTWVSAAITDQDTCLDGFDGLHLGANFKAAIKPRVLDASQLTSNALALVNRFASKYRTTQTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEI2</accession>
    <name>V7CEI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ZF-HD dimerization-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G190300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEI2"/>
    <dbReference type="STRING" id="3885.V7CEI2"/>
    <dbReference type="Gramene" id="ESW27306">
        <property type="protein sequence ID" value="ESW27306"/>
        <property type="gene ID" value="PHAVU_003G190300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R8XM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="682018at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050793">
        <property type="term" value="P:regulation of developmental process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006456">
        <property type="entry name" value="ZF_HD_homeobox_Cys/His_dimer"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01566">
        <property type="entry name" value="ZF_HD_prot_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31948:SF148">
        <property type="entry name" value="MINI ZINC FINGER PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31948">
        <property type="entry name" value="ZINC-FINGER HOMEODOMAIN PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04770">
        <property type="entry name" value="ZF-HD_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51523">
        <property type="entry name" value="ZF_HD_DIMER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ZF-HD dimerization-type" evidence="4">
        <location>
            <begin position="23"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW27306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="78" mass="8309" checksum="02FB2DFBF88CB724" modified="2014-02-19" version="1">MKKRQVVVKRDYATSSAVGNIRYGECQKNHAANTGGYAVDGCREFMASAGEGTSAALTCAACGCHRNFHKKEVLLGVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGK2</accession>
    <name>V7CGK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G283800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGK2"/>
    <dbReference type="SMR" id="V7CGK2"/>
    <dbReference type="STRING" id="3885.V7CGK2"/>
    <dbReference type="Gramene" id="ESW28405">
        <property type="protein sequence ID" value="ESW28405"/>
        <property type="gene ID" value="PHAVU_003G283800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPTCALE"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="PhylomeDB" id="V7CGK2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000235">
        <property type="entry name" value="Probable calcium-binding protein CML15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000123">
        <property type="entry name" value="probable calcium-binding protein CML18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051111">
        <property type="entry name" value="Ca-binding_regulatory"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46311">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46311:SF5">
        <property type="entry name" value="EF-HAND DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="12"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="48"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="88"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="124"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="163" mass="18251" checksum="DC72CC82DA1BEEA1" modified="2014-02-19" version="1">MSKKHVVKLDEEQIAELREIFRTFDRNNDGSLTQLELSSLLRSLGLKPSADQLEVFIQRADTNNNGLVEFSEFVALVAPELLPAKSPYTDEQLRQLFRMFDRDGNGFITAAELAHSMARLGHALTAEELTGMIKEADTDGDGMINFQEFCHAITSAAFDNSWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHW5</accession>
    <name>V7CHW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein ENHANCED DISEASE RESISTANCE 2 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G091300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHW5"/>
    <dbReference type="STRING" id="3885.V7CHW5"/>
    <dbReference type="Gramene" id="ESW29699">
        <property type="protein sequence ID" value="ESW29699"/>
        <property type="gene ID" value="PHAVU_002G091300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUGE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INHIARY"/>
    <dbReference type="OrthoDB" id="9970435at2759"/>
    <dbReference type="PhylomeDB" id="V7CHW5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009769">
        <property type="entry name" value="EDR2_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31558">
        <property type="entry name" value="CW14 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31558:SF40">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07059">
        <property type="entry name" value="EDR2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein ENHANCED DISEASE RESISTANCE 2 C-terminal" evidence="2">
        <location>
            <begin position="233"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="14"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="492" mass="55143" checksum="DB3D5A1D63644A03" modified="2014-02-19" version="1">MLAGLVKKIASTTMGSCASNPNRKGSGHKRRKHKSGKRRGNIPTALPEMPLKRVSNAGSLVGDFNLSDFVHLDFENGASAPCRRSEVSNMKFHLTQLQYHSQIDANGKYQEEAWFDSVSIIESDSDDDFSSVHGDCFPFTSNALTNGPNTQLLQYETASCYLKIDGANCKNGEKTQETNSKQSTVIMLSVKRSSIDGYDKMTESCSSEKFIYRPRAGLQIPGSTQEKPSPCTWSVIAPSVFKLRGENFFRDKQKCPAPDTCPYIPIGVDLFSCPKKINHIARYLELPSVKENEKLPSLLIVNIQLPTYAASVFLGDADGEGLSLVLYFKLSENFENEISKNFQGMIKRLMDDEMEKVKGYTKESTVPYRERLKILAGVVNPEDLNLYSAEKKLINAYNGKPVLSRPQHEFHKGPNYFEIDLDIHRFSYISRKGLDSLRDRVKLGILDVGLTIQAQKQEELPEEVLCCLRLNKIDFVNHGQIPTLVTLEDNSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK05</accession>
    <name>V7CK05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PUM-HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G052900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK05"/>
    <dbReference type="SMR" id="V7CK05"/>
    <dbReference type="Gramene" id="ESW29216">
        <property type="protein sequence ID" value="ESW29216"/>
        <property type="gene ID" value="PHAVU_002G052900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2049">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HITRILH"/>
    <dbReference type="OrthoDB" id="668540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033133">
        <property type="entry name" value="PUM-HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001313">
        <property type="entry name" value="Pumilio_RNA-bd_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537:SF129">
        <property type="entry name" value="PUMILIO HOMOLOG 15-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12537">
        <property type="entry name" value="RNA BINDING PROTEIN PUMILIO-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00806">
        <property type="entry name" value="PUF"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00025">
        <property type="entry name" value="Pumilio"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50302">
        <property type="entry name" value="PUM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50303">
        <property type="entry name" value="PUM_HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="PUM-HD" evidence="6">
        <location>
            <begin position="57"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="4">
        <location>
            <begin position="154"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="4">
        <location>
            <begin position="231"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="4">
        <location>
            <begin position="303"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="repeat" description="Pumilio" evidence="4">
        <location>
            <begin position="339"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="8"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="417" mass="46775" checksum="63D63999E8F4641D" modified="2014-02-19" version="1" fragment="single">SLCMEKCVSASSSSPSPEIKDGVESAESTPQEGFFSPLIQSHTPWMNPICVDALSCSMATLCFTATPALCFCCHCCGRFLHHHHTSTSLQHAKAQLISVAQMPRQQLGDPEVMEMILGQLKDHFCDLMMDQHCVFSILAIFQASSVRHITRILHLLIQNHHKLKEVCMHNHGSVVIQKLLEHLKSPEQICGAIFAVKRISVRLCKSVNGGHVINHCFKLFSPALTRFIIDEVAKNCVEIATDKSGCSVLQKCLHHAKDNTMKRLIEEIVSHASVLTEHPFGNYAVQYIVKMKIPGVNAEIVLQLEGSYAQLSMNKHASNVVEHLLEFSEEKDAAKIIQELMYSHNFLRIIQDPYGNYVVQRALQNCKGSVYKMLSTVILLNYPHLHTHPYGKRVLTFVQRRKNCEQRNISKQGGSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKA5</accession>
    <name>V7CKA5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Myb-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G168600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKA5"/>
    <dbReference type="STRING" id="3885.V7CKA5"/>
    <dbReference type="Gramene" id="ESW30622">
        <property type="protein sequence ID" value="ESW30622"/>
        <property type="gene ID" value="PHAVU_002G168600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSPI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EFDIPQK"/>
    <dbReference type="OrthoDB" id="1908944at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46872">
        <property type="entry name" value="DNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46872:SF5">
        <property type="entry name" value="MYB-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="348"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="362"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="536" mass="59920" checksum="02408A6FD499DB86" modified="2014-02-19" version="1">MGYKRCLEANELEDLSLNKAKRFESNNELVSLDDFVTPNKSFAKTVITGGENDFYNIQWYDPHEINAAKGSPYAGDKNVQTSGHFSSCSGEDDTGSGATSLSSASSDCFEFDTHQKAFVPLDDDYLAFDCSPRKSVPIGPNHQATLPVWRGKVNKMSELSKYNHDSPPSGLLSAHTVDEDEERLIGTSLLSMHESSSYSSLNECGQGRKECNCMDRGSIRCVRQHVREAREKLMKTLGKEKFVNLGFCDMGEHVAQQWTEEEEDMFHEVVYSNPASLGRNFWKHLSVTFCSRTSREIVSYYFNVFMLQRRASQNRSRFLDIDSDDDECNTRNPGIFGFENSDDSAIESLGDGDVHVENQDNYSEEDDDNSEYGTDDNVLGVTGCDMGNTTEIESEIDQSSLNCKVNSQVEAWSNPDEHVDGCARILNYDIAVQDDSCMSFECDANMVSCHSHGFGDSSSALEARGFKCDQSPRMQGKLDLSSNVMEHDYLLDPCVAKDWYQGYTTCPTPSTDLDFLTTSNLIEEFFGTLDKKAVSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKZ4</accession>
    <name>V7CKZ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF241 domain protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G113200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKZ4"/>
    <dbReference type="SMR" id="V7CKZ4"/>
    <dbReference type="STRING" id="3885.V7CKZ4"/>
    <dbReference type="Gramene" id="ESW29960">
        <property type="protein sequence ID" value="ESW29960"/>
        <property type="gene ID" value="PHAVU_002G113200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUY1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENIQFAH"/>
    <dbReference type="OrthoDB" id="1701699at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048364">
        <property type="term" value="P:root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048367">
        <property type="term" value="P:shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004320">
        <property type="entry name" value="BPS1_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070:SF116">
        <property type="entry name" value="DUF241 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070">
        <property type="entry name" value="OS06G0725500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03087">
        <property type="entry name" value="BPS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="306" mass="34804" checksum="2D79E0D38265C4D2" modified="2014-02-19" version="1">MASTFSPKHSHGYAIRSISLPTRSHPNTVRIEEELNKLKSWEVSSSSEVERIFFGLSGLAELYKCMEDLLKLPLTQQALSHHHNQKWVDELLDCPVRFLDILGETRDAIMLMKGNVRDLQSALRRRKVGDLVIESHLSSYWSLRRNTRKQCTKSLVLLKHTEGSSFGASLPLDLNHHLSAVVRVLREASLITSSIFQSLVSFLSSPILRSKLNNKWTFVSRVMRKGALLQCNNQQENVNELEKVDLALCRMVMDNPAKDFKVENIQCAHKELEAVVVVIEGLEYGLDCLFKHLIDTRVSFLNIVSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMC9</accession>
    <name>V7CMC9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein SPIRAL1-like 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G159400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SPIRAL1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMC9"/>
    <dbReference type="STRING" id="3885.V7CMC9"/>
    <dbReference type="Gramene" id="ESW30518">
        <property type="protein sequence ID" value="ESW30518"/>
        <property type="gene ID" value="PHAVU_002G159400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW30519">
        <property type="protein sequence ID" value="ESW30519"/>
        <property type="gene ID" value="PHAVU_002G159400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5PX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IDIDIAM"/>
    <dbReference type="OrthoDB" id="62622at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010005">
        <property type="term" value="C:cortical microtubule, transverse to long axis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043622">
        <property type="term" value="P:cortical microtubule organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039613">
        <property type="entry name" value="SPR1/2/3/4/5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33403:SF19">
        <property type="entry name" value="PROTEIN SPIRAL1-LIKE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33403">
        <property type="entry name" value="SPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0493">Microtubule</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="68"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="21"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW30518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="10469" checksum="5B0AFFDCC4852ACA" modified="2014-02-19" version="1">MSRGESSGGGQSSLGYLFGSEEQQNQPQPTATVPLPPYGVEIDNTMLPHAVNPPNTQLVVTNNRSQGHHLGNIVTDRPSTKVKSVPGGHSSLGYLFGDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CME7</accession>
    <name>V7CME7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G123000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CME7"/>
    <dbReference type="SMR" id="V7CME7"/>
    <dbReference type="STRING" id="3885.V7CME7"/>
    <dbReference type="Gramene" id="ESW30081">
        <property type="protein sequence ID" value="ESW30081"/>
        <property type="gene ID" value="PHAVU_002G123000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVX6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FCISACV"/>
    <dbReference type="OrthoDB" id="1937632at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36073">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36073:SF1">
        <property type="entry name" value="OS01G0962100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="230"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="79"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="36806" checksum="CF3B458FB28069F8" modified="2014-02-19" version="1">MALIFELLANIILLVTKPFSLLKLAFWFGIKIALTVIYTWTELIGTTISFYLNIVLSVMTWTSGLICLPARVVNVFQRERQLEQKLHGMQIDLENLVRDKKKLQEHFQMAVKERRMMEILLAEIEEEHDMAIAKIEKLEGKLRDQINENLRLKEIRGKGSKDQRISEKFQKISLHDLLTSKDLGEDESKTRSDLLKLLKTGSKSGLISPEMISKDVETMETLELNHHRDIALSQSLFTALMSLMVGVTVWEAEDPCTPLVVALFAVVGMSLKSVVQFLSSIRKKPASDVVALLSFNLFILGTLSYPTLPKVPRMLAPLVLRLMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN66</accession>
    <name>V7CN66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADH-quinone oxidoreductase subunit D domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G146500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I 49 kDa subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN66"/>
    <dbReference type="STRING" id="3885.V7CN66"/>
    <dbReference type="Gramene" id="ESW30356">
        <property type="protein sequence ID" value="ESW30356"/>
        <property type="gene ID" value="PHAVU_002G146500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2870">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1864536at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016651">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.645.10">
        <property type="entry name" value="Cytochrome-c3 Hydrogenase, chain B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001135">
        <property type="entry name" value="NADH_Q_OxRdtase_suD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022885">
        <property type="entry name" value="NDH1_su_D/H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029014">
        <property type="entry name" value="NiFe-Hase_large"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11993:SF10">
        <property type="entry name" value="NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11993">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00346">
        <property type="entry name" value="Complex1_49kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56762">
        <property type="entry name" value="HydB/Nqo4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-1278">Translocase</keyword>
    <feature type="domain" description="NADH-quinone oxidoreductase subunit D" evidence="4">
        <location>
            <begin position="29"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="127" mass="14805" checksum="51CE01B1E4761F26" modified="2014-02-19" version="1">MGESENDSQLVARAIDWYRDKNEKLSLFKPSIKIIQQALEGLPGGPYENLEIRCFDREKEPEWNEFEYRFISKKSSPSFELPKQELYVRIEAPKGELGARPTYYIQNITNKYASHPPSPYNSRCLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNP0</accession>
    <name>V7CNP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Fatty acid hydroxylase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_002G198700g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the sterol desaturase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNP0"/>
    <dbReference type="SMR" id="V7CNP0"/>
    <dbReference type="STRING" id="3885.V7CNP0"/>
    <dbReference type="Gramene" id="ESW30983">
        <property type="protein sequence ID" value="ESW30983"/>
        <property type="gene ID" value="PHAVU_002G198700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0539">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKXFGIS"/>
    <dbReference type="OrthoDB" id="260519at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080132">
        <property type="term" value="F:fatty acid 2-hydroxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014430">
        <property type="entry name" value="Scs7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12863:SF15">
        <property type="entry name" value="FATTY ACID 2-HYDROXYLASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12863">
        <property type="entry name" value="FATTY ACID HYDROXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="14" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="160"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="16">
        <location>
            <begin position="87"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW30983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="239" mass="27471" checksum="5B17884EC6957A29" modified="2014-02-19" version="1">MVAQKFLVDLNKPLVSQVGHLGEDYDEWVHEPIVSKEGPRFFQSDFLELFTRTAWWVIPTVWVPVASWFISNSAKSGLPSQHVAPFVLLGIFVWTLAEYTLHRFLFHIKTKSYWGNTFHYLLHGCHHKHPMDSFRLVFPPVAAAILALPIWNLVKLVCPPSIAPAVFGGILLGYVMYDCTHYYLHHGQPKSEVPKSLKKYHLNHHYRLQNYGFGITSPLWDKVFGTVPPPQSKGEAKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRP6</accession>
    <name>V7CRP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Short-chain dehydrogenase/reductase</fullName>
            <ecNumber evidence="5">1.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G280700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRP6"/>
    <dbReference type="SMR" id="V7CRP6"/>
    <dbReference type="STRING" id="3885.V7CRP6"/>
    <dbReference type="Gramene" id="ESW31940">
        <property type="protein sequence ID" value="ESW31940"/>
        <property type="gene ID" value="PHAVU_002G280700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QKKFRCE"/>
    <dbReference type="OrthoDB" id="1933717at2759"/>
    <dbReference type="PhylomeDB" id="V7CRP6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05324">
        <property type="entry name" value="carb_red_PTCR-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000315">
        <property type="entry name" value="(+)-neomenthol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045313">
        <property type="entry name" value="CBR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490">
        <property type="entry name" value="(+)-NEOMENTHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490:SF99">
        <property type="entry name" value="SHORT-CHAIN DEHYDROGENASE_REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="168"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW31940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="314" mass="35022" checksum="FC714E37B499AA12" modified="2014-02-19" version="1">MGHKEKSKDRKDKRLQEISLLRTIPYADHQRWWSKETIAVVTGGNRGIGFEISRQLADHGVTVILTSRDASVGVESIKVLQEGGLQDVACHQLDILDTSSINEFCDWLKENYGGLDILINNAGVNFNFGSNNSVEHASLVIETNYFGTKRMIEAMIPLMKPSSAGGRIVNVSSRLGRLNGKRNRLENEELREKLSNMEILTEEVIDEMVGTFLKQVEDGSWESGGWPPTFTDYSMSKLAVNAYTRFMANKLSERPDGEKIFINSYCPGWVKTALTGYAGSVSVEDGADSGVWLSLLPDQAITGKFFAERREINF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRU5</accession>
    <name>V7CRU5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SCP2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G022000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRU5"/>
    <dbReference type="SMR" id="V7CRU5"/>
    <dbReference type="STRING" id="3885.V7CRU5"/>
    <dbReference type="Gramene" id="ESW32844">
        <property type="protein sequence ID" value="ESW32844"/>
        <property type="gene ID" value="PHAVU_001G022000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4170">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EQMKQHF"/>
    <dbReference type="OrthoDB" id="3592703at2759"/>
    <dbReference type="PhylomeDB" id="V7CRU5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1050.10:FF:000006">
        <property type="entry name" value="Non-specific lipid-transfer protein-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1050.10">
        <property type="entry name" value="SCP2 sterol-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003033">
        <property type="entry name" value="SCP2_sterol-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036527">
        <property type="entry name" value="SCP2_sterol-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10094:SF25">
        <property type="entry name" value="SCP2 STEROL-BINDING DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10094">
        <property type="entry name" value="STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02036">
        <property type="entry name" value="SCP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55718">
        <property type="entry name" value="SCP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP2" evidence="1">
        <location>
            <begin position="14"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="13676" checksum="2EBF671EC84756BC" modified="2014-02-19" version="1">MADSSNLKSDAIMEQMKQHFATDAGKQLTEKIGLVYQFHIAPKKLGFDEVVYTVNLKKGEVTKGPYEGGKPDASFSFKDEDFVKVALGKMNPQIAFMRGAMKIKGSLSAAQKFTPDIFPKPSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS23</accession>
    <name>V7CS23_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase M1 alanyl aminopeptidase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G2910001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS23"/>
    <dbReference type="STRING" id="3885.V7CS23"/>
    <dbReference type="Gramene" id="ESW32075">
        <property type="protein sequence ID" value="ESW32075"/>
        <property type="gene ID" value="PHAVU_002G2910001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1046">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPRRALK"/>
    <dbReference type="OrthoDB" id="1634996at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.50.10">
        <property type="entry name" value="Peptidase M1, alanyl aminopeptidase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012779">
        <property type="entry name" value="Peptidase_M1_pepN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024601">
        <property type="entry name" value="Peptidase_M1_pepN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037144">
        <property type="entry name" value="Peptidase_M1_pepN_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322:SF1">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17432">
        <property type="entry name" value="DUF3458_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase M1 alanyl aminopeptidase C-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="167" mass="18690" checksum="695A31403D5EFD72" modified="2014-02-19" version="1" fragment="single">YKSATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWKRHEEDRQNLAKAQLERIMSSNGLSENVFEIASKSLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS69</accession>
    <name>V7CS69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Vacuolar-processing enzyme</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G033500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS69"/>
    <dbReference type="SMR" id="V7CS69"/>
    <dbReference type="STRING" id="3885.V7CS69"/>
    <dbReference type="MEROPS" id="C13.002"/>
    <dbReference type="Gramene" id="ESW32979">
        <property type="protein sequence ID" value="ESW32979"/>
        <property type="gene ID" value="PHAVU_001G033500g"/>
    </dbReference>
    <dbReference type="OMA" id="FREPEND"/>
    <dbReference type="OrthoDB" id="192611at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006624">
        <property type="term" value="P:vacuolar protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd21115">
        <property type="entry name" value="legumain_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.132.130:FF:000001">
        <property type="entry name" value="Vacuolar-processing enzyme beta-isozyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1460:FF:000005">
        <property type="entry name" value="Vacuolar-processing enzyme beta-isozyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043577">
        <property type="entry name" value="AE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048501">
        <property type="entry name" value="Legum_prodom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046427">
        <property type="entry name" value="Legumain_prodom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001096">
        <property type="entry name" value="Peptidase_C13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12000">
        <property type="entry name" value="HEMOGLOBINASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12000:SF50">
        <property type="entry name" value="VACUOLAR-PROCESSING ENZYME GAMMA-ISOZYME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20985">
        <property type="entry name" value="Legum_prodom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01650">
        <property type="entry name" value="Peptidase_C13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500139">
        <property type="entry name" value="AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019663">
        <property type="entry name" value="Legumain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00776">
        <property type="entry name" value="HEMOGLOBNASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="6" id="KW-0865">Zymogen</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755721" description="Vacuolar-processing enzyme" evidence="11">
        <location>
            <begin position="25"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="domain" description="Legumain prodomain" evidence="12">
        <location>
            <begin position="371"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00072325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR019663-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF20985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="484" mass="53375" checksum="B478ABD98541FB07" modified="2014-02-19" version="1">MATTTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDSGNGDNVHGTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDDVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDLNEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINVYATTASNADESSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGGLYYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUK9</accession>
    <name>V7CUK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">DNA 5'-3' helicase FANCJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_001G000600g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the DEAD box helicase family. DEAH subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUK9"/>
    <dbReference type="SMR" id="V7CUK9"/>
    <dbReference type="STRING" id="3885.V7CUK9"/>
    <dbReference type="Gramene" id="ESW32586">
        <property type="protein sequence ID" value="ESW32586"/>
        <property type="gene ID" value="PHAVU_001G000600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1132">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="19182at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990918">
        <property type="term" value="P:double-strand break repair involved in meiotic recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18788">
        <property type="entry name" value="SF2_C_XPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000731">
        <property type="entry name" value="Fanconi anemia group J protein homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001207">
        <property type="entry name" value="Fanconi anemia group J protein-like isoform E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006555">
        <property type="entry name" value="ATP-dep_Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045028">
        <property type="entry name" value="DinG/Rad3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014013">
        <property type="entry name" value="Helic_SF1/SF2_ATP-bd_DinG/Rad3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006554">
        <property type="entry name" value="Helicase-like_DEXD_c2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010614">
        <property type="entry name" value="RAD3-like_helicase_DEAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472">
        <property type="entry name" value="DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11472:SF47">
        <property type="entry name" value="FANCONI ANEMIA GROUP J PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06733">
        <property type="entry name" value="DEAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13307">
        <property type="entry name" value="Helicase_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00488">
        <property type="entry name" value="DEXDc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00491">
        <property type="entry name" value="HELICc2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51193">
        <property type="entry name" value="HELICASE_ATP_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-0347">Helicase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0408">Iron</keyword>
    <keyword evidence="12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="14" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-0539">Nucleus</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="18">
        <location>
            <begin position="18"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="108"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="790"/>
            <end position="823"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="923"/>
            <end position="943"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="17">
        <location>
            <begin position="924"/>
            <end position="938"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00082714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW32586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1242" mass="138481" checksum="B2DD26CF33782CF4" modified="2014-02-19" version="1">MVSATNPNPKSKNVYHIGGLEVEFPYQPYGSQFAFMGRVISTLNQAQREGHCHALLESPTGTGKSLSLLCSSLAWQHHYKSKQDHLKPAPEATTDPLAYGGGFVLEDISPSSENPDRTQTEANNKKQKKKEAPTIYYASRTHSQISQVVHELRKTAYRVPMAVLASRKHYCTNKNIIGKENINEECKLLLKDQATGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDIVKVGQLVKGCSYYAARSMSDDAQLVFCPYNYIINPVIRAAMDVDIKGAIVILDEAHNIEDIARDAGSVDIEEDVLDKLQMELQQLCSINAAIYQPLYEMTQGLTSWMEQKKHKLEKRDFHHYVSCWTGDNALGELEEANISKQCFPILLECATKAIKVATDLETNEPHISGTAVITLEGLFSSLTYFFSRNGSHMLDYQLALQRRVRKDTGRATGNWTCAFSLWCLNPAVVFRDVADLSLSIILTSGTLSPMASFTSELGVHFETSLEAPHVIDVDSQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGKSLEEIFKIVPGGCLVFFPSYKLMDKLRNRWSETGQWSRLNAEKPLFVEPRGGSQDDFELALKGYYDSIHHEKRPARGRKRRIKTIDLNHVHAVDSLQNSRKGGAALLGVCRGKVSEGIDFSDDKARVVIIVGIPFPNINDIQVALKKKYNDTYKSVKNLLSGNEWYCHQAFRALNQASGRCIRHKFDYGAIILLDERFQEERNRAFISKWLRRPLKVYDSFDLSLKGLKSFFENVKEHYGINTVHATQSLDINGDDVHKKDQNAGSTRKKNQKLKRSDNGGGKETTMIKNSISSTALTSQDLVKCQPSAQNNSDTYSCKYLPQYFTKTDPRFTIESSAAIMHEETSIVKETPCIDVDYDPGSPHYSKDDNSGSFIIEAPAQIPDHLSSLSMSSTNGSNNSSRAQSSITITPKKNVITNDIPEMESVNSYHHKRMRATPYINLVEEENFIAPCASPPLTRYRKSAVVVREITHGSEYDLERNLKSNSPPLLTNNIPGSCSPIAPPLDQRLLILCSLCKSPLGRPENRLYLTCSLISSSKVHLRSLLKQRLKTCTTDTSKSIPVIMTDSAFVDQRICNRIPKSAPEHSIWCPEDGCVFSTIFCPFCSNVSNLLGVQIMATDSSNVQLLDKILFYFDSLEVKSSEESGNIASGKGDLSPVNDSDEDKITVLNLIEKYSYLPRPGNAEVWKTRKSKQSLRGLSCAANQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW42</accession>
    <name>V7CW42_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Nuclear pore complex protein Nup85</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G074000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Functions as a component of the nuclear pore complex (NPC).</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the nuclear pore complex (NPC).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Nucleus</location>
            <location evidence="1 9">Nuclear pore complex</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the nucleoporin Nup85 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW42"/>
    <dbReference type="STRING" id="3885.V7CW42"/>
    <dbReference type="Gramene" id="ESW33490">
        <property type="protein sequence ID" value="ESW33490"/>
        <property type="gene ID" value="PHAVU_001G074000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2271">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MANCFRA"/>
    <dbReference type="OrthoDB" id="17644at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031965">
        <property type="term" value="C:nuclear membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031080">
        <property type="term" value="C:nuclear pore outer ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017056">
        <property type="term" value="F:structural constituent of nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006406">
        <property type="term" value="P:mRNA export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006606">
        <property type="term" value="P:protein import into nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011502">
        <property type="entry name" value="Nucleoporin_Nup85"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13373">
        <property type="entry name" value="FROUNT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13373:SF21">
        <property type="entry name" value="NUCLEAR PORE COMPLEX PROTEIN NUP85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07575">
        <property type="entry name" value="Nucleopor_Nup85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9" id="KW-0509">mRNA transport</keyword>
    <keyword evidence="7 9" id="KW-0906">Nuclear pore complex</keyword>
    <keyword evidence="8 9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW33490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="527" mass="60092" checksum="F32CD6DD4EA1AC1B" modified="2014-02-19" version="1">MRQITKLDTYSILIVYVHHRLGFCLDLLELRKKEKRGKVIEDDPRYWDLLSSALSVGWLDIVVKMLRLHGSYQLDQLSNRELENGLVETVATLISKMPRLRPESGGKLGECYKSKPDFIKCWEKWRSQITKLDCSPFWIQCDNQQTVEGLRILLQILLGNTDSLCMATCYWIELYISHFLYIRPFTMGIESMYNLAQKCIQLKPQSNTHRLTGLMVGILEENTEVVLAECSREFGPWLVAHAIELLTAGSEQAEVLLHEERYNLGGISIVELHRLVYAQILSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSVQHNNVLLKNIEICRLYELDHISSNIMKIAGVYHWKHGHKGAGVFWLQQAQDSSCLDRIAQQLFDSVGQSISDESFKQWEGMIELLGSESKPAGGLEFLHKYRDFKKSLQKASGGKSTEIARQAVGSLMLLMKNPSTPQRFWLPLLYDSLKLINWKDCPLLGVSETNLLLNKLQDLSLAKLRPNYTEPSLPPDALSSIRLALATNLGRAILDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXC3</accession>
    <name>V7CXC3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G178100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXC3"/>
    <dbReference type="STRING" id="3885.V7CXC3"/>
    <dbReference type="Gramene" id="ESW34754">
        <property type="protein sequence ID" value="ESW34754"/>
        <property type="gene ID" value="PHAVU_001G178100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSYE">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKDAHAD"/>
    <dbReference type="OrthoDB" id="1295726at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056715">
        <property type="entry name" value="DUF7813"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36353">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36353:SF1">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25105">
        <property type="entry name" value="DUF7813"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="224"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="347"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW34754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="469" mass="53350" checksum="D4B129E04A48D646" modified="2014-02-19" version="1">MSDHHPRLHHLRSTSHLLKESLLSFSSNFVTFLFLSLLTLSFRTLVETGTAHVTSFIDRDPSLRALLSRLDLAGNAHHHDHGHDLPSTAANHALRHRRRPFLHLTRVGTLDDDFFSGDDDDDRSLFGSVPKSTANATLLALFPFPSTSAFSDLLADDGVRVSQVIRSGTTFNTQELSSLSSRTPRDDDNSDNEEEKLNENAERKEGVDLQFFVKGIEVGRRDATALFFLVSFLSVAYGWVILVFLVTYSWVLGVVFVSVVNDLLGRFSSVTVLVWDGSRLGLKRLSGFILMRWAVRDALTQLLGLWYFGEIEDQYSFFKLFVRLKLMPFSVMSPWVRGFEREISGFLFTWFLVDTFVAFIFSVDAWVAIVDSRKSGREIVKEGCYLISTMFNQAIQVKCLEAILCGSFVRWGLGRVCGRSFAKMFQSTMEVYFMVTWLLFYFTARCRDADLHGRRFGQRELEGLVEGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYD3</accession>
    <name>V7CYD3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">GATA-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G109500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type IV zinc-finger family. Class A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYD3"/>
    <dbReference type="SMR" id="V7CYD3"/>
    <dbReference type="Gramene" id="ESW33921">
        <property type="protein sequence ID" value="ESW33921"/>
        <property type="gene ID" value="PHAVU_001G109500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPRRCTH"/>
    <dbReference type="OrthoDB" id="2162994at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00202">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.50.10:FF:000018">
        <property type="entry name" value="GATA transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.50.10">
        <property type="entry name" value="Erythroid Transcription Factor GATA-1, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051140">
        <property type="entry name" value="GATA_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000679">
        <property type="entry name" value="Znf_GATA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013088">
        <property type="entry name" value="Znf_NHR/GATA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658:SF143">
        <property type="entry name" value="GATA-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00320">
        <property type="entry name" value="GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00401">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00344">
        <property type="entry name" value="GATA_ZN_FINGER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50114">
        <property type="entry name" value="GATA_ZN_FINGER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0010">Activator</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="GATA-type" evidence="12">
        <location>
            <begin position="192"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW33921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="271" mass="30131" checksum="D068A77F29F1B175" modified="2014-02-19" version="1">MNMNMCQNVSVSSECHQEQVFAPSCSSSLDDLFSAQNTEVDVELEWLSEFVEDCFSSPPSFVLGASGVKTTITSTDPSSGTLKRAQQHESPLQNFAVPGKARSKRKRLSAPRTKDPLSIWSHHLNPQNEALSSDPPLLKQAYWLADSELIMPKPKEEQEVSKVDGEVVEKGVVIIRKESFGDSELEGSNGQQPMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSVYSSISSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1G5</accession>
    <name>V7D1G5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MPN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G201100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Protein degradation; proteasomal ubiquitin-dependent pathway.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NPL4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1G5"/>
    <dbReference type="SMR" id="V7D1G5"/>
    <dbReference type="STRING" id="3885.V7D1G5"/>
    <dbReference type="Gramene" id="ESW35036">
        <property type="protein sequence ID" value="ESW35036"/>
        <property type="gene ID" value="PHAVU_001G201100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2834">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DYTMSTA"/>
    <dbReference type="OrthoDB" id="10251089at2759"/>
    <dbReference type="PhylomeDB" id="V7D1G5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043130">
        <property type="term" value="F:ubiquitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031625">
        <property type="term" value="F:ubiquitin protein ligase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08061">
        <property type="entry name" value="MPN_NPL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17055">
        <property type="entry name" value="Ubl_AtNPL4_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000331">
        <property type="entry name" value="NPL4-like protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016563">
        <property type="entry name" value="Npl4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007717">
        <property type="entry name" value="NPL4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12710">
        <property type="entry name" value="NUCLEAR PROTEIN LOCALIZATION 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12710:SF0">
        <property type="entry name" value="NUCLEAR PROTEIN LOCALIZATION PROTEIN 4 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05021">
        <property type="entry name" value="NPL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="MPN" evidence="6">
        <location>
            <begin position="130"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00060043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00060618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW35036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="412" mass="46545" checksum="7C5311B73B150488" modified="2014-02-19" version="1">MMLRLRSRDGLERVMVENPHATTVLGLKRLIEAQLRIPVQNQTLSTNQNLLLAKSREDLHRFTDMANPDVTLSSLNLAHGSIVFLTYEGERHVAGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGNVSEEGKVEVDFIYEPPQQGSEENLLFFRDPEEEKLVEAIAAGLGMRRVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMSADVHFEAFQISDVCVRLFKEGWFETEIKEDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSTFPVENRNTQMTVKALKNHLDRTKSLPFVKRISDFHLLLVLARVLDVNADVPALTECVQTQTSVPEGYQILIESMASTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1U3</accession>
    <name>V7D1U3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">histidine kinase</fullName>
            <ecNumber evidence="7">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_001G210200g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer; disulfide-linked.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Endoplasmic reticulum membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the ethylene receptor family.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="7"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1U3"/>
    <dbReference type="SMR" id="V7D1U3"/>
    <dbReference type="STRING" id="3885.V7D1U3"/>
    <dbReference type="Gramene" id="ESW35141">
        <property type="protein sequence ID" value="ESW35141"/>
        <property type="gene ID" value="PHAVU_001G210200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0519">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RQEAHRY"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051740">
        <property type="term" value="F:ethylene binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0038199">
        <property type="term" value="F:ethylene receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010105">
        <property type="term" value="P:negative regulation of ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd16922">
        <property type="entry name" value="HATPase_EvgS-ArcB-TorS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.130:FF:000004">
        <property type="entry name" value="Ethylene receptor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.565.10:FF:000030">
        <property type="entry name" value="Ethylene receptor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.40:FF:000026">
        <property type="entry name" value="Ethylene response sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058544">
        <property type="entry name" value="ETR1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24423:SF625">
        <property type="entry name" value="ETHYLENE RESPONSE SENSOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24423">
        <property type="entry name" value="TWO-COMPONENT SENSOR HISTIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25487">
        <property type="entry name" value="ETR1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55781">
        <property type="entry name" value="GAF domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="Homodimeric domain of signal transducing histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="18" id="KW-0186">Copper</keyword>
    <keyword evidence="21" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="15" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="13" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="20 24" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="22" id="KW-0675">Receptor</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 24" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="17 24" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="19" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="24">
        <location>
            <begin position="83"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="25">
        <location>
            <begin position="351"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="23">
        <location>
            <begin position="617"/>
            <end position="636"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW35141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="636" mass="70784" checksum="36565DDE923FBB25" modified="2014-02-19" version="1">MMESCDCIDTQYPPDELLVKYQYISDVLIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSPHSKAVAVVMTIAKVSCAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRNGLNLQLSHTLTYHVQVGSTVQTNNPIVNEVFNSPRAMRIPPTCPLARIRPLVGRYVPPEVVAVRVPLLNLSNFQINDWPDISAKSYAIMVLILPTDSVRKWRDHELELVDVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETELTPEQRVMIETVLKSSNVLATLINDVLDLSRLEDGSLELEMGKLNLHAVLGEIVELIKPIASVKKLPITLILAPDLPAHAIGDEKRLTQTLLNVVGNAVKFTKEGYVSIRASVAKPESLQDWRPPEFYPTSSDGHFYIRVQVKDSGCGIPPQDIPHLFTKFAQSRSGPARPSSGAGLGLAICKRFVNLMGGHIWIESEGPGKGSTATFIVKLGICGNPDPSDHQATNRSQAYSGSGGLARFKPFIKDEDDSGFSTRRNQRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF27</accession>
    <name>V7AF27_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Tetraspanin-3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G072100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the tetraspanin (TM4SF) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF27"/>
    <dbReference type="STRING" id="3885.V7AF27"/>
    <dbReference type="Gramene" id="ESW04167">
        <property type="protein sequence ID" value="ESW04167"/>
        <property type="gene ID" value="PHAVU_011G072100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU76">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ADCTRWS"/>
    <dbReference type="OrthoDB" id="1881997at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044991">
        <property type="entry name" value="TET_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018499">
        <property type="entry name" value="Tetraspanin/Peripherin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32191">
        <property type="entry name" value="TETRASPANIN-8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00335">
        <property type="entry name" value="Tetraspanin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00259">
        <property type="entry name" value="TMFOUR"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="285" mass="31923" checksum="66EE4FBABEA03979" modified="2014-02-19" version="1">MRTSNHLIGVLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFAVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYSLEDYSGWLEERVASDSYWGKIGSCIRDSKVCAKMGRTINEVPETAEMFYLRHLTPIQSGCCKPPTECGYVYQNETVWNLGSGLMGANADCTRWSNDQELLCYACDSCKAGVLASLKKSWRKVSVINIVVMILLVIVYIVAYAAYRNNKRMDNDEPYGEARMTKAQPSAFHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF96</accession>
    <name>V7AF96_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MYND-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G074000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AF96"/>
    <dbReference type="STRING" id="3885.V7AF96"/>
    <dbReference type="Gramene" id="ESW04189">
        <property type="protein sequence ID" value="ESW04189"/>
        <property type="gene ID" value="PHAVU_011G074000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2061">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HQVIRYS"/>
    <dbReference type="OrthoDB" id="443682at2759"/>
    <dbReference type="PhylomeDB" id="V7AF96"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000200">
        <property type="term" value="P:regulation of ribosomal subunit export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007320">
        <property type="entry name" value="PDCD2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12298">
        <property type="entry name" value="PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12298:SF4">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04194">
        <property type="entry name" value="PDCD2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="6">
        <location>
            <begin position="177"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="14"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="407" mass="46224" checksum="9DBEBDD4DA44A215" modified="2014-02-19" version="1">MDTDAIGDIVDKLKAMQNDNVEDQDEYDDVDEDDEEEEHEPITLGFFDKPKNKWSLQRQYFPSKAGGVPAWLDPLNIPSGGSFVCDICGDPLQFLLQVYAPTEKETAFHRMLFVFMCPSMKCLLRDQHEQWKHHPEKPSRSVKVFRCQLPCVNPFYSQECPQNNESHKPAGCGAVLCDWCGTWKGDKVCSSCKQARYCSEKHQVMSWRAGHKIACPQMQISSPVSGSNKSETTLFESQKVGSKNLWPEFEIIIEDESEDNRDTSEENTLSNSLISRTRADDTMNSIFDSFQGDADKKSWASFQECIDNAPEQVLRYYRNTNAKPIWPVSSGRPSNADIPRCSYCSGPMSCEFQILPQLLYYFGVDNEVDSLDWASIVVYACEASCDASLPYKHEFAWVQIYSPSTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHP0</accession>
    <name>V7AHP0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G026200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHP0"/>
    <dbReference type="Gramene" id="ESW03586">
        <property type="protein sequence ID" value="ESW03586"/>
        <property type="gene ID" value="PHAVU_011G026200g"/>
    </dbReference>
    <dbReference type="OMA" id="CTYACYC"/>
    <dbReference type="OrthoDB" id="10567768at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13631" checksum="34C0A0EFFC69C43F" modified="2014-02-19" version="1">MFLRIEIPFDLILLNHKKPSFLCYFLRSSMGYYYYKPRPCDARTPNVVLILALALILLSAPKLFSSQPEEETKYTSPFVALILIVLILLVLSLLGTSRRKVFVKPPFCQCTYACYCNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI96</accession>
    <name>V7AI96_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G141600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI96"/>
    <dbReference type="STRING" id="3885.V7AI96"/>
    <dbReference type="Gramene" id="ESW04980">
        <property type="protein sequence ID" value="ESW04980"/>
        <property type="gene ID" value="PHAVU_011G141600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SBHK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="504708at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755573" evidence="1">
        <location>
            <begin position="21"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="244" mass="26749" checksum="2B5C785B2DF931DD" modified="2014-02-19" version="1">MALVKVALVALVFTFIACNGFVLNEDKCQENDDCKGKLSLCKDSAICVDEVCKCRTTILGKPTKAIRFALDEDKCTENDDCKGKLSLCKDSAICVDEICKCRTTIQGKLTKGFVLDEDKCQQNDDCMGKLSLCKDSTICVDEVCKCRTTIPGKLTKGFALDEDKCQENDDCKGKLSLCKDSVICVDEVCKCRTTILGKPTKGFALDEDKCQKNDDCKGKLSLCKDSAICVDEVCKCRTTILGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIS8</accession>
    <name>V7AIS8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA-5-taurinomethyluridine 2-sulfurtransferase</fullName>
            <ecNumber evidence="3">2.8.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G059600g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the 2-thiolation of uridine at the wobble position (U34) of mitochondrial tRNA(Lys), tRNA(Glu) and tRNA(Gln). Required for the formation of 5-taurinomethyl-2-thiouridine (tm5s2U) of mitochondrial tRNA(Lys), tRNA(Glu), and tRNA(Gln) at the wobble position. ATP is required to activate the C2 atom of the wobble base.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>5-taurinomethyluridine(34) in tRNA + S-sulfanyl-L-cysteinyl-[protein] + AH2 + ATP = 5-taurinomethyl-2-thiouridine(34) in tRNA + L-cysteinyl-[protein] + A + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:47040"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11726"/>
            <dbReference type="Rhea" id="RHEA-COMP:11732"/>
            <dbReference type="Rhea" id="RHEA-COMP:11733"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:87171"/>
            <dbReference type="ChEBI" id="CHEBI:87172"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.8.1.14"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MnmA/TRMU family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.14" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIS8"/>
    <dbReference type="SMR" id="V7AIS8"/>
    <dbReference type="STRING" id="3885.V7AIS8"/>
    <dbReference type="Gramene" id="ESW04011">
        <property type="protein sequence ID" value="ESW04011"/>
        <property type="gene ID" value="PHAVU_011G059600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2805">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="3685at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061708">
        <property type="term" value="F:tRNA-5-taurinomethyluridine 2-sulfurtransferase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01998">
        <property type="entry name" value="MnmA_TRMU-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.280:FF:000001">
        <property type="entry name" value="tRNA-specific 2-thiouridylase MnmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.280">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00144">
        <property type="entry name" value="tRNA_thiouridyl_MnmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004506">
        <property type="entry name" value="MnmA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046885">
        <property type="entry name" value="MnmA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046884">
        <property type="entry name" value="MnmA-like_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023382">
        <property type="entry name" value="MnmA-like_central_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051305">
        <property type="entry name" value="tRNA_2-thiouridylase_MnmA"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001138">
        <property type="entry name" value="PRK00143.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00420">
        <property type="entry name" value="trmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43052">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43052:SF1">
        <property type="entry name" value="TRNA-5-TAURINOMETHYLURIDINE 2-SULFURTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03054">
        <property type="entry name" value="tRNA_Me_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20258">
        <property type="entry name" value="tRNA_Me_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20259">
        <property type="entry name" value="tRNA_Me_trans_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="4" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="tRNA-specific 2-thiouridylase MnmA-like central" evidence="13">
        <location>
            <begin position="283"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-specific 2-thiouridylase MnmA-like C-terminal" evidence="12">
        <location>
            <begin position="355"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF20258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF20259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW04011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="54934" checksum="4D1B573CAFC96C24" modified="2014-02-19" version="1">MLRVAVRWNWRPTASLPLTAFTSQHFHTLNPRPPCRTVRLFCRPSSSAVAHTSLPLSADLHRYLRCSLPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCEQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYANVIHPCADGMNGPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPKDEVRRLATEFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRVFRVGSFKWLSELPPGQTSQLQCKVRHGPGFYDCSLQMEVEGDGQGHSAVVRISEDDQGLAAGQFAAFYEGRTCLGSGVILEFWDEQSFPVCTKALEIARMEDKSILGNPVKIKVKPDSPQEVCDSAELASKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJB4</accession>
    <name>V7AJB4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G172700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJB4"/>
    <dbReference type="STRING" id="3885.V7AJB4"/>
    <dbReference type="Gramene" id="ESW05355">
        <property type="protein sequence ID" value="ESW05355"/>
        <property type="gene ID" value="PHAVU_011G172700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY4K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RMTAKDS"/>
    <dbReference type="OrthoDB" id="1929178at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055281">
        <property type="entry name" value="GIR1-2/SIED1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33177:SF24">
        <property type="entry name" value="FILAMENTOUS HEMAGGLUTININ TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33177">
        <property type="entry name" value="PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="136"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="207" mass="23090" checksum="9012A31044E453F8" modified="2014-02-19" version="1">MITYDFFGGSSSSSLQPQELDLDFHVPSGWKRHLDLKSGKVYIERCNSSVPEHKSQMNQVDPKLQDLNSPPPSTKVSFNPFNGTSLDLKLASHSLPSSNYQSVCTIDKVKSALERVEKKETKKRASPLNSSYFYSPSVSYSSSSSSVRDTQEEEHEHEEKLSSPLAAGCPGCLSYVIIMKHNPKCPMCNHVIPFPLKKKLKIDLNTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKD0</accession>
    <name>V7AKD0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Xyloglucan endotransglucosylase/hydrolase</fullName>
            <ecNumber evidence="12">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_011G107000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 12">Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Secreted</location>
            <location evidence="12">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Secreted</location>
            <location evidence="12">Extracellular space</location>
            <location evidence="12">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="12">Contains at least one intrachain disulfide bond essential for its enzymatic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="12"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKD0"/>
    <dbReference type="STRING" id="3885.V7AKD0"/>
    <dbReference type="Gramene" id="ESW04576">
        <property type="protein sequence ID" value="ESW04576"/>
        <property type="gene ID" value="PHAVU_011G107000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS4T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFYDYCS"/>
    <dbReference type="OrthoDB" id="4781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042546">
        <property type="term" value="P:cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02176">
        <property type="entry name" value="GH16_XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000025">
        <property type="entry name" value="Xyloglucan endotransglucosylase/hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008264">
        <property type="entry name" value="Beta_glucanase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016455">
        <property type="entry name" value="XTH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005604">
        <property type="entry name" value="XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00737">
        <property type="entry name" value="GLHYDRLASE16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 12" id="KW-0052">Apoplast</keyword>
    <keyword evidence="1 12" id="KW-0134">Cell wall</keyword>
    <keyword evidence="12" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8 12" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 12" id="KW-0732">Signal</keyword>
    <keyword evidence="4 12" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148919" description="Xyloglucan endotransglucosylase/hydrolase" evidence="12">
        <location>
            <begin position="29"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="13">
        <location>
            <begin position="23"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <feature type="glycosylation site" description="N-linked (GlcNAc...) asparagine" evidence="11">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00058567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU361120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW04576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="34555" checksum="95219EBF19748B7D" modified="2014-02-19" version="1">MLFCSLLRMFRSLGLFVGLMLVVGVANAVPSTSNFDKLFQPSWAFDHFVHEGDLLKIKLDNYSGAGFGSKSKYMYGKVTIQLKLVEGDSAGTVTAFYMSSEGPNHNEFDFEFLGNTTGEPYSVQTNLYVNGVGNREQRLNLWFDPTKDFHTYSIFWNQRQVVFLVDETPIRVHTNMEHKGIPYPKDQPMGVYSSIWNADDWATQGGRVKTNWSHAPFFATFKNFEINACECPVSVAATDNSKRCSSSVGKKYWWDEPNLAELNLHQSHQLMWVRARHIFYDYCSDTARFPVTPAECVHHRHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL37</accession>
    <name>V7AL37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UspA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G008900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL37"/>
    <dbReference type="SMR" id="V7AL37"/>
    <dbReference type="STRING" id="3885.V7AL37"/>
    <dbReference type="Gramene" id="ESW05975">
        <property type="protein sequence ID" value="ESW05975"/>
        <property type="gene ID" value="PHAVU_010G008900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXH2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YDVQTDI"/>
    <dbReference type="OrthoDB" id="843225at2759"/>
    <dbReference type="PhylomeDB" id="V7AL37"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd23659">
        <property type="entry name" value="USP_At3g01520-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000206">
        <property type="entry name" value="Universal stress protein family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100">
        <property type="entry name" value="IMP2'P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46100:SF2">
        <property type="entry name" value="OS05G0453700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UspA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="18056" checksum="79E75C78159C6EBA" modified="2014-02-19" version="1">MAKDRTIGVAMDFSKSSKNALKWALENLADKGDTIYVIHISPNSLDESRNQLWAKSGSPLIPLQEFREPEIMSKYGVQIDIEVLDTLDTASRQKEVHIVTKIYWGDAREKLLDAIEDLKLDSLVMGSRGLTTIKRIILGSVSNFVMAHASCPVTIVKEPISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALN9</accession>
    <name>V7ALN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TIR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G149200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALN9"/>
    <dbReference type="SMR" id="V7ALN9"/>
    <dbReference type="Gramene" id="ESW05066">
        <property type="protein sequence ID" value="ESW05066"/>
        <property type="gene ID" value="PHAVU_011G149200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXQV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISPRYCE"/>
    <dbReference type="OrthoDB" id="6078042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31008">
        <property type="entry name" value="COP1-INTERACTING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31008:SF16">
        <property type="entry name" value="TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13676">
        <property type="entry name" value="TIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TIR" evidence="1">
        <location>
            <begin position="33"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="203" mass="23347" checksum="C5C0B48A35DA1FA0" modified="2014-02-19" version="1">MHRSLAMNIPSRFLGQQMQTQVDQVLRKRVLVDPCDVFINHRSLDTKTTVAAPIYDHLRRHGFQPFLDNKTLKPGDKLFDKINSTILECKLGLALISPRYCDSYFCLHELALLMECKKKVIPLFVDIKPSQLRVINNRKWTLEDHHRFKFAIEEAKHTVGLTLNSAQGNFSGIVTSASDIIIESLIELEEEEVMMQHSYLPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="23" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANJ7</accession>
    <name>V7ANJ7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G024300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANJ7"/>
    <dbReference type="Gramene" id="ESW06153">
        <property type="protein sequence ID" value="ESW06153"/>
        <property type="gene ID" value="PHAVU_010G024300g"/>
    </dbReference>
    <dbReference type="OMA" id="NCLLRFI"/>
    <dbReference type="OrthoDB" id="1429998at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="25654" checksum="92E76B9488E5B3F5" modified="2014-02-19" version="1">MEDNSWDDMTPLLSSLANLRSVLVQCDTEFQLSKQLKNILVEYFATNTESGISKQHFRSSLIGVGAYHEFFNAVSHNVSKVTVSSESCDVCLPVDNDPYWLGHMGEEHSVSFTVPLDRDLKGMVLCVVYSSTPEIDATECLRNVLIVNYTKCTLHIHNHGTVISFNYIDWQGISSNLGYGDKVEIFLSFGHGLVVENTVVYPICGESKPKENCLLRFIKKIVMLCDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7APH1</accession>
    <name>V7APH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycosyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G053500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APH1"/>
    <dbReference type="Gramene" id="ESW06503">
        <property type="protein sequence ID" value="ESW06503"/>
        <property type="gene ID" value="PHAVU_010G053500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEHATIS"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008194">
        <property type="term" value="F:UDP-glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000054">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48045:SF33">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48045">
        <property type="entry name" value="UDP-GLYCOSYLTRANSFERASE 72B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="451" mass="50625" checksum="8A4152A87CF8B76F" modified="2014-02-19" version="1">MEVKTHIAIVSVPVYSHLRSILEFCKRLVHLHHDIHVTCINPTFGSPCNNTKALFDSLPLTLNQMFLPPVNMEDLPHDIHPAIQVQVIISRSLPLIYDALKALHASSRLAAIISDGLITQVLPFGKELNVLSYSYFPSTAMLLSLCLYSSMLDKRISCEYRDIVEPIEIPGCIPIHGTDLPDPLQDRSGAAYKQFLEGNERFYLADGILVNNFFEMEEGTIRALQQEEEKGIPSVYAIGPFVQEESCKEGSNDIKYLRWLDKQQCNSVLYVSFGSGGTLSQEQIEELAWGLELSGQKFLWVLRPPNKFGIIADIGARHEDPFEFLPDGRLRGCFMSIPRNLLCHCGWNSTLEAVVHGIPLIAWPLFAEQKMNAVLLTDDLKVALRPKVNENGIVEREEITGIIRNLMVGEEGKEIRQRMKNLKDVADDALKDDGSSTVTLTQLALKWKSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQX6</accession>
    <name>V7AQX6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Short-chain dehydrogenase/reductase</fullName>
            <ecNumber evidence="5">1.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G095500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQX6"/>
    <dbReference type="SMR" id="V7AQX6"/>
    <dbReference type="STRING" id="3885.V7AQX6"/>
    <dbReference type="Gramene" id="ESW07018">
        <property type="protein sequence ID" value="ESW07018"/>
        <property type="gene ID" value="PHAVU_010G095500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1208">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMHEFVN"/>
    <dbReference type="OrthoDB" id="1933717at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05324">
        <property type="entry name" value="carb_red_PTCR-like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000312">
        <property type="entry name" value="(+)-neomenthol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045313">
        <property type="entry name" value="CBR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490">
        <property type="entry name" value="(+)-NEOMENTHOL DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43490:SF123">
        <property type="entry name" value="SHORT CHAIN DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="294" mass="31799" checksum="992D7BDA90C9FF51" modified="2014-02-19" version="1">MAEATKGYAVVTGANKGIGFAICKQLASNGVSVVLTARDEKRGVEAVEKLKELGHPVVFHQLDVTDPKSITSLADFIRNQFGKLDILVNNAAIPGAHVNGEAMAAAGIVENAGRADWSKIVTETYELAEAGLKTNYYGVKELTKALIPLLQFSSSPKIVNVSSSMGRLEHMRNGWPKEVFNDVENLTEAKIDDILDEFLKDFKEGSLDTKGWLLAMSAYSVSKASLNAYTRILAKKYPSFCINAVCPGYVKTDINCNTGFLTPDEGAEAAVRLALLPEGSPSGLFFSRSEEKPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARF9</accession>
    <name>V7ARF9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_009G0305001g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARF9"/>
    <dbReference type="Gramene" id="ESW08237">
        <property type="protein sequence ID" value="ESW08237"/>
        <property type="gene ID" value="PHAVU_009G0305001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKHASYP"/>
    <dbReference type="OrthoDB" id="1424633at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015144">
        <property type="term" value="F:carbohydrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF498">
        <property type="entry name" value="MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="10">
        <location>
            <begin position="29"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW08237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="16122" checksum="8B71BE352940FD6D" modified="2014-02-19" version="1" fragment="single">MFKMAGGGFAVDSPNNGFAGKMTLSVIISCIVAASSGLLFGYDIGISGGVTTMVPFLKKFFPEILRKAASSEVNMYCVYDSQVLTLFTSSLYLAGLITSLAASRVTMTLGRRNIILIGGTIFFVGGALNGGAENIPMLILGRILLGFGVGFTNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARN6</accession>
    <name>V7ARN6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G115500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARN6"/>
    <dbReference type="SMR" id="V7ARN6"/>
    <dbReference type="STRING" id="3885.V7ARN6"/>
    <dbReference type="Gramene" id="ESW07268">
        <property type="protein sequence ID" value="ESW07268"/>
        <property type="gene ID" value="PHAVU_010G115500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIPSYWS"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="PhylomeDB" id="V7ARN6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000121">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB8-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47999:SF9">
        <property type="entry name" value="TRANSCRIPTION REPRESSOR MYB5-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="133"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="195"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="143"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="195"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="292" mass="33026" checksum="1B749CD16415F9E8" modified="2014-02-19" version="1">MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLCKKMKTPTAEDATDTANMMLESPEQEPASGNKKKKNGGKKKNKQKKNKEGTNSAEPPKTQVYLPKPIRVKALYLPRTDSNTYTFDSNSSASASTNQEKEESPLTKESNLASEIGNVGESDDFGFFIEDHDLVNASDIECHSYFPSDHGSLQQLYEEYYHLLNMDHTQFIEMNSFGESLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASZ6</accession>
    <name>V7ASZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">ADP,ATP carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_010G152900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Plastid</location>
            <location evidence="8">Chloroplast membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the ADP/ATP translocase tlc family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASZ6"/>
    <dbReference type="STRING" id="3885.V7ASZ6"/>
    <dbReference type="Gramene" id="ESW07718">
        <property type="protein sequence ID" value="ESW07718"/>
        <property type="gene ID" value="PHAVU_010G152900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSRY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLMTAIY"/>
    <dbReference type="OrthoDB" id="2190844at2759"/>
    <dbReference type="PhylomeDB" id="V7ASZ6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005471">
        <property type="term" value="F:ATP:ADP antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004667">
        <property type="entry name" value="ADP_ATP_car_bac_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00769">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31187">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31187:SF13">
        <property type="entry name" value="ADP,ATP CARRIER PROTEIN 1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03219">
        <property type="entry name" value="TLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
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        </location>
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        <location>
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            <end position="160"/>
        </location>
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        <location>
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        </location>
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    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="224"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="262"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="304"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
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            <end position="371"/>
        </location>
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        <location>
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        </location>
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        </location>
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            <end position="471"/>
        </location>
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        </location>
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        </location>
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        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
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        <source>
            <dbReference type="EMBL" id="ESW07718.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="623" mass="67552" checksum="ACC86BF1D8430E73" modified="2014-02-19" version="1">MAAVVQTRGLLSLPTNPKSRASLSRHLNPSHGLKNRFLSLNPKPIYAPSLCAAKFEPLCSKPKNLFICRAEAAAAADGAAQPAFGEAEAEKPKLMGIEITTLKKIIPLGLMFFCILFNYTILRDTKDVLVITAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSSYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTIEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKGMMSIVVGMGFAICFLYWWVNSFVSLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNAYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAATITPAVLLLTGVGFFSLLLFGGPIAPTLASFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLLIVSAWLAAAKSLDTQFTALRKEEELEKEMERAAAVKIPVVAENDGGNGSLATGSPLSPSSGDSSSSPSEASSPRNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATH1</accession>
    <name>V7ATH1_PHAVU</name>
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            <fullName evidence="2">Uncharacterized protein</fullName>
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        <name evidence="2" type="ORF">PHAVU_009G001600g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Lee R."/>
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                <person name="Thareau V."/>
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                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
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            <strain evidence="3">cv. G19833</strain>
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    </dbReference>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW07898.1"/>
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    </evidence>
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    <sequence length="100" mass="11059" checksum="3DF254D786C23591" modified="2014-02-19" version="1">MAIRLASVLSAKHILRRTNIFANHAAATSLDVPKGHFAVYVGEGEKKRFVIPISYLNHPSFQQLLSIAEEEFGFNHPMGALTIPCTQDIFLNITSALHTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
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            <taxon>fabids</taxon>
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            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
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                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
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                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
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                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
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    </dbReference>
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        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
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        <location>
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        </location>
    </feature>
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        <location>
            <begin position="100"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="119"/>
        </location>
    </feature>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="161" mass="17252" checksum="81DFE3769262DB2B" modified="2014-02-19" version="1">MIQNLSPSLVLAFGTQLVYKESPLPFPTMVVRFLVLSLLISGIHAISISEGKGLIQSNGEAQQLLGKLYGISMEEARILKEKVDETENGCKDEVVSTTRIAQGGSSGGGGKKGKTGTGGSADVTRRPRQSSAPSKPHFWVSTFNLCVSMAISVTLFPFHWI</sequence>
</entry>
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    <accession>V7AVT1</accession>
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            <fullName evidence="6">Symplekin</fullName>
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    </gene>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
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            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7AVT1"/>
    <dbReference type="STRING" id="3885.V7AVT1"/>
    <dbReference type="Gramene" id="ESW09669">
        <property type="protein sequence ID" value="ESW09669"/>
        <property type="gene ID" value="PHAVU_009G146300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1895">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LQINKCG"/>
    <dbReference type="OrthoDB" id="331600at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071333">
        <property type="term" value="P:cellular response to glucose stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032460">
        <property type="entry name" value="Symplekin/Pta1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022075">
        <property type="entry name" value="Symplekin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47184">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47184:SF3">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11935">
        <property type="entry name" value="SYMPK_PTA1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12295">
        <property type="entry name" value="Symplekin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Symplekin/Pta1 N-terminal" evidence="2">
        <location>
            <begin position="96"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Symplekin C-terminal" evidence="3">
        <location>
            <begin position="1104"/>
            <end position="1281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="329"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="535"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="329"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="398"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="542"/>
            <end position="556"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW09669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1342" mass="146990" checksum="94D01D3462EE6F2C" modified="2014-02-19" version="1">MAAPTRDQALSLLAAANNHGDLTVKTSSLKQAKDLLLSIDHSLAADLFPYLLELQSSPESLVRKLLIQIIEEIGFKAVEHSPTLISVLLTFLRDSDITVVKQSIVSGTNIFGSVFEELILQFQQNGKVERWLEDTWMSMLKFKDAVFGIALEPGSVGIKLLALKFLEMFVLLFTSDVSDSEKLATKGVRQAVNVLWLVGGHPHPVLDPVVLMSEANRTLGILLNLLQSVGSPPGCLTITVVNCLAAIARKRPQHYDTILLALLEFDPNALTAKGCHVASIQYSLRTALLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMVKNGDRSTRDARISKDDQPSTQSSVSGELSRKRPVPLDNEQMTNGHETISKRIRSGPDSHSTLPAKINDSGQDPNSVNGVSPNVPLLDSEMTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARIGNLPVTRQLSSQVSQSQVIATSVPTNSVQSLSGTGQALLPSTTAAVIGASSLLSDTSNFSNLPADSKRDPRRDPRRLDPRRVVVAPGGATVSITDDTGATKLEFDEPVSSIKPVSLPVVTADDNTPSDLTVKLKNDDMISEGTSVSGPDQVIPKTEIQERPGDIHRIAEADTSFGPSVSSREEDPSMVNLSDDIETIGTDSSSISEFDQFSLDVQVESTLEDTCLELPQLPPYVELSKEQQSMVKNMAVRHIINSYKHLHGTYCQQFWMPLLARLVAQIDDDDEFIMMLQKHILEDHWLKGHELVLHVLYHLHSLMILDSVENASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLKILNDLCYSDVIGHDGKVIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCALHPQDEIRAKAIRLVTNKLFQLSYISGDVEKFATNMLLSAVEHEVSDTGLLQSGPGATEHRAEAEVEGQEISTSQVSESTISEDDSTRVAKPLIQNVPSISFSEAQRLISLFFALCTKKPSLLQIVFNVYGQAPKTVKQAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVLQILTQDSTPSSDLISTVKRLYETKFRDVTILVPLLSSLSKQEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAMHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHSNLRGPLASYASQPTIKSTLSRSILAVLGLANETHVQQHLSTTLHSSDTSSSVHGATLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX36</accession>
    <name>V7AX36_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GH10 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_009G075400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 10 (cellulase F) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX36"/>
    <dbReference type="SMR" id="V7AX36"/>
    <dbReference type="STRING" id="3885.V7AX36"/>
    <dbReference type="Gramene" id="ESW08796">
        <property type="protein sequence ID" value="ESW08796"/>
        <property type="gene ID" value="PHAVU_009G075400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSCW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFWEVEN"/>
    <dbReference type="OrthoDB" id="3055998at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031176">
        <property type="term" value="F:endo-1,4-beta-xylanase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045493">
        <property type="term" value="P:xylan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000104">
        <property type="entry name" value="Endo-1,4-beta-xylanase A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000103">
        <property type="entry name" value="Glycosyl hydrolase family 10 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.260:FF:000146">
        <property type="entry name" value="Glycosyl hydrolase family 10 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.260">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003305">
        <property type="entry name" value="CenC_carb-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044846">
        <property type="entry name" value="GH10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031158">
        <property type="entry name" value="GH10_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001000">
        <property type="entry name" value="GH10_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31490:SF46">
        <property type="entry name" value="ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31490">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02018">
        <property type="entry name" value="CBM_4_9"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00331">
        <property type="entry name" value="Glyco_hydro_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00134">
        <property type="entry name" value="GLHYDRLASE10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00633">
        <property type="entry name" value="Glyco_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="Galactose-binding domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00591">
        <property type="entry name" value="GH10_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51760">
        <property type="entry name" value="GH10_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0858">Xylan degradation</keyword>
    <feature type="domain" description="GH10" evidence="9">
        <location>
            <begin position="390"/>
            <end position="685"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="620"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW08796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="742" mass="83150" checksum="74151612291AAD34" modified="2014-02-19" version="1">MENLPKINEGNHSEKIINKGCESTEDEDIIINPQFDDGLNNWSGRGCKIALHDSMEDGKILPKSGKFFASATDRTQSWNGIQQEITGRVQRKLAYEVTVLVRIFGNNVTTSDVRATLWVQAPDLREQYIGIANVQATDKDWVQMQGKFLLNGSPSKVVVYLEGPPPGTDILVNTLVIKHAAKTPPSTPPDCEIAAFGVNIIENSNLGNGTNGWFPLGNCTLSVQSGSPRIIPPMARDSLGPHESLSGRYLLVTNRTQTWMGPAQMITDKFKLFLTYQVSAWVRIGSGSTGPQNVNVALSVDNQWVNGGQVEIADGRWHEICGSFRIEKQASKVMVYIQGPASGVDLMIAGLQIFAVDRQARFKYLRRQTDKIRKRDITLKFSGLDSIGNLGTLVRVRQIQNDFPIGTCISRSNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNLNYKDADEMLDLCQKNKIDTRGHCIFWEVDGNVQQWIKSLNKTDLMKAVQNRLNDLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYHVEDGCDTRSSPEKYIQHILDLQQQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGIPIWFTELDVSSTNEYVRADDLEVMLRETMAHPAIDGVMLWGFWELFMSRENSHLVDAEGELNEAGKRFLALKQEWLSHSHGYADAQGQFSFRGFSGTYKVEVVTLAEKVSKTFVVDKGDSSLVVSIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYF3</accession>
    <name>V7AYF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Inositol-tetrakisphosphate 1-kinase</fullName>
            <ecNumber evidence="9">2.7.1.134</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G113600g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12452"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57539"/>
            <dbReference type="ChEBI" id="CHEBI:57733"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.134"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9 11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9 11">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 9">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the ITPK1 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.134" evidence="9"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYF3"/>
    <dbReference type="SMR" id="V7AYF3"/>
    <dbReference type="STRING" id="3885.V7AYF3"/>
    <dbReference type="Gramene" id="ESW09266">
        <property type="protein sequence ID" value="ESW09266"/>
        <property type="gene ID" value="PHAVU_009G113600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQS1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHLYNRQ"/>
    <dbReference type="OrthoDB" id="25308at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052726">
        <property type="term" value="F:inositol-1,3,4-trisphosphate 5-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052725">
        <property type="term" value="F:inositol-1,3,4-trisphosphate 6-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047325">
        <property type="term" value="F:inositol-3,4,5,6-tetrakisphosphate 1-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032957">
        <property type="term" value="P:inositol trisphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.470.20:FF:000047">
        <property type="entry name" value="Inositol-tetrakisphosphate 1-kinase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.20">
        <property type="entry name" value="ATP-grasp fold, B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008656">
        <property type="entry name" value="Inositol_tetrakis-P_1-kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040464">
        <property type="entry name" value="InsP(3)kin_ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041429">
        <property type="entry name" value="ITPK1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14217">
        <property type="entry name" value="INOSITOL-TETRAKISPHOSPHATE 1-KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14217:SF39">
        <property type="entry name" value="INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05770">
        <property type="entry name" value="Ins134_P3_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17927">
        <property type="entry name" value="Ins134_P3_kin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038186">
        <property type="entry name" value="ITPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56059">
        <property type="entry name" value="Glutathione synthetase ATP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 9 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 9 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Inositol-tetrakisphosphate 1-kinase N-terminal" evidence="13">
        <location>
            <begin position="43"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp" evidence="12">
        <location>
            <begin position="143"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="210"/>
            <end position="221"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="301"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>1D-myo-inositol 1,3,4-trisphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58414"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR038186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR038186-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR038186-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF05770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW09266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="350" mass="39449" checksum="7E9810376F63366C" modified="2014-02-19" version="1">MRLRENDDGGEKEEVVENDVTLAQNQWCPVVNAGFSSPKRLVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVVEDYRQSHPDVTVLDPPDAIQHLRNRQYMLQAVADMNLSDSYGIVGVPRQLVIKREACAIPELVNQAGLTLPLVAKPLVADGSAKSHELSLAYEQFSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSKDAGIYNFPRVSCAAASADDADLDPTVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ11</accession>
    <name>V7AZ11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_009G218300g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60212"/>
            <dbReference type="Rhea" id="RHEA-COMP:15537"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="14">
            <dbReference type="Rhea" id="RHEA:60213"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6)-methyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60216"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="Rhea" id="RHEA-COMP:15543"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="12">
            <dbReference type="Rhea" id="RHEA:60217"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>N(6)-methyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2</text>
            <dbReference type="Rhea" id="RHEA:60220"/>
            <dbReference type="Rhea" id="RHEA-COMP:15543"/>
            <dbReference type="Rhea" id="RHEA-COMP:15547"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:16842"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="13">
            <dbReference type="Rhea" id="RHEA:60221"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the JARID1 histone demethylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ11"/>
    <dbReference type="SMR" id="V7AZ11"/>
    <dbReference type="STRING" id="3885.V7AZ11"/>
    <dbReference type="Gramene" id="ESW10540">
        <property type="protein sequence ID" value="ESW10540"/>
        <property type="gene ID" value="PHAVU_009G218300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VVHGKLW"/>
    <dbReference type="OrthoDB" id="1678912at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034647">
        <property type="term" value="F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048589">
        <property type="term" value="P:developmental growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051093">
        <property type="term" value="P:negative regulation of developmental process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045814">
        <property type="term" value="P:negative regulation of gene expression, epigenetic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.360:FF:000005">
        <property type="entry name" value="Putative lysine-specific demethylase JMJ16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.650">
        <property type="entry name" value="Cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003889">
        <property type="entry name" value="FYrich_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003888">
        <property type="entry name" value="FYrich_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003347">
        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003349">
        <property type="entry name" value="JmjN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004198">
        <property type="entry name" value="Znf_C5HC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10694:SF105">
        <property type="entry name" value="LYSINE-SPECIFIC DEMETHYLASE JMJ14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05965">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05964">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02373">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02375">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02928">
        <property type="entry name" value="zf-C5HC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00542">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00541">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00558">
        <property type="entry name" value="JmjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00545">
        <property type="entry name" value="JmjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51543">
        <property type="entry name" value="FYRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51542">
        <property type="entry name" value="FYRN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51184">
        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51183">
        <property type="entry name" value="JMJN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="6" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0804">Transcription</keyword>
    <keyword evidence="9" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="JmjN" evidence="16">
        <location>
            <begin position="56"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="JmjC" evidence="17">
        <location>
            <begin position="265"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="129"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="628"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="22"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="15">
        <location>
            <begin position="129"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="15">
        <location>
            <begin position="635"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="667"/>
            <end position="688"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00050619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00050935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00051640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW10540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="20">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1045" mass="117554" checksum="5A32AF24DD0C9478" modified="2014-02-19" version="1">MEQLKLATNSDAKEDNPLGSKPKNSNALESSDSLRNRKVSARWDPVGACRPIIEEAPVFYPTLEEFEDTLSYIAKIRPLAEPHGICRIVPPACWVPPCPLKEKDLWENAEFPTRIQQIDLLQNREPMRKKCRGRKRKRRRLSKTGTCRRKPANAASQAKNASDSEEKFGFQSGSDFTLKDFQHYADYFKECYFGLKDADRDRTVSDSNHQKRWEPSEEEIEGEYWRIVGQPSDEVEVYYGADLETGALGSGFPKASSITTSDSAQYALSGWNLNNFPRLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSQASALENAMRNHLPDLFEEQPNLLNELVTQFSPSILKSEGVPVYRTVQHSGEFVITFPRAYHSGFNCGFNCAEAVNVAPIDWLMHGQNAVELYSLQCRKTSLSHDKLLFGSALEAVRAITELALGNESPKNLKWKSVCGKDGDLTKAVKARIKMEDERLDCLPTNLKLLKMNSDFDLHTERECFSCFYDLHLSAVGCECSPDRYSCLKHANLFCSCGMEKKIVLLRYTRNELTKLLEALEGESHAIKVWANKNCGMVSANVSEVCVDKSNVEKDIYKTNNCEEMDSLSGCERTKDRSNLNTSCSPNSHITSEIVQSESHPVTSSATYDSIDSHNDNNSDKKSDTDKEDKMDQDGYLDLNLDIFSGENENHVLDIADNHHNQGVSVEQKVCCSEAKKEEDSMELCGEGNLSNSFSVLNRDFSSSSRGVHNYCTFDGGKIELDLQTDSGKLHNNLFTKGAIDTADTPMDLTDESCLVRMFSTSVEPVSLGSVVHGKLWCSKQAIYPKGFKSRVLFFSILDPTIICSYISEVIDAGFLGPLFKVTMEEYPSEAFTDISSDNCWESVLKRLHHEIKRRRSLGELELPTLELLKSINGHRMFGFLLPSIIQAIEVQDPCHMCVEYWNHKVAPSGSVVDNFTYGSRSPFGNTNTKIFGINLIKHSFLGDMKPILQRATPDELSTLHKLLSSDARCCEWKLTLMALMDEIRKACQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0Q7</accession>
    <name>V7B0Q7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="1">PPIase</shortName>
            <ecNumber evidence="1">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G211800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="1"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0Q7"/>
    <dbReference type="STRING" id="3885.V7B0Q7"/>
    <dbReference type="Gramene" id="ESW10463">
        <property type="protein sequence ID" value="ESW10463"/>
        <property type="gene ID" value="PHAVU_009G211800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DPNYRNV"/>
    <dbReference type="OrthoDB" id="193499at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.100.10:FF:000037">
        <property type="entry name" value="Peptidyl-prolyl cis-trans isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044178">
        <property type="entry name" value="CYP28-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47875">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47875:SF1">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="2">
        <location>
            <begin position="74"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="31604" checksum="6CC86A21FF3C143F" modified="2014-02-19" version="1">MAYSLPPPPPPPPSLPLPNHFTRRSLLLLSTTTTTSTTLSLPSTPPPTPTVTDRFFMDFSLCPNNFLPDRADTLSPICSDSKLLGRVVLGLFGNLVPRTVSNFKSVCLGSNATSSSYKNTLVHKVFPGQYLLAGRQGRPDKGEVRPPRDLPRNTETVDAKAFALIHSRPGVVSLSLSENDDDDDVKLDPEYRNVEFLITTGPGPCPQLDNKNIVFGTVLEGLDVITAIASIPTYQPSERIRQFNDLAEFFGDGRAQNARNIWNRPLTTVYISDCGELKVTKPSLTPSLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2V8</accession>
    <name>V7B2V8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">W2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G009600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complex (40S.mRNA.Met-tRNA[F].eIF-2.GTP) with the subsequent joining of a 60S ribosomal subunit resulting in the release of eIF-2 and the guanine nucleotide. The subsequent joining of a 60S ribosomal subunit results in the formation of a functional 80S initiation complex (80S.mRNA.Met-tRNA[F]).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-beta/eIF-5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="entry name" value="ARM repeat"/>
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        <property type="entry name" value="Translation initiation factor 2 beta, aIF2beta, N-terminal domain"/>
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        <property type="entry name" value="Zinc-binding domain of translation initiation factor 2 beta"/>
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        <property type="entry name" value="W2"/>
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    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
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            <begin position="284"/>
            <end position="443"/>
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            <begin position="147"/>
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            <begin position="280"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00025032"/>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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        <source>
            <dbReference type="PROSITE" id="PS51363"/>
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        <source>
            <dbReference type="EMBL" id="ESW11193.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
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    <sequence length="443" mass="48827" checksum="67D8744D312B4938" modified="2014-02-19" version="1">MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGSSSAKDGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGVQWLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKKKKAASNQNGGSQNGNSKNYGTVVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B319</accession>
    <name>V7B319_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">BEACH-type PH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G074600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW11970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="STRING" id="3885.V7B319"/>
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        <property type="protein sequence ID" value="ESW11970"/>
        <property type="gene ID" value="PHAVU_008G074600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1787">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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        <property type="component" value="Chromosome 8"/>
    </dbReference>
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        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01201">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1540.10:FF:000001">
        <property type="entry name" value="neurobeachin isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1540.10">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.29.30">
        <property type="entry name" value="Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000409">
        <property type="entry name" value="BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036372">
        <property type="entry name" value="BEACH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050865">
        <property type="entry name" value="BEACH_Domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046851">
        <property type="entry name" value="NBCH_WD40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031570">
        <property type="entry name" value="NBEA/BDCP_DUF4704"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023362">
        <property type="entry name" value="PH-BEACH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011993">
        <property type="entry name" value="PH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743:SF157">
        <property type="entry name" value="BEACH DOMAIN-CONTAINING PROTEIN C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13743">
        <property type="entry name" value="BEIGE/BEACH-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02138">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="DUF4704"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20426">
        <property type="entry name" value="NBCH_WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01026">
        <property type="entry name" value="Beach"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81837">
        <property type="entry name" value="BEACH domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50197">
        <property type="entry name" value="BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51783">
        <property type="entry name" value="PH_BEACH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="domain" description="BEACH-type PH" evidence="6">
        <location>
            <begin position="2077"/>
            <end position="2187"/>
        </location>
    </feature>
    <feature type="domain" description="BEACH" evidence="5">
        <location>
            <begin position="2202"/>
            <end position="2491"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="2645"/>
            <end position="2686"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="76"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1003"/>
            <end position="1022"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="2009"/>
            <end position="2043"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="2687"/>
            <end position="2713"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="2839"/>
            <end position="2860"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="76"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="89"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1013"/>
            <end position="1022"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="2693"/>
            <end position="2707"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="2839"/>
            <end position="2854"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="2954" mass="323608" checksum="BD9F77863E7A28E5" modified="2014-02-19" version="1">MEEMEETKDIKISNELDSDEIVDSGVKQFIESPHQENVISSSSVGVELIDERDNLQEQVIDSVTTAMDEDQFEQVSLKDQDKNNEYEDSNCSPGSDNKQHPFSGNAENSRYSFGSNSMENDSSPVADVHHDNLSYSPGSEEHYGHTSKHFSASINFNSSGYSTVNSPPKPKQKHAKPNVSPELLHLVDSAIMGKPEGMDKLKNIASGVEIFDGGEEMDSVPFLIVDSLLATMGGVESFEEDEDNNPPSVMLNSRAAIVAGELIPWLPYAGDADDLMSPRTRMVRGLLVILRACTRNRAMCSMAGLLEVLLRTAEKIFTVDVGLNGEMRWDGTPLCHCIQYLAGHSLNVSDIYRWFQVITKTLTTMWAPQLTLALEKAISGKESMGPACTFEFDGESSGLLGPGESRWPFINGYAFATWIYIESFADTLNTATVAAAIAAAAAARSGKSSAMSAAAAASALAGEGTAHMPRLFSFLSGDNQGIEAYFHAQFLVVETASGKGKKSSLHFTYAFKPQCWYFVGLEHIGKPGILGKAESEVRLYIDGSLYESRPFEFPRISKPLAFCCIGTNPPPTMAGLQRRRRQCPLFAEMGPVYIFKEPIGPERMACLASRGGDIVPSFGNAAGLPWLATNAYVQSKAEESVLLDAEIGGCLHLLYHPSLLNGRFCPDASPSGASGTLRRPAEVLGQVHVATRMRPVDALWALSYGGPLSLLPLTISNLHENTLEPQQGSPPLSSATTSLAASIFRIISTALQHPRNNEELARGRGPEVLSKILNYLLQTLSSLDVRKHDGVRDEELVAAVVSLCQSQKINHALKVQLFTTLLLDLKIWSLCSYGIQKKLLSSLADMVFTESMVMRDANAIQMLLDGCRRCYWTVPEIDSLNTVSLTGATRPVGEINALVDELLVVVELLIVAASPSLASNDVRCLLGFMVDCPQPNQVARVLHLLYRLVVQPNASRAHTFAEEFLACGGVETLLVLLQREAKAGDNGVLDSCSTNTELQKTKIDGGNEMTKGSQEDEGLKEKSENILQDNDHASLSVDSGNNSDPITPLFASETPSVKNLGGISLSISADSARKNVYNVDKSDGIVVGIIGLLGALVASGHLRIGSWAGPDTTSNLLGVGLHDKGGTMFEDKVSLLLFALQKAFQAAPNRLMTNNVYTSLLAASINASSSEDGLNFYDYGHRFEHSQLLLVLLRSLPFAPRPLQSRALQDLLFLACSHPENRSSLISMEEWPQWILEILISNYEVGPGKLSDSTTIGDGDIEDLIHNFLSIMLEHSMRQKDGWKDIEATIHCAEWLSIIGGSSTGEQRGRREEALPIFKRKLLGGLLDFAARELQVQTQIIAAAAAGVAAGGLSPREAKTEADNAAQLSVALVENAIVILMLVEDHLRVQSKHSSSTRAADASPSPISAEYQINSRPMSLSTIEESLETSDSGAVPLDVLSSMADRSGQIPSSVMERLAAAAAAEPYESVSCAFVSYGSCAKDLADGWKYRSRLWYGVNLSPNPALFEGGGSGWDFWKSALEKDANGKWIELPLVKKSVAMLQALLLDESGLGGGLGIGGGSGTGMGGMSALYQLLDSDQPFLCMLRMVLLSMREDDDGEDHMLMRNTSFEDSGSEGRKPRSALLWSVLSPVLNMPISDSKRQRVLVACCVLYSEVYHAVSRDQKPLRKQYLEAILPPFVGVLRRWRPVLAAIHELATADGLNPLIADDRALAADSLPIEAALAMISPAWAAAFASPPASMAMAMVAAGTSGGESHRPATTSHLKRDTSLMERKQTKLHTFSSFQKPLEATNKTPPLPKDKAAAKAAALAAARDLERFAKIGSGRGLSAVAMATAAQRRNASDMERVKSWNISEAMGVAWMECLHPVDTKSVYGKDFNAFSYKYIAVLVASFALARNMQRSEIDRRAYVDVIGRHRISTGVRAWRKLIHQLIEMKSLFGPSADHLYSLPCVFWKLDLMEGSSRMRRCLRRNYHGSDHLGSAANYEDYFGEKNDQQTPILSAEAISLETVNEDEEPVEIDNLNTRVSDDDKGDNQTRMSESADQAVLASLESGATQHASDEELVRSSSAIAPGYVPSELDERIVLELPSSMVRPLKVIRGTFQVTNRRINFIVDNSETSTTMDGSNSDVEAGKQEKDRSWLMSSLHQIYSRRYLLRRSALELFLVDRSNFFFDFGNGEGRRNAYRAIVQSRPPHLNNIYLATQRPEQLLKRIQLMERWTRWEISNFEYLMQLNTLAGRSYNDITQYPVFPWILSDYSSESLDLSNPSSYRDLSKPVGALNPDRLNRFQERYTNFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIQLQGGKFDHADRMFSDISATWNGVLEDMSDVKELVPELFYQSEVLTNENSIDFGTTQTGGKLDTVKLPAWAENPVDFIHKHRKALESEYVSAHLHEWIDLIFGYKQRGKEAVTANNVFFYTTYEGTVDLDKISDPVQQCAIQDQIAYFGQTPSQLLTVPHLKKMPLAEVLHLQTIFRNPKEVKPYDVPFPERCNLPAAAIHASSDTVVVVDMDAPAAHVVQHKWQPNTPDGQGTPFLFQHRKATLASAGGTIMRMFKAPPTSSVEWQFPQAVAFAVSGIRSQAIVSITCNKEVITGGHADNSIKLISSDGAKTLETAYGHCAPVTCLGLSPDSNYLVTGSRDTTVLLWRIHRALASHTSVMSEHSTGTGTSSSTSNGSSHMLEKDRRRRIEGPIQVLRGHHTEILSCCVNSDIGIVVSCSHSSDVLLHTIRRGRLIRRLDGVEAHIVCLSSEGVVLTWNESQHTLSTFTLNGTPIARAQLSIFCSINCIEISVDGMSALIGINSLENGRPYNNSPKPYNSSPNSSKSGDDFYSETEEILENTGIDVPSPSICFLDMHTLEVFHALKLKEGQDITALALNKDNTNLLVSTLDKQLIIFTDPALSLKVVDQMLKLGWEGDGLQPLIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B332</accession>
    <name>V7B332_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Angiotensin-converting enzyme 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G015900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B332"/>
    <dbReference type="Gramene" id="ESW11273">
        <property type="protein sequence ID" value="ESW11273"/>
        <property type="gene ID" value="PHAVU_008G015900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3ZQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKHANIM"/>
    <dbReference type="OrthoDB" id="509052at2759"/>
    <dbReference type="PhylomeDB" id="V7B332"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006476">
        <property type="entry name" value="CHP01589_pln"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01589">
        <property type="entry name" value="A_thal_3526"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31871">
        <property type="entry name" value="OS02G0137100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31871:SF48">
        <property type="entry name" value="OS05G0462000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09713">
        <property type="entry name" value="A_thal_3526"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW11273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="98" mass="11256" checksum="72B0F6A7C8390D48" modified="2014-02-19" version="1">MGESSNSSASYIHMVHHLIEKCLIFHMSKEECMEALSKHANIKPVITSTVWKELEKENKEFFEEYAKAKSKEDRMSEEETSQMIQKMISDSTKGGSSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3D9</accession>
    <name>V7B3D9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G083100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3D9"/>
    <dbReference type="Gramene" id="ESW12080">
        <property type="protein sequence ID" value="ESW12080"/>
        <property type="gene ID" value="PHAVU_008G083100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDM5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WKISINA"/>
    <dbReference type="OrthoDB" id="1419639at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="188" mass="22453" checksum="4B1CC8497DF7F7FF" modified="2014-02-19" version="1">MQSERQEQQQSWRLHVTAKANNFNFRLRFVAATYKPTWNFSFFRLSILLKLPKFALTFASHPTQPAHRPGFFTTKFMKIVRKLRPRLPRKKESNVPYLKDPLRIGFWVMGILECVARSISKNGQRGIVMLVGYLLLLFWKMKIAKLVNLVTFLGVVGTIFYYLFFNFDFNYSYWEYMGRSWNKVVNLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3E5</accession>
    <name>V7B3E5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_009G254900g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Lipoamide dehydrogenase is a component of the plastidial pyruvate dehydrogenase complex (PDC).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + NAD(+) = N(6)-[(R)-lipoyl]-L-lysyl-[protein] + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="17">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homodimer. Part of the plastidial pyruvate dehydrogenase complex (PDC) containing multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast stroma</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3E5"/>
    <dbReference type="SMR" id="V7B3E5"/>
    <dbReference type="STRING" id="3885.V7B3E5"/>
    <dbReference type="Gramene" id="ESW10976">
        <property type="protein sequence ID" value="ESW10976"/>
        <property type="gene ID" value="PHAVU_009G254900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1335">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSFGTHV"/>
    <dbReference type="OrthoDB" id="361797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045252">
        <property type="term" value="C:oxoglutarate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006103">
        <property type="term" value="P:2-oxoglutarate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046685">
        <property type="term" value="P:response to arsenic-containing substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.390.30:FF:000001">
        <property type="entry name" value="Dihydrolipoyl dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.60:FF:000043">
        <property type="entry name" value="Putative dihydrolipoyl dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050151">
        <property type="entry name" value="Class-I_Pyr_Nuc-Dis_Oxidored"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22912:SF151">
        <property type="entry name" value="DIHYDROLIPOYL DEHYDROGENASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22912">
        <property type="entry name" value="DISULFIDE OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00411">
        <property type="entry name" value="PNDRDTASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="FAD/NAD-linked reductases, dimerisation (C-terminal) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 17" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10 17" id="KW-0520">NAD</keyword>
    <keyword evidence="17" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="20">
        <location>
            <begin position="79"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="domain" description="Pyridine nucleotide-disulphide oxidoreductase dimerisation" evidence="19">
        <location>
            <begin position="430"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="16">
        <location>
            <position position="532"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <begin position="217"/>
            <end position="219"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <begin position="254"/>
            <end position="261"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="350"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="396"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <begin position="402"/>
            <end position="405"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="18">
        <location>
            <begin position="116"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00049187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00059226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00065519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW10976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="562" mass="59472" checksum="5DA2799102E2EBB8" modified="2014-02-19" version="1">MPSSISLSSSYASTVSRPRHSFPLSGGTLVPSTLNFCGLRSKAFTSSSLNHHCHRRRRHSAAVSAALSNNGTAPTFFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELRDDHHLKSLGLQVSGAGYDRQAVADHANNLASKIRGNLTNSLKALGVDILTGFGTILGPQKVKVGSSNKVVTAKDIIVATGSVPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKVTPARDGKPVTIELIDAKTKEQKETLEVDAALIATGRSPFTQGLGLENIDVVTQRGFVPVDERMRVLDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDTGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASAPVKEAVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3P8</accession>
    <name>V7B3P8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G120300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DEFL family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3P8"/>
    <dbReference type="SMR" id="V7B3P8"/>
    <dbReference type="Gramene" id="ESW12522">
        <property type="protein sequence ID" value="ESW12522"/>
        <property type="gene ID" value="PHAVU_008G120300g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1433686at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031640">
        <property type="term" value="P:killing of cells of another organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022618">
        <property type="entry name" value="Defensin-like_20-28"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10868">
        <property type="entry name" value="Defensin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="5" id="KW-0295">Fungicide</keyword>
    <keyword evidence="7" id="KW-0611">Plant defense</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW12522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="75" mass="8691" checksum="81EC7FBF12432AE2" modified="2014-02-19" version="1">MKDTDVKDLGEWMSIKDIEEKDVYCCSDNRVRSCNPRTQDDKHCNSLCLNHPCGKGGRCKVFGHKNPRHFCHCFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B466</accession>
    <name>V7B466_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G128400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B466"/>
    <dbReference type="Gramene" id="ESW12624">
        <property type="protein sequence ID" value="ESW12624"/>
        <property type="gene ID" value="PHAVU_008G128400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1HQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THADHND"/>
    <dbReference type="OrthoDB" id="1711136at2759"/>
    <dbReference type="PhylomeDB" id="V7B466"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16449">
        <property type="entry name" value="RING-HC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46629">
        <property type="entry name" value="OS01G0917900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13920">
        <property type="entry name" value="zf-C3HC4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="3">
        <location>
            <begin position="328"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="112"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="123"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="163"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="208"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="232"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="252"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW12624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="376" mass="41882" checksum="B0F86516FEAC1489" modified="2014-02-19" version="1">MEGRRRVTLHEEMSASDSSRARVLTGLTLDDVLANQKRPSWTPPREPPSKNRTLLDIIREDETNKKDRRSWKAFKDKLRLKRAGSAWISTIHIPTSDVPIPNPNSRIFTQFGRRNSVRFPSLTTSPTDSQTQTQTQTPTPTPTPSDSDMSSNYMAHQVEDLNPATEESSSPVAAAPAIRPQFSRRGSTRFGGDCGENNTAGTLRPQLSIRNTPNLQSEPYKRGRVVTFRDSFDDEDADEEGEKPGEGRALSAREAVAAQEASEAAAQEAEAEEEQAPVMMSLMDLLEETDREMGLEGSRYILSDDEDFDEDADEEDDGDGVGSMEHTCCVCMVRHKTAAFIPCGHTFCRMCSRELMVSRGNCPLCNNFILEILEIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7B506</accession>
    <name>V7B506_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cupin type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G1508001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B506"/>
    <dbReference type="STRING" id="3885.V7B506"/>
    <dbReference type="Gramene" id="ESW12894">
        <property type="protein sequence ID" value="ESW12894"/>
        <property type="gene ID" value="PHAVU_008G1508001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1422629at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754088" description="Cupin type-1 domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="92" mass="10106" checksum="58BC415252507D15" modified="2014-02-19" version="1" fragment="single">MKAVYFLVAILALTSSIASAYDPSPLQDFCVALNDTKNAVFVNGKLCKDPKVVKAEDFFRHVEPGNTSNPLGAQVVGYEARTNWVGLTRHMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6K9</accession>
    <name>V7B6K9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G174200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the WIP C2H2-type zinc-finger protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6K9"/>
    <dbReference type="STRING" id="3885.V7B6K9"/>
    <dbReference type="Gramene" id="ESW13180">
        <property type="protein sequence ID" value="ESW13180"/>
        <property type="gene ID" value="PHAVU_008G174200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIPCYCC"/>
    <dbReference type="OrthoDB" id="6077919at2759"/>
    <dbReference type="PhylomeDB" id="V7B6K9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009813">
        <property type="term" value="P:flavonoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:000523">
        <property type="entry name" value="Zinc finger protein WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.160.60:FF:001230">
        <property type="entry name" value="zinc finger protein WIP2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055187">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043584">
        <property type="entry name" value="WIP1/2/3/4/5/6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059161">
        <property type="entry name" value="Znf-C2H2_STOP1/2_3rd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45878">
        <property type="entry name" value="ZINC FINGER PROTEIN WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45878:SF1">
        <property type="entry name" value="ZINC FINGER PROTEIN WIP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22995">
        <property type="entry name" value="C2CH-3rd_BIRD-IDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23115">
        <property type="entry name" value="zf-C2H2_STOP2_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 10" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="11">
        <location>
            <begin position="87"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW13180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="232" mass="26322" checksum="3541F17BF18351B3" modified="2014-02-19" version="1">MNQNQLQPLPLLSSFLGSSPQEALLQNQNPKAYHGQVEDVTVALHIGLPNNSGGSTNNQGFVNATTHVPSNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDIPCYCCSRGCKNNIDHPRAKPLKDFRTLQTHFKRKHGAKPFTCRKCAKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIRAFGFGHTPFTSSSDAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7B829</accession>
    <name>V7B829_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G128500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B829"/>
    <dbReference type="STRING" id="3885.V7B829"/>
    <dbReference type="Gramene" id="ESW12626">
        <property type="protein sequence ID" value="ESW12626"/>
        <property type="gene ID" value="PHAVU_008G128500g"/>
    </dbReference>
    <dbReference type="OMA" id="IFNSHAY"/>
    <dbReference type="OrthoDB" id="1434964at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="CDD" id="cd22160">
        <property type="entry name" value="F-box_AtFBL13-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053781">
        <property type="entry name" value="F-box_AtFBL13-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006566">
        <property type="entry name" value="FBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050232">
        <property type="entry name" value="FBL13/AtMIF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900:SF34">
        <property type="entry name" value="EMB|CAB62440.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900">
        <property type="entry name" value="F-BOX/RNI SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08387">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00579">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50181">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="2"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="376" mass="43502" checksum="7BDBDBE2169D91ED" modified="2014-02-19" version="1">MPDRISKLPDAVLSHILSFLPTTAAVATTVLSKRWNTLWRSCTTLSFDDFQYIFNSHAYCRFVQSVYAAILLRDWHHTVQSFNLRCRSSLCDPINMRVWINTVLQRGVQHLCLANYFYLPTAVLTCKTLVVLKLDQFLVKAFSTVDFPLLKIMHLRNLEFSDHRHFAEFVSAAPNLEDLEAVDLTFRCRAVEGSFKNLPKLVRATISKMDVPLAVVTDVRFLRLNWMDAEVKEFVPNRGFNVFRNLIQIEFGYKNYTKDWVEVLEMLKFFPKLQVLTVDKMSVDSLPQGEEGEDWTYPQDVPLSSISLHLRVCSFNNYKGSKGELRFAEYIMGNALHLQIMSISSNIHAKQEQKFKMIQELSLCTRRSASCKLIFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7B867</accession>
    <name>V7B867_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Xyloglucan endotransglucosylase/hydrolase</fullName>
            <ecNumber evidence="12">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G129900g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 12">Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Secreted</location>
            <location evidence="12">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Secreted</location>
            <location evidence="12">Extracellular space</location>
            <location evidence="12">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="12">Contains at least one intrachain disulfide bond essential for its enzymatic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="12"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B867"/>
    <dbReference type="SMR" id="V7B867"/>
    <dbReference type="STRING" id="3885.V7B867"/>
    <dbReference type="Gramene" id="ESW12641">
        <property type="protein sequence ID" value="ESW12641"/>
        <property type="gene ID" value="PHAVU_008G129900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FDQNYEV"/>
    <dbReference type="OrthoDB" id="4781at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042546">
        <property type="term" value="P:cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02176">
        <property type="entry name" value="GH16_XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000025">
        <property type="entry name" value="Xyloglucan endotransglucosylase/hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008264">
        <property type="entry name" value="Beta_glucanase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016455">
        <property type="entry name" value="XTH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005604">
        <property type="entry name" value="XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00737">
        <property type="entry name" value="GLHYDRLASE16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 12" id="KW-0052">Apoplast</keyword>
    <keyword evidence="1 12" id="KW-0134">Cell wall</keyword>
    <keyword evidence="12" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8 12" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 12" id="KW-0732">Signal</keyword>
    <keyword evidence="4 12" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148965" description="Xyloglucan endotransglucosylase/hydrolase" evidence="12">
        <location>
            <begin position="21"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="13">
        <location>
            <begin position="2"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00058567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR608264-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU361120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW12641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="283" mass="32739" checksum="1801E5BCBDEA70F3" modified="2014-02-19" version="1">MGSQSFIFLLLLVVHVAVQGSMDTETSFDQNYEVVWGDDHVVSLNQGKEVQLTMDNCSGSGFGSKMAYGSGLFQMRIKVPNRNSAGIVTAFYLSSKGGRHDELDFEFLGNRKGKPYRLQTNVFVDGQGNREQRIRLWFDPTAHFHTYRILWNQHQIVFFVDNVPIRVYKNKTNIGVGYPSKGMQIEATLWDAESWATNGGKTKTDWSYAPFRASFQGFDVSGCQVLTSNAKNCSSDKYWWNRQKFWQLDPVRQSEYERIKHKYMTYDYCTDRKRYPEIPLECL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7B873</accession>
    <name>V7B873_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G246900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B873"/>
    <dbReference type="SMR" id="V7B873"/>
    <dbReference type="STRING" id="3885.V7B873"/>
    <dbReference type="Gramene" id="ESW14029">
        <property type="protein sequence ID" value="ESW14029"/>
        <property type="gene ID" value="PHAVU_008G246900g"/>
    </dbReference>
    <dbReference type="OMA" id="NIACQSS"/>
    <dbReference type="OrthoDB" id="1433401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW14029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="14659" checksum="74E47AD70185A3B7" modified="2014-02-19" version="1">MLNLVSFICLQLIRDYANLAYQSGGISLVVNKCIESYQFEYAVRFFTLALRCCKDLPDERPKMAEVARELEYICSMLLEPDSKRVEYVTNDSSSTIFSSQHSSSTIKTPFISGDVLGSDLVSGSVPTIKPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8F1</accession>
    <name>V7B8F1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_008G170200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8F1"/>
    <dbReference type="SMR" id="V7B8F1"/>
    <dbReference type="STRING" id="3885.V7B8F1"/>
    <dbReference type="Gramene" id="ESW13128">
        <property type="protein sequence ID" value="ESW13128"/>
        <property type="gene ID" value="PHAVU_008G170200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SETHFYG"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="PhylomeDB" id="V7B8F1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000012">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000014">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF339">
        <property type="entry name" value="PEPTIDASE A1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00792">
        <property type="entry name" value="PEPSIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 13" id="KW-0645">Protease</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 16" id="KW-0732">Signal</keyword>
    <keyword evidence="15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="16">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754234" description="Peptidase A1 domain-containing protein" evidence="16">
        <location>
            <begin position="19"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="511"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="17">
        <location>
            <begin position="105"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="461"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="461"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW13128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="532" mass="58448" checksum="F70CCD773D3B449C" modified="2014-02-19" version="1">MFMAIGLLLWLLLAKGLALEGSVGVTFSSRLVHRFSEEAKVHLASRGNGSVLQSWPKRNSSEYFRLLLRNDVTRQRMRLGSQYETLYPSEGGQTFSFGDALYWLHYAWIDIGTPNVSFLVALDAGSDMLWVPCDCIECASLSAGNYNVLDRNLNQYRPSLSNTSRHLPCGHKLCGQQSFCKGSKDPCPYSVQYASYNTTSSGFLFEDKLHLASDERHALQNSVQASIILGCGSKQTGVYLQGASPDGVLGLGPGNISVPSLLAKAGLTRNSFSICLGENESGRIIFGDQGHATQHSTPFLPINGEFTAYMVGAESFCVGSLCLKETRFQLLIDSGSSFTYLPNEVYQKVVMEFDKQVNAARIILPHTWDYCYNASSQELINIPPLKLAFSRNQTLLFQNPIYTGPASQEQDYTLFCLPITPTDEDYAIIGQNYLIGYRMVFDRENLRFGWSRWNCQDRASLTSPSNGGSPNPLPANQQQSVPNAHAVPPAIAAGHASPKPSAATAGLTCRHSLVSLLLIYVTFAFGYVVKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8P4</accession>
    <name>V7B8P4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Autophagy protein 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G241000g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Required for autophagy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Conjugated to ATG12.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Conjugated with ATG12.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the ATG5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8P4"/>
    <dbReference type="SMR" id="V7B8P4"/>
    <dbReference type="STRING" id="3885.V7B8P4"/>
    <dbReference type="Gramene" id="ESW13960">
        <property type="protein sequence ID" value="ESW13960"/>
        <property type="gene ID" value="PHAVU_008G241000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2976">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FPLKWYI"/>
    <dbReference type="OrthoDB" id="272162at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034274">
        <property type="term" value="C:Atg12-Atg5-Atg16 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005776">
        <property type="term" value="C:autophagosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044233">
        <property type="term" value="C:mitochondria-associated endoplasmic reticulum membrane contact site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061908">
        <property type="term" value="C:phagophore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034045">
        <property type="term" value="C:phagophore assembly site membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019776">
        <property type="term" value="F:Atg8-family ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000422">
        <property type="term" value="P:autophagy of mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006995">
        <property type="term" value="P:cellular response to nitrogen starvation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034727">
        <property type="term" value="P:piecemeal microautophagy of the nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.246.190:FF:000002">
        <property type="entry name" value="Autophagy protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.620:FF:000002">
        <property type="entry name" value="Autophagy protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000370">
        <property type="entry name" value="Autophagy protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.190">
        <property type="entry name" value="Autophagy protein Apg5, helix rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007239">
        <property type="entry name" value="Atg5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048940">
        <property type="entry name" value="ATG5_HBR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042526">
        <property type="entry name" value="Atg5_HR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048939">
        <property type="entry name" value="ATG5_UblA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042527">
        <property type="entry name" value="Atg5_UblA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048318">
        <property type="entry name" value="ATG5_UblB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13040">
        <property type="entry name" value="AUTOPHAGY PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13040:SF2">
        <property type="entry name" value="AUTOPHAGY PROTEIN 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20637">
        <property type="entry name" value="ATG5_HBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20638">
        <property type="entry name" value="ATG5_UblA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04106">
        <property type="entry name" value="ATG5_UblB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0072">Autophagy</keyword>
    <keyword evidence="5 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 11" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0813">Transport</keyword>
    <keyword evidence="7 11" id="KW-0832">Ubl conjugation</keyword>
    <feature type="domain" description="Autophagy protein ATG5 UblA" evidence="15">
        <location>
            <begin position="8"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="Autophagy protein ATG5 alpha-helical bundle region" evidence="14">
        <location>
            <begin position="115"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Autophagy protein ATG5 UblB" evidence="13">
        <location>
            <begin position="207"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00063412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF20637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF20638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW13960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="39238" checksum="62D0B368F0F1B5D7" modified="2014-02-19" version="1">MSSAQKQVWEGAIPLQIHLHESEVTTLPPPPPALVLAPRIGYLPLLISLVKPHFSSTLPPGLDAVWFDYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPSNVLLPCEGEDSVKWSFINSLKEAAYVINGNSKNVMNMSQPDQVELWSSVLNGNLEIYRRVASKLKLGTSEDEYTENVSSVLIKSPQSTGDADVTGQVKTGRIPVRLYLWTVNEEFDDFEDAPQIDNWDKVSYINRPVELHKEDGKYFSLNDAVKRILPEFFPENSFVIEGNTNINQSGEEGERSSDPGSSCNAAEIAEIKFVRIQGIEPVLDIPFSWVVNNFVNPEYFLHMCVCLKVNANAVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9U9</accession>
    <name>V7B9U9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G179300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9U9"/>
    <dbReference type="SMR" id="V7B9U9"/>
    <dbReference type="Gramene" id="ESW13236">
        <property type="protein sequence ID" value="ESW13236"/>
        <property type="gene ID" value="PHAVU_008G179300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MRYLTCN"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46146:SF23">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46146">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="50"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW13236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="45399" checksum="6B7D2A147A7D8E61" modified="2014-02-19" version="1">MLYLTCNADTAIAICRPHSLKKNKKPISPTQAHTLPLFAYSDILTATNAFSADTFLGKGSHGSVYKAVLQGGAFIAAVKKTKPSNEIEILSHVKSRRLVNLIGLCNDQTNCNINKLIVVEYMPNGSLHDLLHSPKTVGTPGWTARVRFAVHVAKAVRLLHSSEPPVIHRDIKSSNVLIDEKWKARLGDFGLAFRGHVADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSLLDWAMPLVCRGEFREICDPRIGAPPDMAAFRRMMVLAARCVRSTAERRPTIAEVVECLTAARKNFEAPVMWLRMTGRVVKARGYPFPDWDRSEESVRRVLGGSRNSKRNGKVSSVLGVECGSGPAKHAVRCRSVGSGFLGEMKIKSVLERYPNQEFGSAGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD39</accession>
    <name>V7BD39_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">TF-B3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G019500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD39"/>
    <dbReference type="STRING" id="3885.V7BD39"/>
    <dbReference type="Gramene" id="ESW14813">
        <property type="protein sequence ID" value="ESW14813"/>
        <property type="gene ID" value="PHAVU_007G019500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S27N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGMENIT"/>
    <dbReference type="OrthoDB" id="1431437at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10017">
        <property type="entry name" value="B3_DNA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.330.10">
        <property type="entry name" value="DNA-binding pseudobarrel domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003340">
        <property type="entry name" value="B3_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015300">
        <property type="entry name" value="DNA-bd_pseudobarrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044837">
        <property type="entry name" value="REM16-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31391:SF64">
        <property type="entry name" value="B3 DOMAIN-CONTAINING PROTEIN OS06G0112300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31391">
        <property type="entry name" value="B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02362">
        <property type="entry name" value="B3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01019">
        <property type="entry name" value="B3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101936">
        <property type="entry name" value="DNA-binding pseudobarrel domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50863">
        <property type="entry name" value="B3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TF-B3" evidence="7">
        <location>
            <begin position="88"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="TF-B3" evidence="7">
        <location>
            <begin position="247"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="189"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="40"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="57"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="197"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW14813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="38090" checksum="23F42B5EE26163B2" modified="2014-02-19" version="1" fragment="single">NGSSFRQCKRVRFSVPSSPSTKKEKIHPRKNPNSYPTQDVETKYAESERTTVDERGRRRNRRCSRSKVKTESGTALERAKSFISENPFFIRVMQRSHIIRKFLTMPADFITVEERKENHRVSVWISEDKTWDMNVNVYRSKKEVSLGSGWANFVKDNNLKKGNVCVFEKIKNPGLSFRVVIYRDAQESSPSNFSANESKETRPQKSSADRGSDGVPKNVFYDSGFRRYNNEISENHFALSVLKTVCIPEQFIRNHMMQNAAKVGLRVGNRTWPVKLEHYPENQCHKLCYSGWSKFMRECKVNVGDVCNFELVDKDTFVFQVRVARCID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BG22</accession>
    <name>V7BG22_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G164100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BG22"/>
    <dbReference type="Gramene" id="ESW16529">
        <property type="protein sequence ID" value="ESW16529"/>
        <property type="gene ID" value="PHAVU_007G164100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16530">
        <property type="protein sequence ID" value="ESW16530"/>
        <property type="gene ID" value="PHAVU_007G164100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS8H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PYDPHMT"/>
    <dbReference type="OrthoDB" id="294702at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45763:SF8">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45763">
        <property type="entry name" value="HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="211"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="518" mass="59294" checksum="9E35737088168FE6" modified="2014-02-19" version="1">MAEVRGRDTWTEELASLMEDSGVRYGGDPNASSAASFEVRRSVYAPQSESVESGESLKEQALGFVMAWCEILLELGRGFRDILRQNLMNEDSYVVRKFGGPCSKVSKRLRFLNDFLPEDRDPVHAWSVVLFVFILALAAISVDPSREAGAPVMKVRKHPPSASRVQLPDGRFMAYHEQGVSSETARFSLVAPHSFLSSRLAGLPGVKTSLLEEYGIRLITYDLPGFGESDPHPNRNLNSSAMDVLHLVNAVNVTDKFWLMCHSSGCIHAWAFLRYIPERIAGAAMLAPMVNPYDPHMTKEETKRTWEKWLPRRKMMYSLARRFPKLLTFFYRKSFLPEQHDEIDKLLSFSTGKKDKLVIEEPEFEEFWQRDVEESVRQGNIRPFIEEVVLQVSNWGFDLKELHVQKKCQARGILLWLKSMYSQADCELAGFLGLTHIWQGLDDRVVPPSMMEYIERVLPEAVIHKLPNEAHFSYFYFCDQCHRQIFSTLFGTPQGPVERQEETAFEEAKEVEVLQIPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGX1</accession>
    <name>V7BGX1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">GATA transcription factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G095300g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the type IV zinc-finger family. Class A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGX1"/>
    <dbReference type="SMR" id="V7BGX1"/>
    <dbReference type="STRING" id="3885.V7BGX1"/>
    <dbReference type="Gramene" id="ESW15706">
        <property type="protein sequence ID" value="ESW15706"/>
        <property type="gene ID" value="PHAVU_007G095300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPAPDCN"/>
    <dbReference type="OrthoDB" id="2162994at2759"/>
    <dbReference type="PhylomeDB" id="V7BGX1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030154">
        <property type="term" value="P:cell differentiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00202">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.50.10:FF:000018">
        <property type="entry name" value="GATA transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.50.10">
        <property type="entry name" value="Erythroid Transcription Factor GATA-1, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051140">
        <property type="entry name" value="GATA_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016679">
        <property type="entry name" value="TF_GATA_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000679">
        <property type="entry name" value="Znf_GATA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013088">
        <property type="entry name" value="Znf_NHR/GATA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45658:SF51">
        <property type="entry name" value="GATA TRANSCRIPTION FACTOR 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00320">
        <property type="entry name" value="GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016992">
        <property type="entry name" value="TF_GATA_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00401">
        <property type="entry name" value="ZnF_GATA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00344">
        <property type="entry name" value="GATA_ZN_FINGER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50114">
        <property type="entry name" value="GATA_ZN_FINGER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0010">Activator</keyword>
    <keyword evidence="7 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 11" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="GATA-type" evidence="14">
        <location>
            <begin position="254"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="164"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR016992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW15706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="354" mass="37743" checksum="7C279EA72F126494" modified="2014-02-19" version="1">MVGPNFMDEIDCGSFFDHIDDLLDFPVEDVDGGAPTLPSVAAAAAGNCNSLASIWPAGSDSFPGSDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMKKVDEPSCTTTKEDSVHNQFHTSSPVSVLESSSSCSGGKTVPAPPRSPEVYIPVPCGRARSKRPRPATFNPRPAMNLISPASSFVGENMQANVISSKASSDSENFAESQLVAKMPKQGCGEMKKKKKVKVTLGAGPGDSNNQNGLQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRFKSGRLYPEYRPAASPTFCPSVHSNSHKKVLEMRCRGIDKSGFAMNAAASPELIPNTNSSLTLEYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH23</accession>
    <name>V7BH23_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_007G135000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH23"/>
    <dbReference type="SMR" id="V7BH23"/>
    <dbReference type="STRING" id="3885.V7BH23"/>
    <dbReference type="Gramene" id="ESW16173">
        <property type="protein sequence ID" value="ESW16173"/>
        <property type="gene ID" value="PHAVU_007G135000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVCNVMI"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051240">
        <property type="entry name" value="Mito_RNA-Proc/Resp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47933:SF10">
        <property type="entry name" value="OS03G0162900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47933">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="11"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="148"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="183"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="282"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="317"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="352"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="387"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="490"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="560"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="595"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="630"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="733"/>
            <end position="767"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="33"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="66"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW16173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="823" mass="93461" checksum="DBF93E1614CDB0F3" modified="2014-02-19" version="1">MLLKLQLLYIHTPLLSNANAVLLLEKPEQVTPTSKKQRLPLHNGTGTVKPEIKLKKRGPVQNSEEGVPRKSKLEKSHTKCSTKSVSYGGCIPAILEALDAVIDVDEALGPWEDKLNNKERSIILKEQLRWDRALEIFEWFNQKGHELNVIHYNIMLKSLGRARQWGRVESLWNEMNARGIAATSSTYGTLIDVYSKGGRREEAHFWLDMMLENGVEPDEVTMVIVVQLYKKAGEFHKAEEFFKKWSSGKPLRSKRKPLRSNDEVVDTRELDERVACANVSFSSHTYNTLIDTYGKAGQLKEASETFMEMLKRGVAPTTVTFNTMIHICGNHGQLEEVSSLVQKMEELRCSPNTRTYNILISLYAKNNDIGMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMVHEAEELVKEMDERGLEVDQYTQSALTRMYIEAGMLDRSLLWFLRFHLTGNMTSECYASNIDAYGEHGHTLEAEKVFILCQERKNVGVLEYNVMIKAYGVGKCYEKACQLFDSMEKHGIVADRCSYTCLIQILVTADQPHIAKTYLKKMQEAGLVSDCIPYCAVISSFVKLGLLEMAHDLYREMIKHGVQPDVIVYGILINAFSDVGRVKEAISYVDEMNKAGLPGNTVIYNSLIKLYAKVDNLEKAEEAYKLLKLSEESPTVYSSNCMIDLYVKRSMVDQANNIFETLRENGAANEFTFAMMLCLYKRIEMFDEAIQIAKQIRKLGHLTDLSYNNVLNLYAIAGRPREAMETFKEMLRGSVPVDNCSFRSLGNLLLRYGVSRQSVGKLEVLAKKGASNGLQAWMLALSSVLEVDDYDHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHK3</accession>
    <name>V7BHK3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Solute carrier family 40 member</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G201800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May be involved in iron transport and iron homeostasis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHK3"/>
    <dbReference type="STRING" id="3885.V7BHK3"/>
    <dbReference type="Gramene" id="ESW17000">
        <property type="protein sequence ID" value="ESW17000"/>
        <property type="gene ID" value="PHAVU_007G201800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WTGSISQ"/>
    <dbReference type="OrthoDB" id="648861at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009941">
        <property type="term" value="C:chloroplast envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005381">
        <property type="term" value="F:iron ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:intracellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009716">
        <property type="entry name" value="Ferroportin-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11660">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 40 MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11660:SF53">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 40 MEMBER 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06963">
        <property type="entry name" value="FPN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="234"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="311"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="391"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="424"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="449"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="482"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="519"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="547"/>
            <end position="570"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="583" mass="62838" checksum="2B6791716D956497" modified="2014-02-19" version="1">MAIATASLSFHFRKFPIPHTPSFSIRHRLPPGPGFNLCYPRASHRFLCLGSKCSLTDTDVHLDHVTADEDEGQGRGVVEPLCPVPFVKLKTDILETESLNLLSEATFVDTLLTTLPVLSEEEQHALSATPAHPVGLHAFYASCIAANVVEQLWNFAWPSAIALIHPSLLPVAVMSFFTKVTIIVSGPLVGQVMDHFPRMYAYNCLTVVQATAQLLSAAMIIHAHSVRHTSLSSLLLRPWFFVLVSAGAIERLCGVALGVANERDWVVLLAGVNRPIALAQANAVLNRIDLLCEIAGALLFGFLLSKFHPVICLKVASGLMMGLLPVTIIFTYLTNKLSTGVLDRPNPSQTCCRTLNEDSGTDANSIVFKGLEAIKLGWKEYLGQPVLPASLAWVLLYFNIVLTPGSLLTAFLTQRGLHPSIIGGFSGMCAFMGVAATFVSSTLVEQFGILKAGAVGLVFQAVLLSIAVAVYWSGSISHQSPLLTFLFLIILSRLGHMSYDVVGAQILQIGIPSSKANLIGTTEIAVASLAESIMLGVAIIANDPSHFGCLALLSLLSVLGAAWMFCRWLLNPTDEQKNLFSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIA3</accession>
    <name>V7BIA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Zinc finger A20 and AN1 domain-containing stress-associated protein 8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G256400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be involved in environmental stress response.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIA3"/>
    <dbReference type="SMR" id="V7BIA3"/>
    <dbReference type="STRING" id="3885.V7BIA3"/>
    <dbReference type="Gramene" id="ESW17638">
        <property type="protein sequence ID" value="ESW17638"/>
        <property type="gene ID" value="PHAVU_007G256400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17639">
        <property type="protein sequence ID" value="ESW17639"/>
        <property type="gene ID" value="PHAVU_007G256400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3173">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NAIAKAX"/>
    <dbReference type="OrthoDB" id="428577at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1110.10:FF:000001">
        <property type="entry name" value="Zinc finger AN1-type containing 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1110.10">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035896">
        <property type="entry name" value="AN1-like_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050652">
        <property type="entry name" value="AN1_A20_ZnFinger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002653">
        <property type="entry name" value="Znf_A20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000058">
        <property type="entry name" value="Znf_AN1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10634">
        <property type="entry name" value="AN1-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10634:SF151">
        <property type="entry name" value="ZINC FINGER A20 AND AN1 DOMAIN STRESS-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01754">
        <property type="entry name" value="zf-A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01428">
        <property type="entry name" value="zf-AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00259">
        <property type="entry name" value="ZnF_A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00154">
        <property type="entry name" value="ZnF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118310">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51036">
        <property type="entry name" value="ZF_A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51039">
        <property type="entry name" value="ZF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="A20-type" evidence="6">
        <location>
            <begin position="12"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="AN1-type" evidence="7">
        <location>
            <begin position="107"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="172" mass="18345" checksum="908106E69A461044" modified="2014-02-19" version="1">MESHDETGCQAPERPILCTNNCGFFGRAATMNMCSKCYKDTLLKQEQDKLAAASVENIVNGGSGCSGKQAVTAGSVDVQVGNVEMKTVSAEISGDSSSGQNLEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYQTVGREAIAKANPAIKADKLDKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIH2</accession>
    <name>V7BIH2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BING4 C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G144800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIH2"/>
    <dbReference type="SMR" id="V7BIH2"/>
    <dbReference type="STRING" id="3885.V7BIH2"/>
    <dbReference type="Gramene" id="ESW16296">
        <property type="protein sequence ID" value="ESW16296"/>
        <property type="gene ID" value="PHAVU_007G144800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1272">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EFLPYHW"/>
    <dbReference type="OrthoDB" id="10251154at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030686">
        <property type="term" value="C:90S preribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000462">
        <property type="term" value="P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:000378">
        <property type="entry name" value="U3 small nucleolar RNA-associated protein 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012952">
        <property type="entry name" value="BING4_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040315">
        <property type="entry name" value="WDR46/Utp7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14085:SF3">
        <property type="entry name" value="WD REPEAT-CONTAINING PROTEIN 46"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14085">
        <property type="entry name" value="WD-REPEAT PROTEIN BING4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08149">
        <property type="entry name" value="BING4CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01033">
        <property type="entry name" value="BING4CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3 6" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="6">
        <location>
            <begin position="276"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="BING4 C-terminal" evidence="8">
        <location>
            <begin position="355"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="465"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="9"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="466"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="485"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW16296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="533" mass="60006" checksum="A60BF48F2D1F3B39" modified="2014-02-19" version="1">MGDIEENDALPKNKPSTEKDVSDELELRMKKYLRGESANLEVLKDKKLKGQLAAKEQLYGKSAQAAAKAEKWLMPSEGGYLEAEGLEKTWRIKQETIAHEVDISGSRKQYDIILPELGPYTLDFTSSGRYMAVGGRKGHIGIVDMINLSLIRELQVRETVRDVVFLHNELFFAAAQKRYPYIYNREGTELHCLKEHGPVLRLQFLKNHFLLATINKFGQLRYQDVTMGSMVGNFRTGVGRTNVMQVNPFNGVVSLGHSAGTVTMWKPTSSAPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKVKLWDLRKYEVLQTLPGHANTLDFSQKGLLSCGNGSLIQVLRDVSGTQNYSRYMTHSMVKGYQVEKLVFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRTLLDKLPPETIMLDPSKIGTVKPKGKRPTKKEKEAEIEAAVEATKGKKLKKKTKGRNKPGKMIQKKQDAIARVKRPYMEQKIQEEENVSRKKQKTSVELPKSLQRFARKKASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJH4</accession>
    <name>V7BJH4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Molybdopterin synthase catalytic subunit</fullName>
            <ecNumber evidence="4">2.8.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Molybdenum cofactor synthesis protein 2 large subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Molybdenum cofactor synthesis protein 2B</fullName>
            <shortName evidence="4">MOCS2B</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_006G016500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal-Gly-aminoethanethioate + cyclic pyranopterin phosphate + H2O = molybdopterin + 2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal Gly-Gly + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:26333"/>
            <dbReference type="Rhea" id="RHEA-COMP:12202"/>
            <dbReference type="Rhea" id="RHEA-COMP:19907"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58698"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:90778"/>
            <dbReference type="ChEBI" id="CHEBI:232372"/>
            <dbReference type="EC" id="2.8.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Heterotetramer; composed of 2 small (MOCS2A) and 2 large (MOCS2B) subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MoaE family. MOCS2B subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.12" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJH4"/>
    <dbReference type="SMR" id="V7BJH4"/>
    <dbReference type="STRING" id="3885.V7BJH4"/>
    <dbReference type="Gramene" id="ESW18144">
        <property type="protein sequence ID" value="ESW18144"/>
        <property type="gene ID" value="PHAVU_006G016500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3307">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HERKSCC"/>
    <dbReference type="OrthoDB" id="5531344at2759"/>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990140">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030366">
        <property type="term" value="F:molybdopterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00756">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1170.40:FF:000002">
        <property type="entry name" value="Molybdopterin synthase catalytic subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.40">
        <property type="entry name" value="Molybdopterin biosynthesis MoaE subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03052">
        <property type="entry name" value="MOC2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036563">
        <property type="entry name" value="MoaE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028888">
        <property type="entry name" value="MOCS2B_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003448">
        <property type="entry name" value="Mopterin_biosynth_MoaE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23404">
        <property type="entry name" value="MOLYBDOPTERIN SYNTHASE RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02391">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54690">
        <property type="entry name" value="Molybdopterin synthase subunit MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="108"/>
            <end position="109"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="131"/>
            <end position="133"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW18144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="190" mass="21023" checksum="B45928E73FA04B68" modified="2014-02-19" version="1">MAAEDDKNLIEILENLNPVDVAKYMNFVSAPQAGAIATFAGTTRDTFEGKTVLELRYEAYVPMAIRCINMICSSARASWNLHSIAVAHRIGTVPVGETSVFIAVSSVHRADALEACRFFIDEIKAKVPIWKKEVYSNGEVWKENSEFLERRSELGNKDAGCCGKKVEIKEQTKKACCGTKVRVDDQGSQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJQ9</accession>
    <name>V7BJQ9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G226300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine-cytosine permease (2.A.39) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJQ9"/>
    <dbReference type="STRING" id="3885.V7BJQ9"/>
    <dbReference type="Gramene" id="ESW17280">
        <property type="protein sequence ID" value="ESW17280"/>
        <property type="gene ID" value="PHAVU_007G226300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2466">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GWNWRAV"/>
    <dbReference type="OrthoDB" id="2018619at2759"/>
    <dbReference type="PhylomeDB" id="V7BJQ9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11485">
        <property type="entry name" value="SLC-NCS1sbd_YbbW-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.4160.10:FF:000001">
        <property type="entry name" value="Uracil permease, putative"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4160.10">
        <property type="entry name" value="Hydantoin permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001248">
        <property type="entry name" value="Pur-cyt_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045225">
        <property type="entry name" value="Uracil/uridine/allantoin_perm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30618">
        <property type="entry name" value="NCS1 FAMILY PURINE/PYRIMIDINE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30618:SF0">
        <property type="entry name" value="PURINE-URACIL PERMEASE NCS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02133">
        <property type="entry name" value="Transp_cyt_pur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="230"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="272"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="343"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="382"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="424"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="464"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="487"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="534"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="574"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="614" mass="66868" checksum="91C39DF916EA9A2E" modified="2014-02-19" version="1">MKKKRRNKEVGFWHYSFPTTHHRSPSHHCIILQQQPCPHSHNTTKNMVVSKCLSFTFHAHPTSPFLAPVPPSKTPTFSSSSTHNFLSSKLKKNLLSPYSYSSVKLLPMKCSNSSNSLSLPDLEFEYDPTLTNEDLKPTAASERTFSGFEIASLWVGLVVGVPSYYLAGSLVDLGMAWWQGIATVVAANMILLVPLVLTGHAGTRYGISFPVLVRSSFGIHGAHIPTLLRALVGCGWYGIESWIGGEAIFLLLPKSMKEASLSQPLPWLGTSPLEFACFLVFWAAQLGFVWSGIDGIRKLEKYSAPILVALTSCLLIWSCVRAGGIGHMLSLSSKLSASEFWSVFFPSLTANISFWATVAINIPDFTRYAKSQKDQIIGQIGLPIFMGAFTFVGLAVTSSTKVIFGQVISDPIQLLGQIGGLTTRIIAIFGISLAIITTNIAANVVAPANALVNLSPKWFTFRRGALLTALLGIAFQPWRLLQSSESFVYTWLVGYSALLGPIAGIVLADYYIIQKTNLNVNDLYSKSPYGAYRYSGGFNVAAILALVIGVLPVVPGFLQKIGIATSVPNTFVVIYNNAWFISFFSAGFFYLVLSNLRGKPGKSAARDPLLPTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKB7</accession>
    <name>V7BKB7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G242900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKB7"/>
    <dbReference type="SMR" id="V7BKB7"/>
    <dbReference type="STRING" id="3885.V7BKB7"/>
    <dbReference type="Gramene" id="ESW17478">
        <property type="protein sequence ID" value="ESW17478"/>
        <property type="gene ID" value="PHAVU_007G242900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FPQWGAY"/>
    <dbReference type="OrthoDB" id="47007at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd05233">
        <property type="entry name" value="SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44375">
        <property type="entry name" value="BETA-KETOACYL-ACP REDUCTASE-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44375:SF2">
        <property type="entry name" value="BETA-KETOACYL-ACP REDUCTASE-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="286" mass="30643" checksum="A53C8E95BC472526" modified="2014-02-19" version="1">MSPQLSDHLEPWRTLAGKVVMVTGASAGLGRDFCLDLARAGCRVVLAARRVDRLRSLCDEINGMAPPAALADGGGSLRAVAVELDIAADGPVVDSYVQKAWDAFGHVDALINNAGIRGTVKSPLELSEEEWNHSFRTNLTGTWLVSKSVCKRMRDAQRKGSIINIASIAGLNRGQLPGSAAYSSSKAGVNILTKVMALELGAHKIRVNSISPGLFKSEITEKLMEKDWLNKVAMKTVPLRRYGTADPALTSLARYLIHDSSEYVTGNNFIVDAGATLPGLPIYSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKE5</accession>
    <name>V7BKE5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G043200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKE5"/>
    <dbReference type="SMR" id="V7BKE5"/>
    <dbReference type="STRING" id="3885.V7BKE5"/>
    <dbReference type="Gramene" id="ESW18464">
        <property type="protein sequence ID" value="ESW18464"/>
        <property type="gene ID" value="PHAVU_006G043200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1502">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICPALNT"/>
    <dbReference type="OrthoDB" id="2735536at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="115" mass="12716" checksum="B27BCC78DC16B16B" modified="2014-02-19" version="1">MRVEKAAWRIANEKGLKLTTICPALNTGPQFCHRNPTATIAYLKVYVTKLAEAHASVFKAMNNNASGKYIHFDKVIDSQIGVENLAKEIGVPKEKICGEALKSSVQRFELSVQII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKE7</accession>
    <name>V7BKE7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">MADS-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_007G205500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKE7"/>
    <dbReference type="STRING" id="3885.V7BKE7"/>
    <dbReference type="Gramene" id="ESW17041">
        <property type="protein sequence ID" value="ESW17041"/>
        <property type="gene ID" value="PHAVU_007G205500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKENWEN"/>
    <dbReference type="OrthoDB" id="779403at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045944">
        <property type="term" value="P:positive regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00266">
        <property type="entry name" value="MADS_SRF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1810.10:FF:000024">
        <property type="entry name" value="Agamous-like MADS-box protein AGL80"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1810.10">
        <property type="entry name" value="Transcription factor, MADS-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033897">
        <property type="entry name" value="SRF-like_MADS-box"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002100">
        <property type="entry name" value="TF_MADSbox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036879">
        <property type="entry name" value="TF_MADSbox_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945">
        <property type="entry name" value="MADS BOX PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11945:SF425">
        <property type="entry name" value="MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00319">
        <property type="entry name" value="SRF-TF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00404">
        <property type="entry name" value="MADSDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00432">
        <property type="entry name" value="MADS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55455">
        <property type="entry name" value="SRF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50066">
        <property type="entry name" value="MADS_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="MADS-box" evidence="7">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="129"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW17041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="157" mass="18270" checksum="38F396EA450AF3B8" modified="2014-02-19" version="1">MSRKKLKLAFISNDMARKTTYKRRKKGIMKKVDELATLCGISACAVISNPFDSETEVWPNPEGVNKVMERFKNASVLNKSRNVNHESFMMQRIVKAQNELKMQREENYEKEITLSMFQFMQGQNLPSTVEEIKEIHKMIEKNIKEIENKLAALHCES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKI3</accession>
    <name>V7BKI3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ABC1 atypical kinase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G208100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. ADCK protein kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKI3"/>
    <dbReference type="SMR" id="V7BKI3"/>
    <dbReference type="STRING" id="3885.V7BKI3"/>
    <dbReference type="Gramene" id="ESW17076">
        <property type="protein sequence ID" value="ESW17076"/>
        <property type="gene ID" value="PHAVU_007G208100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1234">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEYYVPR"/>
    <dbReference type="OrthoDB" id="201153at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015996">
        <property type="term" value="P:chlorophyll catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010224">
        <property type="term" value="P:response to UV-B"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd13970">
        <property type="entry name" value="ABC1_ADCK3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034646">
        <property type="entry name" value="ADCK3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051409">
        <property type="entry name" value="Atypical_kinase_ADCK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43851:SF3">
        <property type="entry name" value="COENZYME Q8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC1 atypical kinase-like" evidence="6">
        <location>
            <begin position="256"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="82"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="85"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="132"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="612" mass="66691" checksum="716A02331C5AB4C6" modified="2014-02-19" version="1">MASSFRDLTRLFNGLSLIAHEFANCSLPATTDNFQTLIKKTLLSATDLTGLTKGKLRQFPNSPPSANPTEHTASSSVVFFTHANPSQSDSTPTTTTPTVTNDDAVAHSPSDAYNRQASDADVCAAEEEKSEVLTTAETVNQGASGEVAPSPPSRKRRPRERKVPATPFSRALGFAGLGAGLAWGTLQESAKRLAFGTPISQGKQSALSPFLSEKNAERLALALCRMRGAALKIGQMLSIQDESLVPAPILAALEIVRQGADVMPRSQLNQVLDDELGPGWSSKLISFDYEPIAAASIGQVHGAVMKDGMQVAMKIQYPGVADSIDSDIENVKLLLNYTNLIPEGLYLDRAIKVAKEELSRECDYRLEAANQKRFRDLLTGIDGFYVPIVVDDISSRRVLTTELVYGITIDKVASLDQETRNHIGKKLLELTLMELFVFRFMQTDPNWGNFLFDEATKTINLIDFGAARDYPKVFVDDYLRMVLACANGDSDGVIEMSRRLGFLTGMESDVMLDAHVQAGFIVGLPFSRPGGFDFRSNNITQSISHLGATMLKHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLEVYKHHKFGDVNEILSSGSVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLM3</accession>
    <name>V7BLM3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="27">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="27" type="ORF">PHAVU_006G079100g</name>
    </gene>
    <organism evidence="27 28">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="28" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="28">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="23">Involved in the biosynthesis of the cyanogenic glucosides linamarin and lotaustralin and of the nitirle glucosides rhodiocyanoside A and D. Can use L-isoleucine &gt; L-valine as substrate, but not L-leucine, L-phenylalanine or L-tyrosine. Catalyzes multi-step reactions starting with two successive N-hydroxylations using L-isoleucine and, to a lower extent, L-valine as substrates leading to the formation of N,N-dihydroxy-L-valine and N,N-dihydroxy-L-isoleucine, respectively; following spontaneous reactions lead to the production of (E)-2-methylpropanal oxime and (1E,2S)-2-methylbutanal oxime, respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="20">
            <text>L-isoleucine + 2 reduced [NADPH--hemoprotein reductase] + 2 O2 = (1E,2S)-2-methylbutanal oxime + 2 oxidized [NADPH--hemoprotein reductase] + CO2 + 3 H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:28602"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:134628"/>
            <dbReference type="EC" id="1.14.14.39"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="22">
            <text>L-isoleucine + reduced [NADPH--hemoprotein reductase] + O2 = N-hydroxy-L-isoleucine + oxidized [NADPH--hemoprotein reductase] + H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:30479"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61131"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="21">
            <text>L-valine + 2 reduced [NADPH--hemoprotein reductase] + 2 O2 = (E)-2-methylpropanal oxime + 2 oxidized [NADPH--hemoprotein reductase] + CO2 + 3 H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:28606"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61143"/>
            <dbReference type="EC" id="1.14.14.38"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-valine + reduced [NADPH--hemoprotein reductase] + O2 = N-hydroxy-L-valine + oxidized [NADPH--hemoprotein reductase] + H2O + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:30491"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61140"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>N-hydroxy-L-isoleucine + reduced [NADPH--hemoprotein reductase] + O2 = N,N-dihydroxy-L-isoleucine + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30483"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61131"/>
            <dbReference type="ChEBI" id="CHEBI:61133"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>N-hydroxy-L-valine + reduced [NADPH--hemoprotein reductase] + O2 = N,N-dihydroxy-L-valine + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:30495"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:61140"/>
            <dbReference type="ChEBI" id="CHEBI:61142"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 24">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Secondary metabolite biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Microsome membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 25">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLM3"/>
    <dbReference type="Gramene" id="ESW18884">
        <property type="protein sequence ID" value="ESW18884"/>
        <property type="gene ID" value="PHAVU_006G079100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWKLAGG"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102001">
        <property type="term" value="F:isoleucine N-monooxygenase (oxime forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102002">
        <property type="term" value="F:valine N-monooxygenase (oxime forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019756">
        <property type="term" value="P:cyanogenic glycoside biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd20658">
        <property type="entry name" value="CYP79"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000037">
        <property type="entry name" value="Cytochrome P450 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944:SF19">
        <property type="entry name" value="CYTOCHROME P450 77A4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47944">
        <property type="entry name" value="CYTOCHROME P450 98A9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="16" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5 24 25" id="KW-0349">Heme</keyword>
    <keyword evidence="13 24 25" id="KW-0408">Iron</keyword>
    <keyword evidence="15 26" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 24 25" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0492">Microsome</keyword>
    <keyword evidence="14 25" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="12 25" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="28" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6 26" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 26" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="26">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="24">
        <location>
            <position position="474"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00051005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00051234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00051269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00051419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00052460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00052887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00058503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="26">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="EMBL" id="ESW18884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="538" mass="61092" checksum="5119597CB2229C54" modified="2014-02-19" version="1">MGNTPFLLLSNLQSFWPSLFVIITCFIIMIKTLRSNFTESSKKQKPNLPPGPKPWPIVGNLPEMLAKEPAHKWIHNLMKEMNTEIACIRLGNAYVIPVTSPTIATEFLRKQDATFASRSLSMSTELISSGYSTTAFAPFGDQWKKMKKILTNDLLSPQKHLWLHDKRTEEAQNLTFYVYNKCKMVNDGISGLVNVRTAARHYCGNLIRKITFNTRYFGEAREDGGPGFEEVEHVDSIFDLLNYVNSFSVSDYMPCLRALDLDGHEKKVKEALRIVKKYHDPIVQQRIKQWNDGLKIDKEDWLDVLISLKDSNNNPSLTLEEINAQIIELMVATVDNPSNAFEWALAEMINQPELLHRAVEELDSVVGKDRMVQESDIPKLNYVKACAKEAFRLHPIAPFNPPHVSMSDTMVGNYFIPKGSHVLLSRQELGRNPKVWNEPYKFKPERHLKSDGDDVVLTEPNLKLISFSTGRRGCPGVMLGTTMTVMLFARLLHGFSWTAPPNVSTINLSESDHDILLAQPLLAVAQPRLPPQLYIYQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN38</accession>
    <name>V7BN38_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G003900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN38"/>
    <dbReference type="STRING" id="3885.V7BN38"/>
    <dbReference type="Gramene" id="ESW17986">
        <property type="protein sequence ID" value="ESW17986"/>
        <property type="gene ID" value="PHAVU_006G003900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2VM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GACNPIM"/>
    <dbReference type="OrthoDB" id="1678883at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34287:SF4">
        <property type="entry name" value="OS04G0504200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34287">
        <property type="entry name" value="OS06G0551500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754560" evidence="1">
        <location>
            <begin position="24"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="223" mass="25804" checksum="788479FF5B26B246" modified="2014-02-19" version="1" fragment="single">HYNLQRLLCVSLSLFLFLPFSLTQRKSFQIGLSAKKTKRQRKRKTQPLCFAMEFQRKSVKEKAEEEEEQAMVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPAPCTPMDLNLITPKKLSYEMGLGARCSVKKVGSKLRNKFNLNLHFINKHGKNKNNNKKLSSDFSPTPFKGSCNPIMNKRWAKALKAASKQFKKWKTKRDPIAHVMLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ10</accession>
    <name>V7BQ10_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Mg-protoporphyrin IX chelatase</fullName>
            <ecNumber evidence="10">6.6.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G178400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>protoporphyrin IX + Mg(2+) + ATP + H2O = Mg-protoporphyrin IX + ADP + phosphate + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:13961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60492"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.6.1.1"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="10">Redox regulation; active in reducing conditions, inactive in oxidizing conditions.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Porphyrin-containing compound metabolism; chlorophyll biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD and CHLH.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Plastid</location>
            <location evidence="10">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Mg-chelatase subunits D/I family.</text>
    </comment>
    <dbReference type="EC" id="6.6.1.1" evidence="10"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ10"/>
    <dbReference type="SMR" id="V7BQ10"/>
    <dbReference type="STRING" id="3885.V7BQ10"/>
    <dbReference type="Gramene" id="ESW20067">
        <property type="protein sequence ID" value="ESW20067"/>
        <property type="gene ID" value="PHAVU_006G178400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRUY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TVMERRF"/>
    <dbReference type="OrthoDB" id="34999at2759"/>
    <dbReference type="PhylomeDB" id="V7BQ10"/>
    <dbReference type="UniPathway" id="UPA00668"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010007">
        <property type="term" value="C:magnesium chelatase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016851">
        <property type="term" value="F:magnesium chelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00009">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.80:FF:000001">
        <property type="entry name" value="Mg-protoporphyrin IX chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000601">
        <property type="entry name" value="Mg-protoporphyrin IX chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.80">
        <property type="entry name" value="Magnesium chelatase subunit I, C-Terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045006">
        <property type="entry name" value="CHLI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011775">
        <property type="entry name" value="Mg_chelatase_ATPase-isu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000523">
        <property type="entry name" value="Mg_chelatse_chII-like_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02030">
        <property type="entry name" value="BchI-ChlI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039">
        <property type="entry name" value="MAGNESIUM-CHELATASE SUBUNIT CHLI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039:SF9">
        <property type="entry name" value="MAGNESIUM-CHELATASE SUBUNIT CHLI-2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01078">
        <property type="entry name" value="Mg_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 10" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="10" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="4 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 10" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="10" id="KW-0934">Plastid</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="11">
        <location>
            <begin position="104"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="417" mass="45557" checksum="9D574EF984F95E2B" modified="2014-02-19" version="1">MASTTLGTSSIALLPSRYFSSSSKPSVHTLSLTSGRKFYGGIGIHGIKGRSQFSVSSVATEVNSVEQNPRVAAKESQRPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVSGDPYNSDPVDPEFMGVEVRERVLQGEELSVVLTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERGRFDKNPKEFRDTYKAEQDKLQDQITSARSILSSVQIDQDLKVKISRVCAELNVDGLRGDIVTNRAAKALAALKGRDKVSTEDIATVIPNCLRHRLRKDPLESIDSGLLVTEKFYEVFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR56</accession>
    <name>V7BR56_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_006G2125000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR56"/>
    <dbReference type="Gramene" id="ESW20477">
        <property type="protein sequence ID" value="ESW20477"/>
        <property type="gene ID" value="PHAVU_006G2125000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AYQHERP"/>
    <dbReference type="OrthoDB" id="266718at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004709">
        <property type="term" value="F:MAP kinase kinase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050538">
        <property type="entry name" value="MAP_kinase_kinase_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016">
        <property type="entry name" value="MAP KINASE KINASE KINASE SSK2-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016:SF29">
        <property type="entry name" value="MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW20477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="112" mass="12596" checksum="5F7803E6B1EF4821" modified="2014-02-19" version="1" fragment="single">VVNLRSRGYGLAADIWSLGCTVLEMLTRQPPYSHLEPLQAIFQIEGGEPPLVPESISTNGRDFILKCLQADPNKRPTASQLLDHPFVNICTIKNGEQNKDVDYERKYISEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUS2</accession>
    <name>V7BUS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_005G014400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUS2"/>
    <dbReference type="STRING" id="3885.V7BUS2"/>
    <dbReference type="Gramene" id="ESW20783">
        <property type="protein sequence ID" value="ESW20783"/>
        <property type="gene ID" value="PHAVU_005G014400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3I6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEPCASE"/>
    <dbReference type="OrthoDB" id="1736050at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009788">
        <property type="term" value="P:negative regulation of abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.60">
        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044246">
        <property type="entry name" value="ZFP3-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287">
        <property type="entry name" value="C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47287:SF9">
        <property type="entry name" value="ZINC FINGER PROTEIN 4-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="8">
        <location>
            <begin position="110"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="21"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="83"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="93"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="32408" checksum="939D3720E6C3F14D" modified="2014-02-19" version="1">MASSHNLEDYSSEVSSTSQDICRKEEGKKVEVTPMKDKSIKFEEGHVSNPKTHMVLDFVKFSNDQSICGSKVELDFFNPMNVGGSSSRTNHNQGRDENNKEEKSSEAKTFSCNFCQKEFSSSQALGGHQNAHKQERALTKRRQGIDGGGFRNPHILYYPYPTHSLYGSYNRTLGVRMDSMIHKPLYPSSSLGLRFGQAFSRQGMINSSSLGLQKNTGIRIMESDTTLRTQSDHGTSRHNIPFLAESSTNVTNKSNLTSLKIENNDDHSKKEEISYLTSSFDEIDLSLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV36</accession>
    <name>V7BV36_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">C2H2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G025300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV36"/>
    <dbReference type="STRING" id="3885.V7BV36"/>
    <dbReference type="Gramene" id="ESW20915">
        <property type="protein sequence ID" value="ESW20915"/>
        <property type="gene ID" value="PHAVU_005G025300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1721">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYNAVHD"/>
    <dbReference type="OrthoDB" id="427030at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080084">
        <property type="term" value="F:5S rDNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="Classic Zinc Finger"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051061">
        <property type="entry name" value="Zinc_finger_trans_reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036236">
        <property type="entry name" value="Znf_C2H2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013087">
        <property type="entry name" value="Znf_C2H2_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46179:SF13">
        <property type="entry name" value="C2H2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46179">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00096">
        <property type="entry name" value="zf-C2H2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00355">
        <property type="entry name" value="ZnF_C2H2"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57667">
        <property type="entry name" value="beta-beta-alpha zinc fingers"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00028">
        <property type="entry name" value="ZINC_FINGER_C2H2_1"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50157">
        <property type="entry name" value="ZINC_FINGER_C2H2_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="19"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="65"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="93"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="122"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="162"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="C2H2-type" evidence="10">
        <location>
            <begin position="252"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW20915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="362" mass="42032" checksum="D615A8AB6F6418B6" modified="2014-02-19" version="1">MGEAMEAEERPKFRDIRRYFCEFCGICRSKKTLITSHMNSHHKEEVEKARAEREREPESEAVTSNTCGECGASFKKHAYLLQHMQSHSLERPYVCVVDDCQASYRRKDHLSRHLLQHQGKTFKCPVENCSTEFSLQSNVKRHVEEIHDDSSTSTCDKTHKQHTCPEIGCGKVFKFASQLRKHEDSHVKLESVDVVCLEPGCMKHFTNVQCLQAHVKSTHQYMTCETCGTKQLKKNIKRHLRTHEPISSPETFRCDFKGCSCTFSRKSNLDKHKKVVHFKEKPFVCGYADCGMRFAYKHVRDNHEKTTKHVFTLGDFEKADEEFRSRSRGGRKRKCPSVEMLLRNRVTSPSQLESWLFMGDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV82</accession>
    <name>V7BV82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Uridine 5'-monophosphate synthase</fullName>
            <ecNumber evidence="5">2.4.2.10</ecNumber>
            <ecNumber evidence="6">4.1.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_005G029300g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="20" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>orotidine 5'-phosphate + H(+) = UMP + CO2</text>
            <dbReference type="Rhea" id="RHEA:11596"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="4.1.1.23"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:10380"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 1/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the OMP decarboxylase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.10" evidence="5"/>
    <dbReference type="EC" id="4.1.1.23" evidence="6"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV82"/>
    <dbReference type="SMR" id="V7BV82"/>
    <dbReference type="STRING" id="3885.V7BV82"/>
    <dbReference type="Gramene" id="ESW20958">
        <property type="protein sequence ID" value="ESW20958"/>
        <property type="gene ID" value="PHAVU_005G029300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW20959">
        <property type="protein sequence ID" value="ESW20959"/>
        <property type="gene ID" value="PHAVU_005G029300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW20960">
        <property type="protein sequence ID" value="ESW20960"/>
        <property type="gene ID" value="PHAVU_005G029300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1377">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SAKHVCG"/>
    <dbReference type="OrthoDB" id="10263753at2759"/>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004588">
        <property type="term" value="F:orotate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004590">
        <property type="term" value="F:orotidine-5'-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04725">
        <property type="entry name" value="OMP_decarboxylase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.70:FF:000092">
        <property type="entry name" value="Uridine monophosphate synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2020:FF:000025">
        <property type="entry name" value="Uridine monophosphate synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01208">
        <property type="entry name" value="PyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014732">
        <property type="entry name" value="OMPdecase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018089">
        <property type="entry name" value="OMPdecase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001754">
        <property type="entry name" value="OMPdeCOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023031">
        <property type="entry name" value="OPRT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004467">
        <property type="entry name" value="Or_phspho_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRTase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF010382">
        <property type="entry name" value="PRK13809.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00336">
        <property type="entry name" value="pyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01740">
        <property type="entry name" value="pyrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19278">
        <property type="entry name" value="OROTATE PHOSPHORIBOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19278:SF9">
        <property type="entry name" value="URIDINE 5'-MONOPHOSPHATE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00215">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00934">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="PRTase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="Ribulose-phoshate binding barrel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00156">
        <property type="entry name" value="OMPDECASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="12" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="11" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Orotidine 5'-phosphate decarboxylase" evidence="18">
        <location>
            <begin position="247"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="active site" description="For OMPdecase activity" evidence="16">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <feature type="active site" description="For OMPdecase activity" evidence="16">
        <location>
            <position position="308"/>
        </location>
    </feature>
    <feature type="active site" description="For OMPdecase activity" evidence="16">
        <location>
            <position position="311"/>
        </location>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="366"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="429"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="17">
        <location>
            <position position="450"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00049126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00049157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR614732-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR614732-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="SMART" id="SM00934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW20960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="478" mass="51448" checksum="130C889E4A17FC9E" modified="2014-02-19" version="1">MSSSSLVESLVLQLHEISAVKFGNFKLKSGIYSPIYIDLRLIISYPSLLQQISQTLISSVSSTSYDLVCGVPYTALPIATCVSLAQSIPMVMRRKEIKDYGTAKAIEGDFKPGQNCLIIEDLVTSGTSVLETAAPLRASGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTDMVKILSNHGKLGEEMVGVVMKFLEENRKVAALAKVEKPATKVKALPFEERAKLSKNPMGKRLFEIMAAKASNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDIFPDFTPDFGSKLLSIAEKHNFLIFEDRKFADIGNTVTMQYAGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPSGRGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAREYRVEGWKAYLAKCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYY6</accession>
    <name>V7BYY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA-uridine aminocarboxypropyltransferase</fullName>
            <ecNumber evidence="1">2.5.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G104000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a uridine in tRNA + S-adenosyl-L-methionine = a 3-[(3S)-3-amino-3-carboxypropyl]uridine in tRNA + S-methyl-5'-thioadenosine + H(+)</text>
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            <dbReference type="Rhea" id="RHEA-COMP:16092"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:82930"/>
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        </reaction>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_005G104000g"/>
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        <property type="taxonomic scope" value="Eukaryota"/>
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        <property type="component" value="Chromosome 5"/>
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        <property type="term" value="F:tRNA-uridine aminocarboxypropyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="entry name" value="DTWD2/TAPT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21392:SF4">
        <property type="entry name" value="TRNA-URIDINE AMINOCARBOXYPROPYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21392">
        <property type="entry name" value="TRNA-URIDINE AMINOCARBOXYPROPYLTRANSFERASE 2"/>
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        <property type="match status" value="1"/>
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    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="DTW" evidence="6">
        <location>
            <begin position="148"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00048718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW21846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="390" mass="44235" checksum="21CDC463FF36F3B0" modified="2014-02-19" version="1">MDINMVSTLLSTKPLFQFHCSVPLPFWFWNKTRVLLARHYGYLRRHSSLSNTNMAQEEGVVSLQEWQGWGTTSPLPTMVAQIVHDLKGLEQDLDAHMSFGGNGGKLQGSFRIQEDKKHRATYQALADSEKKLQFYSARQIACRILGSRGYLCQKCWLPMEDCMCSEVTSCSLFPGIRFWLYMHPKDFLRQNNTGKILWQVFGVDAASLCLYGIPEHEEIMWNSFKVAGKSKVCCLYPNKSAVLKSVQNVFDQEPVTSDEVAPSELKVETTQHFILIDGTWSNSAAMFRRLQDKAKLVWGDEDLPCISLNPGASAMHKLRPQPSWDRTCTAAAAAGLLSELQLLPQFSSIELDKQEEAVEHALTVLLDALTKRRVRMGRSITRKVRQTNIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ37</accession>
    <name>V7BZ37_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G109900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ37"/>
    <dbReference type="SMR" id="V7BZ37"/>
    <dbReference type="STRING" id="3885.V7BZ37"/>
    <dbReference type="Gramene" id="ESW21911">
        <property type="protein sequence ID" value="ESW21911"/>
        <property type="gene ID" value="PHAVU_005G109900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNLLPKF"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051953">
        <property type="entry name" value="Plant_SW-associated_TFs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997">
        <property type="entry name" value="MYB DOMAIN PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997:SF28">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB15-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="8">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="121"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="232" mass="26835" checksum="3760BAC886E0999D" modified="2014-02-19" version="1">MVKCTFSEKSRLRKGTWTPEEDKKLSAYVTRYGHWNWNLLPKFAGLERCGKSCRLRWLNYLRPNIKRGNYTKEEDETIIKLLQSLGNRWSVIAAQLPGRTDNEIKNYWHTNLKKRFQPLKPQLSHSKDESPADEQVPTSQSTDSCTTATSPSQLSITTDTKENKFDNISEDDDFSFVDAYQLQPVIESIWLEPYMVDISCIASAFLPEPDYFSPASDIELVSDIELWDHSNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0A8</accession>
    <name>V7C0A8_PHAVU</name>
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        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Protein ACT DOMAIN REPEATS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G181700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds amino acids.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0A8"/>
    <dbReference type="STRING" id="3885.V7C0A8"/>
    <dbReference type="Gramene" id="ESW22793">
        <property type="protein sequence ID" value="ESW22793"/>
        <property type="gene ID" value="PHAVU_005G181700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWKY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YITHKTR"/>
    <dbReference type="OrthoDB" id="496180at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="entry name" value="ACR1-12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096:SF89">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="88"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW22793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="280" mass="30275" checksum="C763A2373E898A0E" modified="2014-02-19" version="1">MAVAMAPCSLGLHLGAEKTTVFKPSSVSDVAKLCYITHKTRLSSSGITIIPRASTVTGTVEDGSQGEADTIPTPIVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPELLEAIRLTILNQMIQYHPESSAQLALGAAFGLVAPLQQVDVEIATHITIFDDGPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVNYKDKALIKPLQQVLVNSLRYFLRRPTTEESSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C171</accession>
    <name>V7C171_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">histidinol-phosphate transaminase</fullName>
            <ecNumber evidence="3">2.6.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Imidazole acetol-phosphate transaminase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G083900g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:23744"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:57980"/>
            <dbReference type="EC" id="2.6.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 7/9.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C171"/>
    <dbReference type="SMR" id="V7C171"/>
    <dbReference type="STRING" id="3885.V7C171"/>
    <dbReference type="Gramene" id="ESW23879">
        <property type="protein sequence ID" value="ESW23879"/>
        <property type="gene ID" value="PHAVU_004G083900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0633">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NFVQFGR"/>
    <dbReference type="OrthoDB" id="2015537at2759"/>
    <dbReference type="PhylomeDB" id="V7C171"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004400">
        <property type="term" value="F:histidinol-phosphate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:L-histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00609">
        <property type="entry name" value="AAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01023">
        <property type="entry name" value="HisC_aminotrans_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005861">
        <property type="entry name" value="HisP_aminotrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01141">
        <property type="entry name" value="hisC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42885:SF2">
        <property type="entry name" value="HISTIDINOL-PHOSPHATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42885">
        <property type="entry name" value="HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="8" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="11">
        <location>
            <begin position="96"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="423" mass="47256" checksum="C594924C89235140" modified="2014-02-19" version="1">MGVIDFYNSAALCWVKSNTNLKQQLGLPPKPICSFEGNQRKFVAMASTIPVEQVNNGPLQVTGDSFIREHLRKLSPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSIKFPYVYPDPESRRLRAALAQDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSVIDDDVLLKILDLPILVILDEAYIEFSAIESKMSWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEFLWRAKQPYNVSVAAEISACAALQNPTYLENVKNALLKERGRLFDLLKEVPFLRPFPSHSNFILCEVTSGKDAKKLKEDLSQMGVMIRHYDKKELKGYVRVSVGKPEQTDILMKCLKELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C253</accession>
    <name>V7C253_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G110300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be involved in environmental stress response.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C253"/>
    <dbReference type="SMR" id="V7C253"/>
    <dbReference type="STRING" id="3885.V7C253"/>
    <dbReference type="Gramene" id="ESW24199">
        <property type="protein sequence ID" value="ESW24199"/>
        <property type="gene ID" value="PHAVU_004G110300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3173">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYKTISQ"/>
    <dbReference type="OrthoDB" id="428577at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1110.10:FF:000001">
        <property type="entry name" value="Zinc finger AN1-type containing 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.4770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1110.10">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035896">
        <property type="entry name" value="AN1-like_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050652">
        <property type="entry name" value="AN1_A20_ZnFinger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002653">
        <property type="entry name" value="Znf_A20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000058">
        <property type="entry name" value="Znf_AN1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10634">
        <property type="entry name" value="AN1-TYPE ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10634:SF124">
        <property type="entry name" value="ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01754">
        <property type="entry name" value="zf-A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01428">
        <property type="entry name" value="zf-AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00259">
        <property type="entry name" value="ZnF_A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00154">
        <property type="entry name" value="ZnF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118310">
        <property type="entry name" value="AN1-like Zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51036">
        <property type="entry name" value="ZF_A20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51039">
        <property type="entry name" value="ZF_AN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="A20-type" evidence="6">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="AN1-type" evidence="7">
        <location>
            <begin position="84"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW24199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="150" mass="16835" checksum="F170744891B11662" modified="2014-02-19" version="1">MVTSLCANGCGFNGSPINKNLCSKCYKDYLKENNTKAKGCKGAQCEANNMNNKKNYFEVTSCISESSTSSIIDDMTSVSDVSKKNERKRCNSCKKRIGLLGFQCRCGDVFCGSHRYPEMHACKIDWKKIGREVLIKENPLCISDKLKHRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2L3</accession>
    <name>V7C2L3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_004G061900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2L3"/>
    <dbReference type="SMR" id="V7C2L3"/>
    <dbReference type="Gramene" id="ESW23608">
        <property type="protein sequence ID" value="ESW23608"/>
        <property type="gene ID" value="PHAVU_004G061900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAITASF"/>
    <dbReference type="OrthoDB" id="6612291at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005351">
        <property type="term" value="F:carbohydrate:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd17315">
        <property type="entry name" value="MFS_GLUT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000152">
        <property type="entry name" value="Plastidic glucose transporter 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050360">
        <property type="entry name" value="MFS_Sugar_Transporters"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48022">
        <property type="entry name" value="PLASTIDIC GLUCOSE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48022:SF2">
        <property type="entry name" value="PLASTIDIC GLUCOSE TRANSPORTER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="202"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="346"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="382"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="411"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="442"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="478"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="504"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="9">
        <location>
            <begin position="109"/>
            <end position="532"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW23608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="547" mass="57235" checksum="7D0816DF2BB79AE9" modified="2014-02-19" version="1">MHASTFGVKGVTLGVPKRRGLVDFVEFRNGSVLRHSRVSMAKSNTDLCGLRLGSATMETKLIGTSVGFGGIFGSSVKPRSVRVMTSDGNTEDVVPATIQSRSSGTVLPYVGVACLGAILFGYHLGVVNGALEYLAKDLGITENTVLQGWIVSTLLAGATAGSFTGGSLADKFGRTRTFQLAAIPLAIGAFLSATAQSVQPMIIGRLLAGVGIGVTSAIVPLYISEISPTEVRGALGSVNQLFICIGILLALVAGLPLAGNPSWWRTMFGIAVVPSVLLALGMAISPESPRWLFQQGKLAEAEKAIKTLYGKERVATVMLDLSTASQGSSEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIASDVAASALVGASNVFGTAIASSLMDKQGRKSLLIISFSGMAASMLLLSLSFTWKVLVPYSGPLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGTHWISNFVIGLYFLSVVNKFGISTVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIERALSSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2R5</accession>
    <name>V7C2R5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MADS-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G060700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2R5"/>
    <dbReference type="Gramene" id="ESW23595">
        <property type="protein sequence ID" value="ESW23595"/>
        <property type="gene ID" value="PHAVU_004G060700g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="601557at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="260" mass="29364" checksum="57964EF238F73074" modified="2014-02-19" version="1">MKKISEFSKKCGGEHCLIVFDDDNGDIGPMTSPQNPVEIHSTIQKYYESQLKNGKPHKTYGIDEFLENRKNMIEVEISKVDKQISNIKYPTWDPSMANMEEDQLKAFCAHVDAKMEACDQGIQLLKNKPLGLVSNMSQENTTATTSHPNQVNYLQSISQSEVLLDDFLNQLNDKNYGMVDFSNTVDVPLNSTNELSDLEFEELILGLTCDDPVGCSNETDEFVLPSICVEYQNEQQGGGDLHALTPTLDVFQTNYYNMYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3V6</accession>
    <name>V7C3V6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Light-harvesting complex-like protein OHP2, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G091300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3V6"/>
    <dbReference type="SMR" id="V7C3V6"/>
    <dbReference type="STRING" id="3885.V7C3V6"/>
    <dbReference type="Gramene" id="ESW23970">
        <property type="protein sequence ID" value="ESW23970"/>
        <property type="gene ID" value="PHAVU_004G091300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXUG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FPCIKFQ"/>
    <dbReference type="OrthoDB" id="2019915at2759"/>
    <dbReference type="PhylomeDB" id="V7C3V6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053091">
        <property type="entry name" value="PSII_Assembly/Photoprotect-Rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37752">
        <property type="entry name" value="OS02G0610700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37752:SF1">
        <property type="entry name" value="OS02G0610700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103511">
        <property type="entry name" value="Chlorophyll a-b binding protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="16"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="83"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="183" mass="19912" checksum="F7AA35419ECC2800" modified="2014-02-19" version="1">MSMASSIPCIKIPTCSSSPSCTSSTSSYSLRFSSSKPHSVTIRNSQAEGPVRRPVAPQIREPSSSVPQLQKPTLPSQTPPSSPSVVPSPQKPATVVVGDDKNVITLEFQRQKAKELKEYFKQKKLEEANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQIKILLSNFGIVDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4Q1</accession>
    <name>V7C4Q1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G008400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4Q1"/>
    <dbReference type="SMR" id="V7C4Q1"/>
    <dbReference type="STRING" id="3885.V7C4Q1"/>
    <dbReference type="Gramene" id="ESW25114">
        <property type="protein sequence ID" value="ESW25114"/>
        <property type="gene ID" value="PHAVU_003G008400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RM8S">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICEAVPN"/>
    <dbReference type="OrthoDB" id="551907at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000002">
        <property type="entry name" value="Myb family transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046955">
        <property type="entry name" value="PHR1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31314:SF155">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31314">
        <property type="entry name" value="MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="6">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="78"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="298" mass="33073" checksum="3993EBA7D4A578C0" modified="2014-02-19" version="1">MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGDSCRQVTDKTSTQHRKQSFQEHDDEEGDVGFHSCLKSIGKESDSQSSCSNFSLKRARIEKTSLFSGFPHCSQRICEAVPNPYTTFYDYLQSMAEQKGIKKICAGSILQTQPLSTTFLPMLPSQESDLLQVAHLNDKQPLNEAENSCRVQSEDENMGGCELSLSISLPQPHPSSQKSNASSVSSISEAFSLCPKFNTTNNNNYMGCSSSSNVPNTVNVDLSLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5M5</accession>
    <name>V7C5M5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF1639 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G036300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5M5"/>
    <dbReference type="SMR" id="V7C5M5"/>
    <dbReference type="STRING" id="3885.V7C5M5"/>
    <dbReference type="Gramene" id="ESW25444">
        <property type="protein sequence ID" value="ESW25444"/>
        <property type="gene ID" value="PHAVU_003G036300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ6T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEFPPPQ"/>
    <dbReference type="OrthoDB" id="769821at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012438">
        <property type="entry name" value="DUF1639"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33130:SF43">
        <property type="entry name" value="OS01G0688600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33130">
        <property type="entry name" value="PUTATIVE (DUF1639)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07797">
        <property type="entry name" value="DUF1639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="147"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="258" mass="28866" checksum="28E2C0044C377276" modified="2014-02-19" version="1">MALRGSKDKTEAKSMAPATTRRSTPLHNFTLPFLKWGTQRRMRCATGTNAGASGRGFSVSNSDESTATWSEAPGAARGQKRRHVGDGEDIAVVRQRLILDLKTEADRMKDAILQSGEESMRPWNLRKRRAKVEALAVAPDDCGRKVLIDDKKRNQSPATKDDGAAKLPQLRSRSDKTERVKFDVQLSKKEIDEDFMAILGQRAPRRPTKRPKLQQRMLDTLSPGLWLTEITADMYKVVEVADNTKVRHPGKRKVDGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7J8</accession>
    <name>V7C7J8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G028400g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex. May be involved in lateral roots and nodules formation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7J8"/>
    <dbReference type="SMR" id="V7C7J8"/>
    <dbReference type="STRING" id="3885.V7C7J8"/>
    <dbReference type="Gramene" id="ESW25348">
        <property type="protein sequence ID" value="ESW25348"/>
        <property type="gene ID" value="PHAVU_003G028400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWAYFIN"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015171">
        <property type="term" value="F:amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1740.10:FF:000033">
        <property type="entry name" value="Lysine histidine transporter 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48017">
        <property type="entry name" value="OS05G0424000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="10" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="152"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="301"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="346"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="372"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="404"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="14">
        <location>
            <begin position="28"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00045588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00061463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="49117" checksum="2EFA144A77E1FA09" modified="2014-02-19" version="1">MVSGSSPPSKEMEVQSDQKWVENGPSRNAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWVPGTLILLLTWCLTLNSMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACTNCTQLKQSYWIVIFGGIHFLLSQLPNFNSVAGVSLAAAVMSLSYSTIAWVACVGRGRVENVSYAYKQTSSTDLMFRIFNALGQISFAFAGHAVTLEIQATIPSTPEKPSKIPMWRGAIGAYFINAICYFPLALVGYWTFGRDVEDNVLMEFDKPAWLIASANLMVFIHVVGSYQVYAMPVFDLIERLMVRRFNFPPGLSLRLVARSAFVAFTLFVGVTFPFFGDLLGFFGGFGFAPTSYFLPSVMWLIIKKPKRFTINWFINWGSIYVGVCIMLVSTIGGLRNIVADSSTYKFYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9P5</accession>
    <name>V7C9P5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Heat shock 70 kDa protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G154800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9P5"/>
    <dbReference type="SMR" id="V7C9P5"/>
    <dbReference type="STRING" id="3885.V7C9P5"/>
    <dbReference type="Gramene" id="ESW26864">
        <property type="protein sequence ID" value="ESW26864"/>
        <property type="gene ID" value="PHAVU_003G154800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0101">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VPMADDM"/>
    <dbReference type="OrthoDB" id="3789372at2759"/>
    <dbReference type="PhylomeDB" id="V7C9P5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009615">
        <property type="term" value="P:response to virus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd10233">
        <property type="entry name" value="ASKHA_NBD_HSP70_HSPA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.34.10:FF:000002">
        <property type="entry name" value="Heat shock 70 kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.640.10:FF:000002">
        <property type="entry name" value="Heat shock 70 kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.30.30:FF:000019">
        <property type="entry name" value="Heat shock 70 kDa protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000172">
        <property type="entry name" value="Heat shock 70 kDa protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000465">
        <property type="entry name" value="Heat shock cognate 70 kDa protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1270.10:FF:000005">
        <property type="entry name" value="heat shock cognate 70 kDa protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.40:FF:000026">
        <property type="entry name" value="Heat shock protein 70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="entry name" value="Substrate Binding Domain Of DNAk, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001413">
        <property type="entry name" value="PRK00290.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="HEAT SHOCK PROTEIN 70KDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00301">
        <property type="entry name" value="HEATSHOCK70"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), C-terminal subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="Heat shock protein 70kD (HSP70), peptide-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="621"/>
            <end position="649"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="649" mass="71141" checksum="CD4B2BBA00EC2A25" modified="2014-02-19" version="1">MAAKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSPVQNDMKLWPFKVVAGPGDKPMIVVSYKGEEKKFSAEEISSMVLIKMREVAEAFLGHAVKNAVITVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVSEFRRKHKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSHVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAEKYKAEDEEVKKKVDAKNSLENYAYNMRNTIKDEKIGGKLEADDKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQGGAAGDVPMADDMPGAGSGAGSGAGPKIEEVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9Q6</accession>
    <name>V7C9Q6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Sodium/hydrogen exchanger</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_003G089800g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>K(+)(in) + H(+)(out) = K(+)(out) + H(+)(in)</text>
            <dbReference type="Rhea" id="RHEA:29467"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>Na(+)(in) + H(+)(out) = Na(+)(out) + H(+)(in)</text>
            <dbReference type="Rhea" id="RHEA:29419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9Q6"/>
    <dbReference type="STRING" id="3885.V7C9Q6"/>
    <dbReference type="Gramene" id="ESW26083">
        <property type="protein sequence ID" value="ESW26083"/>
        <property type="gene ID" value="PHAVU_003G089800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1965">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MISISSQ"/>
    <dbReference type="OrthoDB" id="196264at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015386">
        <property type="term" value="F:potassium:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015385">
        <property type="term" value="F:sodium:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051453">
        <property type="term" value="P:regulation of intracellular pH"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098719">
        <property type="term" value="P:sodium ion import across plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018422">
        <property type="entry name" value="Cation/H_exchanger_CPA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004709">
        <property type="entry name" value="NaH_exchanger"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00840">
        <property type="entry name" value="b_cpa1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10110">
        <property type="entry name" value="SODIUM/HYDROGEN EXCHANGER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10110:SF127">
        <property type="entry name" value="SODIUM_HYDROGEN EXCHANGER 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01084">
        <property type="entry name" value="NAHEXCHNGR"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0050">Antiport</keyword>
    <keyword evidence="8 13" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0630">Potassium</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0915">Sodium</keyword>
    <keyword evidence="10 13" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4 13 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="151"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="262"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="304"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="346"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="380"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="422"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="447"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="Cation/H+ exchanger transmembrane" evidence="16">
        <location>
            <begin position="46"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="550"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="14">
        <location>
            <begin position="563"/>
            <end position="572"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW26083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="572" mass="62700" checksum="DB7A559111A2B4B3" modified="2014-02-19" version="1">MTKGNNQISPADGVDVSGGSKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVLPEASASLLIGLLVGTLANISHTQTSIRNLTSSLSAKQGVVQLSRGVFLPLPFTSYNIISLTTRILLFLFAFPSFHHNYSLLSFLDLPLSLYSKPFFSNFGAIVTFAIFGTFLASIVTGVLVYLGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMTVIKTHPSGQNFFMVVVRFLETFVGSMSAGVGVGFISALLFKYSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTFSNLSRSSQRFVSSFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARAVNVFSCAYLVNLVRPAYRQIPRKHQKALWYSGLRGAMAFALALQSIHDLPDGHGQTILTATTAIVVLTVLLIGGSTGTMLEALQVVGSDSPIIESPLASLTRTNFEGNNGYFSPDDEEPSSGNKIKMKLQEFQRSAASFTALDKNYLTPFFTSQNEDEAMPLTSENMGLDDLDNYSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBK6</accession>
    <name>V7CBK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ubiquitin-like modifier-activating enzyme 5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G211200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ubiquitin-activating E1 family. UBA5 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBK6"/>
    <dbReference type="SMR" id="V7CBK6"/>
    <dbReference type="STRING" id="3885.V7CBK6"/>
    <dbReference type="Gramene" id="ESW27544">
        <property type="protein sequence ID" value="ESW27544"/>
        <property type="gene ID" value="PHAVU_003G211200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2336">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MNIVKDY"/>
    <dbReference type="OrthoDB" id="206053at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071566">
        <property type="term" value="F:UFM1 activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071569">
        <property type="term" value="P:protein ufmylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00757">
        <property type="entry name" value="ThiF_MoeB_HesA_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000066">
        <property type="entry name" value="Putative ubiquitin-like modifier-activating enzyme 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="UBIQUITIN-ACTIVATING ENZYME E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953:SF9">
        <property type="entry name" value="UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="Activating enzymes of the ubiquitin-like proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="THIF-type NAD/FAD binding fold" evidence="9">
        <location>
            <begin position="65"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="374"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="46746" checksum="8E97C284B7F1EE9A" modified="2014-02-19" version="1">MEIELKELNADLQFLSQSLPDPSHHALLRKIQLRVDDLAKLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGLTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKKKSFRPNKEGSGVDLVLSCVDNYEARMAVNQACNELNQTWMESGVSEDAVSGHIQLLIPGESACFACAPPLVVASGIDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEVLSTEEVPLHDDNEWNISVVDDVELDGPDTRSSDVLPEGLTRELPSADEFHKATLDSPEANNDDLEDLRRQLEAINSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEB1</accession>
    <name>V7CEB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">acyl-CoA oxidase</fullName>
            <ecNumber evidence="4">1.3.3.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_003G222800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Peroxisome</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the acyl-CoA oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.6" evidence="4"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEB1"/>
    <dbReference type="STRING" id="3885.V7CEB1"/>
    <dbReference type="Gramene" id="ESW27683">
        <property type="protein sequence ID" value="ESW27683"/>
        <property type="gene ID" value="PHAVU_003G222800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0136">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HMETHAY"/>
    <dbReference type="OrthoDB" id="538336at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005777">
        <property type="term" value="C:peroxisome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003997">
        <property type="term" value="F:acyl-CoA oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005504">
        <property type="term" value="F:fatty acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033540">
        <property type="term" value="P:fatty acid beta-oxidation using acyl-CoA oxidase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055088">
        <property type="term" value="P:lipid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001676">
        <property type="term" value="P:long-chain fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.540.10:FF:000015">
        <property type="entry name" value="Acyl-coenzyme A oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.10:FF:000005">
        <property type="entry name" value="Acyl-coenzyme A oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.110.10:FF:000075">
        <property type="entry name" value="Acyl-coenzyme A oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="entry name" value="Acyl-CoA dehydrogenase/oxidase, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="entry name" value="Butyryl-CoA Dehydrogenase, subunit A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.10">
        <property type="entry name" value="Butyryl-CoA Dehydrogenase, subunit A, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055060">
        <property type="entry name" value="ACOX_C_alpha1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029320">
        <property type="entry name" value="Acyl-CoA_ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012258">
        <property type="entry name" value="Acyl-CoA_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10909">
        <property type="entry name" value="ELECTRON TRANSPORT OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10909:SF250">
        <property type="entry name" value="PEROXISOMAL ACYL-COENZYME A OXIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22924">
        <property type="entry name" value="ACOX_C_alpha1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14749">
        <property type="entry name" value="Acyl-CoA_ox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="Acyl-CoA dehydrogenase C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="Acyl-CoA dehydrogenase NM domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0274">FAD</keyword>
    <keyword evidence="7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-0576">Peroxisome</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-coenzyme A oxidase N-terminal" evidence="12">
        <location>
            <begin position="18"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA oxidase/dehydrogenase middle" evidence="11">
        <location>
            <begin position="135"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA oxidase C-alpha1" evidence="13">
        <location>
            <begin position="279"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF22924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW27683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="493" mass="55570" checksum="5A2734C2FDA967ED" modified="2014-02-19" version="1">MEGVVDHLAFERNKTQFDVEEMKIIWAGSRHALEVSDKMARLVASDPAFRKDDRPRLGRKELFKNTLKKTVYAWKRIIELRLSEEEASKLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQKWLPLAQKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKVSTHAIVYARLITDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYAQSSVPRQLVYGTMVYVRQTIVSDASLAMSRAVCIATRYSAVRRQFGSKQGSLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCGGHGYLCSSGLPELFAVYIPTCTYEGDNIVLLLQVARHLIKSISQLRSGKKPVGTTSYIGRVEQLMLYRSDVQKGITAHKKPTRYNTKWYKKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEZ0</accession>
    <name>V7CEZ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ACT domain-containing protein ACR</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Protein ACT DOMAIN REPEATS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G009500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Binds amino acids.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEZ0"/>
    <dbReference type="Gramene" id="ESW28689">
        <property type="protein sequence ID" value="ESW28689"/>
        <property type="gene ID" value="PHAVU_002G009500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQHS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRSLTMF"/>
    <dbReference type="OrthoDB" id="2019938at2759"/>
    <dbReference type="PhylomeDB" id="V7CEZ0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04895">
        <property type="entry name" value="ACT_ACR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040217">
        <property type="entry name" value="ACR1-12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096:SF7">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31096">
        <property type="entry name" value="ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="ACT-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="37"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="134"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="354"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="428"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="479" mass="53457" checksum="682DEEE8834B7296" modified="2014-02-19" version="1">MEIWYHAHIDREIESLIKRIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSDGGWFMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDREGGSDKGEEEEVVGREITAMEMSGMDRTGLLSELSGMLVELGCIVTAATAWTHNDRVACIILVEDESKGGPISDPKRLGLVEEQLENVVAAHRGERKRVRVTRLGAGHTHRERRLHQLMYADRDYESCRACDGDSSGEHKKECDGTHVSVGRCEDKGYLMVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSMANQEYYIRHSMGSAGFPSESEKQKLTLCLIAAVERRVSHGLRVDILTENRKGLLSNVTRVLRENGLSISRVEIETEGGKAEGSFFVRDCSGEEVNPNIVELVKQETGGSVVIDHKSPHRLHQSSSSSSSSVINQSKDTVEAKQKFSLGSLLWSRLERLSSGFGPIRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG10</accession>
    <name>V7CG10_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G274100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the WEB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG10"/>
    <dbReference type="SMR" id="V7CG10"/>
    <dbReference type="STRING" id="3885.V7CG10"/>
    <dbReference type="Gramene" id="ESW28283">
        <property type="protein sequence ID" value="ESW28283"/>
        <property type="gene ID" value="PHAVU_003G274100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQFI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANEDSTQ"/>
    <dbReference type="OrthoDB" id="1432432at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009904">
        <property type="term" value="P:chloroplast accumulation movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009903">
        <property type="term" value="P:chloroplast avoidance movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008545">
        <property type="entry name" value="Web"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32054">
        <property type="entry name" value="HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32054:SF46">
        <property type="entry name" value="WEB FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05701">
        <property type="entry name" value="WEMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="538"/>
            <end position="596"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="69"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="364"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="473"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="538"/>
            <end position="552"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW28283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="615" mass="69462" checksum="495908E3AFA6491C" modified="2014-02-19" version="1">MELQPESPTGRNDSSGASPRFSKHFIDTAAPFESVKHAVSKFGGRVDWRSRRTQSLVEERSKIVEDFRKEETIEELENTKKLTEVLRRNLQKVEKDEVLAKEEAERVILKIEEMEQDIVSEASVEAKAELETEKSMLKKVLAELELVKKELDSLRKEYASMVSGRDTAINNAEETVAASKQIEKAVEDLIAELNETKEALNSSRAAHFEAEEQRLGVLDEETLNLKLELEQAEEDLQRLNDKVLSVRLLKSKLESAASLVLDLKAEMAAYMESKEKEECCREQKEELEELKQNIEKATSDVKSMREAYVSLKSKLEEEKSILAALKQSEEMASAAVLNLQTELEKSKTAAIFIEMQENEAREMMSELPKKLQIAEEEADEAKSLVQAAEEELLEAQEEVEEVKSRSITLESSLLAAQKEIEAAKISEMLARDAITALEKSESAKEKIEKSSTSMVTLTLDEYHELSRRAYKAEEQANERIEAANVQIKIARESEYKSLERLEELNEELSIRKESFNIATGNAEKATEGKLAVEHELRTLRDDQDSPQEKGNELNDQIASEIVPVHDESSSPKEAVPSNNTEPGAASDKNKKKKKKSLFPSKVVMFFAKKKTHPTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH45</accession>
    <name>V7CH45_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">chitinase</fullName>
            <ecNumber evidence="2">3.2.1.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G268600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1-&gt;4)-beta-linkages in chitin and chitodextrins.</text>
            <dbReference type="EC" id="3.2.1.14"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.2.1.14" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH45"/>
    <dbReference type="STRING" id="3885.V7CH45"/>
    <dbReference type="Gramene" id="ESW28216">
        <property type="protein sequence ID" value="ESW28216"/>
        <property type="gene ID" value="PHAVU_003G268600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4742">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DARCKSN"/>
    <dbReference type="OrthoDB" id="5985073at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008061">
        <property type="term" value="F:chitin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008843">
        <property type="term" value="F:endochitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006032">
        <property type="term" value="P:chitin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050832">
        <property type="term" value="P:defense response to fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00325">
        <property type="entry name" value="chitinase_GH19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00035">
        <property type="entry name" value="ChtBD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.20.10:FF:000001">
        <property type="entry name" value="Endochitinase (Chitinase)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.20.10">
        <property type="entry name" value="Endochitinase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036861">
        <property type="entry name" value="Endochitinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016283">
        <property type="entry name" value="Glyco_hydro_19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000726">
        <property type="entry name" value="Glyco_hydro_19_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595:SF171">
        <property type="entry name" value="BASIC ENDOCHITINASE B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22595">
        <property type="entry name" value="CHITINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00182">
        <property type="entry name" value="Glyco_hydro_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001060">
        <property type="entry name" value="Endochitinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="Lysozyme-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57016">
        <property type="entry name" value="Plant lectins/antimicrobial peptides"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00774">
        <property type="entry name" value="CHITINASE_19_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7" id="KW-0146">Chitin degradation</keyword>
    <keyword evidence="3" id="KW-0147">Chitin-binding</keyword>
    <keyword evidence="8 13" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0611">Plant defense</keyword>
    <keyword evidence="11" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Glycoside hydrolase family 19 catalytic" evidence="14">
        <location>
            <begin position="246"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="12">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="13">
        <location>
            <begin position="75"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="13">
        <location>
            <begin position="122"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="13">
        <location>
            <begin position="195"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="13">
        <location>
            <begin position="301"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001060-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR001060-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS00774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW28216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="340" mass="37629" checksum="5C59270F04B09722" modified="2014-02-19" version="1" fragment="single">KSSFINSFIIVVQQIIKQKWVPSKCVLLCYGYCYHSFLVPQQNSVVHKLVEHCAQMGYVAANWCGDTDSYCGDGCQSRCKSGPKPTPTPSTPTPTPSNGDISRLISSSLFDKMLKYRNDGRCAARGFYKYDAFIAAARSFRGFGTTGDDNTRKKEIAAFLAQTSHETTGGWPSAPDGPYAWGYCFINEQNQADYCDGGEWPCAAGKKYYGRGPIQLTHNYNYGQAGKALELDLIKNPDLVATDATVSFKTALWFWMTAQGNKPSSHDVITGRWRPSRADTSAGRLPGFGVITNIINGGIECLNRQESLVQNRIGFYQRYCQMGINPGANLDCNTQRPFNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHI4</accession>
    <name>V7CHI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G020800g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHI4"/>
    <dbReference type="SMR" id="V7CHI4"/>
    <dbReference type="STRING" id="3885.V7CHI4"/>
    <dbReference type="Gramene" id="ESW28818">
        <property type="protein sequence ID" value="ESW28818"/>
        <property type="gene ID" value="PHAVU_002G020800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LETHDQW"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001864">
        <property type="entry name" value="Calcium-dependent protein kinase SK5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000085">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000101">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001294">
        <property type="entry name" value="CDPK-related kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7" id="KW-0519">Myristate</keyword>
    <keyword evidence="9 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="137"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="16">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="16">
        <location>
            <begin position="49"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="589" mass="65806" checksum="8A1653BDE5D9382F" modified="2014-02-19" version="1">MGLCTSKPTLSSPQSTTHSPVRPSQNGAVAITDSHSAEPHVHSTNGESENPKELENGKRSPFFPFYSPSPGRYVFPVSPHRFFKRSFLSPSPAKHIRAALARRHGSVKPNEAAIPEAEAVAGLDKNFGFSKHLGNKYEVGDEVGRGHFGYTSVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHNNVYIVMELCEGGELLDRILSRGGKYTEEEAKVVLRQILNVVAFCHLQGVVHRDLKPENFLFTSMDENSNLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYGTEADVWSIGVIAYILLCGSRPFWARTESGIFHAVLKADPSFDEPPWPSLTDEATNFVMRLLNKDPRKRMSAAQALSHPWIKNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGSISLENIKAVLMVNATDAMNESRVPDFLTSLNALQFRRMDFDEFCAAALSVHQLETHDQWEQRARYAYELFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIL7</accession>
    <name>V7CIL7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Survival protein SurE-like phosphatase/nucleotidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G045800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SurE nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIL7"/>
    <dbReference type="SMR" id="V7CIL7"/>
    <dbReference type="STRING" id="3885.V7CIL7"/>
    <dbReference type="Gramene" id="ESW29130">
        <property type="protein sequence ID" value="ESW29130"/>
        <property type="gene ID" value="PHAVU_002G045800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUQI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IKMGWRQ"/>
    <dbReference type="OrthoDB" id="202825at2759"/>
    <dbReference type="PhylomeDB" id="V7CIL7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008252">
        <property type="term" value="F:nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.1210.10:FF:000003">
        <property type="entry name" value="Survival protein SurE-like phosphatase/nucleotidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1210.10">
        <property type="entry name" value="Survival protein SurE-like phosphatase/nucleotidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00060">
        <property type="entry name" value="SurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030048">
        <property type="entry name" value="SurE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002828">
        <property type="entry name" value="SurE-like_Pase/nucleotidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036523">
        <property type="entry name" value="SurE-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00087">
        <property type="entry name" value="surE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30457">
        <property type="entry name" value="5'-NUCLEOTIDASE SURE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30457:SF0">
        <property type="entry name" value="PHOSPHATASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G01070)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01975">
        <property type="entry name" value="SurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64167">
        <property type="entry name" value="SurE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Survival protein SurE-like phosphatase/nucleotidase" evidence="4">
        <location>
            <begin position="9"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW29130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="300" mass="32224" checksum="976AFAB55A927700" modified="2014-02-19" version="1">MEGGKLGTILITNDDGIDAPGLRALVQSLVVANLFNLQVCAPDSEKSAVSHSITWLHPIAAKQVKIDGTTAFAVSGTPADCASLGVSKALFPTVPDLVVSGINKGSNCGYHIVYSGTVAGAREAFFNDVPSISISYNWVKGKSDLNDFTLAAQVCLPIISAVLVEAKNPSYPRKCFLNVDVPTVVPNHKGYKLTKQGKSIIKMGWKQVTSETEGQKMSSDMTNTDTDISKNFDPSSVSPEHLLFTREVRGSHLDDDESDYRSLQEGYITVTPLAALSHAEVDCQAYFKNWLQSVPGPSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKH2</accession>
    <name>V7CKH2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G067900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKH2"/>
    <dbReference type="Gramene" id="ESW29406">
        <property type="protein sequence ID" value="ESW29406"/>
        <property type="gene ID" value="PHAVU_002G067900g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="101" mass="11940" checksum="5531C49C1458FDA9" modified="2014-02-19" version="1">MFELDFLKLGYIFWATPFYFCAYTLPFNLFIFHRRHIFTRVRAVAAKPHSLLMEQPSFIFFGQKCPAHVMIQDGQYRNASICFDTDLLIESPWVALQMHVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKH5</accession>
    <name>V7CKH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Zinc finger ZPR1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G0993002g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ZPR1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKH5"/>
    <dbReference type="STRING" id="3885.V7CKH5"/>
    <dbReference type="Gramene" id="ESW29790">
        <property type="protein sequence ID" value="ESW29790"/>
        <property type="gene ID" value="PHAVU_002G0993002g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2703">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1664540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1040">
        <property type="entry name" value="ZPR1, A/B domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004457">
        <property type="entry name" value="Znf_ZPR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040141">
        <property type="entry name" value="ZPR1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042451">
        <property type="entry name" value="ZPR1_A/B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056180">
        <property type="entry name" value="ZPR1_jr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10876">
        <property type="entry name" value="ZINC FINGER PROTEIN ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10876:SF0">
        <property type="entry name" value="ZINC FINGER PROTEIN ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22794">
        <property type="entry name" value="jr-ZPR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00709">
        <property type="entry name" value="Zpr1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Zinc finger ZPR1-type" evidence="5">
        <location>
            <begin position="2"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW29790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="132" mass="14772" checksum="BD12ED30C983FB3A" modified="2014-02-19" version="1" fragment="single">MLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRATDELQALQEERKKVAPETAEAIDQFLVKLRACATGESCITFILDDPVGNSFIENPLRYPHLQVNDQRYSVIAYELATSWICCSRVECGLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLJ0</accession>
    <name>V7CLJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Retrotransposon Copia-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G203100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLJ0"/>
    <dbReference type="Gramene" id="ESW31029">
        <property type="protein sequence ID" value="ESW31029"/>
        <property type="gene ID" value="PHAVU_002G203100g"/>
    </dbReference>
    <dbReference type="OMA" id="GCETSAQ"/>
    <dbReference type="OrthoDB" id="1745344at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47481">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47481:SF22">
        <property type="entry name" value="RETROTRANSPOSON GAG DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="107" mass="11991" checksum="D3B6E6803C4A4AFB" modified="2014-02-19" version="1">MASSSTTEPNSETFSAKPFPLPPHIFHTPIPLKLDSENFLVWRQQVNATLRSLDLLYFLDGSCIPPRLISIEEDASPIVNSKYIQYDRQDQAILAWLLASMTAGVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM24</accession>
    <name>V7CM24_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G113800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM24"/>
    <dbReference type="SMR" id="V7CM24"/>
    <dbReference type="STRING" id="3885.V7CM24"/>
    <dbReference type="Gramene" id="ESW29966">
        <property type="protein sequence ID" value="ESW29966"/>
        <property type="gene ID" value="PHAVU_002G113800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QURS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRMQNKV"/>
    <dbReference type="OrthoDB" id="1701699at2759"/>
    <dbReference type="PhylomeDB" id="V7CM24"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048364">
        <property type="term" value="P:root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048367">
        <property type="term" value="P:shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004320">
        <property type="entry name" value="BPS1_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070">
        <property type="entry name" value="OS06G0725500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070:SF75">
        <property type="entry name" value="SELECTION_UPKEEP OF INTRAEPITHELIAL T-CELLS PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03087">
        <property type="entry name" value="BPS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="304" mass="33970" checksum="1BC8657D3DE59778" modified="2014-02-19" version="1">MEDISKYPYVHQPVRSISFPTRAHSVSQRVEALLNHLKHHHSQPVSSTTGLEAETILSDLVVLAEVYNCSEELFHSPQSQQALLRYQDGKLVEEALCGSVTLLDTCESARDLLLVLKEHMQNLHSTVRRRKGDSNIESNISSLDIFKKKAKKTISKQLVQLKRMQNKVNSFSLLDQDQQLAFLARVLRESNTITISVLHSILVFLSMPTFGTKGPSSLISKLKTTVLFSSQKEQKNTNGVADLHNVLCSLFGREKNGDSSGGFQRALGVLETLNVDIEALEGGLDCIFRCLVKNRVSFLNMLVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CML9</accession>
    <name>V7CML9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G158400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CML9"/>
    <dbReference type="Gramene" id="ESW30505">
        <property type="protein sequence ID" value="ESW30505"/>
        <property type="gene ID" value="PHAVU_002G158400g"/>
    </dbReference>
    <dbReference type="OMA" id="GCTEDPP"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="68" mass="7591" checksum="C6F5D738F2FA8F31" modified="2014-02-19" version="1">MGGGGCTEDPPESSTPSPQPPQPRPPRPSRPPRPPNSPRPPRSPRPPRPPRKDVLSTLRRTFKDYYIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP30</accession>
    <name>V7CP30_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G200700g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP30"/>
    <dbReference type="SMR" id="V7CP30"/>
    <dbReference type="STRING" id="3885.V7CP30"/>
    <dbReference type="Gramene" id="ESW31005">
        <property type="protein sequence ID" value="ESW31005"/>
        <property type="gene ID" value="PHAVU_002G200700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HGDFLHC"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901696">
        <property type="term" value="P:cannabinoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.43.10:FF:000004">
        <property type="entry name" value="Berberine bridge enzyme-like 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756332" description="FAD-binding PCMH-type domain-containing protein" evidence="8">
        <location>
            <begin position="26"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="9">
        <location>
            <begin position="73"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW31005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="538" mass="60931" checksum="B0BD8CFA6B191023" modified="2014-02-19" version="1">MKYLSSYFTYVTVIALFFSFQPSSADSHENFVRCLYNYPHITNTISNVVYTQTNSSYSSLLDHTIENHRFSNSSSKPLVIVTPLDVSQIQATIICSQRHGLQIRTRSGGHDYEGLSYVAGVPFVLLDLSNLRQIAVDEENRTAWVQSGATLGELYYRISQKSKTLGFPAGVCATVGIGGHFSGGGYGLMMRKYGIAADNVIDAHIIDVNGNLLDRQAMGEDLFWAIRGGGGASFGVIVAWKVNLVPVPSTVTVFDVSRTLEENATEIIQKWQVVANKLDERIMIRVDIARVNSRQHGKVTIKARFVSLFLGGVEELIPLMQNSLPELGLDRKDCKETSWIGSAVFFNAVLIGTSGNEPPEVMLNRTQLHLWKYKGKSDYVTQPIPVEGLQGLWRLLYEAKVENAQLQFAPYGGRMYEISESEIPFSHRSQYIFHIHYWVTWQEEGDGIAQRHMNFIRREYKYMEPYVSNSPRAAYINYRDLDIGVNNNGYTSYTQASIWGLKYFNNNFKRLAKVKTKVDPKNFFRNEQSIPILSMEEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPA4</accession>
    <name>V7CPA4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exonuclease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G178600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPA4"/>
    <dbReference type="SMR" id="V7CPA4"/>
    <dbReference type="STRING" id="3885.V7CPA4"/>
    <dbReference type="Gramene" id="ESW30741">
        <property type="protein sequence ID" value="ESW30741"/>
        <property type="gene ID" value="PHAVU_002G178600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0304">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSHHAGC"/>
    <dbReference type="OrthoDB" id="1679657at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030014">
        <property type="term" value="C:CCR4-NOT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004535">
        <property type="term" value="F:poly(A)-specific ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039637">
        <property type="entry name" value="CNOT7/CNOT8/Pop2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10797">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="101" mass="11594" checksum="4CE6DA796B4B84A5" modified="2014-02-19" version="1">MQPFLPPNLCDFLQLVKFFFGYKVYDVKHLIRFFLNLHGGLDKVSESLGLDNSCRNSHHAGCDSLVTLHVFNKIKTLYFHTELDLQKHAGVLYGLEIIVTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQH7</accession>
    <name>V7CQH7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RCC1-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G253100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQH7"/>
    <dbReference type="SMR" id="V7CQH7"/>
    <dbReference type="STRING" id="3885.V7CQH7"/>
    <dbReference type="Gramene" id="ESW31618">
        <property type="protein sequence ID" value="ESW31618"/>
        <property type="gene ID" value="PHAVU_002G253100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1426">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEEEWRP"/>
    <dbReference type="OrthoDB" id="5981550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.30">
        <property type="entry name" value="Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058923">
        <property type="entry name" value="RCC1-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009091">
        <property type="entry name" value="RCC1/BLIP-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000408">
        <property type="entry name" value="Reg_chr_condens"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051210">
        <property type="entry name" value="Ub_ligase/GEF_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22870:SF24">
        <property type="entry name" value="REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13540">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25390">
        <property type="entry name" value="WD40_RLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00633">
        <property type="entry name" value="RCCNDNSATION"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50985">
        <property type="entry name" value="RCC1/BLIP-II"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00626">
        <property type="entry name" value="RCC1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50012">
        <property type="entry name" value="RCC1_3"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="RCC1-like" evidence="3">
        <location>
            <begin position="148"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="164"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="216"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="270"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="326"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="380"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="432"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="repeat" description="RCC1" evidence="2">
        <location>
            <begin position="499"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="57737" checksum="1E5C853EC0F5AEDE" modified="2014-02-19" version="1">MDATTSGTPTIQYHNIPDQPITTIVATQLPTFQRQLRHCFGDSSPGEFPLSANPSIVLHVLTSCSLYPQDLAKLEATCSFFKKPANFAPDFDLSLSELAALDMCQKRAIFKPMTTEQQQDLKQRCGGSWKLVLRFLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTKEEWQPRPIRALQGIRIIQATVATGRTMLISDFGQVYAFGKDSFGEAENGIQGSKMVTAPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLCHHTDPNDVEPRPLLGALEHMPVVQIAAGFCYLLCLVCQPSGMSVYSVGCGLGGKLGHGSKTDEKYPRLIEQFQVLNLQPKVVAAGAWHAAVVGQDGRICTWGWGRCGCLGHGNEECESVPKVVEELRDVKAVHVATGDYTTFVVADNGDVYSFGCGESASLGHNPENNEQGDMHANVLSPKLVSSMKEINEKVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELGANHTERGKPERLDIDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR73</accession>
    <name>V7CR73_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G238100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR73"/>
    <dbReference type="SMR" id="V7CR73"/>
    <dbReference type="STRING" id="3885.V7CR73"/>
    <dbReference type="Gramene" id="ESW31435">
        <property type="protein sequence ID" value="ESW31435"/>
        <property type="gene ID" value="PHAVU_002G238100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW31436">
        <property type="protein sequence ID" value="ESW31436"/>
        <property type="gene ID" value="PHAVU_002G238100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0759">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TLWRGAI"/>
    <dbReference type="OrthoDB" id="756301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.40.10:FF:000009">
        <property type="entry name" value="Mitochondrial 2-oxoglutarate/malate carrier protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050391">
        <property type="entry name" value="Mito_Metabolite_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45618">
        <property type="entry name" value="MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="15"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="106"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="10">
        <location>
            <begin position="205"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW31436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="32044" checksum="8628498671E9F2EB" modified="2014-02-19" version="1">MGDEKKPKPAVSGVWTTIKPFVNGGTAGMLATCVIQPIDMIKVRIQLGQGSAAQVTSTMLKNEGVAAFYKGLSAGLLRQATYTTARLGSFKILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRISADEGILALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDSVGLGEAATVLGASSVSGFFAAACSLPFDYVKTQIQKMQPDADGKYPYTGSLDCAAKTLKAGGPFKFYTGFPVYCIRIAPHVMMTWIFLNQIQKYQKGYGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CR98</accession>
    <name>V7CR98_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="21">Cellulose synthase</fullName>
            <ecNumber evidence="21">2.4.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_002G240200g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17 21">
            <text>[(1-&gt;4)-beta-D-glucosyl](n) + UDP-alpha-D-glucose = [(1-&gt;4)-beta-D-glucosyl](n+1) + UDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19929"/>
            <dbReference type="Rhea" id="RHEA-COMP:10033"/>
            <dbReference type="Rhea" id="RHEA-COMP:10034"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18246"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.4.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="21">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="21">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 21">Glycan metabolism; plant cellulose biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 21">Cell membrane</location>
            <topology evidence="2 21">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 21">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="21">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.12" evidence="21"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CR98"/>
    <dbReference type="SMR" id="V7CR98"/>
    <dbReference type="STRING" id="3885.V7CR98"/>
    <dbReference type="Gramene" id="ESW31466">
        <property type="protein sequence ID" value="ESW31466"/>
        <property type="gene ID" value="PHAVU_002G240200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTVZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHELNED"/>
    <dbReference type="OrthoDB" id="2161379at2759"/>
    <dbReference type="UniPathway" id="UPA00695"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000009">
        <property type="entry name" value="Cellulose synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027934">
        <property type="entry name" value="CES_Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14569">
        <property type="entry name" value="zf-UDP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 21" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="16 21" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="12 21" id="KW-0135">Cellulose biosynthesis</keyword>
    <keyword evidence="6 21" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="15" id="KW-0464">Manganese</keyword>
    <keyword evidence="14 21" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 21" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 21" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 21" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 21" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11 21" id="KW-0862">Zinc</keyword>
    <keyword evidence="10 21" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="752"/>
            <end position="773"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="785"/>
            <end position="803"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="823"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="864"/>
            <end position="885"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="905"/>
            <end position="923"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="21">
        <location>
            <begin position="935"/>
            <end position="955"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulose synthase RING-type zinc finger" evidence="23">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="22">
        <location>
            <begin position="75"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="22">
        <location>
            <begin position="128"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="22">
        <location>
            <begin position="78"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="22">
        <location>
            <begin position="128"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="active site" evidence="18">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <feature type="active site" evidence="18">
        <location>
            <position position="674"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="271"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="301"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="442"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="443"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="467"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="RuleBase" id="RU361116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="Pfam" id="PF14569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW31466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="976" mass="110236" checksum="05706E104C17195F" modified="2014-02-19" version="1">MVQSGVPLCNTCGEQVGLDDNGEVFVACHECNFPICKDCFEHELNEDHRVCMKCGTPYEERTKKEEEEDFHEIEVHENQSTMASEISNSQDVGLHARHASSVSTVDSEVHEESGKSFWKNRVESWKGKDKKNKKKKAAPKVENEASVPPEQQMEEKRPTEAAAAPLSVTIPMSKSKIAPYRTVIIMRLIILGLFFHYRVTNPVHSAFPLWLTSIICEIWFAFSWVLDQFPKWFPVNRQTFIDNLSARFEREGETNELAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEYYFSQKIDYLKDKVQPSFVKERRAMKRDYDEYKVRVNAMVAKAQKTPEEGWTMKDGTPWPGNNSRDHPGMIQVFLGHTGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRGSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPEVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPSLPRSSCCCCPSKKSTTDGVYRNAKREELEAAVYNLKEIDNYDDNERSMLISQMSFEKTFGLSTVFIESTLMENGGVPESADPSMLIKEAIHVISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMQCRGWKSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKLLQRMAYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNVASLLFLGLFLSIIITSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAAEDSEFGELYLVKWTTLLIPPTTLIIVNLVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLMASVFSLIWVKINPFVNKVDSETLSETCIAIDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT40</accession>
    <name>V7CT40_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Puromycin-sensitive aminopeptidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G2910000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT40"/>
    <dbReference type="STRING" id="3885.V7CT40"/>
    <dbReference type="MEROPS" id="M01.005"/>
    <dbReference type="Gramene" id="ESW32076">
        <property type="protein sequence ID" value="ESW32076"/>
        <property type="gene ID" value="PHAVU_002G2910000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1046">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MDRINPR"/>
    <dbReference type="OrthoDB" id="10031169at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd09600">
        <property type="entry name" value="M1_APN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1730:FF:000005">
        <property type="entry name" value="Aminopeptidase N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.1840:FF:000001">
        <property type="entry name" value="Aminopeptidase N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2010.30:FF:000002">
        <property type="entry name" value="Putative aminopeptidase N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2010.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="entry name" value="Neutral Protease Domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.50.10">
        <property type="entry name" value="Peptidase M1, alanyl aminopeptidase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1730">
        <property type="entry name" value="tricorn interacting facor f3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045357">
        <property type="entry name" value="Aminopeptidase_N-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042097">
        <property type="entry name" value="Aminopeptidase_N-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038438">
        <property type="entry name" value="PepN_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001930">
        <property type="entry name" value="Peptidase_M1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012779">
        <property type="entry name" value="Peptidase_M1_pepN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024601">
        <property type="entry name" value="Peptidase_M1_pepN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037144">
        <property type="entry name" value="Peptidase_M1_pepN_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035414">
        <property type="entry name" value="Peptidase_M1_pepN_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02414">
        <property type="entry name" value="pepN_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322:SF1">
        <property type="entry name" value="PUROMYCIN-SENSITIVE AMINOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11940">
        <property type="entry name" value="DUF3458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17432">
        <property type="entry name" value="DUF3458_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17900">
        <property type="entry name" value="Peptidase_M1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00756">
        <property type="entry name" value="ALADIPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63737">
        <property type="entry name" value="Leukotriene A4 hydrolase N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55486">
        <property type="entry name" value="Metalloproteases ('zincins'), catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Aminopeptidase N-like N-terminal" evidence="12">
        <location>
            <begin position="64"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M1 membrane alanine aminopeptidase" evidence="9">
        <location>
            <begin position="271"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M1 alanyl aminopeptidase Ig-like fold" evidence="10">
        <location>
            <begin position="476"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase M1 alanyl aminopeptidase C-terminal" evidence="11">
        <location>
            <begin position="594"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="731"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF11940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW32076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="731" mass="82396" checksum="D0355CCE38C5CC0E" modified="2014-02-19" version="1" fragment="single">INFQKKYSPLYSSLPRVKQVSKRLICAVATEDLPKQVEESEMETPKEIFLKDYKKPDYYFDTVDLKFSLGEEKTIVNSKIAVYPRIEGSSSPLVLDGQDVSLVSIQLNGKALKEEDYHLNARHLTIRSPPSGNYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKFTVRIEADKSLYPVLLSNGNLAEQGDLQDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGRNVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVCKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTFLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVKVKTSYNSEAHTFSLNISQEIPSTPGQSVKEPTFIPVAVGLLDSTGKDIPLSSVYHNGTLRSVSNSDQPVCTTVLIVTKNEEEFVFTDIFERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWESGQVLARKLMLSLVDDFQHGKPLVLNPNFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMGVADPDAVHAVRTFIRNQLASELRSEFLSTVENNRSTAEYVFNHSNLARRALKNIAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT71</accession>
    <name>V7CT71_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">histidine kinase</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_002G324900g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="18" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT71"/>
    <dbReference type="SMR" id="V7CT71"/>
    <dbReference type="STRING" id="3885.V7CT71"/>
    <dbReference type="Gramene" id="ESW32464">
        <property type="protein sequence ID" value="ESW32464"/>
        <property type="gene ID" value="PHAVU_002G324900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32465">
        <property type="protein sequence ID" value="ESW32465"/>
        <property type="gene ID" value="PHAVU_002G324900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32466">
        <property type="protein sequence ID" value="ESW32466"/>
        <property type="gene ID" value="PHAVU_002G324900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0519">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AMYGPQS"/>
    <dbReference type="OrthoDB" id="303614at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009884">
        <property type="term" value="F:cytokinin receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043424">
        <property type="term" value="F:protein histidine kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901701">
        <property type="term" value="P:cellular response to oxygen-containing compound"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033554">
        <property type="term" value="P:cellular response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048509">
        <property type="term" value="P:regulation of meristem development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010029">
        <property type="term" value="P:regulation of seed germination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048831">
        <property type="term" value="P:regulation of shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006970">
        <property type="term" value="P:response to osmotic stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd16922">
        <property type="entry name" value="HATPase_EvgS-ArcB-TorS-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd17546">
        <property type="entry name" value="REC_hyHK_CKI1_RcsC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.130:FF:000015">
        <property type="entry name" value="Histidine kinase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.450.350:FF:000001">
        <property type="entry name" value="Histidine kinase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.350">
        <property type="entry name" value="CHASE domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050956">
        <property type="entry name" value="2C_system_His_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006189">
        <property type="entry name" value="CHASE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042240">
        <property type="entry name" value="CHASE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056839">
        <property type="entry name" value="Receiver_AHK4/CRE1_1st"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43719:SF51">
        <property type="entry name" value="HISTIDINE KINASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43719">
        <property type="entry name" value="TWO-COMPONENT HISTIDINE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03924">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24896">
        <property type="entry name" value="Receiver_CRE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01079">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="CheY-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="Homodimeric domain of signal transducing histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50839">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 12" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-0675">Receptor</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="316"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="CHASE" evidence="16">
        <location>
            <begin position="93"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="14">
        <location>
            <begin position="373"/>
            <end position="663"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="15">
        <location>
            <begin position="688"/>
            <end position="818"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="15">
        <location>
            <begin position="843"/>
            <end position="979"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="12">
        <location>
            <position position="893"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW32465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="999" mass="111366" checksum="AEF4C44451B1C8A1" modified="2014-02-19" version="1">MKSEQAGSNGKNTFIQAHRAWLPKLLMLWILLMALIGWCIYTQMDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNLEREAFEKQHGWVIKTMERKSSLVRDEYAPVIFAQETVSYLESIDMMSGEEDRENILRARATGNAVLTSPFKLLGSHHLGVVLTFPVYKSKLPQKPTMEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNFTDPLIMYGKQDEEGDMSLVHESKLDFGDPYRKHKMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYSAGNRIVKVEDDFHKMAELKVRAESADIAKSQFLATVSHEIRTPMNGILGMLGLLLGTELSSTQLDYAQTAQACGMALIALINEVLDRAKIEAGKLDLETVPFDIRSILDDVLSLSSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAENRVPTVNGKIDTFLNGRSEEVVHMSSGGYNFKTLSGYEAADERNSWDNFKHLIADEEFFFDDSVKKVASESYEQVTLMVSVEDTGNGIPFLAQDKIFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGEISFISRPQVGSTFSFSADFGTTKKNSIIDMKKHNLEDLRSSFRGFKAIVVDAKPVRAAVTRYHLKRLGIQAKVANSINKAISLCGKNWSLTSGIFQPDMIFVEKDSWICGEDGIFNVWQLDWKQNGHVFKIPQMILLATNITNTEFDKAKAAGFSDTVIMKPLRASMVAACLQQVMGTGKKRQLGKDTGSTFARSLLCGKKILVVDDNRVNRRVAAGALQNFGANVTCAESGKIALEMLQLPHNFDACFMDIQMPEMDGFQATGKIRDMERKANERLMNGECGEGNGWKNEYHLPILAMTADVIQATYEKCVECGMDGYVTKPFEEENLYQAVAKFFNPKPTSDNSLQNGNRTGKAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT73</accession>
    <name>V7CT73_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G293500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT73"/>
    <dbReference type="STRING" id="3885.V7CT73"/>
    <dbReference type="Gramene" id="ESW32106">
        <property type="protein sequence ID" value="ESW32106"/>
        <property type="gene ID" value="PHAVU_002G293500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVBJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SSLCCTE"/>
    <dbReference type="OrthoDB" id="755659at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36723">
        <property type="entry name" value="F22C12.19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36723:SF1">
        <property type="entry name" value="F22C12.19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="296"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="346"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="352"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="387"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW32106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="660" mass="72203" checksum="A834123BA3A97376" modified="2014-02-19" version="1">MDAVELPLPLDLAPVPKLMGSEGFSLVQNDVASIKTAAEFASCNKFAETQLSKNSSQLPHLKGEEASKNSPSGNGKSCPVISSRVEGVTLQRRAAKSSRSNSSCSKRPRISQPEDSSSPIGIEESKDISDKLGSNNSNCTSPEKSQLPKQKSNASKRGDKRNFKVPSAKAKFESSSMKMGASMFSSTSGGNNFFGLYGLKHDFHDVTKFMNEPLLDELLRGTFDCPILSKDKGKKTSNTSVSFLNSVRKACSILQLPKSVQSQNMSEVDYSSNMKVSTCQLSSVCAAESVGNGDKEQSLDMSSCQKDHCSENESSTSPLDFPLHQPKDVLERLAVHPFQELESLLHDVSKPAATTKNSNNDQRSGKQVSRRPSLPAFPWSHAFGGHSRTNSDAVKSSTSRSMCQGKWSRIGVIAGPTNTDRSSFTNLDSFSYDQSLVPSSGSSEKKNFSSLFANLPFHQLDSSSSVSCSENSQAKAEFGGQVDTKENDERCPRILSAAQTLCEIATHSPRQSSDGILRWQRKTSQKAMKACHYKSNGKLEEMSSRSISTIGSEMVARSVEQIIPSKKPRFSIVENKNSSHYNNDAKKGHFVWPISKSSRSLPSKQVRDSLVENKRTNASILKQHCMMPPPARDLNKVHDGQQQVGKLVVMDWKRGRDNTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUI4</accession>
    <name>V7CUI4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">acetate--CoA ligase</fullName>
            <ecNumber evidence="2">6.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G097800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUI4"/>
    <dbReference type="SMR" id="V7CUI4"/>
    <dbReference type="STRING" id="3885.V7CUI4"/>
    <dbReference type="Gramene" id="ESW33778">
        <property type="protein sequence ID" value="ESW33778"/>
        <property type="gene ID" value="PHAVU_001G097800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33779">
        <property type="protein sequence ID" value="ESW33779"/>
        <property type="gene ID" value="PHAVU_001G097800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1175">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="INVSYNC"/>
    <dbReference type="OrthoDB" id="1706066at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009536">
        <property type="term" value="C:plastid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016208">
        <property type="term" value="F:AMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019427">
        <property type="term" value="P:acetyl-CoA biosynthetic process from acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05966">
        <property type="entry name" value="ACS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.30:FF:000004">
        <property type="entry name" value="Acetyl-coenzyme A synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.12780:FF:000001">
        <property type="entry name" value="Acetyl-coenzyme A synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01123">
        <property type="entry name" value="Ac_CoA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011904">
        <property type="entry name" value="Ac_CoA_lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02188">
        <property type="entry name" value="Ac_CoA_lig_AcsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF001208">
        <property type="entry name" value="PRK00174.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24095">
        <property type="entry name" value="ACETYL-COENZYME A SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24095:SF14">
        <property type="entry name" value="ACETYL-COENZYME A SYNTHETASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyl-coenzyme A synthetase N-terminal" evidence="8">
        <location>
            <begin position="118"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="6">
        <location>
            <begin position="187"/>
            <end position="573"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding enzyme C-terminal" evidence="7">
        <location>
            <begin position="635"/>
            <end position="713"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="751" mass="83678" checksum="721680890F00C026" modified="2014-02-19" version="1">MIPLSHNSVSVHLGGVPRDPLHPIALDPSLNKPSSSLSLFWNCKRKRWKISTTMASNIKTNNFLRHVESMKLMPSGAGHISHLNAVILGDSLATEEDDFVLPSHDFASQANVQSPEQYLKMYKRSIEDPAGFWSEIAAEFYWKQKWGHKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGNLTYTQLLHQVCQLANYLKDNGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALAQRIVDCKPKVVITCNAVKRGPKVLNLKDIVDAAIKDSAQNGVSIDKCLVYENSLATKREDTKWKDGRDIWWQDVVPQYPTSCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKQSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTLFYTAPTLVRSLMRDGDDFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDENGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKAFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHAVKGQGIYAFVTMVDGVQYSEELRKELILTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRVLRKIASRQLDELGDTSTLADPNVVNQLIELADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVU5</accession>
    <name>V7CVU5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G0656001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVU5"/>
    <dbReference type="Gramene" id="ESW33395">
        <property type="protein sequence ID" value="ESW33395"/>
        <property type="gene ID" value="PHAVU_001G0656001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW33395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="19" mass="2260" checksum="5C7FBAF044CE648F" modified="2014-02-19" version="1" fragment="single">MGLKVISNDKSFYENFETH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWR0</accession>
    <name>V7CWR0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Potassium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G099600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Potassium transporter.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWR0"/>
    <dbReference type="STRING" id="3885.V7CWR0"/>
    <dbReference type="Gramene" id="ESW33798">
        <property type="protein sequence ID" value="ESW33798"/>
        <property type="gene ID" value="PHAVU_001G099600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPSA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFHGQLY"/>
    <dbReference type="OrthoDB" id="504708at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003855">
        <property type="entry name" value="K+_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053952">
        <property type="entry name" value="K_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053951">
        <property type="entry name" value="K_trans_N"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00794">
        <property type="entry name" value="kup"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30540:SF83">
        <property type="entry name" value="K+ POTASSIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30540">
        <property type="entry name" value="OSMOTIC STRESS POTASSIUM TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02705">
        <property type="entry name" value="K_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22776">
        <property type="entry name" value="K_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="4 10" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="197"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="221"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="270"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="340"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="388"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="422"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="449"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="478"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="515"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="domain" description="K+ potassium transporter integral membrane" evidence="11">
        <location>
            <begin position="27"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="domain" description="K+ potassium transporter C-terminal" evidence="12">
        <location>
            <begin position="529"/>
            <end position="783"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU321113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF22776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW33798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="785" mass="87588" checksum="7CA8A6BDDAA3B47C" modified="2014-02-19" version="1">MEPESGTSTSRNPSPLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFRGKLLDHHDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAAASSPLKRFLEKHKRLRTALLLVVLFGACMVVGDGVLTPAISVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPQIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITGTEAMYADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSIENSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVAIFVWQKSVFIAIAFLLFFWMIEGVYLSAAFIKVPQGGWVPLVLSFIFMAIMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHRVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAMEPQFSSSEASSSLDGRMAVISSRNLEYASSLIVSEHEDIGVDISIPSSRSLTLRSLQSVYDDESPQVRRRRVRFQLPENPGMNPDVKEELLDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWS6</accession>
    <name>V7CWS6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_001G092900g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWS6"/>
    <dbReference type="SMR" id="V7CWS6"/>
    <dbReference type="STRING" id="3885.V7CWS6"/>
    <dbReference type="Gramene" id="ESW33715">
        <property type="protein sequence ID" value="ESW33715"/>
        <property type="gene ID" value="PHAVU_001G092900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT4B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QELMAGC"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000008">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF51">
        <property type="entry name" value="PEROXIDASE 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 18" id="KW-0349">Heme</keyword>
    <keyword evidence="12 18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="8 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 18" id="KW-0964">Secreted</keyword>
    <keyword evidence="18" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="18">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149129" description="Peroxidase" evidence="18">
        <location>
            <begin position="27"/>
            <end position="328"/>
        </location>
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        <location>
            <begin position="27"/>
            <end position="327"/>
        </location>
    </feature>
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        <location>
            <position position="68"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
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        <location>
            <position position="72"/>
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        <ligand>
            <name>Ca(2+)</name>
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            <label>1</label>
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        <location>
            <position position="74"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
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    <feature type="binding site" evidence="15">
        <location>
            <position position="76"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
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    <feature type="binding site" evidence="15">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
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        <location>
            <position position="89"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
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        <location>
            <position position="165"/>
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        <ligand>
            <name>substrate</name>
        </ligand>
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    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
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        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
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        <location>
            <position position="250"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
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        <location>
            <position position="255"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
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    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="64"/>
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    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="37"/>
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    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="202"/>
            <end position="234"/>
        </location>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW33715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="328" mass="35290" checksum="E5852C8D5C91474B" modified="2014-02-19" version="1">MEISIRILLIMAFLLAFTMLISKGEAQLSQNFYSSSCPNVESIVSQAVTNKFTQTLTTGQATLRLFFHDCFVEGCDASVIISSPNGDAEKDYTENLSLPGDGFDTVIKAKQAVEASCPGVVSCADILSLATRDVISLLGGPSFKVELGRRDGLISKASRVEGNLPKANFNLDQLTSLFQKHGLTQTDMIALSGAHTVGFSHCDQFANRLYSFSSSNPVDPTLDPTYAQTLMAGCPRNPDPTVAIELDPQTPAAFDNIYYQNLVSGKGLLTSDQVLFSDAASQPTVVRFANNAADFNEAFVAAIRKLGRVGIKTGNEGEIRRDCTAFNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXA0</accession>
    <name>V7CXA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Vesicle transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G078100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Membrane</location>
            <topology evidence="1 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the SFT2 family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW33536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7CXA0"/>
    <dbReference type="Gramene" id="ESW33536">
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        <property type="gene ID" value="PHAVU_001G078100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2887">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVREAIW"/>
    <dbReference type="OrthoDB" id="73614at2759"/>
    <dbReference type="PhylomeDB" id="V7CXA0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
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    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007305">
        <property type="entry name" value="Vesicle_transpt_Got1/SFT2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011691">
        <property type="entry name" value="Vesicle_transpt_SFT2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23137:SF29">
        <property type="entry name" value="VESICLE TRANSPORT PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23137">
        <property type="entry name" value="VESICLE TRANSPORT PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04178">
        <property type="entry name" value="Got1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="122"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="17387" checksum="FD187C2EBAD0D0DA" modified="2014-02-19" version="1">MWNIRSLTGGDEEQGESLLGEDSGGLCSLSTTQRIYGFAACFVAGVACMLLSMIVFVKPMKFAVLFTFGNLLAVGSTGFLLGPAQQLGMMFDPVRVFATAIYLGCVVIALICALWIHSKVLTIVAVIVEIGALIWYSLSYIPFARRMVSELMIRLCDTEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZG6</accession>
    <name>V7CZG6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G140700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZG6"/>
    <dbReference type="STRING" id="3885.V7CZG6"/>
    <dbReference type="Gramene" id="ESW34296">
        <property type="protein sequence ID" value="ESW34296"/>
        <property type="gene ID" value="PHAVU_001G140700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRX0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QRERAYI"/>
    <dbReference type="OrthoDB" id="566238at2759"/>
    <dbReference type="PhylomeDB" id="V7CZG6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00158">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.250.10:FF:000038">
        <property type="entry name" value="Rhodanese-like domain-containing protein 9, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="entry name" value="Rhodanese-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044615">
        <property type="entry name" value="STR9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45508">
        <property type="entry name" value="RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45508:SF1">
        <property type="entry name" value="RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="Rhodanese/Cell cycle control phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="63"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="237" mass="25601" checksum="65DF945E0C1CE8CA" modified="2014-02-19" version="1">MAGTGFYASCLSSSSNLGTCWLVLKTHNARALPGKLPGTGMRRLTIKAEVNFVNADKAKELVEVDGYAVLDVRDKNQFERAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFYGLPFTKPNPEFIQSVKSQFPPESKLLVVCQEGLRSAAAANKLEEAGFENIACITSGLQTVKPGTFDSVGSSKLEDAGKAGLVTIQGKISTVLGTILVCAYLFVTFFPDQAEKLFQLAPTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7D015</accession>
    <name>V7D015_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">60S ribosomal protein L17-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_001G261000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D015"/>
    <dbReference type="SMR" id="V7D015"/>
    <dbReference type="STRING" id="3885.V7D015"/>
    <dbReference type="Gramene" id="ESW35742">
        <property type="protein sequence ID" value="ESW35742"/>
        <property type="gene ID" value="PHAVU_001G261000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3353">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QVNHAPC"/>
    <dbReference type="OrthoDB" id="10254664at2759"/>
    <dbReference type="PhylomeDB" id="V7D015"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.470.10:FF:000005">
        <property type="entry name" value="60S ribosomal protein L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="entry name" value="Ribosomal protein L22/L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_A">
        <property type="entry name" value="Ribosomal_uL22_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_uL22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057265">
        <property type="entry name" value="Ribosomal_uL22_arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018260">
        <property type="entry name" value="Ribosomal_uL22_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005721">
        <property type="entry name" value="Ribosomal_uL22_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_uL22_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003260">
        <property type="entry name" value="PRK04223.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01038">
        <property type="entry name" value="uL22_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593:SF47">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL22Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="Ribosomal protein L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00464">
        <property type="entry name" value="RIBOSOMAL_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="154"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="154"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW35742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="20521" checksum="D8FFA2C3B67EBE0A" modified="2014-02-19" version="1">MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKKKGALRSGASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1J5</accession>
    <name>V7D1J5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G231800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1J5"/>
    <dbReference type="STRING" id="3885.V7D1J5"/>
    <dbReference type="Gramene" id="ESW35395">
        <property type="protein sequence ID" value="ESW35395"/>
        <property type="gene ID" value="PHAVU_001G231800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SUXW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPKYPSC"/>
    <dbReference type="OrthoDB" id="1302077at2759"/>
    <dbReference type="PhylomeDB" id="V7D1J5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35094">
        <property type="entry name" value="LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35094:SF3">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01217">
        <property type="entry name" value="PRICHEXTENSN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="173" mass="18499" checksum="3806421AD8479A69" modified="2014-02-19" version="1">MASPTLSLRPQNPTILLFLICISFSYSVQEVIVSSKKLDLDQPLFPPPAETEIKCGSCPCGDTCGEQLPPPPPPTPPPCPSPPPPPPPPPPPPSPPPPPKFPTCPQNCNPLRPPPPPRFVYVPVPGVPKPNTWVYYYSGAENRAVGLLVLAGLGGLSLATLLLDDIMKLNLYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2C6</accession>
    <name>V7D2C6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">glucan endo-1,3-beta-D-glucosidase</fullName>
            <ecNumber evidence="4">3.2.1.39</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">(1-&gt;3)-beta-glucan endohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">Beta-1,3-endoglucanase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_001G230000g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolysis of (1-&gt;3)-beta-D-glucosidic linkages in (1-&gt;3)-beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.39"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
            <topology evidence="2">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 17">Belongs to the glycosyl hydrolase 17 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.39" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2C6"/>
    <dbReference type="SMR" id="V7D2C6"/>
    <dbReference type="STRING" id="3885.V7D2C6"/>
    <dbReference type="Gramene" id="ESW35376">
        <property type="protein sequence ID" value="ESW35376"/>
        <property type="gene ID" value="PHAVU_001G230000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUUJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DFNDMAT"/>
    <dbReference type="OrthoDB" id="941679at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042973">
        <property type="term" value="F:glucan endo-1,3-beta-D-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000002">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1040:FF:000001">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000490">
        <property type="entry name" value="Glyco_hydro_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044965">
        <property type="entry name" value="Glyco_hydro_17_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012946">
        <property type="entry name" value="X8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32227">
        <property type="entry name" value="GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00332">
        <property type="entry name" value="Glyco_hydro_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07983">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00768">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00587">
        <property type="entry name" value="GLYCOSYL_HYDROL_F17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="14 18" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8 18" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="13" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0611">Plant defense</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 19" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004758347" description="glucan endo-1,3-beta-D-glucosidase" evidence="19">
        <location>
            <begin position="17"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="domain" description="X8" evidence="20">
        <location>
            <begin position="359"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00033335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00033417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU004336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="SMART" id="SM00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW35376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="498" mass="54086" checksum="9A5EF3514A8FF944" modified="2014-02-19" version="1">MTKHFLLLLFAVYVAAIDEEPFIGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTGIKVAVSVPNEEILAIGQSNTTAAKWVSRNVVAHYPATNITSICVGSEVLTALPNAAKVLVSALKFIHSALLASNLDHQIKISTPLSSSMIFDSFPPSQAFFNRSLNPVLVPMLEFLQTTGSYLMLNTYPYYDYMKSNGVFPLDYALFKPLPPNKEVIDSNTLLHYSNVFDSVIDAAYFAMAFLNYTNIPVVVSETGWPSKGDSNEPDATVENANTYNSNLIKHVLNVTGTPKHPGIGVSTYIYELYNEDAKAGSLSEKNWGLFDANGKPIYVLQLTESGGVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGEPCYEPDSVVAHANYAFDTYYHQMGKSPQSCDFNDMATISSTNPSHGSCVFPGSLGNNGTFPNVTLSSMNSTNSDSSAWNLHGGELGIRSLLKMILLLLWGVVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2G1</accession>
    <name>V7D2G1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">D-cysteine desulfhydrase</fullName>
            <ecNumber evidence="9">4.4.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G256400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>D-cysteine + H2O = hydrogen sulfide + pyruvate + NH4(+) + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11268"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:35236"/>
            <dbReference type="EC" id="4.4.1.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ACC deaminase/D-cysteine desulfhydrase family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.15" evidence="9"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2G1"/>
    <dbReference type="SMR" id="V7D2G1"/>
    <dbReference type="STRING" id="3885.V7D2G1"/>
    <dbReference type="Gramene" id="ESW35690">
        <property type="protein sequence ID" value="ESW35690"/>
        <property type="gene ID" value="PHAVU_001G256400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPSP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEVYAVM"/>
    <dbReference type="OrthoDB" id="10266364at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019148">
        <property type="term" value="F:D-cysteine desulfhydrase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1100:FF:000081">
        <property type="entry name" value="D-cysteine desulfhydrase 2 mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1100:FF:000050">
        <property type="entry name" value="D-cysteine desulfhydrase 2, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027278">
        <property type="entry name" value="ACCD_DCysDesulf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="TrpB-like_PALP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43780">
        <property type="entry name" value="1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43780:SF7">
        <property type="entry name" value="D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="Tryptophan synthase beta subunit-like PLP-dependent enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW35690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="419" mass="46503" checksum="EF0BF9D04B1FC284" modified="2014-02-19" version="1">MIHSNPLQNQIVTKLKLGGEEFLQKVLNNRRWTLPSPETKIHQLVHTQGPNFLLNTHPSFGDANRVSKERNSFYVVRDDLLHPLVNGNKARKLDGLLPLLQHCSVTDVVTCGGCQSAHTAAVAVMCAERGIVSHLLLRGEQPEILTGYNLMSSMYGNVTYVGRTIYANREEMLKSYAESVAGNNGYVLWFGDIIETSSATELSTSPNLMQMDVSRSEGNHQRKILVVNEGAGDSVALLGVIRLVQYLSQNHLLGKERPMRFVVDAGTGTTAIGLGLAAQCLGLPWEVYAVMLADKIEGYRKQEKRLISEFKKHFNIEFIDHIVNREDAGIVNWVERGRPRKFGNVLEGEVEKCQQIAKQTGILVDPVYTLAAWETAMLLSSNNAEEAEVVLLHTGGTLGMFGLAQRYKNYFGKLKKGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>T2DLW1</accession>
    <name>T2DLW1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">40S ribosomal protein S3-3-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G131900g</name>
    </gene>
    <organism evidence="8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="8">Pod</tissue>
        </source>
    </reference>
    <reference evidence="9" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <dbReference type="EMBL" id="KF033411">
        <property type="protein sequence ID" value="AGV54401.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DLW1"/>
    <dbReference type="SMR" id="T2DLW1"/>
    <dbReference type="STRING" id="3885.T2DLW1"/>
    <dbReference type="Gramene" id="ESW24448">
        <property type="protein sequence ID" value="ESW24448"/>
        <property type="gene ID" value="PHAVU_004G131900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3181">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EYIRPTM"/>
    <dbReference type="OrthoDB" id="10248446at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02413">
        <property type="entry name" value="KH-II_40S_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1140.32:FF:000004">
        <property type="entry name" value="40S ribosomal protein S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.20:FF:000006">
        <property type="entry name" value="40S ribosomal protein S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="entry name" value="Ribosomal protein S3, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057258">
        <property type="entry name" value="Ribosomal_uS3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_uS3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018280">
        <property type="entry name" value="Ribosomal_uS3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005703">
        <property type="entry name" value="Ribosomal_uS3_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003219">
        <property type="entry name" value="PRK04191.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01008">
        <property type="entry name" value="uS3_euk_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760">
        <property type="entry name" value="30S/40S RIBOSOMAL PROTEIN S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11760:SF64">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="Prokaryotic type KH domain (KH-domain type II)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="Ribosomal protein S3 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00548">
        <property type="entry name" value="RIBOSOMAL_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="KH type-2" evidence="7">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="AGV54401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW24448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="242" mass="26724" checksum="F30A2B9616CBA559" modified="2013-11-13" version="1">MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYARPAAAAAAASVLPTTDIEVPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEA6</accession>
    <name>V7AEA6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ER lumen protein retaining receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G026100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ERD2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEA6"/>
    <dbReference type="SMR" id="V7AEA6"/>
    <dbReference type="STRING" id="3885.V7AEA6"/>
    <dbReference type="Gramene" id="ESW03585">
        <property type="protein sequence ID" value="ESW03585"/>
        <property type="gene ID" value="PHAVU_011G026100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3106">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YILLPCI"/>
    <dbReference type="OrthoDB" id="7694678at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046923">
        <property type="term" value="F:ER retention sequence binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006621">
        <property type="term" value="P:protein retention in ER lumen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000133">
        <property type="entry name" value="ER_ret_rcpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10585">
        <property type="entry name" value="ER LUMEN PROTEIN RETAINING RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00810">
        <property type="entry name" value="ER_lumen_recept"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00660">
        <property type="entry name" value="ERLUMENR"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="164"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="193"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW03585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="272" mass="30791" checksum="544635A1D934EF13" modified="2014-02-19" version="1">MRPQRTSIHAVTSWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLTKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDFATFITTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLAVLIHPSTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG89</accession>
    <name>V7AG89_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MOM1 alpha-helical domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G081700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7AG89"/>
    <dbReference type="STRING" id="3885.V7AG89"/>
    <dbReference type="Gramene" id="ESW04275">
        <property type="protein sequence ID" value="ESW04275"/>
        <property type="gene ID" value="PHAVU_011G081700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0384">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIRKKYD"/>
    <dbReference type="OrthoDB" id="1414316at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031507">
        <property type="term" value="P:heterochromatin formation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039322">
        <property type="entry name" value="MOM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056882">
        <property type="entry name" value="MOM1_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35116:SF2">
        <property type="entry name" value="ATP-DEPENDENT HELICASE FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35116">
        <property type="entry name" value="HELICASE PROTEIN MOM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25029">
        <property type="entry name" value="MOM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOM1 alpha-helical" evidence="2">
        <location>
            <begin position="362"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="324"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1271"/>
            <end position="1313"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1700"/>
            <end position="1735"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="328"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1271"/>
            <end position="1289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1711"/>
            <end position="1727"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF25029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1735" mass="191173" checksum="0D2E45E60B62966E" modified="2014-02-19" version="1">MAHDTGSSHVPEKRPMTRSSRETLSKKVAATSSTTPNRKSERLEKRTPPSSVGWMDPKRKTETPSPLRRSERTKHVSPSSASRDSGSRTRQKRHCSGKQLSFEASEDGHDENEERGVEASSRPRTRRVTEHCHVKTNGMDRSTEEGDDGVGGKIDGCLKGNCLDSARDDKDIGLPAGATGKEMKAEPKLSEPVKELSDYDVTVNPLVLSNTASCEPSEAREKVQFDSCKEERSQILGSKDFISNENLIRKRIEHVKDEKSISSKRKRTMMDKHSDASAMLVENNNNSNLFEDTRPSRICSNVVETSGSCSKRIRQISLSDVKKDWRKSTNNVDQPSSKLSTRNKEDSARSQGNTVETDKIRKQQRSLHLLLKPEIANLCEILHLPDDVKSMVQNCLEYTMNNYQICTEPLPILQAFQLSLCLTAAALLNHKLNFQASLLLAKKHLNFDCKKEVVDEINSRLWDLRESFLSLKRNSNFAGYANASESSSGVHPYTEVTPEAELVKTDNSINIRAVQKRKSQWNKLLLMHREEKIKLKKDIENENAEIQRRHQIEWEAVRSCSPNDLVNDGKLLAFKSAYMKRTRELNRQQEIRLKDLEVKQLKTRLMFQESSAPDELFNSIDLDKLGTMVESLQICYQAQHHNALKVLVSDHVAEGKGFNDTVEVTARTESVVGFSEAPDVNASVVAPFGSTVELQTRHGEGCVNFNHESDNDFGQDAIIQVLPSHNEDICHGETLDVLSAEVAPSVCNTSSSENDLVEIPSSRLGELDGTIQIKPVCGSSIEVDANGSNDGAKNMTLLNSQSSNEHIPSVNAMCTPYCENTAQIHDADNNNGSHNADTLNSSFYDERISLRNSKSPQHRVHNENSMLTLDCEKFALDGSGSDNFILNSPLVDERNADRTIVLNRDENVGIHESVNLTSSTEQISGGAVDVSVLDSVLSKPCGADSSSNNSSDANAILSNQSSIEKQSHDGVSSSIPVGQIPGGVSETNDRAIVNVLDGEEANWMPDAVNYPDNVIPQNSSSMDQLANGGPVFDGNLSSGTCTTSPSNSQTLPDEHVSVLMPENSLVEVEFQLTHNVVVDKSATLDQQEGVCTTMTENSLYQETPVSRPVDFMEPLEVESPPDLDAAREVQNYVVFSLVDVVQANQSTNDSLVMETPEEGQFPSAGFLSSNCDLSNMPLMTRTEDQPYNEDDLLDHIPGTLIEIQNQAVVQHPSNSDQQEGVCSTMTENSLSQETPVSISVDDLMEPLEQVQPLSSLESPPDQNTTIEMQNSLVPSSVDTVPANVSTNDSLVMEPPEKEGQLPSAGILSSSDGDLSNLPTVTGTEDQPSNENNFPNHVPETSTMEIQNQVVVQCTSNVELDSSCFSQDVHPASNVDLVSLLHSGVRQQSSNTRNLSTLAAINNHPIQPASQSDPRIIQRLGRDPLNYEVERLHVLTEKNRKGFEERKLQLKSDFEAELEELYRKFDIKHKENEVELQKVRKDLDRQHSIVHVNMKLAEAFKAKSMDFKLSGAPSMQKDASSVQQLFQVASPQNGTRPNMIPSPSSRVYSAASLQTSYGTTTSQTTVPPIQAMYSTPVTFSVGSSRLQHINPLSSRLGNVQTDGEIRAPAPHLHPYRTPTPVPASSFCTVMRGRPSQPAFGNIPVTSLPFSHQTPRPTLATFPSVLQRGVWPPILPAINPRTDPNSQHGIYLPNVRPHMPDLPSMNLSKCDKSSSITRETSAHPATSSDLVCLSDDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHI7</accession>
    <name>V7AHI7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Shugoshin C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G085600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the shugoshin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHI7"/>
    <dbReference type="SMR" id="V7AHI7"/>
    <dbReference type="STRING" id="3885.V7AHI7"/>
    <dbReference type="Gramene" id="ESW04323">
        <property type="protein sequence ID" value="ESW04323"/>
        <property type="gene ID" value="PHAVU_011G085600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYFF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKDYINH"/>
    <dbReference type="OrthoDB" id="770508at2759"/>
    <dbReference type="PhylomeDB" id="V7AHI7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000775">
        <property type="term" value="C:chromosome, centromeric region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034090">
        <property type="term" value="P:maintenance of meiotic sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045144">
        <property type="term" value="P:meiotic sister chromatid segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044693">
        <property type="entry name" value="SGO_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011515">
        <property type="entry name" value="Shugoshin_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34373:SF8">
        <property type="entry name" value="SHUGOSHIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34373">
        <property type="entry name" value="SHUGOSHIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07557">
        <property type="entry name" value="Shugoshin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shugoshin C-terminal" evidence="4">
        <location>
            <begin position="261"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="147"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="232"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="178"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="196"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="232"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="242"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW04323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="287" mass="32904" checksum="E639536831F01A04" modified="2014-02-19" version="1">MNVPAEKMAKKSIGSLMRKKLSDITNNANPHSQQLHSVPSDDNSIQQLLKERTALIQLLAERNKMIEVSGAELKRLRGDVKKLQLQNWNLAQSNSHMLAELNMGRERIKTLQHEILWRAALIKGKNMNVQDKGEIDCEKNPTFVSKLQEGDEEAGQPSTEDSNDEQHKCINRRRIRSKSTGSSTASKNTGKDKAKDNRRRLRRHSTTFKTHEHEPLENLFELEDAYLVTQSGSNTMRSPTSKTERGEKSDLRNEAPRCSFGRPLRRAVQKVHSYKEIPVNIKMRRLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHK6</accession>
    <name>V7AHK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="2">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G087200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHK6"/>
    <dbReference type="SMR" id="V7AHK6"/>
    <dbReference type="STRING" id="3885.V7AHK6"/>
    <dbReference type="Gramene" id="ESW04343">
        <property type="protein sequence ID" value="ESW04343"/>
        <property type="gene ID" value="PHAVU_011G087200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRCCCER"/>
    <dbReference type="OrthoDB" id="1730639at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053238">
        <property type="entry name" value="RING-H2_zinc_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155:SF610">
        <property type="entry name" value="OS01G0755700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14155">
        <property type="entry name" value="RING FINGER DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="10">
        <location>
            <begin position="116"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="191" mass="21003" checksum="3B080CC8D47BE076" modified="2014-02-19" version="1">MNFSYRRLLLQNEDVPISTSMPPFPNAKHVTNASSPQVSLGSSQVSTRPVFTSSVAYVFLILFTTFFFIGFVFLYFQQHSSASDSESRAIRRRAASDSVASKSLAVVAETARQGECAICLEEVGEGGAVKMIAYCKHVFHAECIDRWLEKQVTCPVCRCCCERCGEVESVTVRGGEGEGEDTEVISVTNFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJJ9</accession>
    <name>V7AJJ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Albumin I chain a domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G203800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJJ9"/>
    <dbReference type="Gramene" id="ESW05719">
        <property type="protein sequence ID" value="ESW05719"/>
        <property type="gene ID" value="PHAVU_011G203800g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1388106at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045735">
        <property type="term" value="F:nutrient reservoir activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090729">
        <property type="term" value="F:toxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012512">
        <property type="entry name" value="Albumin_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032000">
        <property type="entry name" value="Albumin_I_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08027">
        <property type="entry name" value="Albumin_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16720">
        <property type="entry name" value="Albumin_I_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57059">
        <property type="entry name" value="omega toxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0960">Knottin</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0708">Seed storage protein</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0758">Storage protein</keyword>
    <keyword evidence="1" id="KW-0800">Toxin</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753484" description="Albumin I chain a domain-containing protein" evidence="6">
        <location>
            <begin position="28"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="Albumin I chain a" evidence="7">
        <location>
            <begin position="75"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW05719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="128" mass="14297" checksum="6E2FA8894032C09A" modified="2014-02-19" version="1">MAFLRLAPLILFFLATSIMFSMKKIEAVDCSGACSPFEMPPCGSRDCRCVPIGLFVGFCIYPVHLSSSVAKVIDEHPNLCHSHEECIKKGSGNFCARYPNHYMDYGWCFNSDSDQLKGFLTMPRAISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJV4</accession>
    <name>V7AJV4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G1890001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJV4"/>
    <dbReference type="Gramene" id="ESW05550">
        <property type="protein sequence ID" value="ESW05550"/>
        <property type="gene ID" value="PHAVU_011G1890001g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="23" mass="2344" checksum="4FDDF423A163A583" modified="2014-02-19" version="1" fragment="single">PAVFLNVTSTATNLSPETAALII</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKG6</accession>
    <name>V7AKG6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G015200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKG6"/>
    <dbReference type="STRING" id="3885.V7AKG6"/>
    <dbReference type="Gramene" id="ESW06044">
        <property type="protein sequence ID" value="ESW06044"/>
        <property type="gene ID" value="PHAVU_010G015200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0595">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MARYGNQ"/>
    <dbReference type="OrthoDB" id="1702496at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010506">
        <property type="term" value="P:regulation of autophagy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045269">
        <property type="entry name" value="Atg1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24348">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24348:SF68">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE ATG1C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Protein kinase" evidence="2">
        <location>
            <begin position="14"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW06044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9489" checksum="79ED343CF0F1919F" modified="2014-02-19" version="1">MAQAVGRSRVVGEYVVGRQIGSGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIYILKRINHPNIICLHDIIQVRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKW1</accession>
    <name>V7AKW1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutaredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G122900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutaredoxin family. CC-type subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKW1"/>
    <dbReference type="SMR" id="V7AKW1"/>
    <dbReference type="STRING" id="3885.V7AKW1"/>
    <dbReference type="Gramene" id="ESW04756">
        <property type="protein sequence ID" value="ESW04756"/>
        <property type="gene ID" value="PHAVU_011G122900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1752">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KGCCMCL"/>
    <dbReference type="OrthoDB" id="418495at2759"/>
    <dbReference type="PhylomeDB" id="V7AKW1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd03419">
        <property type="entry name" value="GRX_GRXh_1_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011905">
        <property type="entry name" value="GlrX-like_pln_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02189">
        <property type="entry name" value="GlrX-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10168">
        <property type="entry name" value="GLUTAREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51354">
        <property type="entry name" value="GLUTAREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="5">
        <location>
            <begin position="50"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW04756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="15640" checksum="871632C4BFFADD73" modified="2014-02-19" version="1">MQQAIPYRSWQPLISSSPTTHFTTINNTTNITPSFVSTKMVPNMVLENAVIVFARRGCCMSHVVNRLLLGLGVNPAMHEVEEHDEVGVVRELEAIVGGNENKMQFPAVFIGGKLFGGLDRVMATHISGELVPILKEARALWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMU1</accession>
    <name>V7AMU1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G1806001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="10" mass="1082" checksum="D03A214455A5B44D" modified="2014-02-19" version="1" fragment="single">AYANSSNNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANB1</accession>
    <name>V7ANB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfotransferase</fullName>
            <ecNumber evidence="3">2.8.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G199800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the sulfotransferase 1 family.</text>
    </comment>
    <dbReference type="EC" id="2.8.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANB1"/>
    <dbReference type="SMR" id="V7ANB1"/>
    <dbReference type="Gramene" id="ESW05671">
        <property type="protein sequence ID" value="ESW05671"/>
        <property type="gene ID" value="PHAVU_011G199800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IVETHES"/>
    <dbReference type="OrthoDB" id="205623at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11783">
        <property type="entry name" value="SULFOTRANSFERASE SULT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulfotransferase" evidence="4">
        <location>
            <begin position="59"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="326" mass="37378" checksum="DF04E9D49AF323D3" modified="2014-02-19" version="1">MASTDRKVANGEDNAVFSLRRERGLASSYLYLFQEFWCPGIAIEGVKSFQKCFQAKHGDVVVASFPKTGTTWLIALTFATVNRQHFSAENHPLLTSNPHTLVSCLEFKIFCDDIHDPVLHLSNMIEPRLFSTHTPFTSLPKSLTESNAKIIYICRNPFDTFVSAWTYFNKIRSTMSLPALELEEAFEMYCNGVVSFGPWWSHMLGFWKESLVRPKKVMFLKYEDLMENVNFHVKKIAEFLGCPFTAEEESDGVIESIIKLCSFEKMKDLEVNISGKLDKIIDNKLFFRKGEIGDWINYFSPSLIQKLSKIIEEKLDGSSLSFKMYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANR0</accession>
    <name>V7ANR0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G089800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANR0"/>
    <dbReference type="STRING" id="3885.V7ANR0"/>
    <dbReference type="Gramene" id="ESW06950">
        <property type="protein sequence ID" value="ESW06950"/>
        <property type="gene ID" value="PHAVU_010G089800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPUK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ILSWMED"/>
    <dbReference type="OrthoDB" id="685075at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053342">
        <property type="entry name" value="Exosome_cofactor/PTGS_suppr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37260">
        <property type="entry name" value="PHOSPHORELAY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37260:SF2">
        <property type="entry name" value="PROTEIN ECERIFERUM 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="375"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="383"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="407" mass="44373" checksum="1D9DB1A746B77144" modified="2014-02-19" version="1">MDVKALAKSKRSHTQHHSKKSHHSHKPKAQSSSSSDPKDPAKNPPGKQQVNEEKKKKSHRSVLPSNWDRYGEEEDDSTPEIASKTLDVVLPKSKGADYRHLVAEAQSHAETSLEGFPAFDDLLLGEFGVGLSSMLASRGEGIILWNGDDNFVVEDKTSGNQEASFLSLNLLALADNFAKVDLSKRLFIESDLLSTELCAEELAVNSNEEHKELETKEDNELANSMSKEFNLDNRAADQFAPSSSSSSSPASSTFPLSNDFNIPVNSVIAEFQQASSSGKHKAFVLSSDSSLHSTEHMRGKQYSTFEAAAAEKELDMLLDSPVSLGVSSGYPPQILKKDPVSSKIASITASLDDALDDLLEETSTVIKPNVLLLPQEEKPVNHSMKSSSHPGSKSKVTDDFDSWFDTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7APF3</accession>
    <name>V7APF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Auxin efflux carrier family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G051500g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the auxin efflux carrier (TC 2.A.69.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APF3"/>
    <dbReference type="STRING" id="3885.V7APF3"/>
    <dbReference type="Gramene" id="ESW06483">
        <property type="protein sequence ID" value="ESW06483"/>
        <property type="gene ID" value="PHAVU_010G051500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2722">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECSAIML"/>
    <dbReference type="OrthoDB" id="191139at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080162">
        <property type="term" value="P:endoplasmic reticulum to cytosol auxin transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_transp_PIN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045033">
        <property type="entry name" value="PILS1/3/4/5/7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31651">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31651:SF44">
        <property type="entry name" value="AUXIN EFFLUX CARRIER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="296"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="328"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="362"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="395"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="420" mass="46249" checksum="DB9F044237A8CC2E" modified="2014-02-19" version="1">MDFWMLFFVAFTSIMKLLLITVLGALLAHHRFNILRENATKHINAMVYFVFTPALIYSGISNTLTIKSMVMLWFMPLSILVTYITGTFAGWLMIKTIRVPPHLHGLVLGCCAAGNLASFPLIIVPTICEDKNNPFGDEAICHRNGLAYASLSMAVGYTYSWCFTFNVVRIYSPKIDAVKVDESSINPKSTTETGPKNLLKCPCGALVMNEDTEKLNGGTDPPKFECKVANGQEKVPEKLKFMKWLKLLAEKIKKMKTLIAPSTIAAILGLTIGIVPQFRKLLVGDKAIFNVVQDTLIMLGDASVPTMVLLLGANLVKGLKAIGQQVPLIVGIIVVKFVVLPVIGICIVKSAVHFNLIRHDPLYQFVLLLQYVVPPAMVVSTITQMFGVGECECSAIMLATYSCAAVLLPLWCTLFMWLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7APW6</accession>
    <name>V7APW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="18">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="24" type="ORF">PHAVU_010G031900g</name>
    </gene>
    <organism evidence="24 25">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="25" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="25">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="18"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APW6"/>
    <dbReference type="SMR" id="V7APW6"/>
    <dbReference type="STRING" id="3885.V7APW6"/>
    <dbReference type="Gramene" id="ESW06251">
        <property type="protein sequence ID" value="ESW06251"/>
        <property type="gene ID" value="PHAVU_010G031900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQEW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GGWTPVW"/>
    <dbReference type="OrthoDB" id="1930390at2759"/>
    <dbReference type="PhylomeDB" id="V7APW6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000237">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000013">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000059">
        <property type="entry name" value="S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.30:FF:000001">
        <property type="entry name" value="Serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051343">
        <property type="entry name" value="G-type_lectin_kinases/EP1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47976">
        <property type="entry name" value="G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47976:SF15">
        <property type="entry name" value="G-TYPE LECTIN S-RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE RLK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 18 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0430">Lectin</keyword>
    <keyword evidence="12 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 18 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-0675">Receptor</keyword>
    <keyword evidence="25" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 18" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 21" id="KW-0732">Signal</keyword>
    <keyword evidence="4 18" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755829" description="Receptor-like serine/threonine-protein kinase" evidence="21">
        <location>
            <begin position="26"/>
            <end position="812"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="456"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="23">
        <location>
            <begin position="38"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="519"/>
            <end position="794"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="549"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="23">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="EMBL" id="ESW06251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="812" mass="91306" checksum="D85F5231F75EB4FC" modified="2014-02-19" version="1">MASPLIPFLFLSIILLPFQLITVVAQTKTNLAIGDSYTAAKSTTPWLVSSPSGDFAFGFLPLEDSPDHFILCIWYAKIQGNTIVWFANREKPAPKDSKVELTANDGLVLTAPNGDKLWNTGTSVTVSRGLFNDTGNFVLQDGDSNSAWESFKDYRNTLLPYQTLQRGQKLSSMLRENDFNRGRFELFFQNDGNLVMHSLNLPSGYSNENYYETGTIESNTSSAGTQLVFDSSGDMYILRANNERYNLSEEGVGVSTTQFYLRATLDFYGVFTLYRHPKGSSGSGGWTPVWSYPDNICKNYLAAASSGVCGYNSICSLRDDKRPTCQCPKWYSLADPSDPYGSCKPDFVQECFEGDLSKRKDLYEFEVLTDTDWPLSDYELQRPFNEDQCKQSCMEDCMCYVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLITPLITVKNNRNTLILVLSVLFGTSAFLNLILVCAICMSTCYVFKYKKRLRRHGKSGTTVGTNLRCFTYEELEEATDGFGKVLGKGAFGVVYEGVVNIGSVTRVAVKRLNTFLLEEVQKEFKNELNIIGLTHHKNLVRLLGFCETDSERLLVYEYMGNGTLASLLFNVEKPSWKLRLQIASGVARGLLYLHEECITQIIHCDIKPQNILLDDYYVARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGMVLLEIVSCRKSVEFDEEDESRAILSEWAYDCYSEGSLHTLVEGDKEALDDMKTVEKLVMIALWCVQEDPGFRPTMRNVTQMLEGVVEVEVPPCPSQVSIQYSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7APY7</accession>
    <name>V7APY7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G153300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the cytochrome c oxidase subunit 5B (TC 3.D.4.11) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APY7"/>
    <dbReference type="SMR" id="V7APY7"/>
    <dbReference type="STRING" id="3885.V7APY7"/>
    <dbReference type="Gramene" id="ESW07722">
        <property type="protein sequence ID" value="ESW07722"/>
        <property type="gene ID" value="PHAVU_010G153300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3352">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEAIMPI"/>
    <dbReference type="OrthoDB" id="10249250at2759"/>
    <dbReference type="PhylomeDB" id="V7APY7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005740">
        <property type="term" value="C:mitochondrial envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045277">
        <property type="term" value="C:respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006123">
        <property type="term" value="P:mitochondrial electron transport, cytochrome c to oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00924">
        <property type="entry name" value="Cyt_c_Oxidase_Vb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.11.10:FF:000002">
        <property type="entry name" value="Cytochrome c oxidase subunit Vb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.11.10">
        <property type="entry name" value="Cytochrome c oxidase, subunit Vb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002124">
        <property type="entry name" value="Cyt_c_oxidase_su5b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036972">
        <property type="entry name" value="Cyt_c_oxidase_su5b_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10122:SF0">
        <property type="entry name" value="CYTOCHROME C OXIDASE SUBUNIT 5B, ISOFORM A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10122">
        <property type="entry name" value="CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01215">
        <property type="entry name" value="COX5B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57802">
        <property type="entry name" value="Rubredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51359">
        <property type="entry name" value="COX5B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00061018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR602124-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="17844" checksum="EA940540466E2F5D" modified="2014-02-19" version="1">MLRRFLYSHLKTLAAASSSSLTSRSASAAARFPALSRSSRYFSTQSEDVTAIKKKVEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAIVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFALEVVGPGGPPDGHGDDDHHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQH3</accession>
    <name>V7AQH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G049800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AB hydrolase superfamily. Lipase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQH3"/>
    <dbReference type="SMR" id="V7AQH3"/>
    <dbReference type="STRING" id="3885.V7AQH3"/>
    <dbReference type="Gramene" id="ESW06461">
        <property type="protein sequence ID" value="ESW06461"/>
        <property type="gene ID" value="PHAVU_010G049800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4569">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DVAMCHD"/>
    <dbReference type="OrthoDB" id="426718at2759"/>
    <dbReference type="PhylomeDB" id="V7AQH3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047714">
        <property type="term" value="F:galactolipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008970">
        <property type="term" value="F:phospholipase A1 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31403:SF54">
        <property type="entry name" value="PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31403">
        <property type="entry name" value="PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Fungal lipase-type" evidence="10">
        <location>
            <begin position="182"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="17"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="47362" checksum="1A5EDA0C8742BB53" modified="2014-02-19" version="1">MKLGVRVGSIQPHAPPSISQSNTSPSFKSNISSQFNKSLRPWNQLKLHSAKCNFPNLRNKWKQYQGINHWEGLLDPLDDNLRWEILRYGHFVDATYTSFDFDPSSLTYAKSLYSKKSLLKKCGLGKYGYRISKYLYVTCGIHMPKCINKIFKKLFTRSSLIGYVAICVNEKEITRLGRRDIVVSLRGTITCLEWLENLRVFLTHLPGVVKGEDDVGPMVQKGFLSLYTSKITPHGSLQEMIRKEIGRLIQRYTNEPLSLTLTGHSLGAALAILSAYDITTTFNNAPMVTVISFGGPRVGNGSFRNQLEQKGIKILRIVNSDDVVTKVPGLFVNFDEVVSDEDVGVGIWSKWFYKYIQNMKLVYVDIGQELRLSSREFPCLNKTDVAMCHDLKTYLHLVKNFVSSSCACKHTKIHSIQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASC1</accession>
    <name>V7ASC1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G048700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion outer membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AAA ATPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASC1"/>
    <dbReference type="SMR" id="V7ASC1"/>
    <dbReference type="STRING" id="3885.V7ASC1"/>
    <dbReference type="Gramene" id="ESW08474">
        <property type="protein sequence ID" value="ESW08474"/>
        <property type="gene ID" value="PHAVU_009G048700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0737">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10254455at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005741">
        <property type="term" value="C:mitochondrial outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd19520">
        <property type="entry name" value="RecA-like_ATAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000538">
        <property type="entry name" value="ATPase family AAA domain-containing protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051701">
        <property type="entry name" value="Mito_OM_Translocase_MSP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45644">
        <property type="entry name" value="AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45644:SF3">
        <property type="entry name" value="FI08533P-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="3" id="KW-1000">Mitochondrion outer membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="13"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="AAA+ ATPase" evidence="8">
        <location>
            <begin position="118"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="392" mass="43345" checksum="EA6BD9F91E81DE37" modified="2014-02-19" version="1">MGGSSETKFLQDLLLYAASAALSCLVLFAGLRHLDPNREASKKVLEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFNSIGGLETIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERTEILKVILKGERVEDNIDFGHIAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRTPAPRPLSQLDLEKALATSQKTKVAASEYAGFSLQSPSRWSVPGESGDSQIQAAINEFSKLVVSHMINLQPESQDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU87</accession>
    <name>V7AU87_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G158400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU87"/>
    <dbReference type="SMR" id="V7AU87"/>
    <dbReference type="STRING" id="3885.V7AU87"/>
    <dbReference type="Gramene" id="ESW07781">
        <property type="protein sequence ID" value="ESW07781"/>
        <property type="gene ID" value="PHAVU_010G158400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DPINDDC"/>
    <dbReference type="OrthoDB" id="690068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080090">
        <property type="term" value="P:regulation of primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054502">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052610">
        <property type="entry name" value="bHLH_transcription_regulator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959">
        <property type="entry name" value="BHLH TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45959:SF8">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22754">
        <property type="entry name" value="bHLH-TF_ACT-like_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="7">
        <location>
            <begin position="125"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="87"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="164"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="89"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="310" mass="34549" checksum="E5CCFF93A21F058B" modified="2014-02-19" version="1">MEEDSCNNNSHLHMEMDFFDNNDFDDFFSDIIFHQTPPPTPFSSGSESDHSFRASSFLPSAAVNAAASKRSSPRTYILSFDNSTVVPATPEPSLPSSPLPAKRALHSQNPTTRPNQGSKRSRTSSQTIDHIMAERRRRQELTERFIALSATIPGLSKTDKASVLRAAIDYVKQLKEKVQELEKESRKSAEETVILVNKSNPNGNEEITNSSTETNCSILPEMEARVLGKEVLIEIHCEKEYGVELKILDHLENLHLCVTGSSVLPFGNSALCITITAQMDEERQMTVNEVVRNLREVLSVSHLVSDSDPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVF5</accession>
    <name>V7AVF5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine hydroxymethyltransferase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G0264001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + glycine + H2O = (6S)-5,6,7,8-tetrahydrofolate + L-serine</text>
            <dbReference type="Rhea" id="RHEA:15481"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="EC" id="2.1.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVF5"/>
    <dbReference type="STRING" id="3885.V7AVF5"/>
    <dbReference type="Gramene" id="ESW08191">
        <property type="protein sequence ID" value="ESW08191"/>
        <property type="gene ID" value="PHAVU_009G0264001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2467">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIDQIES"/>
    <dbReference type="OrthoDB" id="1425006at2759"/>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049943">
        <property type="entry name" value="Ser_HO-MeTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680:SF7">
        <property type="entry name" value="SERINE HYDROXYMETHYLTRANSFERASE 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Serine hydroxymethyltransferase-like" evidence="4">
        <location>
            <begin position="82"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW08191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="211" mass="23660" checksum="46CEF9F877FC10EF" modified="2014-02-19" version="1" fragment="single">MEPGLSLGLSASSTAAPLSDTSVPWRFRHLKEEEEEEDNGETINFMDQRVKRKIEGHQQPCFPSKRVAMDSSVGWWNQPLGVADPQIFEIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLSNKYSEGMPGAKYYTGNQYIDEIELLCCQRALLAFDLHPNNWGVNVQPYSCTSANFAVYTGILHPGDRIMGMDSPSGGHLSHGYYTHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYK2</accession>
    <name>V7AYK2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4408 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G232000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYK2"/>
    <dbReference type="STRING" id="3885.V7AYK2"/>
    <dbReference type="Gramene" id="ESW10717">
        <property type="protein sequence ID" value="ESW10717"/>
        <property type="gene ID" value="PHAVU_009G232000g"/>
    </dbReference>
    <dbReference type="OMA" id="SILRHRM"/>
    <dbReference type="OrthoDB" id="1685070at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025520">
        <property type="entry name" value="DUF4408"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008480">
        <property type="entry name" value="DUF761_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33098">
        <property type="entry name" value="COTTON FIBER (DUF761)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33098:SF57">
        <property type="entry name" value="DUF4408 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14364">
        <property type="entry name" value="DUF4408"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05553">
        <property type="entry name" value="DUF761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4408" evidence="3">
        <location>
            <begin position="7"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="211"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="264" mass="30130" checksum="BD96047BBBB72B4E" modified="2014-02-19" version="1">MTPTPSSVYALMATWFTPSYLFIFINLVIGTIAITSRFTNTTKRQRQHQLLRSPSLLDRFSSFRYHKHEPTPTLTPHNVALEPVRTLESPPAVSIISFGPSLDTPEIEEDDQIQSNNSPQLDRVPSSSSLLDRIRSFSFHKERERSEPVQNPDIGMKLVRTPSLMERVRCFSLDLCKVQNESCDSVEQPLSRAPSFLQRLKSLSFNRSESESEVADGGELVEEREGEEGVDAKADDFINRFRQQLRLQRLDSILRCRDMLRGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZ16</accession>
    <name>V7AZ16_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G218800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZ16"/>
    <dbReference type="SMR" id="V7AZ16"/>
    <dbReference type="Gramene" id="ESW10545">
        <property type="protein sequence ID" value="ESW10545"/>
        <property type="gene ID" value="PHAVU_009G218800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LHIQNHK"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035251">
        <property type="term" value="F:UDP-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000056">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050481">
        <property type="entry name" value="UDP-glycosyltransf_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48048">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48048:SF81">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="467" mass="51779" checksum="5987F5BAF0535CF3" modified="2014-02-19" version="1">MTRYEVVFIATPALGNLVPLVQFANLLTKHDPRFSATVLTIFMPQRPRINAYVQARASSPSNLRILHLPTVDPPPPDQYQSSIAFLSLHIQNHKHHVKNAILSLLPSDSNSTDSVRLAAVFVDMFCTTLIDVAAELAVPCYLYFASPASFLGLTLHLPRADSLDSEEFSIPCFENPLPRSALPNLVLDANDASSWFSYHARRYRETKGIVVNTLGELEPHALQSLHDDSLLPRVYPIGPVLDLAGSAQWDPNPVQYKRIMEWLDRQPAGSVVLLCFGSMGSMRANQVEEIAIGLERAGFRFLWVLREPPKAQLEDPTDYLNEVDVLPDGFLKRTAGMGLVCGWVPQAKVLSHEAIGGFVSHCGWNSILESLWHGVVIATWPVYAEQHLNAFQMIKELGLAVEISTDCRVGGDLVRAEAVEKGVRSLMEGSDEIRRKVKEMSEKCKSALIEDGSSYKNLVSLVQELTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1J1</accession>
    <name>V7B1J1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Omega-hydroxypalmitate O-feruloyl transferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G200300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the plant acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1J1"/>
    <dbReference type="SMR" id="V7B1J1"/>
    <dbReference type="STRING" id="3885.V7B1J1"/>
    <dbReference type="Gramene" id="ESW10331">
        <property type="protein sequence ID" value="ESW10331"/>
        <property type="gene ID" value="PHAVU_009G200300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV0F">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EFMRIEE"/>
    <dbReference type="OrthoDB" id="671439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050317">
        <property type="entry name" value="Plant_Fungal_Acyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642:SF50">
        <property type="entry name" value="F21B7.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31642">
        <property type="entry name" value="TRICHOTHECENE 3-O-ACETYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="460" mass="51796" checksum="47247C0CC2CF24CC" modified="2014-02-19" version="1">MASPWVQELHLHHLSIPVTVDRMFSVMPSRPIPVKHGDSLYLSNLDDMIGARVFTPTVYFYQLDNTSSSQKPVTKILQCALADVLVPYYPLSGRLRETGNGKLEVFFGAEQGALIVEARSDIALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMLVIDPEPCWDREIFRPRDPPVVKFPHLEFMRIEEGSNLTMTLWETKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPVDYELRLTFSVNARHKLRKGAVKEGFYGNVVCVACTRSSVSELVHGELPETTLLVREARQSVSEEYLRSTVDYVEVDRPRKLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEPDSSDASMIVCICLPDSAAQKFTQALLLHSDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2Z3</accession>
    <name>V7B2Z3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">[histone H3]-lysine(4) N-trimethyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.354</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_009G241600g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-lysyl(4)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:60260"/>
            <dbReference type="Rhea" id="RHEA-COMP:15537"/>
            <dbReference type="Rhea" id="RHEA-COMP:15547"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
            <dbReference type="EC" id="2.1.1.354"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:60272"/>
            <dbReference type="Rhea" id="RHEA-COMP:15537"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:60268"/>
            <dbReference type="Rhea" id="RHEA-COMP:15540"/>
            <dbReference type="Rhea" id="RHEA-COMP:15543"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61929"/>
            <dbReference type="ChEBI" id="CHEBI:61976"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.1.1.354" evidence="2"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2Z3"/>
    <dbReference type="SMR" id="V7B2Z3"/>
    <dbReference type="STRING" id="3885.V7B2Z3"/>
    <dbReference type="Gramene" id="ESW10831">
        <property type="protein sequence ID" value="ESW10831"/>
        <property type="gene ID" value="PHAVU_009G241600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1080">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YCMQVMW"/>
    <dbReference type="OrthoDB" id="308383at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048188">
        <property type="term" value="C:Set1C/COMPASS complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140999">
        <property type="term" value="F:histone H3K4 trimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19169">
        <property type="entry name" value="SET_SETD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003169">
        <property type="entry name" value="GYF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035445">
        <property type="entry name" value="GYF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044570">
        <property type="entry name" value="Set1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037841">
        <property type="entry name" value="SET_SETD1A/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45814">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45814:SF2">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55277">
        <property type="entry name" value="GYF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50829">
        <property type="entry name" value="GYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GYF" evidence="16">
        <location>
            <begin position="252"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="15">
        <location>
            <begin position="1073"/>
            <end position="1190"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="17">
        <location>
            <begin position="1196"/>
            <end position="1212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="846"/>
            <end position="880"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="915"/>
            <end position="974"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="915"/>
            <end position="926"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="964"/>
            <end position="974"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00049129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW10831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1212" mass="134819" checksum="C3E91BE5DA9514DB" modified="2014-02-19" version="1">MVFSTAFLHEGGPFFSRKRPRALDHGHRDIDLHADAGISSDFSFFSSDQNIERCISAGDVPSSSNTDDKVDPDSGMEMSCPSNVNSGYLPVYSTTANISHPEQSFCGYVQQPALVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLIIGISGTRLPTMAVYEQDKSFELAAPLAGNPDSQSVSHSHVNYCSKESNHLNPHSEAFNSLISCQMLREECCWLYEDEKGMKHGPHSINELISWHSRGYLKDSTVIFHSDKKYDTFVLVSVVNALKGDTTGTICRSGSTSNEVGDMVDLISEISENISSQLHMSIMKAGRRVVLDGIIGDIIAEYVTEKKYKRHKLESAAHTPENKMVSKGSAIPSDSATSHILDDRACHESSRLPSASFKAVGSVENFWWSYAVVRKVLLDYCMQVMWNAVFFDTIADYLSSWRKRTIWSHPEPQPSTNGCKYHAEKIESEALAPKPDFSESNADGYNQFGVLTTKRNHPQLFLSPSRFEGGNLLKGQNVSSPYHDYKDLTFILESVENELHLSSKASFADYIRHFVEKEVNKIVPFPEEIISNEVAVSDTCFSDKLADETFVKGTLNDKSLDSVEAGNSFGKSASGSLMSGIFSKAFKELCGYVDDVVEEETDNLPPGIEEKSQPVVIHHNSKFRPSRLVECHPKITEYVATALCRQKLHDEVLEEWKSLFLDSVLNHVFISSSTIKKHFMSDGQEKGETLNSSKENLNGVTSGLGIVKEGAKSSSDVRLVIGKNTYCRKKLSRKELVSSQTVTENNSRPAKKPVAKLRKLVCGDVGEAVEVEIASVKHEKTRRIKGKKDSSSKGRSSVIVNGSSHSDKLSLKNKAGQKVLKVSENVKDVVKSTVKKLSVSTDYSVGEKKVVKSDGSVKEKTTATNKASKSKRKRQMDGTAPSHPPKILKISNGGAYLGTSKQNTVESTKSAKSKELNLCPRSVGCARTSIDGWEWHKWSRSASPAYRARVRGLPSVQNKCIYSENNLSQLPNCKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIREREYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCQPNCYTKVISVEGQKKIFIYAKRHIKAGEEITYNYKFPLEEKKIPCNCSSRKCRGSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7B304</accession>
    <name>V7B304_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative zinc-finger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G013700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="3885.V7B304"/>
    <dbReference type="Gramene" id="ESW11243">
        <property type="protein sequence ID" value="ESW11243"/>
        <property type="gene ID" value="PHAVU_008G013700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4839">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TVLEAWH"/>
    <dbReference type="OrthoDB" id="1922977at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000178">
        <property type="term" value="C:exosome (RNase complex)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019607">
        <property type="entry name" value="Putative_zinc-finger_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039278">
        <property type="entry name" value="Red1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21563">
        <property type="entry name" value="ZINC FINGER C3H1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21563:SF3">
        <property type="entry name" value="ZINC FINGER C3H1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10650">
        <property type="entry name" value="zf-C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative zinc-finger" evidence="2">
        <location>
            <begin position="871"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="247"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="353"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="578"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="691"/>
            <end position="712"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="247"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="608"/>
            <end position="630"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1675" mass="186408" checksum="701AFF7B4F37F3BB" modified="2014-02-19" version="1">MHHHTVNLPPSTTTVPAAVKNLDLPSLPPKTKEEGELSSDADDDAEDNLESLNVQSTPAVVTGSVPLVRKSTLGVQDGSTNVQLQTTTQPTVQKDLKKNQLPPKSSPWIGHVGTDKNLVISFSDDDSGSDHETKGNTSRLDSSIKRTISSLGKVNKLKQTSLPKEVPKGSSLSRTFVSSMTKIPGSNSKGVGSMPLAQGSRARNFNLVNKNLVRTRDQGLVSNDNKLQDLRHQIALRESELKLKAAQHNKENVSVLSKDHSAMNPKKPVVMPSKSTPVSSGPTQFEPTEPARKRLKHSTSNGVSQAVESQQEFPAVKSLLPPKDSTLGNYYPQERNKVDRGQKEIPLCRAEPKSGISRRQPDNNIDNPLENMPRGDVNYGCNQTEKSSRLVNPGVASNQNAVPANRSSDTVSKSFEALSNAVLLNHNGNVNASEHTNVDFQSFFGMEELIDKELEEAQEHRHKCEIEERNALKAYLKAQRSLLEANARCTNLYHKRELYSAKVRSLILSSSGLSWPSGQHQHPDIELDYLPRLGYEMPTSSCQRLAEYNGINNPSFDFNNQGINKRNSNISNHHVTRANLGSEPFGEPDASTSEPLPQRDNYAADENYSPSDELGTSANENEESSLSGHVSNHHCDADYFRKQDSVSKLVDRDTTSNAIFSCDNPEDSLLLEAKLRSELFARFGARAKKRSNSCNEVEPAAERGGENEVGNEKTQVLQKVAVPHSRAEDIDLKGIESHERSVFVDMSENQSQQNIGGNSLIVNHSIGSSVQGDMPCEGHLSTNTLDIPPLIFRSAFSKLRGMFPFNTNQLQSKNMFINANDAPNGNSTSLSSNERKCSNVLAISMPVNIGNLLSDDSSYGHSAAVDPFWPLCMFELRGKCNNDECPWQHAKDYGDENIQHSDSNNAGRLPLHQQNWDGVAKVPECHKATILPTYLVGLDTLKADQFAYKPVVAHRNAQCWQKHFTLTLATSSLLGNGIPVDGPLLNGGNEPIEVHGAWNKQLSSFHWRSGSGAMADSEQSVEMALLILNHEINKVQGVRKALSVLSKALENDPTSVVLWIVYLLIYYGNLKPNDKDDMFLCAVKLCEESYVLWLMYINSQGKLDDRLIAYDTALSVLCQHASANPKDKVHESACILDLFLQMIHCLYISGNVEKAIERTYGIFPTTTKSNEPHHLSLSDILNCLTVSDKCVFWICCVYLVIYRRLPDAVVQKFESEKNLLDIEWPFVNLSEDDKEMAIKLVETAVESIDSFVYNESGKSEVNLRSAQLFSLNHLRCMAALDSRECFRDLLDKYIKLYPSCLELVLASARIQKLNIHVDSFMGFEEAINRWPKEVPGIHCIWNQYIENALHNQRTDLAKEITVRWFQDVWQGQDLPIEGMKITDKGNSCSSFGMGAKFVSDRSSTDHKQIDTMFGFLNLSLYNFFQNDKTAACTAFDKAKSTANFGGLEQCMRKYVMFLVYDALSLKEDGPDGAIKKILELYTDASSQALLVPKVLTRKIVDNIKKPRLQHLISNIISPVTFDCSLLNLILQSWFGSSLLPETTSDPKHLVDFVEAIMEAVPHNFQLAITVCKLLIKQYNSSDSKPASLLFWACSTLVNAILDSMPIPPEYVWVEAAELLHNAMGVEAILDRFYTRALAVYPFSIMLWKYFYKLYMTSGHAKDAVDAAKERGIELD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3F3</accession>
    <name>V7B3F3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G111000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3F3"/>
    <dbReference type="SMR" id="V7B3F3"/>
    <dbReference type="STRING" id="3885.V7B3F3"/>
    <dbReference type="Gramene" id="ESW12422">
        <property type="protein sequence ID" value="ESW12422"/>
        <property type="gene ID" value="PHAVU_008G111000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHTEEGM"/>
    <dbReference type="OrthoDB" id="2018540at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029159">
        <property type="entry name" value="CA109-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038985">
        <property type="entry name" value="OPRN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37904">
        <property type="entry name" value="OS10G0566900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37904:SF2">
        <property type="entry name" value="OS10G0566900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15011">
        <property type="entry name" value="CA109-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="192" mass="22071" checksum="C22754B181CC4740" modified="2014-02-19" version="1">MESIVKKFQSKFRKVREEINRWDELQSCLISQFRNASHIVDRFQLLQNTNNHGVLNCDSGMRDALLEKQIESLNNILVSIRKTLEEFHCIALSLDKIHRDSRQLVNGGFSHLHRKQLQQQVGMKPSLIYCLDSLMFIHEIYNSEYLLKSSVISALSEISLKSSASELGALQQLLVDQSNIHTEEGMLESSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5I3</accession>
    <name>V7B5I3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mei2-like C-terminal RNA recognition motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G167000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5I3"/>
    <dbReference type="SMR" id="V7B5I3"/>
    <dbReference type="STRING" id="3885.V7B5I3"/>
    <dbReference type="Gramene" id="ESW13089">
        <property type="protein sequence ID" value="ESW13089"/>
        <property type="gene ID" value="PHAVU_008G167000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4660">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHQLLYF"/>
    <dbReference type="OrthoDB" id="417481at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007201">
        <property type="entry name" value="Mei2-like_Rrm_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04059">
        <property type="entry name" value="RRM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mei2-like C-terminal RNA recognition motif" evidence="1">
        <location>
            <begin position="112"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="32546" checksum="92F2038DBEECBFA0" modified="2014-02-19" version="1">MLSKHTLNPKAQPFYLKPTQQQHQLLYFSQPICYYIPPSTFGFFPSFHAPTSNRSSHSAKTDRGKSKVCATGDWRCHHKFYKWRVRGEKILESGKVISFPNTFKEAETSSITTVMIRNVPNQFKFDDLLHILDEHCLRQNKSVADPEDWSKFDFVYLPMDWKHVTRSRMSNLGYAFVNFTSPEAAFRFYREFQGLKWDFVRSKKICEINVAQYQGKDNLMRIFQPKVFRCASRDFLPVLFSEGRHGFNRGIKGTYVGNHVWGLPRRTIGNCAFDQKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6E3</accession>
    <name>V7B6E3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF674 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G110700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW12418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_008G110700g"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW12419"/>
        <property type="gene ID" value="PHAVU_008G110700g"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
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    </dbReference>
    <dbReference type="InterPro" id="IPR007750">
        <property type="entry name" value="DUF674"/>
    </dbReference>
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        <property type="entry name" value="OS01G0153900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33103:SF27">
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    </dbReference>
    <dbReference type="Pfam" id="PF05056">
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        <property type="match status" value="1"/>
    </dbReference>
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    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="501" mass="55925" checksum="7E6EF54428CD6B0D" modified="2014-02-19" version="1">MAATKAPSNEQVYKVPLKVLVDRSENKVVFAEASKDFVDVLLSFLALPLGTIARLVAKESNIPPVKLGSLSSLYESVSNLEEEHLWTPTCKEMLLHPRSSMESYYQHLKLNIDDTDPTNYFLCENLDCSRKPSGSLLSIFNNQRCSCGKLMNRIVSPENNTLENGFVKETATFIICDDLSVLPNILVTSLNLLQKLGIKDMDAIEEQTVDISKREVVDLLKLSMISKSPLTDFIFEKKPRVDDFNPINESWFERGEESSDEGRRIVVRALVRKSNKKIMFTGAEEDFADFLFSFLTLPLGGVLHMLEGNSSLGCIDKLHKSISELSPDRYLRSQRLKEELANPKCATQFTISGQILPIGEVSLPVYYCNTFFDGVRHTFALSTSTRTPYYDYDKNVRLEILDGKSSIGDFWIGKGFAKGPSTFMVTDDLVVTPMSSISAVSYLNRSQVPLSDLEERVISVGVKEGLAILKASLTSTSALSNALQQFTKINELENLSTISIL</sequence>
</entry>
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            <fullName evidence="1">Uncharacterized protein</fullName>
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    </protein>
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        <name type="scientific">Phaseolus vulgaris</name>
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            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6X3"/>
    <dbReference type="Gramene" id="ESW12206">
        <property type="protein sequence ID" value="ESW12206"/>
        <property type="gene ID" value="PHAVU_008G093500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SFAY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FEVWSEE"/>
    <dbReference type="OrthoDB" id="1750799at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW12206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="191" mass="19855" checksum="3F9584B12BEB51B2" modified="2014-02-19" version="1">MQFGRSSEIFGEFGEGLEVAAEDGIDEHARVVGGVAGRDVHDVGLHDDGARGGAGVEGCDGAVVGETVIAADHAEANDVALVVQDVEALGADGGREAGDHAHLPERAHIAVAQDDVAALHEVLVGLRVVEAPHHGPHGGDGRRDLLHNGGAALVRRHRVDVVACHRVGDGGGGRRQRGVRHFFEVWSEEGL</sequence>
</entry>
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    <name>V7B874_PHAVU</name>
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        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G224800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B874"/>
    <dbReference type="STRING" id="3885.V7B874"/>
    <dbReference type="Gramene" id="ESW13770">
        <property type="protein sequence ID" value="ESW13770"/>
        <property type="gene ID" value="PHAVU_008G224800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU51">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ESKMQDA"/>
    <dbReference type="OrthoDB" id="1929779at2759"/>
    <dbReference type="PhylomeDB" id="V7B874"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043622">
        <property type="term" value="P:cortical microtubule organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949">
        <property type="entry name" value="GASTRIC MUCIN-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31949:SF20">
        <property type="entry name" value="OS01G0141900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="293"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="498"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="562"/>
            <end position="627"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="207"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="296"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="373"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="444"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="457"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="509"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="575"/>
            <end position="598"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="616"/>
            <end position="627"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="627" mass="66028" checksum="B795D2A137CFBD3D" modified="2014-02-19" version="1">MNRSFIAPESKMQDAFKQRQQQLGALRSSVRAKDRDDELALFLEMRNREKERGDLVLRAAEDFDGAAALGSNLGNSPLFNVPSSMAALVRKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEMESTKTVMSQLGAPTLRPTSLKARLANPPSEHTGRSNLVSKQPASAPGLTSSGGGIRRPSSAGNLSELAGRSNLVSKLPASSPGLTSSVGGTRRSSSSGNLGSRSATPTGRPTLTTVSKSSRPSTPTSRTTIPSTRAMVATTKTSVSSAKPMVSATKAAVSVARTTTVPAAKTTIPSRSSTPLSRSTTPSRSTTRSSTPTTRTTLSASRPTSRASTPTRRPTTPSNVSTVSSLSVKTSSISKSAPVMSRQPITSPGTSPNVKPSPRPWKPSEMPGFSLDAPPNLRTTLPERPLSTTRGRPGAPGARSSSVEPASIGRPRRQSNSPSRGRSSNGISHPTGSSMPAVNRGYSRANDNVSPVVMGTKMVERVINMRKLAPPRLDDKNSSHNLSGKSSSSPDTSGFGRSLSKKSLDMAIRHMDIRRRVPGNLRSSLMTNIPASSMYSVRSGPPRSRTVSISGSPHATSSNASSEVSVNPNGVCLYNSEIDDDIGSERSGQSPASVRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BA51</accession>
    <name>V7BA51_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G221400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BA51"/>
    <dbReference type="Gramene" id="ESW13733">
        <property type="protein sequence ID" value="ESW13733"/>
        <property type="gene ID" value="PHAVU_008G221400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTVV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYSRTIV"/>
    <dbReference type="OrthoDB" id="1612078at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021102">
        <property type="entry name" value="PNGase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056948">
        <property type="entry name" value="PNGaseA_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31104">
        <property type="entry name" value="PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25156">
        <property type="entry name" value="PNGase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12222">
        <property type="entry name" value="PNGaseA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A N-terminal" evidence="1">
        <location>
            <begin position="77"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW13733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="620" mass="70074" checksum="A009ACF663D8D248" modified="2014-02-19" version="1">MGEVSKVLKPESPSFQISRMILLLAMNTERERFVNPFLCFFFLLFMTTLSHSQPDRFIRPLHGSNREYFEVGYPPPSHEPTPSCTHRALHHSFAHTIDSPPYTTSYSPPPRCPGPWSRVVLHFHARCKGEQYDRIAAIWIAGAELFRTSTAEPTADGIFWNIRKDVTRYSSLLAKHNLDLTMMLENIVDNEFTGVYHVTVTLLYYNDYAVKAPVRVPFVPCPEELTFNSISLPNSRSLIQDPGTRNVNESPADLIIPISDDGRRGFWFKVEGEKSSCSRKIQIPRNTYRAVLELYVSFHGNDEFWYSNPPNSYIKANGLATERGNGAYREVYVTIDGQVVGWEIPFPVIFTGGINPLFWEPMVSIGAFDLPSYDIDLTPFLGKVLDGKEHEFGIGVVKGISYWLVNANLHLWLDHESEVVHANPVVHHSPETSIERQEGFRGLDGSFDVDAEKETHITGWVMTSAGNITTTVSQGFSFKNIIKFQHNGTIKTVKQKFKAKKKVKVIDGNGESITKLKVRRRYPLRVVTTTQEFPDGTYRLATDLSHNLNEKHVSGCFVKSITNAQNSKGWIEVKGHSVVSGQASTTQNYSYLDRFRCYSRNVAASNGLIVLDNSTFVCEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB17</accession>
    <name>V7BB17_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G042900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB17"/>
    <dbReference type="SMR" id="V7BB17"/>
    <dbReference type="STRING" id="3885.V7BB17"/>
    <dbReference type="Gramene" id="ESW15087">
        <property type="protein sequence ID" value="ESW15087"/>
        <property type="gene ID" value="PHAVU_007G042900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HHESDGC"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd16454">
        <property type="entry name" value="RING-H2_PA-TM-RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051834">
        <property type="entry name" value="RING_finger_E3_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931:SF3">
        <property type="entry name" value="RING ZINC FINGER-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45931">
        <property type="entry name" value="SI:CH211-59O9.10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="186"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="103"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW15087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="237" mass="26855" checksum="433694B4B8AA17EA" modified="2014-02-19" version="1">MTSASELFHTRRHRLGRNSLDLGFDTELQAADSFRRHYHARRLRHHLERASDRISARSRRTFVSDSVDSEENVRGSLVGSVSERLPVGVILARTRLLQRLRGEPLSRNRQHGRDSVGEDRESESPNEVATGTTLVTDLTSQMGRSQFLQELNKKPPGLTQEALGCLDQEVFSSSETGLESRIMQDCSICLETFTDGDELIRLPCGHKFHSVCLDPWIRSCGDCPYCRRRVVLNTHLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBR6</accession>
    <name>V7BBR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein TIFY</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Jasmonate ZIM domain-containing protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">BS1</name>
        <name evidence="6" type="ORF">PHAVU_007G061400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <reference evidence="5" key="3">
        <citation type="submission" date="2014-09" db="EMBL/GenBank/DDBJ databases">
            <title>BIG SEEDS1 Mediates a Conserved Pathway Determining Seed Size.</title>
            <authorList>
                <person name="Ge L."/>
                <person name="Yu J."/>
                <person name="Wang H."/>
                <person name="Luth D."/>
                <person name="Bai G."/>
                <person name="Wang K."/>
                <person name="Chen R."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="function">
        <text evidence="2">Repressor of jasmonate responses.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="2">The jas domain is required for interaction with COI1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TIFY/JAZ family.</text>
    </comment>
    <dbReference type="EMBL" id="KM668018">
        <property type="protein sequence ID" value="AKN91684.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBR6"/>
    <dbReference type="STRING" id="3885.V7BBR6"/>
    <dbReference type="Gramene" id="ESW15302">
        <property type="protein sequence ID" value="ESW15302"/>
        <property type="gene ID" value="PHAVU_007G061400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWBC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ARIPFQE"/>
    <dbReference type="OrthoDB" id="1934352at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031347">
        <property type="term" value="P:regulation of defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2000022">
        <property type="term" value="P:regulation of jasmonic acid mediated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009611">
        <property type="term" value="P:response to wounding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018467">
        <property type="entry name" value="CCT_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040390">
        <property type="entry name" value="TIFY/JAZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010399">
        <property type="entry name" value="Tify_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33077:SF42">
        <property type="entry name" value="PROTEIN TIFY 4A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33077">
        <property type="entry name" value="PROTEIN TIFY 4A-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09425">
        <property type="entry name" value="Jas_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06200">
        <property type="entry name" value="tify"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00979">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51320">
        <property type="entry name" value="TIFY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="2" id="KW-1184">Jasmonic acid signaling pathway</keyword>
    <keyword evidence="2" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tify" evidence="4">
        <location>
            <begin position="141"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="62"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="290"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="3">
        <location>
            <begin position="92"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="103"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU369065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="AKN91684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW15302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="36864" checksum="1D3EBF1905DFEC88" modified="2014-02-19" version="1">MNAGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSEAIQQVISLKALLEPSDDDSPPHPPPMHHHPHAPQPQANLTQPPPKVPPPEEPAFHAVDDIQKSASSGEKPTETNDTNTNANVASPRGCATSGSFGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVHFTQDDPLHGNASVWSSPCHLPMDKDVLIPVDTTILKVAQADKMVEYPLQYRDKGSLNRDADIDGQASRKMSLQRYREKRKDRGRFKGKKLTAITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVALPIDLNDKDVQEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC51</accession>
    <name>V7BC51_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G282400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC51"/>
    <dbReference type="SMR" id="V7BC51"/>
    <dbReference type="Gramene" id="ESW14453">
        <property type="protein sequence ID" value="ESW14453"/>
        <property type="gene ID" value="PHAVU_008G282400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SD9E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CGGRVCM"/>
    <dbReference type="PhylomeDB" id="V7BC51"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36753">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36753:SF2">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="65" mass="6832" checksum="8F500C1FFB53DE46" modified="2014-02-19" version="1">MCCGGRVCMLCVCLIVVVIAIGMLFGFGVFKHGFHKIKDTVSYCDSCGGAAGGRPFIGYAPPPLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDB4</accession>
    <name>V7BDB4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_007G103900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDB4"/>
    <dbReference type="SMR" id="V7BDB4"/>
    <dbReference type="STRING" id="3885.V7BDB4"/>
    <dbReference type="Gramene" id="ESW15809">
        <property type="protein sequence ID" value="ESW15809"/>
        <property type="gene ID" value="PHAVU_007G103900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0610">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FHPKRGR"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="PhylomeDB" id="V7BDB4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05574">
        <property type="entry name" value="STKc_phototropin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000020">
        <property type="entry name" value="serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000510">
        <property type="entry name" value="serine/threonine-protein kinase D6PKL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000294">
        <property type="entry name" value="Serine/threonine-protein kinase OXI1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="102"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW15809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="471" mass="51948" checksum="531169960B32824A" modified="2014-02-19" version="1">MPPPPSLIPFTELNSLFPPTRTSLSLSLTHNIANSNSIIIAIVVIVRIISDTMHSSAEDDSDNPATTAGAEWTFTARNHAPSSDPCWDAIERGGGTLGLGDLRFVQRVGSGDIGSVYLVELKGSNGCLLAAKVMDKKELVARNKDTRAKVEREILQVVDHPFLPTLYASLDSPRWSCLLTEFCPGGDLHVLRQRQPDKRFHHAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHVMLTDFDLSLKGDDTTSTAQIVFDQDPPGSTSCNENSKNQCALAMSSCMLPNCIVPSVACFHPKRGRRKRSSRCGSVEIVAEPIEIRSTSFVGTHEYLAPEVISGEGHGNGVDWWTLGVFIFELFYGMTPFKGLEHELTLANIVARALEFPKEPMIPGAARDLISQLLVKDSTMRLGSTMGALAIKHHPFFNGVNWALLRCATPPYIPSSDKCKELVRLYNCTNNTIDFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGF7</accession>
    <name>V7BGF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G199100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGF7"/>
    <dbReference type="SMR" id="V7BGF7"/>
    <dbReference type="Gramene" id="ESW16969">
        <property type="protein sequence ID" value="ESW16969"/>
        <property type="gene ID" value="PHAVU_007G199100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTKKHNM"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000013">
        <property type="entry name" value="probable protein phosphatase 2C 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="12">
        <location>
            <begin position="25"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW16969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="429" mass="46185" checksum="EBFC6AB28E931B26" modified="2014-02-19" version="1">MSRTDSSNMKQPPVPLATLIGRELRNGKIEKPFVKFGQAGLAKKGEDYFLIKTDYQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVLSAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPTKKHNMLTSLLFGKKSKNSTNKSTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNTNSGTFRCAVCQADQPSVDGLSVNTGSFFSPPVSKPWEGPLLCTNCQKKKDAMEGKRSSMPSETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ36</accession>
    <name>V7BJ36_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G204200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ36"/>
    <dbReference type="Gramene" id="ESW17028">
        <property type="protein sequence ID" value="ESW17028"/>
        <property type="gene ID" value="PHAVU_007G204200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SB8H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSHDENG"/>
    <dbReference type="OrthoDB" id="1419539at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754995" evidence="1">
        <location>
            <begin position="20"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="98" mass="9892" checksum="07C1E8B2D631B0D1" modified="2014-02-19" version="1">MEKVTKVLVMLAMVVLVCASNVEGGRLLKEEEEDVEQPQNFPGSGGLGGIFPSPSPGFSFTGVGFGPNGFCTFPGGCTPTFPTLPGGGGGSLPVPPHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPT7</accession>
    <name>V7BPT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">HSF-type DNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G171700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the HSF family. Class A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPT7"/>
    <dbReference type="SMR" id="V7BPT7"/>
    <dbReference type="Gramene" id="ESW19988">
        <property type="protein sequence ID" value="ESW19988"/>
        <property type="gene ID" value="PHAVU_006G171700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW19989">
        <property type="protein sequence ID" value="ESW19989"/>
        <property type="gene ID" value="PHAVU_006G171700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0627">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEQSDHH"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000057">
        <property type="entry name" value="Heat shock transcription factor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000232">
        <property type="entry name" value="HSF_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015">
        <property type="entry name" value="HEAT SHOCK TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10015:SF161">
        <property type="entry name" value="HEAT STRESS TRANSCRIPTION FACTOR A-4A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00447">
        <property type="entry name" value="HSF_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00056">
        <property type="entry name" value="HSFDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00415">
        <property type="entry name" value="HSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00434">
        <property type="entry name" value="HSF_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HSF-type DNA-binding" evidence="11">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="348"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="128"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="352"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="374"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00061350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW19989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="386" mass="43877" checksum="F365104A32736ABF" modified="2014-02-19" version="1">MMEEAQGNSSSLPPFLSKTYDMVDDPSTNSIVSWSVTNKSFVVWNPPEFSKDLLPRFFKHSNFSSFIRQLNTYGFRKIDPELWEFANEGFVRGQPHLLKNIHRRKPVHSHSLQNIQVQGSSPLTKSERQSFKDEIRKLKDEKDQILRELERHEQEWGMYEVQLQYSNDRLEQLEKKQENLVSSVSEVLQKPGIALNLLPLTENGDRKRRLPRSGLFSDDDSIEDHMETSSVLPGVNAEGASIFAPNMERFDILESSIMFWENIAHDVQSHVNMDLDETTSCADSPAISSVQLEVEVQPKSPGINVNSESAVAAVPDLDASKESPVGTVPVATGVNDIFWERFLTENPGSENQEVHSERKDSDGRSNAKFWWNIRNVNNPPEQIGHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRN1</accession>
    <name>V7BRN1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Peroxisomal membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G148300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the peroxisomal membrane protein PXMP2/4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRN1"/>
    <dbReference type="STRING" id="3885.V7BRN1"/>
    <dbReference type="Gramene" id="ESW19705">
        <property type="protein sequence ID" value="ESW19705"/>
        <property type="gene ID" value="PHAVU_006G148300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1944">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLGTFFN"/>
    <dbReference type="OrthoDB" id="10267969at2759"/>
    <dbReference type="PhylomeDB" id="V7BRN1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005778">
        <property type="term" value="C:peroxisomal membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007248">
        <property type="entry name" value="Mpv17_PMP22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266">
        <property type="entry name" value="PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266:SF86">
        <property type="entry name" value="PEROXISOMAL MEMBRANE PROTEIN PMP22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04117">
        <property type="entry name" value="Mpv17_PMP22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="185" mass="21019" checksum="0187893ABD8E3C17" modified="2014-02-19" version="1">MGSLVKKGLNNYVKQLQEHPLRTKVITAGVVSAISDVVSQKLSGIQKLQLKRLLLKVLFGAGYIGPFGHFFHLILDKIFKGKRDTKTVAKKVLIEQCTSSPWNNLLFMIYYGLVVEGQPWVNVKAKVRKDYPSVQYTAWTISPVVGWINHKFLPLHFRVVFQSVAAFFWSIYLNLRARSLALTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRY2</accession>
    <name>V7BRY2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G012600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
            <location evidence="1">Centromere</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRY2"/>
    <dbReference type="SMR" id="V7BRY2"/>
    <dbReference type="STRING" id="3885.V7BRY2"/>
    <dbReference type="Gramene" id="ESW20762">
        <property type="protein sequence ID" value="ESW20762"/>
        <property type="gene ID" value="PHAVU_005G012600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RIPAMTE"/>
    <dbReference type="OrthoDB" id="5792673at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000775">
        <property type="term" value="C:chromosome, centromeric region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042054">
        <property type="term" value="F:histone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.280.10:FF:000003">
        <property type="entry name" value="Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.280.10">
        <property type="entry name" value="SRA-YDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025794">
        <property type="entry name" value="H3-K9-MeTrfase_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051357">
        <property type="entry name" value="H3K9_HMTase_SUVAR3-9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007728">
        <property type="entry name" value="Pre-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036987">
        <property type="entry name" value="SRA-YDG_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003105">
        <property type="entry name" value="SRA_YDG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660:SF73">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05033">
        <property type="entry name" value="Pre-SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02182">
        <property type="entry name" value="SAD_SRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00468">
        <property type="entry name" value="PreSET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00466">
        <property type="entry name" value="SRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="PUA domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50867">
        <property type="entry name" value="PRE_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51575">
        <property type="entry name" value="SAM_MT43_SUVAR39_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51015">
        <property type="entry name" value="YDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0137">Centromere</keyword>
    <keyword evidence="3" id="KW-0156">Chromatin regulator</keyword>
    <keyword evidence="2" id="KW-0158">Chromosome</keyword>
    <keyword evidence="4 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YDG" evidence="10">
        <location>
            <begin position="202"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="Pre-SET" evidence="9">
        <location>
            <begin position="424"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="domain" description="SET" evidence="8">
        <location>
            <begin position="488"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="79"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="86"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="100"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW20762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="664" mass="73776" checksum="DE7EB3F7D4BEA03B" modified="2014-02-19" version="1">MEGRIGKNSVPLHGSIDKSKILDVKPLKSLIPIFSMSSQTPPLGQYPSGFSPFFPFGAPQQTPTEVTPNGAATPIRAYRSTPWAGDTSSTMEGFSDQHTSGKKKRGSPKSRSAKLSLDKPKRSQEPPVDLGALVGISPAQKDDGSREMVNFVLMAFDALRRRLCQLEEAKELSLGSVKRADLKACSILMTRGIRTNMRKRVGSAPGVEIGDIFFFRTEMCVVGLHSPSMSGIDVLHIRGEFEEETLAVSIVSSGEYDDDAEDIDVITYTGHGGNFFKKDKHAIDQKLQRGNLALDRSSRELNEIRVIRGIRDAVNPNAKVYVYDGLYKIEDSWIGKAKGGGDVFKYKLARMSGQPSAYSVWKSVQKWKSGSSRTGLILADISNGAESIPVALFNEVDNVKAPIYFNYFHSLRHPKSFSLMQPSNGCTCTKACVPGDLNCACIRRNEGDFPYTGNGVLVNRMQLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDRAKVSELVREGNEYVFDTTRIYGQFKWNYEPRLLEEVNPNESSEDYAMPYPLVISAKSFGNVARFMNHSCSPNVFWQPVVYEENNQSYMHVAFFALRHIPPMTELTYDYGVSRSDHAEGISAAKGRKKCLCQSLKCCGFYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSR3</accession>
    <name>V7BSR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Association with the SNF1 complex (ASC) domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G139600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'-AMP-activated protein kinase beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSR3"/>
    <dbReference type="SMR" id="V7BSR3"/>
    <dbReference type="STRING" id="3885.V7BSR3"/>
    <dbReference type="Gramene" id="ESW19611">
        <property type="protein sequence ID" value="ESW19611"/>
        <property type="gene ID" value="PHAVU_006G139600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1616">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEYKFMV"/>
    <dbReference type="OrthoDB" id="531008at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02859">
        <property type="entry name" value="E_set_AMPKbeta_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.250.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="entry name" value="Immunoglobulins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032640">
        <property type="entry name" value="AMPK1_CBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006828">
        <property type="entry name" value="ASC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037256">
        <property type="entry name" value="ASC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043554">
        <property type="entry name" value="KINB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46316">
        <property type="entry name" value="SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46316:SF2">
        <property type="entry name" value="SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16561">
        <property type="entry name" value="AMPK1_CBM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04739">
        <property type="entry name" value="AMPKBI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01010">
        <property type="entry name" value="AMPKBI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160219">
        <property type="entry name" value="AMPKBI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="E set domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Association with the SNF1 complex (ASC)" evidence="3">
        <location>
            <begin position="202"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="17"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW19611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="294" mass="32714" checksum="B3795CB5EB570C31" modified="2014-02-19" version="1">MGNVNGRDDVNGTPSETEGEEEDDEPAAAATTHGVVDCMSANPGYRAPSDMMGHSPPASPRATQSPFMFTPQVPVVPLQRPDEMHTPSPSWMQTTSGYEDMYSELGIPTMITWSYDGKEVAVEGSWDNWKTRMSLQRSGKDFTIMKVLPSGVYQFRFVVDGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISSFEPPKSPDSSYNNQQLSSEDYAKEPPLVPPYLQMTLLNIPSTNMEIQPLTARPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTQ5</accession>
    <name>V7BTQ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ATP synthase subunit C, plastid</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">ATP synthase F0 sector subunit C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_005G066100g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the ATPase C chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTQ5"/>
    <dbReference type="SMR" id="V7BTQ5"/>
    <dbReference type="STRING" id="3885.V7BTQ5"/>
    <dbReference type="Gramene" id="ESW21382">
        <property type="protein sequence ID" value="ESW21382"/>
        <property type="gene ID" value="PHAVU_005G066100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0232">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QPELMNE"/>
    <dbReference type="OrthoDB" id="1423239at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045259">
        <property type="term" value="C:proton-transporting ATP synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033177">
        <property type="term" value="C:proton-transporting two-sector ATPase complex, proton-transporting domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015078">
        <property type="term" value="F:proton transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015986">
        <property type="term" value="P:proton motive force-driven ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18183">
        <property type="entry name" value="ATP-synt_Fo_c_ATPH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.20.10:FF:000001">
        <property type="entry name" value="ATP synthase subunit c, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.20.10">
        <property type="entry name" value="F1F0 ATP synthase subunit C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000454">
        <property type="entry name" value="ATP_synth_F0_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038662">
        <property type="entry name" value="ATP_synth_F0_csu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10031">
        <property type="entry name" value="ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10031:SF48">
        <property type="entry name" value="ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00124">
        <property type="entry name" value="ATPASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="F1F0 ATP synthase subunit C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5" id="KW-0138">CF(0)</keyword>
    <keyword evidence="7 16" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="9 16" id="KW-0406">Ion transport</keyword>
    <keyword evidence="11 16" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="6 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 16" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="V-ATPase proteolipid subunit C-like" evidence="17">
        <location>
            <begin position="12"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00032869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW21382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="81" mass="8563" checksum="80E7A5B75A101B2E" modified="2014-02-19" version="1">MNSIISATSIIAARLDVGLASFGPRVGQGTTARQAVEGITRQLEAKEKIWGGLLLSLAFMEALTIYGLVVALTLLFANPFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUF9</accession>
    <name>V7BUF9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Peroxisomal membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G085000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peroxisomal membrane protein PXMP2/4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUF9"/>
    <dbReference type="STRING" id="3885.V7BUF9"/>
    <dbReference type="Gramene" id="ESW21613">
        <property type="protein sequence ID" value="ESW21613"/>
        <property type="gene ID" value="PHAVU_005G085000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW21614">
        <property type="protein sequence ID" value="ESW21614"/>
        <property type="gene ID" value="PHAVU_005G085000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1944">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CDVIPVQ"/>
    <dbReference type="OrthoDB" id="430207at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007248">
        <property type="entry name" value="Mpv17_PMP22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266">
        <property type="entry name" value="PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11266:SF16">
        <property type="entry name" value="PROTEIN SYM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04117">
        <property type="entry name" value="Mpv17_PMP22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="356"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="367"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW21614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="378" mass="42070" checksum="69AC7CE9C98B9940" modified="2014-02-19" version="1">MTSVHSTVAPRAFLPSISKPKPRAPHTKSFAGGVVHDFPRFSRSCIFSGNNRAVAANAAGEDLNVISVKSDDITDQQEGVLVSRVEIDGVDSELATRINGFGAKEGLLSLEGFSSSSSTSSSALVGSESEEDVEKLIDRTINATIVLAAGAFAITKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSVGDWIAQCFEGKPLFEFDRARMFRSGIVGFTLHGSLSHYYYYFCEDLFPYKEWWVVPAKVAFDQTAWSAIWNSIYYTVVALLRLDPPISILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTVELVWVTILSTFSNEKSEAKSSESMMPTEVISTTSVQPPEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUR6</accession>
    <name>V7BUR6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_005G090800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast thylakoid membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the PsbQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUR6"/>
    <dbReference type="SMR" id="V7BUR6"/>
    <dbReference type="STRING" id="3885.V7BUR6"/>
    <dbReference type="Gramene" id="ESW21684">
        <property type="protein sequence ID" value="ESW21684"/>
        <property type="gene ID" value="PHAVU_005G090800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVCH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QSCYQET"/>
    <dbReference type="OrthoDB" id="783722at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019898">
        <property type="term" value="C:extrinsic component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009344">
        <property type="term" value="C:nitrite reductase complex [NAD(P)H]"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009654">
        <property type="term" value="C:photosystem II oxygen evolving complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009767">
        <property type="term" value="P:photosynthetic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.290">
        <property type="entry name" value="Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023222">
        <property type="entry name" value="PsbQ-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008797">
        <property type="entry name" value="PSII_PsbQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054099">
        <property type="entry name" value="PSII_PsbQ_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33399">
        <property type="entry name" value="OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33399:SF2">
        <property type="entry name" value="PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05757">
        <property type="entry name" value="PsbQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101112">
        <property type="entry name" value="Oxygen-evolving enhancer protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0793">Thylakoid</keyword>
    <keyword evidence="4" id="KW-0809">Transit peptide</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW21684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="248" mass="28088" checksum="74C99296F0DA4FCE" modified="2014-02-19" version="1">MNHLSVSHFTHLSSLITMAPFTNLHGGVSKTLIPLTCLPNAHNSIKRGQVVGFLGSKTQEEPSECPVQATRRAAAIGLATLVLTWPFNDKISLAKDNGFWVEDHPLPRLTVTNNIANEKTGTRSFLKRGLFMPNIGLKGSVQRIKHYSFDLLAMADLVHADTLNYVRKYLRLKSTIIYYDFDKLISATPVDDEKQQLTDMANKLFDNFERLEEASRNKSLPETQSCYQETEVLLREVMDRMDVLYETI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUW7</accession>
    <name>V7BUW7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G095800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUW7"/>
    <dbReference type="SMR" id="V7BUW7"/>
    <dbReference type="STRING" id="3885.V7BUW7"/>
    <dbReference type="Gramene" id="ESW21739">
        <property type="protein sequence ID" value="ESW21739"/>
        <property type="gene ID" value="PHAVU_005G095800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1124">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PFINMLC"/>
    <dbReference type="OrthoDB" id="2121326at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02947">
        <property type="entry name" value="TRX_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000211">
        <property type="entry name" value="TPR repeat-containing thioredoxin TTL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044534">
        <property type="entry name" value="TTL1-4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46050">
        <property type="entry name" value="TPR REPEAT-CONTAINING THIOREDOXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46050:SF29">
        <property type="entry name" value="TPR REPEAT-CONTAINING THIOREDOXIN TTL4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14559">
        <property type="entry name" value="TPR_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="120"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="496"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="592" mass="65221" checksum="3A26C61FD000946E" modified="2014-02-19" version="1">MSNTLHQHQQNPTLESKRLDPGSQVSRPGHRRSVSAGAPLIYSGCSSLIPTGNICPSGKILKPLLPSRGPNRTDVLGSGTVNYGRGSIMRGGSGTYPVPVAVPAAASPLTVKRALGGSDPEEVKRVGNELYRSGNFAEALALYDRAVAISPGNAACRSNRAAALTALGRLGEAARECHEAVKLDPAYARAHKRLASLYVRFGQVENSRRHLCLAGIQEDQSEEQKLLLLEKHVNRCADSRKFGDWKRVLRESEAAIAVGADFSPQIFACKAEAYLKLHQLEDAESSLLNIPKFEGFPAACSQTKFFGMVGEAYVPFVSAQVEMALGRFENAVVAAEKASTLDYNNVEVGRIVNVVKMVARARSRGNDLFSSGKFSEACSAYGEGLKYDNSNYVLYCNRAICWSKRGLWEQSVQDCNQALNIQPNYTKALFRRAASNSKLERWADVIKDYEALNRELPNDKEVAESLRRAQLALEKSRLVIYGTKFGIEVEEISALDKFKAAIASAAVLVVYFKEASNELCEEISPFINTLCVRYPSVKFIKVDAEECIAIAKSEIIRSVPTFKIYKNGEKVKEMIQPTHQLLEDWIRRSRSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV41</accession>
    <name>V7BV41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">U-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G025800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV41"/>
    <dbReference type="SMR" id="V7BV41"/>
    <dbReference type="STRING" id="3885.V7BV41"/>
    <dbReference type="Gramene" id="ESW20920">
        <property type="protein sequence ID" value="ESW20920"/>
        <property type="gene ID" value="PHAVU_005G025800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HPIQDHA"/>
    <dbReference type="OrthoDB" id="7537227at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000561">
        <property type="entry name" value="ARM repeat superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315:SF238">
        <property type="entry name" value="ARM REPEAT SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315">
        <property type="entry name" value="U BOX DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="3">
        <location>
            <begin position="9"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF25598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW20920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="34097" checksum="9CE314401FFF8BE3" modified="2014-02-19" version="1">MDTKLLTIRTLVSSLTSSSDQTRLAALRHLRRTSNEDPAARPLISAAGAVPLLAGALYSPSHPIQDHAAATLLNLSISDRRPLLSSPTLLPALAHLLSRHATSSAASAVQSAAATLHSLLAVVAEFRPAVGAKPEILHALIGIISDPDSVTRTIKDALKALFGIALYPPSRTTLVRLGAVPVLFDLVAKDKNGTRKVGIIEDATAVIAQIAACEESEDACLKVSGVSRLAMMLCSENGSCSLRTKENAVAALLNLVRYGSERVVGEVRNKVGTLDGISYVQEHGSPKGKSKAVAFFKLLLDGGSSGEIVQDLYPVDPDSGSSCRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="19" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWC4</accession>
    <name>V7BWC4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G1381000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="OMA" id="MAFDHEN"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW22239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="15" mass="1459" checksum="39DF1C22979DDC41" modified="2014-02-19" version="1" fragment="single">MGESSSSGGEAESMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWG5</accession>
    <name>V7BWG5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="3">14-3-3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G0666001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 14-3-3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWG5"/>
    <dbReference type="STRING" id="3885.V7BWG5"/>
    <dbReference type="Gramene" id="ESW21388">
        <property type="protein sequence ID" value="ESW21388"/>
        <property type="gene ID" value="PHAVU_005G0666001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0841">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NICHDIM"/>
    <dbReference type="OrthoDB" id="10260625at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.190.20:FF:000002">
        <property type="entry name" value="14-3-3 protein epsilon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.190.20">
        <property type="entry name" value="14-3-3 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000308">
        <property type="entry name" value="14-3-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023409">
        <property type="entry name" value="14-3-3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036815">
        <property type="entry name" value="14-3-3_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023410">
        <property type="entry name" value="14-3-3_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18860">
        <property type="entry name" value="14-3-3 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00244">
        <property type="entry name" value="14-3-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000868">
        <property type="entry name" value="14-3-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00305">
        <property type="entry name" value="1433ZETA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00101">
        <property type="entry name" value="14_3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48445">
        <property type="entry name" value="14-3-3 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00797">
        <property type="entry name" value="1433_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="14-3-3" evidence="3">
        <location>
            <begin position="8"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with phosphoserine on interacting protein" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with phosphoserine on interacting protein" evidence="2">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000868-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="243" mass="27965" checksum="CE85F89A7B406CC6" modified="2014-02-19" version="1" fragment="single">MATFSKERDNFVYAAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVRRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTAATTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDGTLILQLLRDNLTLWTSDIPEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX80</accession>
    <name>V7BX80_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">PRONE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G168700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX80"/>
    <dbReference type="SMR" id="V7BX80"/>
    <dbReference type="STRING" id="3885.V7BX80"/>
    <dbReference type="Gramene" id="ESW22627">
        <property type="protein sequence ID" value="ESW22627"/>
        <property type="gene ID" value="PHAVU_005G168700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSGR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENGKRDD"/>
    <dbReference type="OrthoDB" id="1053009at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005085">
        <property type="term" value="F:guanyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.2010:FF:000001">
        <property type="entry name" value="Rop guanine nucleotide exchange factor 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.2010:FF:000003">
        <property type="entry name" value="Rop guanine nucleotide exchange factor 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1310:FF:000001">
        <property type="entry name" value="Rop guanine nucleotide exchange factor 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.2010">
        <property type="entry name" value="PRONE domain, subdomain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1310">
        <property type="entry name" value="PRONE domain, subdomain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005512">
        <property type="entry name" value="PRONE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038937">
        <property type="entry name" value="RopGEF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33101">
        <property type="entry name" value="ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33101:SF10">
        <property type="entry name" value="ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03759">
        <property type="entry name" value="PRONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51334">
        <property type="entry name" value="PRONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0344">Guanine-nucleotide releasing factor</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PRONE" evidence="4">
        <location>
            <begin position="79"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="31"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="483"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW22627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="537" mass="60372" checksum="D845A8F052F3EF19" modified="2014-02-19" version="1">MVLAGEQEQEGHKTKLFTFRGIFEGAGRHTKSLSVDTATELDPIEDGAASSRSQGSRPLTDSDKIPKARTVSKEEMAAKEAKEKLLQDMEQMKERFSKLLLGEDMSGGGKGVSSALALSNAFTNLAASIYGEQKRLEPMPAERKAKWRKEIDWLLSVTDYVVEMVPSQQKSKDGSSMEIMTTRQRTDLHMNIPALRKLDAMLIECLDNFKDQNEFYYVSKDSEDSNQDGGRKKNDDKWWLPTPKVPADGLSDSARKFLHYQKDCVNQVLKAAMAINAQILSEIEIPECYIDSLPKNGRASLGDSIYRSITVEFFDPDHFLSTIDLSSEHKILDLKNRFEASIVIWTRKMTQKDGKSGWGSAVSFEKRELFEERAETILLLLKHRFPGLPQSALDISKIQYNRDVGQAVLESYSRILESLAFTVLSRIDDVLQADFQIQCQNIQLAGKRMNSISRPAKEEIDKGSGGGEAPCSMTLSDFMGWGSDQEESTLKKDPFAIPDELYSDEDPKQQKLPHVVTNKKMSYLENLGVSRSPTSRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXR8</accession>
    <name>V7BXR8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G105000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXR8"/>
    <dbReference type="SMR" id="V7BXR8"/>
    <dbReference type="Gramene" id="ESW21858">
        <property type="protein sequence ID" value="ESW21858"/>
        <property type="gene ID" value="PHAVU_005G105000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ERPWYTV"/>
    <dbReference type="OrthoDB" id="6339427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000025">
        <property type="entry name" value="probable polyol transporter 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050814">
        <property type="entry name" value="Myo-inositol_Transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020">
        <property type="entry name" value="PROTON MYO-INOSITOL COTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48020:SF49">
        <property type="entry name" value="SUGAR TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00171">
        <property type="entry name" value="SUGRTRNSPORT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="92"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="208"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="337"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="366"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="395"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="460"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="55"/>
            <end position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW21858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="529" mass="57528" checksum="83BC1D01D518ADB4" modified="2014-02-19" version="1">MGFQQHGNREVGLSGIALGSKNEYKRMHSELPEGDDDVLQQEARRKSTRKYVIACATFASLNNVLLGYDVGVMSGAVIFIKEDLKISEVKEEFLVGILSIVSLLGSLGGGRTSDIIGRKWTMAIAAVIFQMGSLIMTLAPSFSILMIGRLFAGVGIGFGGLIAPIYIAEISPNTSRGFLTTFPEIFINLGILLGYVSNYAFSGFSAHINWRIMLAVGILPSVFIGFALFIIPESPRWLVMQNRIEEARSVLLKTNDSDSEVEERLAEIQQAAGLANCEEYEQKPVWYELLFPSPSLRRMMITGIGIQCFQQISGIDATVYYSPEIFKAAGIEDNAKLLAATVAVGVTKTLFILVAIFLVDKKGRRPLLFVSTIGMTICLFSIGASLSLFPQGSFVIALAILLVCGNVAFFSVGLGPVCWVLTSEIFPLRLRAQASSLGAVGNRVCSGLVAMSFLSVSRAITVAGAFFVFAAISSLAIVFVYMLVPETKGKSLEQIELMFKNEHERQGGEMELADVEVEQLVQNKTILTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXU4</accession>
    <name>V7BXU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G0673001g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXU4"/>
    <dbReference type="STRING" id="3885.V7BXU4"/>
    <dbReference type="Gramene" id="ESW21396">
        <property type="protein sequence ID" value="ESW21396"/>
        <property type="gene ID" value="PHAVU_005G0673001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTVY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SENFCAI"/>
    <dbReference type="OrthoDB" id="429143at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056511">
        <property type="entry name" value="IDM1_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46508:SF2">
        <property type="entry name" value="INCREASED DNA METHYLATION 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46508">
        <property type="entry name" value="PHD FINGER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23209">
        <property type="entry name" value="IDM1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="Acyl-CoA N-acyltransferases (Nat)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="54"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="250"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="254"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW21396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46138" checksum="A240AD4F8AE59453" modified="2014-02-19" version="1" fragment="single">VYSGLQSQVGLVNQVADGISWTLLRCIHDDQKVHSTQWFALKAVCNTKLAVALTIMEECFVSMLDPRTGIHMIPQVLYNWGSEFARLNFQGFYTMVLEKQDVLVSVASIRVHGTAVAEMPLIATCSRYRRQGMCRLLVTAIEEMLTSFKVERLVISAIPDLVETWTKGFGFKPVDDVERKKLNKFNLMIFPGTVFLEKPLHGEMKNEDETGLCDESTQATDESVKVGIGSEGMAITDSLLQDVVNITTANQIEPKSEHEPLDGKNQSDHKAGSDTLRKDNTQPVDTALQAKESTEISSTCFTEEIIQLTVSAGSEKSIEENSVKELGTCNKVEMESDTVRQSSENFCAIKDGAEPSIRVVEDKNIKIGEGQENALQGPFSNLSCKTFLGSNFDTDSSIECSVMYDETAFFGTFAKSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYE5</accession>
    <name>V7BYE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF3700 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G0834000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYE5"/>
    <dbReference type="STRING" id="3885.V7BYE5"/>
    <dbReference type="Gramene" id="ESW21596">
        <property type="protein sequence ID" value="ESW21596"/>
        <property type="gene ID" value="PHAVU_005G0834000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT9K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSHANWA"/>
    <dbReference type="OrthoDB" id="1617609at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024286">
        <property type="entry name" value="DUF3700"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044828">
        <property type="entry name" value="TSJT1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952">
        <property type="entry name" value="ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952:SF2">
        <property type="entry name" value="OS04G0679400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12481">
        <property type="entry name" value="DUF3700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3700" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="62" mass="7075" checksum="A96CD9F71ADF18EA" modified="2014-02-19" version="1" fragment="single">CMFHSEGGLMSFEHPMNKLKAMPRVDSEGAMCGANFKVDKFSRVNSIPRVGSQSNWMEWDQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYJ5</accession>
    <name>V7BYJ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">tRNA (guanine(37)-N1)-methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.228</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">M1G-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">tRNA [GM37] methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">tRNA methyltransferase 5 homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_005G087700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>guanosine(37) in tRNA + S-adenosyl-L-methionine = N(1)-methylguanosine(37) in tRNA + S-adenosyl-L-homocysteine + H(+)</text>
            <dbReference type="Rhea" id="RHEA:36899"/>
            <dbReference type="Rhea" id="RHEA-COMP:10145"/>
            <dbReference type="Rhea" id="RHEA-COMP:10147"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:73542"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="EC" id="2.1.1.228"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Mitochondrion matrix</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Nucleus</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="10">Predominantly in the mitochondria and in the nucleus.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the TRM5 / TYW2 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.228" evidence="10"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYJ5"/>
    <dbReference type="SMR" id="V7BYJ5"/>
    <dbReference type="STRING" id="3885.V7BYJ5"/>
    <dbReference type="Gramene" id="ESW21646">
        <property type="protein sequence ID" value="ESW21646"/>
        <property type="gene ID" value="PHAVU_005G087700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2078">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WQMTEVL"/>
    <dbReference type="OrthoDB" id="408788at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005759">
        <property type="term" value="C:mitochondrial matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052906">
        <property type="term" value="F:tRNA (guanine(37)-N1)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070901">
        <property type="term" value="P:mitochondrial tRNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002939">
        <property type="term" value="P:tRNA N1-guanine methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02440">
        <property type="entry name" value="AdoMet_MTases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.110:FF:000001">
        <property type="entry name" value="tRNA (guanine(37)-N1)-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000225">
        <property type="entry name" value="tRNA (guanine(37)-N1)-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.110">
        <property type="entry name" value="Met-10+ protein-like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03152">
        <property type="entry name" value="TRM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030382">
        <property type="entry name" value="MeTrfase_TRM5/TYW2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056743">
        <property type="entry name" value="TRM5-TYW2-like_MTfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056744">
        <property type="entry name" value="TRM5/TYW2-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025792">
        <property type="entry name" value="tRNA_Gua_MeTrfase_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23245:SF43">
        <property type="entry name" value="TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23245">
        <property type="entry name" value="TRNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02475">
        <property type="entry name" value="TRM5-TYW2_MTfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25133">
        <property type="entry name" value="TYW2_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51684">
        <property type="entry name" value="SAM_MT_TRM5_TYW2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7 10" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="SAM-dependent methyltransferase TRM5/TYW2-type" evidence="12">
        <location>
            <begin position="331"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="65"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="421"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="459"/>
            <end position="460"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="487"/>
            <end position="488"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="510"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW21646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="604" mass="68454" checksum="4F2F864D171072C0" modified="2014-02-19" version="1">MVSRSMSNVFLKPYLIPLPSKFLFPNTLKPSLALTLKTTFFIPHFSTTPLSYGPSLRKGTIPSHSQSQSSQNQNDAVLREEAFTRVFLLAALRVPSAECSALEGRLRGHLLNWPRVRNIARVPGDDLDPSLAPLLPQPINGDGEFENEEERTLVSVQRRIHGKADGDGEVLSPVLYRDKLARTFNSRGFVKFRNLAKISRPNRNKKRKKMKEAMEVEEGRRVGQNGFAVVEVVEEEEEDSVGMRRLLGEEFASSKWRGSTRLLLLDERYAGRSVEELPEAIKAVLKEYAEKSTMLTLELVRCKLTLFYDYWQMTEVLETLLPAGMIIPSAFETVGHIAHLNLRDEHLPYKRLIAKVVLDKNRPKIGTVVNKIDSIQNEYRTMQLEVLAGNHSLVTTVVENGIRFQVDLATVYWSSRLGTERQRLLSGFTRTDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAVEYLERNSVLNKLEKKIKVFNMDGRRFIKSLYASDISQSITQVVMNLPSEAAEFLDAFRGIYKNRPKDGEYTFPMIHVYGFSKARDPEFDFHERIRIALVEVAVKVDVRRVRLVAPGKWMLCASFILPKSVAFANSTVDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ08</accession>
    <name>V7BZ08_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_005G145200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the GRAS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ08"/>
    <dbReference type="SMR" id="V7BZ08"/>
    <dbReference type="STRING" id="3885.V7BZ08"/>
    <dbReference type="Gramene" id="ESW22333">
        <property type="protein sequence ID" value="ESW22333"/>
        <property type="gene ID" value="PHAVU_005G145200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUZA">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CERFNVL"/>
    <dbReference type="OrthoDB" id="47276at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005202">
        <property type="entry name" value="TF_GRAS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31636">
        <property type="entry name" value="OSJNBA0084A10.13 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03514">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50985">
        <property type="entry name" value="GRAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="178"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="236"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="VHIID" evidence="5">
        <location>
            <begin position="348"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Leucine repeat II (LRII)" evidence="5">
        <location>
            <begin position="429"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="region of interest" description="SAW" evidence="5">
        <location>
            <begin position="567"/>
            <end position="642"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="VHIID" evidence="5">
        <location>
            <begin position="379"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="33"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW22333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="644" mass="71808" checksum="B325672C61C26344" modified="2014-02-19" version="1">MLSTNSLLQNFGGSISVFSDQNQVAEGIEFDDSSSPSSGTSSSGESTKYSNNILRYISDILMDEEDDLESKPCMLEECLRLQAAEKSFLDVLVHRSSSFSGEIVDPDENFGRTASFESNGSCTTENSCDSDLVNGVGEFDSSFLLQQTHLVYSPDVVDAFRARDGTWNLVQSHTKPVMVEEGCSGSASREKRSHQNDDGFHEQEGRRGSKVSAVFSDELEPPEILDELLLCQIGRSGSGSEPSQGVDLRGSNGKATRTRPKKGSTKAGTAAVDLWTLLTQCAQAVASFDQRNANELLSQIRQHSSPYGDGLQRLAHYFANGLQIRLAAGTPSYVPLEVATAADMLKAYKLFVTSSPLQRMSNYLATKTIISLVKNESSVHIIDFGICYGFQWPCLLKRLSERQGGPPRLRITGIDLPRPGFRPAERVEETGRRLENYCKKFNVPFEYNCLAQKWETIKLADLKLDANEVTVVSCFNRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEVNVPREDSQRVMFEKGLLGRDAMNVIACEGAERVERPETYKQWQVRNLRAGFKQVPLDPELVNYAKQMVKNEYHKDFVVAEDGKWILQGWKGRILNAISAWAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZC2</accession>
    <name>V7BZC2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Reticulon-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G029300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Endoplasmic reticulum membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZC2"/>
    <dbReference type="Gramene" id="ESW23229">
        <property type="protein sequence ID" value="ESW23229"/>
        <property type="gene ID" value="PHAVU_004G029300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1792">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="567788at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009617">
        <property type="term" value="P:response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003388">
        <property type="entry name" value="Reticulon"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045064">
        <property type="entry name" value="Reticulon-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10994">
        <property type="entry name" value="RETICULON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10994:SF67">
        <property type="entry name" value="RETICULON-LIKE PROTEIN B16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02453">
        <property type="entry name" value="Reticulon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50845">
        <property type="entry name" value="RETICULON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="143"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Reticulon" evidence="7">
        <location>
            <begin position="41"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW23229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="218" mass="24970" checksum="A3C2FE85E2D43ECA" modified="2014-02-19" version="1">MGWCFDMMFQGSKFYMKKAALMWIINYFPAYVLLSGLGTHVADVLMWKKWQVSLGVIVVATVAWIVFEWTNLPFLTISSDVLLFLIILLFLRANYAVLRNKQPPTLPELVVSEEMVNNAAASFRVKINNALLIANDITIGKDFIIFFKVVICLWLLSVIGSVFSFFTLAYIGTLLMITIPVLYRKYGGYVDKCCGVINRKLPRRYRIVDRNTPQEKDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C0V7</accession>
    <name>V7C0V7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G160700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C0V7"/>
    <dbReference type="SMR" id="V7C0V7"/>
    <dbReference type="Gramene" id="ESW22531">
        <property type="protein sequence ID" value="ESW22531"/>
        <property type="gene ID" value="PHAVU_005G160700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMFSATE"/>
    <dbReference type="OrthoDB" id="1857192at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00293">
        <property type="entry name" value="USP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000298">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000211">
        <property type="entry name" value="Dual-specific kinase DSK1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF14">
        <property type="entry name" value="INACTIVE PROTEIN KINASE SELMODRAFT_444075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="5">
        <location>
            <begin position="404"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="200"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="200"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="220"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="258"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="271"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW22531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="697" mass="77349" checksum="16E4BCE0D21209A5" modified="2014-02-19" version="1">MSREQQKRGKQEICSDDAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFSGDCASGHKKSSSGSSSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGKKKKDLEELCSLPSEQDQLLGKQTKNKNDSLNSLKGPVVTPSSSPELGTPFTATEAGTSSVSSSDQGTSPFFISEINSESKKEETIKENPELDDSISDTDSENLSTSSASLRFQPWITDLLLHQRSSQPKEERTERCHNRTQLSTTRALLEKFSRLDREAEIEISTYKTDLDFSGSVREAISLSRNNPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELIDPRLGSHYSEHEVYCMLHAASLCIRKDPYSRPRMSQVLRILDGDTVMDPNYVSTPSYDVGNRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2P7</accession>
    <name>V7C2P7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G129700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2P7"/>
    <dbReference type="SMR" id="V7C2P7"/>
    <dbReference type="MEROPS" id="I03.030"/>
    <dbReference type="Gramene" id="ESW24424">
        <property type="protein sequence ID" value="ESW24424"/>
        <property type="gene ID" value="PHAVU_004G129700g"/>
    </dbReference>
    <dbReference type="OMA" id="MHERSRD"/>
    <dbReference type="OrthoDB" id="1872570at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004867">
        <property type="term" value="F:serine-type endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.80.10.50">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011065">
        <property type="entry name" value="Kunitz_inhibitor_STI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002160">
        <property type="entry name" value="Prot_inh_Kunz-lg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107:SF21">
        <property type="entry name" value="KUNITZ FAMILY TRYPSIN AND PROTEASE INHIBITOR PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33107">
        <property type="entry name" value="KUNITZ TRYPSIN INHIBITOR 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00197">
        <property type="entry name" value="Kunitz_legume"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00291">
        <property type="entry name" value="KUNITZINHBTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00452">
        <property type="entry name" value="STI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50386">
        <property type="entry name" value="STI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00283">
        <property type="entry name" value="SOYBEAN_KUNITZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="1" id="KW-0646">Protease inhibitor</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0722">Serine protease inhibitor</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755186" evidence="4">
        <location>
            <begin position="28"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW24424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="17878" checksum="9F38A84D3C121006" modified="2014-02-19" version="1">MKPTAVLALFFLLLLLAFLTNLPLAFSNVQPIVDTNGNPIFRGFTYYIFPAIFGPSGGGLKLAQTGNSKCALTVLQDYSNLFRGIHHTWNPISTRFHIENYHFGYKLVFCITGSPTCLDIGRFDAENGEDGRRLNLTEHEAFDLVFVKVFEADKVIKSVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2R8</accession>
    <name>V7C2R8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 18">Peroxidase</fullName>
            <ecNumber evidence="4 18">1.11.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_004G132000g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:56136"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:139520"/>
            <dbReference type="ChEBI" id="CHEBI:139521"/>
            <dbReference type="EC" id="1.11.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <text evidence="15 18">Binds 2 calcium ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 18">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 18">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="18">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxidase family. Ascorbate peroxidase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.7" evidence="4 18"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2R8"/>
    <dbReference type="STRING" id="3885.V7C2R8"/>
    <dbReference type="Gramene" id="ESW24449">
        <property type="protein sequence ID" value="ESW24449"/>
        <property type="gene ID" value="PHAVU_004G132000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSBQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VNSYAMN"/>
    <dbReference type="OrthoDB" id="2113341at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140825">
        <property type="term" value="F:lactoperoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00693">
        <property type="entry name" value="secretory_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.420.10:FF:000006">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.520.10:FF:000001">
        <property type="entry name" value="Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.420.10">
        <property type="entry name" value="Peroxidase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000823">
        <property type="entry name" value="Peroxidase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019793">
        <property type="entry name" value="Peroxidases_heam-ligand_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033905">
        <property type="entry name" value="Secretory_peroxidase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31517:SF84">
        <property type="entry name" value="PEROXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00461">
        <property type="entry name" value="PLPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="Heme-dependent peroxidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00435">
        <property type="entry name" value="PEROXIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 15 18" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 17" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 18" id="KW-0349">Heme</keyword>
    <keyword evidence="18" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 15 18" id="KW-0408">Iron</keyword>
    <keyword evidence="19" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 15 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 18" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="18" id="KW-0964">Secreted</keyword>
    <keyword evidence="19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="Plant heme peroxidase family profile" evidence="20">
        <location>
            <begin position="85"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
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    <feature type="binding site" evidence="15">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="148"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="295"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
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    <feature type="binding site" evidence="15">
        <location>
            <position position="302"/>
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        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
            <label>2</label>
        </ligand>
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    <feature type="site" description="Transition state stabilizer" evidence="16">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="95"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="128"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="180"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="17">
        <location>
            <begin position="258"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR600823-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW24449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="41199" checksum="5147A4886569D577" modified="2014-02-19" version="1">MKGWCQLFPTIQSFIFFFSPCWSTLQLSSILSPSIVCVYIPCCFIKILNKPLLNSLKTVIMANFLTLLFAVEMIVVSGFSLGASGLNMNYYLFSCPLAELIVKSTLNRALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTFNLPAPIFNASQLIKMFGQRGFSAKDMVALSGAHTLGVARCSSFKQRLTPLDPSLDSQFAKTLSKTCSGGDTAEQPFDSTRNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNLVNSYAMNQALFFLDFLQAMVKMSTLDVKEGSRGEVRRNCHKIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3G3</accession>
    <name>V7C3G3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G079300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3G3"/>
    <dbReference type="STRING" id="3885.V7C3G3"/>
    <dbReference type="Gramene" id="ESW23830">
        <property type="protein sequence ID" value="ESW23830"/>
        <property type="gene ID" value="PHAVU_004G079300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0311">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TLMECFH"/>
    <dbReference type="OrthoDB" id="337575at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044592">
        <property type="entry name" value="RING1A/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017907">
        <property type="entry name" value="Znf_RING_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46537:SF3">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE RING1A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46537">
        <property type="entry name" value="OS11G0578200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13923">
        <property type="entry name" value="zf-C3HC4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00518">
        <property type="entry name" value="ZF_RING_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="6">
        <location>
            <begin position="43"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW23830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="30272" checksum="372D2423EA00FBD6" modified="2014-02-19" version="1">MSAQNPPHEQPQEDEVESDQNHSLSNLDKDEKHRVIGLSGLQCAVCRGIIQNTRTLMECFHKFCKECIEKSIRLGVNECPVCHVHVSQLSLKEDPQYDAIVSAIVPQIVKYKTQEEVDLLLLGKTNDKETMTNVRDNRARNSRLSKFIDLLRNSDVKIDQLEIHLELVSLDEQRAPSLQEPYVVCRPSCTVKTVCKYIERNAKMLRNQVELFLIEESEANAVSGKITVDADKDKLRVLRDEETLAELYTPNVTHSARLLLGYKMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3M8</accession>
    <name>V7C3M8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G085400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan biosynthesis; sucrose metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3M8"/>
    <dbReference type="SMR" id="V7C3M8"/>
    <dbReference type="Gramene" id="ESW23895">
        <property type="protein sequence ID" value="ESW23895"/>
        <property type="gene ID" value="PHAVU_004G085400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0637">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DIWIASH"/>
    <dbReference type="OrthoDB" id="28755at2759"/>
    <dbReference type="PhylomeDB" id="V7C3M8"/>
    <dbReference type="UniPathway" id="UPA00238"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008506">
        <property type="term" value="F:sucrose:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005985">
        <property type="term" value="P:sucrose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd17313">
        <property type="entry name" value="MFS_SLC45_SUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000174">
        <property type="entry name" value="Sucrose transport protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005989">
        <property type="entry name" value="Suc_symporter_pln"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01301">
        <property type="entry name" value="GPH_sucrose"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19432:SF89">
        <property type="entry name" value="SUCROSE_H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19432">
        <property type="entry name" value="SUGAR TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="161"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="209"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="268"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="310"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="343"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="386"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="422"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="455"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW23895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="52837" checksum="4515AF010D6B0AED" modified="2014-02-19" version="1">MEEQPKPESSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSAFGRRRPFILAGALAVAIAIILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFFSFFMAVGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLALCIIVLTCVNDPQYIPSNPEKEAEEEGKTQVSCFLGECCVAFKGLQRPMWMLMLVTAINWIAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVHAGSLGLMLNSVVLAVMSLAVEPLGRLVGGVKWLWAIVNVILAACMALTVLITKVAEQQRALNPALIGNPSMEVKGGAMAFFSVLGIPLAITYSVPFALASIYSSTSGAGQGLSLGLLNVAIVIPQMIVSAISGPWDDWFGGGNLPAFVLGAGAAAISAILAVILLPSPKKEDEAKISSLSMGSFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3P7</accession>
    <name>V7C3P7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_004G055200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Potential calcium sensor that binds calcium in vitro.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3P7"/>
    <dbReference type="SMR" id="V7C3P7"/>
    <dbReference type="STRING" id="3885.V7C3P7"/>
    <dbReference type="Gramene" id="ESW23531">
        <property type="protein sequence ID" value="ESW23531"/>
        <property type="gene ID" value="PHAVU_004G055200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ECRIMIS"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="PhylomeDB" id="V7C3P7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000237">
        <property type="entry name" value="Calcium-binding protein CML38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000341">
        <property type="entry name" value="Putative calcium-binding protein CML19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="3"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="39"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="75"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="5">
        <location>
            <begin position="111"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00057710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW23531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="141" mass="15983" checksum="63C98DD42EFADE72" modified="2014-02-19" version="1">MMDKVSQYVCVFNHFDENGDGKISASELRQCVEAIGGKLSWKEAESLVEVLDSDKDGLVGLDDFVRFVEEVEEEEKVEDLREAFKMYEMEGCGCITPKSLKRMLGRLGECKSIDECQGMIARFDLNGDGVLTFDEFRVMML</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3V0</accession>
    <name>V7C3V0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mitochondrial inner membrane protease ATP23</fullName>
            <ecNumber evidence="6">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G059400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M76 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="6"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3V0"/>
    <dbReference type="STRING" id="3885.V7C3V0"/>
    <dbReference type="Gramene" id="ESW23581">
        <property type="protein sequence ID" value="ESW23581"/>
        <property type="gene ID" value="PHAVU_004G059400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3314">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EAHQNCV"/>
    <dbReference type="OrthoDB" id="1334004at2759"/>
    <dbReference type="PhylomeDB" id="V7C3V0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034982">
        <property type="term" value="P:mitochondrial protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033615">
        <property type="term" value="P:mitochondrial proton-transporting ATP synthase complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019165">
        <property type="entry name" value="Peptidase_M76_ATP23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21711:SF0">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEASE ATP23 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09768">
        <property type="entry name" value="Peptidase_M76"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2 6" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW23581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="179" mass="20451" checksum="AAD11362BED15799" modified="2014-02-19" version="1">MEKKSMSEEECQIMIQKSFRTPMVKFLRERLEKAGCAVGDNFFKAITCNQKVAGYYVRGEGVKVCSNNLKIQDSVNQVVIRELIHAFDDCRGANLDWTDCAHHACTEIRTNHLSGDCHYKRELLRGFIKLRGHEQECVRRRVLESLSANPNCSGFAAKDSLEAVWDVCYNDTQPFDRAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C535</accession>
    <name>V7C535_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">DNA gyrase subunit A, chloroplastic/mitochondrial</fullName>
            <ecNumber evidence="5">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G022300g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the type II topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C535"/>
    <dbReference type="SMR" id="V7C535"/>
    <dbReference type="STRING" id="3885.V7C535"/>
    <dbReference type="Gramene" id="ESW25277">
        <property type="protein sequence ID" value="ESW25277"/>
        <property type="gene ID" value="PHAVU_003G022300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0355">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THHWLLF"/>
    <dbReference type="OrthoDB" id="276498at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009330">
        <property type="term" value="C:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.268.10:FF:000001">
        <property type="entry name" value="DNA gyrase subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.120.10.90:FF:000007">
        <property type="entry name" value="DNA gyrase subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1360.40:FF:000002">
        <property type="entry name" value="DNA gyrase subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.199.10:FF:000001">
        <property type="entry name" value="DNA gyrase subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="entry name" value="DNA gyrase/topoisomerase IV, subunit A, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="entry name" value="Topoisomerase II, domain 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="entry name" value="Topoisomerase, domain 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01897">
        <property type="entry name" value="GyrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005743">
        <property type="entry name" value="GyrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050220">
        <property type="entry name" value="Type_II_DNA_Topoisomerases"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01063">
        <property type="entry name" value="gyrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004043">
        <property type="entry name" value="PRK05560.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004044">
        <property type="entry name" value="PRK05561.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43493:SF5">
        <property type="entry name" value="DNA GYRASE SUBUNIT A, CHLOROPLASTIC_MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43493">
        <property type="entry name" value="DNA GYRASE/TOPOISOMERASE SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="GyrA/ParC C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="Type II DNA topoisomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS52040">
        <property type="entry name" value="TOPO_IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 12" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Topo IIA-type catalytic" evidence="14">
        <location>
            <begin position="124"/>
            <end position="592"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="73"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="81"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-tyrosine intermediate" evidence="12">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00074255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS52040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="942" mass="103768" checksum="4C8659C1EBFC70D3" modified="2014-02-19" version="1">MKPSPLHFQNPNLLCTNPSPSMAFSSALRVLRLSPFLQPSRLRLSPSHPRLLSPFQPRLISARASRRPAAAVKAVRRSDENGSVTATADSGNGSEGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLADLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILDAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTNKASLVEKIAEVVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSQARGRKHIVEGILIGFDNLDEVIRIIREASSNSAAAVGLRNAFSLSEKQAEALLDMSLRRLTLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKNKFANPRRSMLEDTDNGQLEDIDVIPNEDMLLAVSEKGYLKRMKPSTFNLQNRGTIGKSVGKLRVNDSMSDFLVCRAHDHVLYFSDKGTVYSARAYKVPECSRTAAGTPLVHILSLSDGERITSIIPVSEFVEDQFLLMLTMQGYIKRVSLNLFSSIRSTGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLCQCSKIRTLSRNTRGSLAMRLKNGDSMASVDIIPAAMWNNLETLSKYPDNSGKGQKGPWLLFVSENGHGKRVPLSSFRVSSLNRVGLVGYKFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQTGTVNRIKVRDISIQSRFARGVILMRLDYAGKIQSASLISATDCEPEEVLAAAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6N7</accession>
    <name>V7C6N7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NB-ARC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G0023000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6N7"/>
    <dbReference type="Gramene" id="ESW25033">
        <property type="protein sequence ID" value="ESW25033"/>
        <property type="gene ID" value="PHAVU_003G0023000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAHISED"/>
    <dbReference type="OrthoDB" id="1435486at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001091">
        <property type="entry name" value="Probable disease resistance protein At1g61300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF105">
        <property type="entry name" value="AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0611">Plant defense</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="NB-ARC" evidence="7">
        <location>
            <begin position="244"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="756"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="756" mass="85856" checksum="A4AEF8EB4D7885D8" modified="2014-02-19" version="1" fragment="single">PWIPFISVKADSTCARTDLARSGSESTRLPGLGQLGSTWTRANYTRPEPELTRLDIGSTWAQVDLERHGHGSFRLDTSPCPLDSTWVQTDSARHGDLVCGALNQLRYPCCFNNFIKKLEQEEGDLIVTRDSVQTFVAHAERQTRKTSEVVDKWLQDAIINVDNVSQLLKEAKTKKICCFGHCPNWIWRHRVGKKLANKTVDLEKFIVEGRKYVPFDRIATLPSGTLNILSEKCMNFESRQFAYEKLLEAVKNNDVAMIGLYGMGGCGKTTLAMEVRKLVEAEHLFDKVLFVPISSTVEVRRIQEKIASSLQYIFPETEEMERAQRLCLRLTQEKNILMILDDVWEKLDFGGIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFQNKALIFEDTPDTLKNLARLISNECKGLPVAIAAVASSLKGKVETIWSVALNKLRSSKPINIERGLTDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDFEIPIELLIRCAIGLGVVGEAHSYEVARSEVIAAKIKLVSSCLLLDEEDECVKMHDIVRDVAHLIAKNENKIIKCEEEKDVTIEQNFVKYLWCVKFPNDLDCSNLEFLFLKTKLLEFDGIFKRMGMLKVLILVNDEDGKTPLSKVSFQALQNLRYLLIYGYELSNFTFVGDMKKLQSLSLHGCLLPSFPELQTDVVISQVTSLKLLELNKCDIKGKKFEVIKRTPLLEELYIVNIEGEWDANSEDNIEFFNTFSVPQTLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7B1</accession>
    <name>V7C7B1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Fe-S cluster assembly factor HCF101, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_004G160900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Plastid</location>
            <location evidence="2">Chloroplast stroma</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7B1"/>
    <dbReference type="SMR" id="V7C7B1"/>
    <dbReference type="STRING" id="3885.V7C7B1"/>
    <dbReference type="Gramene" id="ESW24796">
        <property type="protein sequence ID" value="ESW24796"/>
        <property type="gene ID" value="PHAVU_004G160900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3022">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1741334at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009570">
        <property type="term" value="C:chloroplast stroma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140663">
        <property type="term" value="F:ATP-dependent FeS chaperone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02037">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.2020.30:FF:000001">
        <property type="entry name" value="fe-S cluster assembly factor HCF101, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.130:FF:000008">
        <property type="entry name" value="Fe-S cluster assembly factor HCF101, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000704">
        <property type="entry name" value="fe-S cluster assembly factor HCF101, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2020.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="entry name" value="Fe-S cluster assembly (FSCA)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02040">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010376">
        <property type="entry name" value="GBBH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038492">
        <property type="entry name" value="GBBH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019591">
        <property type="entry name" value="Mrp/NBP35_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="IRON-SULFUR PROTEIN NUBPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961:SF2">
        <property type="entry name" value="IRON-SULFUR PROTEIN NUBPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06155">
        <property type="entry name" value="GBBH-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="Fe-S cluster assembly (FSCA) domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="MIP18 family-like" evidence="13">
        <location>
            <begin position="84"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="Gamma-butyrobetaine hydroxylase-like N-terminal" evidence="14">
        <location>
            <begin position="440"/>
            <end position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00071960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF06155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW24796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="534" mass="58177" checksum="83213D8938D515CB" modified="2014-02-19" version="1">MQLLHAPSSPHLSIQTSKPQHLTWGFLPSVTVNSSPFSTLHFSLHSQKDQRLLWTPHKRVTSRAASVEDAVGDSSVSTGTAEGDVLKALSQIIDPDFGTDIVTCGFVKDLQIDKALGEVSFRLELTTPACPVKDMFEQQANEVVAMLPWVKNVKVTMSAQPARPIYAEQLPAGLQTISNIVAVSSCKGGVGKSTVAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRVLLMDPVKKTIIPTEYSGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLIIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPNLSASGDSGMPEVVADPQGEVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKTIKAIKVKVPDSKEEFFLHPATVRRNDRSAQSVDEWTGDQKLQYNDVPEDIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTMERLVDDVLEPSVQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7Q0</accession>
    <name>V7C7Q0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G094200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7Q0"/>
    <dbReference type="Gramene" id="ESW26139">
        <property type="protein sequence ID" value="ESW26139"/>
        <property type="gene ID" value="PHAVU_003G094200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZ5W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MICTEAL"/>
    <dbReference type="OrthoDB" id="1106808at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36757">
        <property type="entry name" value="BNAANNG22500D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36757:SF4">
        <property type="entry name" value="DUF4005 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755057" evidence="2">
        <location>
            <begin position="17"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="258" mass="28522" checksum="FBD5863CCA8EA972" modified="2014-02-19" version="1">MLFCLHLFVCVGGICCVVMCSETSPPRLSFSHDLSELQVSPMKQDISCRDTLLHDSNSDFEFSTSTTSLNFESSSADELFSNGVILPIQMQDKTTARKLTHHVEHPHTKLPPRPCVDKVKKETIRELIDVAPDHEKKPLSKSFWGFNRSKSLNRDTKKNMVCSIPLLSRSNSTGSVPNPKKVSSNKHKSSSSSYSYSALNMYPMQKSASGKGYGGYYPNGLRINPVLNVPTPCVSKGSANLFSLGSFLRVGKVKKSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C813</accession>
    <name>V7C813_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">protein-serine/threonine phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G108200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="4"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C813"/>
    <dbReference type="SMR" id="V7C813"/>
    <dbReference type="Gramene" id="ESW26307">
        <property type="protein sequence ID" value="ESW26307"/>
        <property type="gene ID" value="PHAVU_003G108200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SMMKNSK"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="PhylomeDB" id="V7C813"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045926">
        <property type="term" value="P:negative regulation of growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009414">
        <property type="term" value="P:response to water deprivation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000038">
        <property type="entry name" value="Probable protein phosphatase 2C 34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="12">
        <location>
            <begin position="60"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW26307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="41070" checksum="24E0C61C97D031DD" modified="2014-02-19" version="1">MVLFPSFVNGLAKTVSIKKEKNCKGEDGRKAAEELAKEARKNELLLSSSGVVKSTKADNLVSMFTNRGRKGVNQDRLLVWEEFGCQQDITFCGVFDGHGPWGHFVAKRVKKLVPAILLCNWQENLAATSLDLDFKMEADKHIRGLDMWKHSYIKTYAAVDQDLKQQTEFDSFLSGSTALTIIKQGEYLITANIGDSRAVLATTSEDGILTPYQLTTDFKPNLPEEAERITQCRGQVFSLEDEPEVYRVWKPNGKTPGLAISRAFGDHCMKDFGLISVPDVTHTKITNRDHFVILATDGVWDVISNQEAVNIVSATPHKEKAAQSLVKCAMREWKRKRSSIAMDDMSAICLFFHSFPSHQLPPIKTVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8W8</accession>
    <name>V7C8W8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phospholipase A1</fullName>
            <ecNumber evidence="5">3.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G058000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the AB hydrolase superfamily. Lipase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8W8"/>
    <dbReference type="SMR" id="V7C8W8"/>
    <dbReference type="Gramene" id="ESW25700">
        <property type="protein sequence ID" value="ESW25700"/>
        <property type="gene ID" value="PHAVU_003G058000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4569">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IQAAEWV"/>
    <dbReference type="OrthoDB" id="438440at2759"/>
    <dbReference type="PhylomeDB" id="V7C8W8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008970">
        <property type="term" value="F:phospholipase A1 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000065">
        <property type="entry name" value="Phospholipase A1-II 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033556">
        <property type="entry name" value="PLA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31828:SF15">
        <property type="entry name" value="PHOSPHOLIPASE A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31828">
        <property type="entry name" value="PHOSPHOLIPASE A1-IIGAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="4 5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fungal lipase-type" evidence="6">
        <location>
            <begin position="134"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU367093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="399" mass="44354" checksum="73884E1F22252E4D" modified="2014-02-19" version="1">MGSIARKWRELSGRSNWKGLLDPLDIDLRRYIIHYGQLAQATYDGFNSEKASNLAGNSRYSKREFFGKVGLENGNPFKYLVTKFLYATSKASDSEKFLLRSFSKDAWSLQSNWIGYVAVATDEGKEALGRRDIVVAWRGTIQAAEWVKDFHFHLDPAPEIFGDAASAELHHGFYSLYTSKNPGSKFTNTSARNQVLEEVGRLVEEYKNEEISISVTGHSLGAALATLNAVDIAAQGLNKPKGQPQKACPVTAFAYASPRVGDSSFEDAFNGYKDLRALRIRNETDIVPVSLLLGFSDVGEELLIDTRKSKFLKEGVSAHNLEAYLHGVAGTQGKKGGFNLEVNRDIALLNKGMDALKDEYLVPVEWRVQENKGMVQQLDGTWKLIEKNEDGFQSIHSSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C931</accession>
    <name>V7C931_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Large ribosomal subunit protein mL54</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G138900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the mitochondrion-specific ribosomal protein mL54 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C931"/>
    <dbReference type="SMR" id="V7C931"/>
    <dbReference type="STRING" id="3885.V7C931"/>
    <dbReference type="Gramene" id="ESW26676">
        <property type="protein sequence ID" value="ESW26676"/>
        <property type="gene ID" value="PHAVU_003G138900g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW26677">
        <property type="protein sequence ID" value="ESW26677"/>
        <property type="gene ID" value="PHAVU_003G138900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3435">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLWHLLD"/>
    <dbReference type="OrthoDB" id="10252718at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005762">
        <property type="term" value="C:mitochondrial large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013870">
        <property type="entry name" value="Ribosomal_mL54"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28595">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28595:SF1">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN ML54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08561">
        <property type="entry name" value="Ribosomal_L37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0809">Transit peptide</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="29"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00035179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="131" mass="14564" checksum="EC116B4517B087A7" modified="2014-02-19" version="1">MAMNYARSIRYILTTKEAVRVACQRTFATGKAKKGSKGGGAADAPKASTLSKEVKSSTVVGANILKEGTDPKILLDSDYPDRLWHLLDKRPALSELRRNNIETLAYDNLKRFVKLDNRARIKENNSVKAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C974</accession>
    <name>V7C974_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Mitotic spindle checkpoint protein MAD1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G076200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MAD1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C974"/>
    <dbReference type="SMR" id="V7C974"/>
    <dbReference type="STRING" id="3885.V7C974"/>
    <dbReference type="Gramene" id="ESW25913">
        <property type="protein sequence ID" value="ESW25913"/>
        <property type="gene ID" value="PHAVU_003G076200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4593">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKLDFMP"/>
    <dbReference type="OrthoDB" id="331602at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000776">
        <property type="term" value="C:kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0072686">
        <property type="term" value="C:mitotic spindle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005635">
        <property type="term" value="C:nuclear envelope"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051315">
        <property type="term" value="P:attachment of mitotic spindle microtubules to kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007094">
        <property type="term" value="P:mitotic spindle assembly checkpoint signaling"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.457.60:FF:000004">
        <property type="entry name" value="Mitotic spindle checkpoint protein MAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.457.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008672">
        <property type="entry name" value="Mad1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23168:SF0">
        <property type="entry name" value="MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23168">
        <property type="entry name" value="MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05557">
        <property type="entry name" value="MAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75704">
        <property type="entry name" value="Mitotic arrest deficient-like 1, Mad1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57997">
        <property type="entry name" value="Tropomyosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0498">Mitosis</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="153"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="55"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="375"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="472"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="33"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW25913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="699" mass="80562" checksum="DDDEC304E32BA4DB" modified="2014-02-19" version="1">MIVRTPPPPKRPREGDVDGDGNGQLVIYEDPPESSQEPSASEHMLCTYQCRQMVKSDFIEALSKAENQARDYQSKFETLEDNFQKVESEKRKFLDQFLYAEQELAAAKGREQALQEQLLKEVTESQERLRKQIQLNSELQVKLKNETNICKKAESHASSAEEKVTSLEGKLGHLSESIEREKKRLHDEHSQLKSDSKLSISRISANLEQMECRANNAEREAELLKEQLKDLKDQHDECLHQKIELEKKVSTLMFQEVVSTDSNALVKHLQEELQNYESEVREARKLRSSHENIDLLKEKLLEEKSHREWAESELSKLQDIQLNMKKLEDQISSWRMMITDIPGVTCFEDMPVKFAALQKEIIYSTQKEGEITARLKQMEVALEAAEMGKQNAEAEAALAKEKSEALISEIKRIELVLAVVSEERNKLRSGENLDGSKNEPESFLMKKDDCIKELESTLHDQRLINNRQLEEIKLLNERLHSEARRVKSLERESDRLRSEISLLEAKLGHGDFSTANTKVLRMVNTLTVDNEAKQTIEALQTELQKTKEKLKAVEELKSQSGEAGKLVDSYISEKMLKLKEQIATLEKREERYKTVFADRISVFRRACCELFGYKIVMDEHHRPNGIPVTRFTLQSIYAQSDDEKLEFEYESGNTNILANHYTSLPEVSRQVEIFIRKMNSIPAFTANITVESFNKRTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CA35</accession>
    <name>V7CA35_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G093500g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CA35"/>
    <dbReference type="STRING" id="3885.V7CA35"/>
    <dbReference type="Gramene" id="ESW26130">
        <property type="protein sequence ID" value="ESW26130"/>
        <property type="gene ID" value="PHAVU_003G093500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUNQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2442898at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF122">
        <property type="entry name" value="OS09G0499600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="5">
        <location>
            <begin position="4"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW26130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="38925" checksum="836DE9DEFC3F00DC" modified="2014-02-19" version="1">MASGRTNPAWKHCVYVDGKTRNLICKYCEKVLIRGVYKLKHHLAGTSKDVGAYMSVLKEVKKSMLDIVVTLQQNLLRKSMSREEKIALFFYNNVIPFNVANSEEFKRMLELVGRHGPRLKPPSYHELRVKYLKQRNEKTNLIMEEHKLFWKKTGYQGEIQLKKIFKMMDDIVEEVGEENIIQVVIDNAANYRAVGELLIQKRKNFEKKISLHHNTIANCKKITTYIYSRTGLISLLHKYSQGKYLIRPTNTRFATSYLTLGFLNENKLSLIRTFTSSKWQSSQFVKTRDGRLVENLILDKGFSKNILNCLRGVLPLIKVLRMVDSNEKPVMGFIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAA1</accession>
    <name>V7CAA1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Alanyl-transfer RNA synthetases family profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_003G105100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-II aminoacyl-tRNA synthetase family. Alax-L subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAA1"/>
    <dbReference type="SMR" id="V7CAA1"/>
    <dbReference type="STRING" id="3885.V7CAA1"/>
    <dbReference type="Gramene" id="ESW26273">
        <property type="protein sequence ID" value="ESW26273"/>
        <property type="gene ID" value="PHAVU_003G105100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0188">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPVEIDF"/>
    <dbReference type="OrthoDB" id="288942at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.980.10:FF:000008">
        <property type="entry name" value="Similar to alanyl-tRNA synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.130:FF:000013">
        <property type="entry name" value="Threonyl and alanyl tRNA synthetase second additional domain-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.980.10">
        <property type="entry name" value="Threonyl-trna Synthetase, Chain A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018164">
        <property type="entry name" value="Ala-tRNA-synth_IIc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051335">
        <property type="entry name" value="Alanyl-tRNA_Editing_Enzymes"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43462">
        <property type="entry name" value="ALANYL-TRNA EDITING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43462:SF2">
        <property type="entry name" value="THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01411">
        <property type="entry name" value="tRNA-synt_2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="ThrRS/AlaRS common domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alanyl-transfer RNA synthetases family profile" evidence="4">
        <location>
            <begin position="1"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW26273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="276" mass="30639" checksum="EF15DD811BFAD56F" modified="2014-02-19" version="1">MILNKNPNKQIQGSVDAMDLYKNPTKLEYYDDMWSLQCTATLLSYFKADDGRQVLILDRTIFYPQGGGQPADTGFVLIHGSENKFLVSDVRSKDGGIVFHYGFFENEGGEFEPTHEKGNEVSLFVDEHRRKLNSRLHSAGHLLDICLPRIGLGHLEPGKAYHFSDGPWVEYKGTIPQNEMQSKQKDLELEANALISMGGRISVDILPFGDAAEICGGSLPDYISKESTPRIVRIGDNPGCPCGGTHVADISDIVKIKVSQIRSKKGLTKVYYKVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAE2</accession>
    <name>V7CAE2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G101800g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAE2"/>
    <dbReference type="SMR" id="V7CAE2"/>
    <dbReference type="Gramene" id="ESW26230">
        <property type="protein sequence ID" value="ESW26230"/>
        <property type="gene ID" value="PHAVU_003G101800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WSENTTC"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000162">
        <property type="entry name" value="Adenine nucleotide alpha hydrolase-like domain kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000032">
        <property type="entry name" value="Serine/threonine-protein kinase PBS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47985">
        <property type="entry name" value="OS07G0668900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47985:SF4">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE PBL27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="19"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW26230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="38017" checksum="83B7F731827D1193" modified="2014-02-19" version="1" fragment="single">SKSAKVFTFRELASATKDFRSKFLLGRGGFGRVYKGQLRNGQEIAVKLLDRSSEQGDQEFFAEVEMLSLLHHPNLVTLIGCCSERDQRVLVYEYMPLGSLEDHLYDVPLDKEPLDWKTRMKIANGAAKGLEYLHVCADQSVIFREFKASNILLGEGYHAMLSDFGVAKFGPLGDSSHVSTREVGTYGYCAPEYMVTGHLTPKCDVYGFGVVLLELISGRKVFDKTRSPGMRNLVMWAEPIFKDRNQFHRLVDPLLKGYFPMEGLHQAISVAAMCLHEDADRRPVIRDVVSALTYLESQYYDPNESHRGRKGTWLNKLEKKRESWSENTTCRGRKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBK0</accession>
    <name>V7CBK0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G214800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBK0"/>
    <dbReference type="SMR" id="V7CBK0"/>
    <dbReference type="Gramene" id="ESW27582">
        <property type="protein sequence ID" value="ESW27582"/>
        <property type="gene ID" value="PHAVU_003G214800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSN5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KGVHRDG"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000513">
        <property type="entry name" value="Protein NSP-INTERACTING KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000371">
        <property type="entry name" value="Protein NSP-INTERACTING KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000379">
        <property type="entry name" value="Protein NSP-INTERACTING KINASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046959">
        <property type="entry name" value="PRK1-6/SRF4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48007">
        <property type="entry name" value="LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48007:SF65">
        <property type="entry name" value="OS01G0577600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755170" description="Protein kinase domain-containing protein" evidence="8">
        <location>
            <begin position="19"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="304"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="408"/>
            <end position="678"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="681" mass="74621" checksum="C0AB3116A5EA13B8" modified="2014-02-19" version="1">MNFLHLLLLCLLVALSSSHLVRGNAELRALMDLKKSLDPEDTLLGSWTSDGDPCSGSFLGVACNQHNKVANISLPGRGLSGRVSPAVAELRCLSGLYLQFNRLSGDIPREIANLKELLDLYLNVNYLSGTIPPDIGNMTSLQVLQLGYNQLEGKIPKELGSLKQLNAMSLQHNKLTGQIPLTLGSLEKLKMLYLSSNNFNGIIPATLADIANLEVLDIQNNSLSGTVPSALKRLGEGFKGENNPDLCAVGFSTLKACNSDKILGIGQISSPNISLNNNPSVTLTNPANTHSQSNQIHCSKSRGFLHLVIAASVTTTIITFLSSGIFIFVRYRRQRERVRNTSDCSESQLSPYLPKDFYRSSSPLVNLENYYNGMDSPADGQNANGLSLEYLHRFRFNIDEIESATQHLSEANLLGKSKLSAVYKGVHRDGSLVAIRSISVTCCKTEEDEFLKGLILLTTLRHENIVKMKGFCYSRSRGEWYFVYDFATRGNLSQYLDKEDGSDSVLEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNVSVEKVILDNEFNPLIMDAGLPKLLADDVVFSALKASAAMGYLAPEYITTGCFTEKSDIYAFGVIVLQLLSGKALIGGSIRAAVEAFKFEDFVDTNLKGDYSKSEAAILSKLAIGCTHELPEQRPTMVEVIEELTMLFVHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBU3</accession>
    <name>V7CBU3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">WD repeat-containing protein 75 second beta-propeller domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G144100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBU3"/>
    <dbReference type="STRING" id="3885.V7CBU3"/>
    <dbReference type="Gramene" id="ESW26740">
        <property type="protein sequence ID" value="ESW26740"/>
        <property type="gene ID" value="PHAVU_003G144100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1963">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WILNTRI"/>
    <dbReference type="OrthoDB" id="4096at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057644">
        <property type="entry name" value="Beta-prop_WDR75_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45176">
        <property type="entry name" value="TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45176:SF1">
        <property type="entry name" value="TRANSDUCIN FAMILY PROTEIN _ WD-40 REPEAT FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23869">
        <property type="entry name" value="Beta-prop_WDR75_1st"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23769">
        <property type="entry name" value="Beta-prop_WDR75_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82171">
        <property type="entry name" value="DPP6 N-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="274"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="WD repeat-containing protein 75 second beta-propeller" evidence="8">
        <location>
            <begin position="382"/>
            <end position="639"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF23769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="799" mass="87372" checksum="9FAE169D313236B8" modified="2014-02-19" version="1">MISGGLNYVSSAPAFSKDGKRLLVCSGTSVSVFSTTTGSLVSSLQGHTALVTAVVVVPTTASLLCCCWTASVDGTIRQWDYPVPECLRILDLRLPIFSLVVPSVLSTREEKDAKSSPNVIAYVSVESRNTQDNRPKPLFGQIRKCNLTNFHSVSNLILRETEQPESLTISPSGNFLGIKDKRKLHIWKVPKMDSDSAVSKKITLHHTKTFTVIAFHPTERIVAAGDVTGRILIWRGFGAQKFTNSSGLVNRRPADNDDKPGVRENDDAESCCTWHWHSSGVSHLSFSSDGAYFYSGGKEGVLMLWQLDTGNKKSLPRIGSPLLYFVDSPESSLSSLSCADNQIHILKMPSMEIIKSISGIKPPLLSQDICEGLSNRVSFDCSSGSVAVQTENYRIQFYSLFANRGLYEVQVCERNHQPVDEVTLVVSLVELSVDGSLMGTVEVKLPEDGIGGLVCLKFWELDDNQRFSVSTLIYEPHRDANISAVAFHPTRRMAVSSSYGGDFKVWVCKEEIENKGQKLQNSGWMCHAVGSYKNKAMRAAAFSADGSVLAVAADTVITLWDPNNNVLVAVIGETPMPITSLVFAGSSDYLLSVSHGSKPQLSVWSMSKLAASWSYRLHIEAISSAIDLSYFAVLVILPESNDCTFKGDGIILFFNVTDPVPVASWSVTKAKGGALAFLKGEPSEPAITDGIPSQKLLAYINGDREYVILHPYGKEARELSTTQDDLVFEETGQSGYTSIYGKLPRFDLKRNMASSISFAASERPWESIFSGSSHSLPPLTKLCSEFLESLLEKRTTSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBY9</accession>
    <name>V7CBY9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G149100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBY9"/>
    <dbReference type="SMR" id="V7CBY9"/>
    <dbReference type="STRING" id="3885.V7CBY9"/>
    <dbReference type="Gramene" id="ESW26795">
        <property type="protein sequence ID" value="ESW26795"/>
        <property type="gene ID" value="PHAVU_003G149100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EVANYCY"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00293">
        <property type="entry name" value="USP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000412">
        <property type="entry name" value="Probable receptor-like serine/threonine-protein kinase At5g57670"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000325">
        <property type="entry name" value="Putative receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046958">
        <property type="entry name" value="RBK1/2/STUNTED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47987">
        <property type="entry name" value="OS08G0249100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47987:SF3">
        <property type="entry name" value="OS08G0249100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52402">
        <property type="entry name" value="Adenine nucleotide alpha hydrolases-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="7">
        <location>
            <begin position="296"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="606" mass="67917" checksum="2D63E49CF26830CF" modified="2014-02-19" version="1">MVLPSPAKILIGLSLDPDDSKELLSWAIRVLANPNDTIVAVHVLVNADKKKRVSVRKRQSQLRQAKANVISVLGEFAQTCWSKQVNLEARVALNSTVGGGLSEETKSINADFLLIRGSRNQTNKIGTSKGITGYCFEHAHEGCTIVSVGRRRKADQSVKPNSVHFQVDNKQPNSRRFKKEKQCDKGVSPVLEDYITGIKAQNRSPRTVLNSLEGQSNSTEDDTFSTRVSSTTYTPSLDSKIKSRSKIKPQFSFRFIVSFLASPFRRKNFNIYESENRQPLLKCFSYEQIFNATNDFHQDNLVGRGGYSEVYKGDLSDGRTIAVKRLAKDNKDPNKEKEFLMELGVIGHVCHPNTATLVGCCIENGLYLIFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQIADFGLAKWLPNKWTHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNIAELADPRMEGKYDGLQLYRVVLAASYCVRQTATWRPPMSEVLELLTSGEDSEVGKSWRIPKFTSDELDDYSMVFGYDVPSDLSLEDYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCE9</accession>
    <name>V7CCE9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cathepsin propeptide inhibitor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G130500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCE9"/>
    <dbReference type="STRING" id="3885.V7CCE9"/>
    <dbReference type="Gramene" id="ESW26571">
        <property type="protein sequence ID" value="ESW26571"/>
        <property type="gene ID" value="PHAVU_003G130500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRHRFQI"/>
    <dbReference type="OrthoDB" id="10253408at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.2250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013201">
        <property type="entry name" value="Prot_inhib_I29"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08246">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00848">
        <property type="entry name" value="Inhibitor_I29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755518" description="Cathepsin propeptide inhibitor domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Cathepsin propeptide inhibitor" evidence="2">
        <location>
            <begin position="52"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW26571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="148" mass="16671" checksum="C49D4244C8DF63AB" modified="2014-02-19" version="1">MARLLLLVFAFCAVVIAVAGSTFDESNIIRLASDLNSRVLDVIGQSRNALSFARFARRHGKNYHSADEIRHRFQIFSDNIRLIRSTNKRPLTYTLGVNHFADWTWEEFTRHRLGAAQNCSATLKGNHRLTDAAPPEEVVSPTVTVADF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDD9</accession>
    <name>V7CDD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_003G266600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDD9"/>
    <dbReference type="STRING" id="3885.V7CDD9"/>
    <dbReference type="MEROPS" id="A01.A53"/>
    <dbReference type="Gramene" id="ESW28192">
        <property type="protein sequence ID" value="ESW28192"/>
        <property type="gene ID" value="PHAVU_003G266600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QFPVYDP"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000012">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000014">
        <property type="entry name" value="Aspartyl protease family protein 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF232">
        <property type="entry name" value="OS09G0542100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00792">
        <property type="entry name" value="PEPSIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="9 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 13" id="KW-0645">Protease</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 15" id="KW-0732">Signal</keyword>
    <keyword evidence="14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755652" description="Peptidase A1 domain-containing protein" evidence="15">
        <location>
            <begin position="22"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="502"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="16">
        <location>
            <begin position="100"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW28192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="522" mass="57762" checksum="CA00A9679758F840" modified="2014-02-19" version="1">MLAFVFVVVVTFISLWGFCQCHDHVYTFTMHHRHSEPVRKWSHAAAGIPPPPQKGTVEYYAELADRDRFLRGRKLSQIDAGLAFSDGNSTFRISSLGFLHYTTVEIGTPGVKFMVALDTGSDLFWVPCDCTRCAATDSPAFASAFASDFDLQIYNPNGSSTSKKVTCNNSLCMHRNQCPGTFSNCPYMVSYVSAETSTSGILVEDVLHLTKEDDHHDLVEANVIFGCGQIQSGSFLDVAAPNGLFGLGMEKISVPSMLSREGFTADSFSMCFGRDGIGRISFGDKGSFDQDETPFNLNPSHPTYNVTVTQVRVGTTLFDVEFTALFDSGTSFTYLVDPTYTRLTESFHSHVQDRRRPSDSRIPFEYCYDMSPDANTSLIPSVSLTMGGGSHFAVYDPIIIISTQSELVYCLAVVKSSELSIIGQNFMTGYRVVFDREKLVLGWKKFDCYDMEDRNVIPIRPHTHADVPPAVAAGLGHYPSTDSTTKSKYNSQRSTASPSPHYTLTLLPTFLGFLVFCFVYIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFZ6</accession>
    <name>V7CFZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G041300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFZ6"/>
    <dbReference type="SMR" id="V7CFZ6"/>
    <dbReference type="STRING" id="3885.V7CFZ6"/>
    <dbReference type="Gramene" id="ESW29074">
        <property type="protein sequence ID" value="ESW29074"/>
        <property type="gene ID" value="PHAVU_002G041300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29075">
        <property type="protein sequence ID" value="ESW29075"/>
        <property type="gene ID" value="PHAVU_002G041300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PRHIAGY"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="16"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447">
        <property type="entry name" value="OS03G0856100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47447:SF22">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81901">
        <property type="entry name" value="HCP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="16"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="208"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="275"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="310"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="345"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="421"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="456"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="491"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="526"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="561"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="612"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="647"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="682"/>
            <end position="716"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="717"/>
            <end position="751"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="752"/>
            <end position="786"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="787"/>
            <end position="817"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="892"/>
            <end position="926"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="970" mass="109718" checksum="CB41DB2B3B8DB423" modified="2014-02-19" version="1">MIMKKRELNNLFSRSLQFLHPKHHFSNSSHHPLPGLLPSDDDDTSHDSSLLLSHHYAFLRNALINSSTHSDDSSNDAVSMSNAIRTGFGSETRNFLRQFRGKLSESLVVEVMNLVKRPELCVEFFLWASRQIGYTHTPVVYTALIELLCCNEVHHRVSDMFLMQIRDDDRELLRKLLNVLIQKCCRNGMWNVALEELGRLKDFGYKASPATYNALIQVFLRADKLDTAYLVQKEMSNSGFLMDGYTLSCFAYSLCKVGRFGDALSLIEKEGFVPDTVFYNRMVSGLCEASRFEEAMEILDRMRSNSCIPNVFTYRVLVSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSGDYSYAYKLFKKMDKCGCQPSYLLYNIFIGSVCGNEELPGSDVLELAEKAYSEMLDSGLVLNKVNVSNFARCLCGAGKFDEAFKVICEMMSKGFIPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAHKWFDEMLRDGCIPNVVTYTALIHAYLKARKVFDANKLFQMMLIEGCKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDMESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVKEARELLDTMSINGCEPNQIVYDALIDGFCKTGELESAREVFVKMSERGYSPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTEMIDGLCKVGKTDEAYKLMLKMEEVGCYPNVVTYTAMIDGFGKLGNIEQCLELYTGMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMTQTYWPRHLSSYRKIIEGFNREFVISIGLLDELSENESAPVESLYRILVDKFIKAGRLEVALNLLEEISSSPSPAVANKYLYISLIESLSLASKVDKAFELYASMINKNVVPELSTFVYLIKGLTRVGRWQEALQLSDSICQMDICWLHEEVTDAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGR1</accession>
    <name>V7CGR1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G059700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGR1"/>
    <dbReference type="Gramene" id="ESW29309">
        <property type="protein sequence ID" value="ESW29309"/>
        <property type="gene ID" value="PHAVU_002G059700g"/>
    </dbReference>
    <dbReference type="OMA" id="AKQRYEW"/>
    <dbReference type="OrthoDB" id="1921868at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007263">
        <property type="entry name" value="DCC1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052927">
        <property type="entry name" value="DCC_oxidoreductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33639:SF1">
        <property type="entry name" value="T23E23.25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33639">
        <property type="entry name" value="THIOL-DISULFIDE OXIDOREDUCTASE DCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04134">
        <property type="entry name" value="DCC1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="176" mass="20529" checksum="7EAF8DA7E6369D97" modified="2014-02-19" version="1">MNVRMKRELTSLMKAPIERGWCNGLRCFSSVSSRWKGDIPTLLQPRVLLYDALSLFCHQGVKWVIRADKDIQIKFCSCGLDREDVLHRMLFVEGLNEYSQGSTAALRVLSYLPPPYSALSSLWVIPTPLRDIVYDFAAKQRYEWLGRAKGYLVLREKDLLERFIDREELMRRAQDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHJ3</accession>
    <name>V7CHJ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Galectin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_002G084400g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glycosyltransferase 31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHJ3"/>
    <dbReference type="SMR" id="V7CHJ3"/>
    <dbReference type="STRING" id="3885.V7CHJ3"/>
    <dbReference type="Gramene" id="ESW29609">
        <property type="protein sequence ID" value="ESW29609"/>
        <property type="gene ID" value="PHAVU_002G084400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2287">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RQYFPFK"/>
    <dbReference type="OrthoDB" id="2139606at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010488">
        <property type="term" value="F:UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00070">
        <property type="entry name" value="GLECT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.50:FF:000015">
        <property type="entry name" value="Beta-1,3-galactosyltransferase GALT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001079">
        <property type="entry name" value="Galectin_CRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002659">
        <property type="entry name" value="Glyco_trans_31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214:SF129">
        <property type="entry name" value="BETA-1,3-GALACTOSYLTRANSFERASE GALT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11214">
        <property type="entry name" value="BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00337">
        <property type="entry name" value="Gal-bind_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01762">
        <property type="entry name" value="Galactosyl_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00908">
        <property type="entry name" value="Gal-bind_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51304">
        <property type="entry name" value="GALECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="domain" description="Galectin" evidence="15">
        <location>
            <begin position="165"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW29609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="637" mass="71539" checksum="24F8A8BCAA83C149" modified="2014-02-19" version="1">MKKLYGGVLVASLFMLFMLMILRNGIMKTSIGQGYLTIPILVNGTNPLAWINPTLPAAIQNPDDHSQVISSDILVSSLFAGSNFSKDEQQALQTWNQLNHLIDHTQGLPSAAEAIKEAASAWNSLISSIEEQKQGRANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSITVIGIPNGFLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTPKKVEKVDELEQCNKIVGKNISQLHTAGMHSHTSRESLTTEEQSMNRKYFPFKQGYPFVATLRVGSEGIQMTVDGKHVTSFAFRETLEPWLVSEIKISGDIKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNMTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICLFGTQVSAKFVMKTDDDAFVRVDEVLGSLHRINVDHGLLYGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSHDIARTVAKKFRENHLKMFKLEDVAMGIWIADMKKEGVDVRCENEDRVYPEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI24</accession>
    <name>V7CI24_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">sulfiredoxin</fullName>
            <ecNumber evidence="2">1.8.98.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G097300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>S-hydroxy-S-oxy-L-cysteinyl-[peroxiredoxin] + [protein]-dithiol + ATP = S-hydroxy-L-cysteinyl-[peroxiredoxin] + [protein]-disulfide + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17545"/>
            <dbReference type="Rhea" id="RHEA-COMP:10593"/>
            <dbReference type="Rhea" id="RHEA-COMP:10594"/>
            <dbReference type="Rhea" id="RHEA-COMP:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:17976"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:61973"/>
            <dbReference type="ChEBI" id="CHEBI:61974"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.8.98.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfiredoxin family.</text>
    </comment>
    <dbReference type="EC" id="1.8.98.2" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CI24"/>
    <dbReference type="SMR" id="V7CI24"/>
    <dbReference type="STRING" id="3885.V7CI24"/>
    <dbReference type="Gramene" id="ESW29764">
        <property type="protein sequence ID" value="ESW29764"/>
        <property type="gene ID" value="PHAVU_002G097300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3388">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CHRFEAC"/>
    <dbReference type="OrthoDB" id="10023328at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032542">
        <property type="term" value="F:sulfiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034599">
        <property type="term" value="P:cellular response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd16395">
        <property type="entry name" value="Srx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1530.10:FF:000003">
        <property type="entry name" value="Sulfiredoxin chloroplastic/mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1530.10">
        <property type="entry name" value="Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016692">
        <property type="entry name" value="Sulfiredoxin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21348">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21348:SF2">
        <property type="entry name" value="SULFIREDOXIN-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="ParB/Sulfiredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB-like N-terminal" evidence="9">
        <location>
            <begin position="44"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="128" mass="14081" checksum="73BAC844AD239662" modified="2014-02-19" version="1">MANFVLQVPNTLKSFTLFASYNPNGAPPGGSGSSSGGGGGPVILEIPIDKIRRPLMRTRANDPNKVKELMDSIKEIGLQVPIDVLEVDGVFYGFSGCHRYEAHQRLGLPTIRCKIRRGTKETLRHHLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI29</accession>
    <name>V7CI29_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Nucleolar protein 6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G030700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Nucleus</location>
            <location evidence="1 5">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the NRAP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CI29"/>
    <dbReference type="SMR" id="V7CI29"/>
    <dbReference type="STRING" id="3885.V7CI29"/>
    <dbReference type="Gramene" id="ESW28940">
        <property type="protein sequence ID" value="ESW28940"/>
        <property type="gene ID" value="PHAVU_002G030700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2054">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NPHGGKE"/>
    <dbReference type="OrthoDB" id="10251401at2759"/>
    <dbReference type="PhylomeDB" id="V7CI29"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032545">
        <property type="term" value="C:CURI complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032040">
        <property type="term" value="C:small-subunit processome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034456">
        <property type="term" value="C:UTP-C complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006409">
        <property type="term" value="P:tRNA export from nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1410.10:FF:000012">
        <property type="entry name" value="Nucleolar protein 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005554">
        <property type="entry name" value="NOL6/Upt22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035082">
        <property type="entry name" value="Nrap_D1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035367">
        <property type="entry name" value="Nrap_D2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035368">
        <property type="entry name" value="Nrap_D3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035369">
        <property type="entry name" value="Nrap_D4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035370">
        <property type="entry name" value="Nrap_D5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035371">
        <property type="entry name" value="Nrap_D6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17972:SF0">
        <property type="entry name" value="NUCLEOLAR PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17972">
        <property type="entry name" value="NUCLEOLAR RNA-ASSOCIATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03813">
        <property type="entry name" value="Nrap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17403">
        <property type="entry name" value="Nrap_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17404">
        <property type="entry name" value="Nrap_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17405">
        <property type="entry name" value="Nrap_D4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17406">
        <property type="entry name" value="Nrap_D5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17407">
        <property type="entry name" value="Nrap_D6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Nrap protein" evidence="6">
        <location>
            <begin position="100"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="7">
        <location>
            <begin position="237"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="8">
        <location>
            <begin position="383"/>
            <end position="537"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="9">
        <location>
            <begin position="564"/>
            <end position="737"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="10">
        <location>
            <begin position="740"/>
            <end position="892"/>
        </location>
    </feature>
    <feature type="domain" description="Nrap protein" evidence="11">
        <location>
            <begin position="906"/>
            <end position="1044"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006674"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF17403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF17405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF17406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1052" mass="120131" checksum="B11FB1DB12E7A2E4" modified="2014-02-19" version="1">MEAEAIAMESTELKVSELLKEVNLDYTPQFTKLVDNTVSAIKASIDKIPNDFRVTADLASRFVADIGADKVEFKFKKPEFIKTGGSYSIQSIARPEVNADLIIRLPKECFHEKDYLNYRYYAKRCLYLCLIKKYLERSSSIDRVEWSTIQNEARKPLLIVYPAAKLVEVPGFFVRIIPSAKAIFSIAKLNLKRNNIHNLSNGIDLQATPKYNSSILEDMFIEETDFINKYFVGWKELREALILLKVWARQRSSVYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRVTLNFIATSESRSRVFYFPNEGQIHITKEQKIQLKESFPIVICHPSGGFNLAFRMSRNGFTRLQDEAAMTLKCLEKCRDGGFEEVFMTKIDDAVKYDYCMRINLKGKKEVCAMGFCLDDECWRSYEDKIHGILSKGLNDRAKVIQVTWRNTQCQWRVDDGLSVFDKKPLFIGISVSTLEKAYRMVDIGPNAESKEEALEFQKFWGEKAELRRFKDGRIAESTVWESEQWARHLVLKRIAEHVLSRHLSLSKENIVVVVDQLDFSLLHGAGDPISYSGSLLAAFDVLSKRLRLIEDLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIESLRLSKFVPSCVQALEVMIQLEGSGNWPMDEIAIEKTKSSFLFEIGSSLQKTWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEIGDYQAKQVPSVDKKLFIRSQHGNMINGLQSRYPIFGPVVRLAKRWAASHLFSACMVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSHYDWTFSPLVVDINNDLSQSDEKEINDNFFLRRKSQGESGQSVGPAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLTKLTFQEEIGPYRWECLFRTPLNNYDAVIILHKDTLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKLEFSASFKVWHDYLGGDIIGLTWGESYSSKKRKHEEVADEEDNSWKVLKAVGEIGKGFVRSVYFLKPQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIW8</accession>
    <name>V7CIW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G053300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIW8"/>
    <dbReference type="SMR" id="V7CIW8"/>
    <dbReference type="Gramene" id="ESW29220">
        <property type="protein sequence ID" value="ESW29220"/>
        <property type="gene ID" value="PHAVU_002G053300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMEAGIY"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010019">
        <property type="term" value="P:chloroplast-nucleus signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031930">
        <property type="term" value="P:mitochondria-nucleus signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000530">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At1g74850, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="13"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47936:SF1">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN GUN1, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47936">
        <property type="entry name" value="PPR_LONG DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12854">
        <property type="entry name" value="PPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="13"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="9"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="45"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="80"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="115"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="150"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="185"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="220"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="255"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="290"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="395"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="430"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="465"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="500"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="586" mass="66283" checksum="B3E4357129FAD1B8" modified="2014-02-19" version="1">MQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVDSMKSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFEQMKLEGFAPDKVTYNALLDVFGKSRRPKEAMQVLREMEANAFSPTIVTYNSLISACAKGGLLEEALQLKTQMLDKGIQPDVFTYTTLLSGFEKAGKDEFAIQVFEEMRSVGCKPNICTFNALIKMHGNRGKFAEMMKVFDEIRVCNCSPDIVTWNTLLAVFGQNGMHSQVSGIFKEMKRAGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPSEMSYSSLLHAYANGKEIERMNAFAEEIYSGSIETHPVLLKTLVLVNSKSDLLMDTERAFLELRTRGVSVDITTLNAMLSIYGRKQMVAKANEILNFMHDRGFSPSLTTYNSLMYMHSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKDASRIFSEMKDSALLPDVVTFNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLNRRDEANSFIKSLRDLDPHVSKEEESRLLERIVKMWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKN1</accession>
    <name>V7CKN1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G172500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="AlphaFoldDB" id="V7CKN1"/>
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        <property type="protein sequence ID" value="ESW30664"/>
        <property type="gene ID" value="PHAVU_002G172500g"/>
    </dbReference>
    <dbReference type="OMA" id="VFVHTII"/>
    <dbReference type="PhylomeDB" id="V7CKN1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021775">
        <property type="entry name" value="DUF3339"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128">
        <property type="entry name" value="OS05G0103400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128:SF38">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11820">
        <property type="entry name" value="DUF3339"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="70" mass="7400" checksum="5BEAB6EEB4708F5E" modified="2014-02-19" version="1">MAADWGPVVISVVLFVLLSPGLLFQLPAKGKVVAFGSMQTSGLSILLHTIIFFGLITIFLLAIGVHIYSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKR2</accession>
    <name>V7CKR2_PHAVU</name>
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        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G112200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKR2"/>
    <dbReference type="SMR" id="V7CKR2"/>
    <dbReference type="Gramene" id="ESW29948">
        <property type="protein sequence ID" value="ESW29948"/>
        <property type="gene ID" value="PHAVU_002G112200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0014">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1898716at2759"/>
    <dbReference type="PhylomeDB" id="V7CKR2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000977">
        <property type="term" value="F:RNA polymerase II transcription regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045944">
        <property type="term" value="P:positive regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="TF_MADSbox_sf"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SRF-TF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00404">
        <property type="entry name" value="MADSDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00432">
        <property type="entry name" value="MADS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55455">
        <property type="entry name" value="SRF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51297">
        <property type="entry name" value="K_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00350">
        <property type="entry name" value="MADS_BOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MADS_BOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="MADS-box" evidence="7">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="K-box" evidence="8">
        <location>
            <begin position="85"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="215"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="221"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51297"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW29948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="235" mass="27385" checksum="3452D7A51FE99700" modified="2014-02-19" version="1">MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISPGLTTKKIVDQYQKTLGDIDLWRSHYEKMLENLKKLKDINNKLRRQIRHRIGEGLDLDELSFQQLRTLEEDMVASIGKIRERKFHVIKTRTDTCRKKVKSLEQMNGNLLLELKEKCVIHPQFLLHDEGDEESAVALANGASTLYAFCQHHTHLNLPSHQHQHHGEEPFKTDDLRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKW9</accession>
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        <recommendedName>
            <fullName evidence="4">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
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        <name evidence="5" type="ORF">PHAVU_002G180500g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKW9"/>
    <dbReference type="STRING" id="3885.V7CKW9"/>
    <dbReference type="Gramene" id="ESW30764">
        <property type="protein sequence ID" value="ESW30764"/>
        <property type="gene ID" value="PHAVU_002G180500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2190">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HIFGTHE"/>
    <dbReference type="OrthoDB" id="752362at2759"/>
    <dbReference type="PhylomeDB" id="V7CKW9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="KH-I_PEPPER_rpt1_like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd22460">
        <property type="entry name" value="KH-I_PEPPER_rpt2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
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    </dbReference>
    <dbReference type="InterPro" id="IPR004088">
        <property type="entry name" value="KH_dom_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10288">
        <property type="entry name" value="KH DOMAIN CONTAINING RNA BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00013">
        <property type="entry name" value="KH_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="35"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="138"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="305"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="386"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="554"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW30764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="626" mass="67191" checksum="6D1F3AF65342BBF8" modified="2014-02-19" version="1">MGETGKRYYSQRDYDGDRKNQKRRVNDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGAKDRVITIYCYVKEKEEVEINDEFTSKEPLCAAQDALLKVHVAIVNSITALGDPEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDTADPLHSCAMDFDNFLSISGESEAVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSILIPSDVPIYPPGGLYPPSDPIVTPRAVPPIMGATNVQDLHGYADAANTWPLYSSALPVVSGSGASLSEELIVRILCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANYDECLIIISTTESPSDLKSMAVEAVLLMQGKINDEDDTTVSMRLLVPSKVIGCIIGKSGSIINEIRKRTRADVRISKGDKPKCADVNDELVEVGGSVDCVRDALIQIVLRLRDDVLRERDTSHNPSIGMGAESLYSGSTGFSLPSVLPSVPPVAAPLVYDQRAESGAGLGMLSSSSLYGYGSLSMGENGYSSISSYANKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGATVEISDSKYGRGDRIALISGTPEQKRAAENLIQAFIMAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLB2</accession>
    <name>V7CLB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G199600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLB2"/>
    <dbReference type="STRING" id="3885.V7CLB2"/>
    <dbReference type="Gramene" id="ESW30992">
        <property type="protein sequence ID" value="ESW30992"/>
        <property type="gene ID" value="PHAVU_002G199600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWJC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QCFQAIL"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901696">
        <property type="term" value="P:cannabinoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.43.10:FF:000004">
        <property type="entry name" value="Berberine bridge enzyme-like 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="8">
        <location>
            <begin position="89"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW30992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="539" mass="59983" checksum="39DE6D6964321683" modified="2014-02-19" version="1">MFPFVEKMRKETTMANSMAKLFFLLVTVFTSIFPAATSTSAGFEQGFLQCFQAILGNNTTSEVTFSKSSSSYEPLLNSSIRNARFLSSSVPKPNVIVTPQSLFHIQVALLCSKKNNLEVRVRSGGHDYEGLSYVSHVPFLIIDLVNLRSIEINMDEESAWVQSGATVGELYYAIAQKSKVHGFPAGSCSTMGVGGHFSGGGFGTIFRKYGLASDNVIDAQIIDVNGKILNRTLMGEDLFWAIRGGGGSSFGVITAWKIKLVHVPSTVTVFDVSRSLDQGATDLFHKWQTVAPKLPAELFLHNVVGVSNSASQGGKTVVVYFTGLYLGTAENLLPLMQNNFSELGLQHNNFSQMTWIQSVLHFAGYSIDESLEVLLRRNQTSSSFKAKSDYVKEPIPLVGLEGLWNMLLSENSPLLIFTPYGGKMSEISESETPFPHRKGNLYGIQYSVNLVSNEEAPKHLDWMRRLYEYMTPYVSKLPRQSYLNYRDLDLGVNQGKLNYENAKSWGLKYFKNNFEKLTQVKARVDPGNFFRDEQSIPPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLE7</accession>
    <name>V7CLE7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G203900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLE7"/>
    <dbReference type="STRING" id="3885.V7CLE7"/>
    <dbReference type="Gramene" id="ESW31037">
        <property type="protein sequence ID" value="ESW31037"/>
        <property type="gene ID" value="PHAVU_002G203900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2205">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ITMKRED"/>
    <dbReference type="OrthoDB" id="273452at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW31037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="95" mass="11351" checksum="4EDEC9ED86F5EAFB" modified="2014-02-19" version="1">MFRRLRWFVGLNHKNWSTKRLVNVEHQHPGSARPNQLPVLDAVHEVAIYIHRFHNLDLFEQGWYKIKITMKREDGEDSYPGIPARVVQYEGDFYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMW8</accession>
    <name>V7CMW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Caffeoyl-CoA O-methyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G1740001g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Methylates caffeoyl-CoA to feruloyl-CoA and 5-hydroxyferuloyl-CoA to sinapoyl-CoA. Plays a role in the synthesis of feruloylated polysaccharides. Involved in the reinforcement of the plant cell wall. Also involved in the responding to wounding or pathogen challenge by the increased formation of cell wall-bound ferulic acid polymers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMW8"/>
    <dbReference type="STRING" id="3885.V7CMW8"/>
    <dbReference type="Gramene" id="ESW30683">
        <property type="protein sequence ID" value="ESW30683"/>
        <property type="gene ID" value="PHAVU_002G1740001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1663">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRVESTI"/>
    <dbReference type="OrthoDB" id="10251242at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008171">
        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050362">
        <property type="entry name" value="Cation-dep_OMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002935">
        <property type="entry name" value="SAM_O-MeTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10509">
        <property type="entry name" value="O-METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10509:SF34">
        <property type="entry name" value="TAPETUM-SPECIFIC METHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01596">
        <property type="entry name" value="Methyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51682">
        <property type="entry name" value="SAM_OMT_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="96" mass="11073" checksum="F4FF1E20DE928E24" modified="2014-02-19" version="1" fragment="single">GKHGESFDFVFVDAEKENFIEFHEVLLKLVKKGGTIAYDNTLWLGTVAMSEDEKIEDKWWKKRKPTLEFNTYIADDCRVESTIVSIGDGVTLCRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP60</accession>
    <name>V7CP60_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">60S ribosomal protein L17-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G174200g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP60"/>
    <dbReference type="SMR" id="V7CP60"/>
    <dbReference type="STRING" id="3885.V7CP60"/>
    <dbReference type="Gramene" id="ESW30686">
        <property type="protein sequence ID" value="ESW30686"/>
        <property type="gene ID" value="PHAVU_002G174200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3353">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPMISCK"/>
    <dbReference type="OrthoDB" id="10254664at2759"/>
    <dbReference type="PhylomeDB" id="V7CP60"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002181">
        <property type="term" value="P:cytoplasmic translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.470.10:FF:000005">
        <property type="entry name" value="60S ribosomal protein L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="entry name" value="Ribosomal protein L22/L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_A">
        <property type="entry name" value="Ribosomal_uL22_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_uL22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057265">
        <property type="entry name" value="Ribosomal_uL22_arc-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018260">
        <property type="entry name" value="Ribosomal_uL22_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005721">
        <property type="entry name" value="Ribosomal_uL22_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_uL22_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003260">
        <property type="entry name" value="PRK04223.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01038">
        <property type="entry name" value="uL22_arch_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11593:SF47">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL22Y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="Ribosomal protein L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00464">
        <property type="entry name" value="RIBOSOMAL_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="153"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="153"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="165"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW30686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="20578" checksum="E16875FA4E560BB3" modified="2014-02-19" version="1">MVKYSREPNNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVRKEPETNLATSKKSQALRSGASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSR9</accession>
    <name>V7CSR9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CRC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G3121000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the lin-54 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSR9"/>
    <dbReference type="STRING" id="3885.V7CSR9"/>
    <dbReference type="Gramene" id="ESW32320">
        <property type="protein sequence ID" value="ESW32320"/>
        <property type="gene ID" value="PHAVU_002G3121000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1171">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DQNNNMV"/>
    <dbReference type="OrthoDB" id="6283463at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005172">
        <property type="entry name" value="CRC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028307">
        <property type="entry name" value="Lin-54_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033467">
        <property type="entry name" value="Tesmin/TSO1-like_CXC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12446:SF34">
        <property type="entry name" value="PROTEIN LIN-54 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12446">
        <property type="entry name" value="TESMIN/TSO1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03638">
        <property type="entry name" value="TCR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01114">
        <property type="entry name" value="CXC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51634">
        <property type="entry name" value="CRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CRC" evidence="5">
        <location>
            <begin position="22"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="280"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="428"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="282"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="294"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="323"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="436"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW32320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="483" mass="52280" checksum="510A2592048A30D9" modified="2014-02-19" version="1" fragment="single">KPESPKSRPRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCEGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGFSSPPISKKRKGQELLFGSAIKDPSLGRLGQQANNVRVPAPSSSLSPIPGARVGPSTLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKNLMDKHGEDHTETSLASSTQEQLPNQKEANVEKPMADDDCLSANQTDKISPENSCSDGADVPKGRPMSPGTLALMCDEQDTMFMTSASPIGSRAHACNTSSQPQYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKEPNNNCTGNASTTETDHQQGTTNNGVAKAAGSITSTSSFPGGSLIPEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CTW1</accession>
    <name>V7CTW1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G085300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CTW1"/>
    <dbReference type="STRING" id="3885.V7CTW1"/>
    <dbReference type="Gramene" id="ESW33622">
        <property type="protein sequence ID" value="ESW33622"/>
        <property type="gene ID" value="PHAVU_001G085300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWVEIKH"/>
    <dbReference type="OrthoDB" id="1882346at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000227">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g13880"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000031">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001404">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001790">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein At2g01510"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001694">
        <property type="entry name" value="putative pentatricopeptide repeat-containing protein At2g01510 isoform X7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046849">
        <property type="entry name" value="E2_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF475">
        <property type="entry name" value="DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20430">
        <property type="entry name" value="Eplus_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="119"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="150"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="251"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="352"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="453"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="523"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="554"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="625"/>
            <end position="655"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="770"/>
            <end position="862"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW33622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="862" mass="97705" checksum="7959186AC66D9710" modified="2014-02-19" version="1">MLIFETNGTLRIDHTLMIKSSFLTFILEKVHHIFTNPAKLGTKKELSIFRFPSMNYIKACTRKNGTLTFQKRHFQVDASIIKTGFDPNTYRFNFQVKTHILHGDLGAARKLFDEMPHRNIISTNTMITGYLNSGNLSAARSLFDGMVERSVVTWTMLIGGYAQNNKFREAFGLFVDMCRHDMAPDHVTLTTLLSGFTEFDNVNEVAQVHAHVVKLGYDSTLTVCNSLLDSYCKTRSLGLACHLFKHMPEKDNVTFNVLLTGYSKEGFNHEAINLFFKMQNLGFKPTDFTFAAVLTSGIQLNDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRVVEVRKLFYEMPEVDGISYNVIITCCAWNERVEESLELFRDLQFTRFDRRQFPFATLLSITANALNLEVGRQIHSQAIVTDAISEILVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDSLKLFVEMQRAKIRADSATYASILRACANLASLTLGKQLHSHIIRSGCISNVFSGSALVDMYAKCGSIKEALHMFQEMPTRNCVTWNALISAYAQNGDGGLALRSFEQMVHSGLQPNSVSFLSILCACSHCGLVEEGLQYFSSMTQVYKFVPKREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEVMWTSILNSCRIHKNQEMGKRAADQLFSMKILRDAAPYVSLSNIYAAAGEWENVGKVKKAMRERGVRKVPAYSWVEIKQMTHVFSANDMSHPQMKEITKMLDELEEQMEKQGYKPDSSCALHNVDEEVKLESLKYHSERIAIAFALISTPEGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFRDGSCSCKDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU67</accession>
    <name>V7CU67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G092100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU67"/>
    <dbReference type="SMR" id="V7CU67"/>
    <dbReference type="STRING" id="3885.V7CU67"/>
    <dbReference type="Gramene" id="ESW33707">
        <property type="protein sequence ID" value="ESW33707"/>
        <property type="gene ID" value="PHAVU_001G092100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SAT2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNFQTSA"/>
    <dbReference type="OrthoDB" id="652307at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021775">
        <property type="entry name" value="DUF3339"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128">
        <property type="entry name" value="OS05G0103400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33128:SF49">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11820">
        <property type="entry name" value="DUF3339"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="69" mass="7459" checksum="DB963AD95360C993" modified="2014-02-19" version="1">MGDWAGVVIGLVLFVVFSPGLLFQLPGKGRPVDFCNFQTSAISIFVHSLLFFGFMVIFLIAINVHIGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV63</accession>
    <name>V7CV63_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Protein DETOXIFICATION</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Multidrug and toxic compound extrusion protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G017400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV63"/>
    <dbReference type="SMR" id="V7CV63"/>
    <dbReference type="Gramene" id="ESW32791">
        <property type="protein sequence ID" value="ESW32791"/>
        <property type="gene ID" value="PHAVU_001G017400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1347">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCSHAFG"/>
    <dbReference type="OrthoDB" id="2126698at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13132">
        <property type="entry name" value="MATE_eukaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045069">
        <property type="entry name" value="MATE_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11206">
        <property type="entry name" value="MULTIDRUG RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="116"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="208"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="245"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="331"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="372"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="404"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="434"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW32791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="481" mass="51898" checksum="9E78E6F911923F63" modified="2014-02-19" version="1">MESPLLEHNENSDIGEEKTVKSAVKNFGFESKKLWRLAGPAILTSVFQYSLGALTQTFAGQVGDLDLAAVSVENSVVAGLAFGVMLGMGSALETLCGQAFGAGQIRMLGVYMQRSWVILFITALLMLPIYVCSPPILVLLGQTSQISTAAGKFAVWMIPQLFAYALNFPIQKFLQAQGKVLVMLWVSGGVLVLHTFFSWLLILKLEWGLIGAAITLNTSWWLIVIAQLLYIFITKSDGAWSGFTWLAFVDLFGFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAARFSVWVVSITSVAIGVVAMIVVLSTKDYFPYLFTSTTAVAIETTKLAGLLGITVLLNSLQPVLSGVAVGAGWQSLVAYINIGCYYVFGLPAGIVLGFVLNFGVEGIWSGMIGGIVLQTTILIIVTSLTNWKKEAEEAGSRVRKWGGSVAHDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWU7</accession>
    <name>V7CWU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Flavin-containing monooxygenase</fullName>
            <ecNumber evidence="11">1.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_001G168000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>indole-3-pyruvate + NADPH + O2 + H(+) = (indol-3-yl)acetate + CO2 + NADP(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34331"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17640"/>
            <dbReference type="ChEBI" id="CHEBI:30854"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.14.13.168"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Plant hormone metabolism; auxin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the FMO family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="11"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWU7"/>
    <dbReference type="SMR" id="V7CWU7"/>
    <dbReference type="STRING" id="3885.V7CWU7"/>
    <dbReference type="Gramene" id="ESW34637">
        <property type="protein sequence ID" value="ESW34637"/>
        <property type="gene ID" value="PHAVU_001G168000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1399">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTMGKTP"/>
    <dbReference type="OrthoDB" id="66881at2759"/>
    <dbReference type="PhylomeDB" id="V7CWU7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103075">
        <property type="term" value="F:indole-3-pyruvate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004499">
        <property type="term" value="F:N,N-dimethylaniline monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009851">
        <property type="term" value="P:auxin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.60:FF:000100">
        <property type="entry name" value="Flavin-containing monooxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050982">
        <property type="entry name" value="Auxin_biosynth/cation_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020946">
        <property type="entry name" value="Flavin_mOase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539">
        <property type="entry name" value="FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43539:SF11">
        <property type="entry name" value="INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00743">
        <property type="entry name" value="FMO-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00469">
        <property type="entry name" value="PNDRDTASEII"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0073">Auxin biosynthesis</keyword>
    <keyword evidence="5 11" id="KW-0274">FAD</keyword>
    <keyword evidence="4 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 11" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="7 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW34637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="423" mass="47571" checksum="46F020DC6EEB0743" modified="2014-02-19" version="1">MENLFRLVDHEDFFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFVLLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYARHFEINPQFNECVQSARYDETSGLWRVKTVSSTGATRNEVEYICRWLVVATGENAECVMPEIEGLSDFKGEIIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREIFGKSTFEFAVMMLQWLPLWLVDKIILILAWFVLGNVEKLGLKRPATGPLELKNTKGKTPVLDLGALEKIRSGEIKVVPGVKRFNNGEAELVNGEKLDVDAVVLATGYRSNVPYWLQEGEFFSKNGYPKTSFPHGWKGNAGLYAVGFTKRGLSGASSDALKIAQDIGKVWKNETKQKKQRTTACHRRCISQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWZ8</accession>
    <name>V7CWZ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Wall-associated receptor kinase galacturonan-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G070100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWZ8"/>
    <dbReference type="Gramene" id="ESW33446">
        <property type="protein sequence ID" value="ESW33446"/>
        <property type="gene ID" value="PHAVU_001G070100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYCKEDT"/>
    <dbReference type="OrthoDB" id="1513794at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33138:SF30">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33138">
        <property type="entry name" value="OS01G0690200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756267" description="Wall-associated receptor kinase galacturonan-binding domain-containing protein" evidence="3">
        <location>
            <begin position="23"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="Wall-associated receptor kinase galacturonan-binding" evidence="4">
        <location>
            <begin position="23"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW33446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="273" mass="31611" checksum="E9F6D07F319F86B6" modified="2014-02-19" version="1">MWRERALIILVFLLHLIHGEDACPSSSCGKISNISYPFRLKGDAKGCGLTGYELSCKNNIALFSLYSGTFHVQAINYNNFTIRVVDPGLQQTNCSSLPRYFFSPSNFTNSYQLIPPFHRYYRPKDSSLYQTIHWVDWYYRTEPLVYEHIVFLNCSHRVIGKLKYVDTDGCLNWESKGYIYAIAGDLIAEDFEVGCHVKLVSPTSWRGLDTNTYFYDMMHTALLYGFEHSWIPLACEGRCVDYYNCYFSSSSQTLECYNEEPLKPSWGLYVLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXW5</accession>
    <name>V7CXW5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">U-box domain-containing protein</fullName>
            <ecNumber evidence="5">2.3.2.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">RING-type E3 ubiquitin transferase PUB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G196000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="5"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXW5"/>
    <dbReference type="SMR" id="V7CXW5"/>
    <dbReference type="Gramene" id="ESW34969">
        <property type="protein sequence ID" value="ESW34969"/>
        <property type="gene ID" value="PHAVU_001G196000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR1A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AWCTMNA"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000437">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045185">
        <property type="entry name" value="PUB22/23/24-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849:SF132">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE PUB23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22849">
        <property type="entry name" value="WDSAM1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="6">
        <location>
            <begin position="6"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU369093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW34969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="418" mass="46436" checksum="21B559B4FD852FDC" modified="2014-02-19" version="1">MDNDIDVPSFFLCPISLQIMKDPVTVSTGITYDRECIETWLFSRKNTTCPITKQPLTDYTDLTPNHTLRRLIQAWCTMNASHGIERIPTPKPPVNKTQISKLLKDASHSPLTCLRRLKSIASGSETNKRCMEAAGAVEFLASIVVNNNNDSSNGVDPNDGSGFELKTTASDEALSLLHTLDLSEQGLKTLISFRNGDFIESLTRVMQKGFFESRAYAVFLLKSMSEVADPVKLLHLRQELFVELVQVLKDQISTKTSKDIIQTLIQFSPWGRNRIKAVEAGTVPVLIELLLDCKDRKPCEMMLVLLEILCQCAEGRAELLSHGAGLAIVSKKILRVSTLANDRAVRILLCVSKFSATPHVVQEMLKLGVVAKLCLVLQVDSGNKAKEKAREILKLHARVWKNTPCIPNNMLSSYPAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYL6</accession>
    <name>V7CYL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G214000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYL6"/>
    <dbReference type="SMR" id="V7CYL6"/>
    <dbReference type="Gramene" id="ESW35184">
        <property type="protein sequence ID" value="ESW35184"/>
        <property type="gene ID" value="PHAVU_001G214000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QRITEYH"/>
    <dbReference type="OrthoDB" id="1896970at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000051">
        <property type="entry name" value="Receptor-like serine/threonine-protein kinase ALE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000299">
        <property type="entry name" value="Receptor-like serine/threonine-protein kinase ALE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057597">
        <property type="entry name" value="ALE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF25">
        <property type="entry name" value="PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23180">
        <property type="entry name" value="ALE2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="263"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="336"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="364"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW35184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="680" mass="74248" checksum="B542D6B5C986AB96" modified="2014-02-19" version="1">MSIGLKMFQGLLLKWMLILSCLAFMIVVGENDKTMELPSLYDSRSPLAFAVVHGLHLPASLHLSKHELSQAAPIEALSPVIPPSYGPFSTAGPSVSTQPPLSPYASNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQNPSWNDFLNELAVQLGLRNTQIELINFYVLGVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPTLAASPVKTPLYHSPTATSSSSSSSGRHSNLFIILGIAIGIIFIGIISVLIFCLCTFLPKANAPPVETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFQGVLNDGTPVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRANLRQSSSTFEFDGASSVFSSGPYSGLSAFENDNISRTVVFSEDLCEGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZR9</accession>
    <name>V7CZR9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G250400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZR9"/>
    <dbReference type="SMR" id="V7CZR9"/>
    <dbReference type="STRING" id="3885.V7CZR9"/>
    <dbReference type="Gramene" id="ESW35624">
        <property type="protein sequence ID" value="ESW35624"/>
        <property type="gene ID" value="PHAVU_001G250400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2796">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FYPELYG"/>
    <dbReference type="OrthoDB" id="428342at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000702">
        <property type="entry name" value="Trafficking protein particle complex subunit 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21581">
        <property type="entry name" value="D-ALANYL-D-ALANINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21581:SF6">
        <property type="entry name" value="TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW35624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="361" mass="40992" checksum="AB34D0F91705FE1E" modified="2014-02-19" version="1">MESESEITDSQPHPLSNQIVDACHDMNSLEDLANRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYQYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGMDRFYTLLDFVRGKIREKGNDNKLGVSLKLWRKREVFVVNCIIGHHLSQKEFGVCLSLMKELLSRDDGSDPVLVSQLGYMQLQIGDLEGAKVSFLKVESEGKNNGSLSEVEFNNLVNRNKALVYLVGKDYVSAVREYEECIERDSADIVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDASCTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0L1</accession>
    <name>V7D0L1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G172200g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. GCN2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0L1"/>
    <dbReference type="SMR" id="V7D0L1"/>
    <dbReference type="STRING" id="3885.V7D0L1"/>
    <dbReference type="Gramene" id="ESW34686">
        <property type="protein sequence ID" value="ESW34686"/>
        <property type="gene ID" value="PHAVU_001G172200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1335080at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004713">
        <property type="term" value="F:protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050339">
        <property type="entry name" value="CC_SR_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11042">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11042:SF185">
        <property type="entry name" value="WEE1-LIKE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="182"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="60"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00037982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW34686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="39160" checksum="C068CA21F1877D2F" modified="2014-02-19" version="1">MGKEKEQEELVPSTVTADEVNHDDLILSQDLFCTPDYLTPENQFPLKGFHFSVDMEEEEDYPYPKSLEKPNTSKTKRRRMDDGISGDTLSSMSSGDGQAIVELGMDFVGEEVEYKLRARSYVSRSAIALRCRVMPPACTRNNFMTSLSEEELYPFRLQNSKCADLFPSLTRGNGQSRYHNDFYQYEQIGRGNFSNVYKVLKQLDGCLYVVKCTTKKLGSGRERIKAYTEVQSMVAIGFHENIVGYYSLWSDNGQLYIQLELCDHSLSTKNCPALLTERHEIEALYQVACALQFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNNMFIAEGEPTRGRSASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P070</accession>
    <name>A0ACC3P070_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L000462</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967771">
        <property type="protein sequence ID" value="KAK6645866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="378" mass="41225" checksum="C014BC73FBFE4073" modified="2026-01-28" version="1">MANKLIKQMGLPKSIANIFTARNIITAKDALSHTEFELMELLDVDKEEVTSAMAHVSEVVCPPCQTALLLLEQRVRNETLAGHLPTHLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPASCGGLDGRVIYIDIESKFRSKRLIEIGINSFPEIFLKKGMAQEMAGRILVLRPTSLSEFAESLYQIKVSLLQQQVKLLIIDSMAALVLGEHECGTSRQQALGVHVSFIKSLAEFSRIPVILTNQVRSQFGDESRMYSFQAQSRSTIKDNPATYDSHLVAALGINWAHAVTIRLVLEARSGQRFIKLAKSPISPPLAFPFKITSSGVVLLDDDGIEMKGSEINTIQCQGLSLSSLAVNSMEYVLCTKNT</sequence>
</entry>
<entry dataset="Swiss-Prot" created="2005-07-05" modified="2026-01-28" version="78" xmlns="https://uniprot.org/uniprot">
    <accession>Q69F95</accession>
    <accession>V7B0S8</accession>
    <name>C85A_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cytochrome P450 85A</fullName>
            <shortName evidence="5">PvCYP85A</shortName>
            <ecNumber evidence="3">1.14.14.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">C6-oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">CYP85A</name>
        <name evidence="7" type="ordered locus">PHAVU_008G028800g</name>
        <name evidence="5" type="ORF">BA13</name>
    </gene>
    <organism>
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference key="1">
        <citation type="journal article" date="2004" name="Theor. Appl. Genet." volume="109" first="690" last="699">
            <title>The anthracnose resistance locus Co-4 of common bean is located on chromosome 3 and contains putative disease resistance-related genes.</title>
            <authorList>
                <person name="Melotto M."/>
                <person name="Coelho M.F."/>
                <person name="Pedrosa-Harand A."/>
                <person name="Kelly J.D."/>
                <person name="Camargo L.E."/>
            </authorList>
            <dbReference type="PubMed" id="15221144"/>
            <dbReference type="DOI" id="10.1007/s00122-004-1697-6"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
    </reference>
    <reference key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain>cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the C6-oxidation step in brassinosteroids biosynthesis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Membrane</location>
            <topology evidence="4">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the cytochrome P450 family.</text>
    </comment>
    <comment type="sequence caution" evidence="6">
        <conflict type="erroneous gene model prediction">
            <sequence resource="EMBL-CDS" id="AAR13307" version="1"/>
        </conflict>
    </comment>
    <dbReference type="EC" id="1.14.14.-" evidence="3"/>
    <dbReference type="EMBL" id="AY341443">
        <property type="protein sequence ID" value="AAR13307.1"/>
        <property type="status" value="ALT_SEQ"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="Q69F95"/>
    <dbReference type="SMR" id="Q69F95"/>
    <dbReference type="STRING" id="3885.V7B0S8"/>
    <dbReference type="EnsemblPlants" id="ESW11424">
        <property type="protein sequence ID" value="ESW11424"/>
        <property type="gene ID" value="PHAVU_008G028800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11424">
        <property type="protein sequence ID" value="ESW11424"/>
        <property type="gene ID" value="PHAVU_008G028800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SIAQPFM"/>
    <dbReference type="OrthoDB" id="1372046at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016132">
        <property type="term" value="P:brassinosteroid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010268">
        <property type="term" value="P:brassinosteroid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009416">
        <property type="term" value="P:response to light stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016125">
        <property type="term" value="P:sterol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11043">
        <property type="entry name" value="CYP90-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000045">
        <property type="entry name" value="Cytochrome P450 85A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286">
        <property type="entry name" value="CYTOCHROME P450 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286:SF388">
        <property type="entry name" value="CYTOCHROME P450 85A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword id="KW-0349">Heme</keyword>
    <keyword id="KW-0408">Iron</keyword>
    <keyword id="KW-0472">Membrane</keyword>
    <keyword id="KW-0479">Metal-binding</keyword>
    <keyword id="KW-0503">Monooxygenase</keyword>
    <keyword id="KW-0560">Oxidoreductase</keyword>
    <keyword id="KW-1185">Reference proteome</keyword>
    <keyword id="KW-0812">Transmembrane</keyword>
    <keyword id="KW-1133">Transmembrane helix</keyword>
    <feature type="chain" id="PRO_0000052173" description="Cytochrome P450 85A">
        <location>
            <begin position="1"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="2"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="2">
        <location>
            <position position="414"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="sequence conflict" description="In Ref. 1; AAR13307." evidence="6" ref="1">
        <original>L</original>
        <variation>F</variation>
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="sequence conflict" description="In Ref. 1; AAR13307." evidence="6" ref="1">
        <original>R</original>
        <variation>Q</variation>
        <location>
            <position position="232"/>
        </location>
    </feature>
    <feature type="sequence conflict" description="In Ref. 1; AAR13307." evidence="6" ref="1">
        <original>N</original>
        <variation>S</variation>
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000250" key="1"/>
    <evidence type="ECO:0000250" key="2">
        <source>
            <dbReference type="UniProtKB" id="P04798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000250" key="3">
        <source>
            <dbReference type="UniProtKB" id="Q9FMA5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000255" key="4"/>
    <evidence type="ECO:0000303" key="5">
        <source>
            <dbReference type="PubMed" id="15221144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000305" key="6"/>
    <evidence type="ECO:0000312" key="7">
        <source>
            <dbReference type="EMBL" id="ESW11424.1"/>
        </source>
    </evidence>
    <sequence length="466" mass="53541" checksum="ABD38623A581ED42" modified="2022-05-25" version="3">MALFMAILGVLVLLLCLCSALLKWNEVRFRRKGLPPGAMGWPVFGETTEFLKQGPNFMKNKRARYGSFFKSHILGCPTIVSMDPELNRFILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLMDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSIAQPFMTEFFKLVLGTLSLPINLPRTNYRGGLQARKSIISILSRLLEERKASQDVHVDMLGCLMKKDENRYKLNDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSFSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEQ6</accession>
    <name>V7AEQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Copper transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G060400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEQ6"/>
    <dbReference type="STRING" id="3885.V7AEQ6"/>
    <dbReference type="Gramene" id="ESW04019">
        <property type="protein sequence ID" value="ESW04019"/>
        <property type="gene ID" value="PHAVU_011G060400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3386">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LWKTIVH"/>
    <dbReference type="OrthoDB" id="73901at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005375">
        <property type="term" value="F:copper ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007274">
        <property type="entry name" value="Cop_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12483:SF24">
        <property type="entry name" value="COPPER TRANSPORTER 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12483">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04145">
        <property type="entry name" value="Ctr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0186">Copper</keyword>
    <keyword evidence="3 6" id="KW-0187">Copper transport</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="150" mass="16684" checksum="C9DAFCAC7D1EC8EA" modified="2014-02-19" version="1">MDEHMHGMGGMAPSPPTTNDTMMHSKMMIHMTFFWGKDTEILFQNWPGGKSDMYVLALVVVFLMSVFVQLLSHTRFIKPGSDHILAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLISTYAFNKSPHKDGFDLPPISC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFB8</accession>
    <name>V7AFB8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_011G022600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RETICULATA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFB8"/>
    <dbReference type="STRING" id="3885.V7AFB8"/>
    <dbReference type="Gramene" id="ESW03543">
        <property type="protein sequence ID" value="ESW03543"/>
        <property type="gene ID" value="PHAVU_011G022600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQX6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANFFARC"/>
    <dbReference type="OrthoDB" id="205639at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031969">
        <property type="term" value="C:chloroplast membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021825">
        <property type="entry name" value="RETICULATA-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31620">
        <property type="entry name" value="PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31620:SF14">
        <property type="entry name" value="PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11891">
        <property type="entry name" value="RETICULATA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="10"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="9">
        <location>
            <begin position="55"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="68"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW03543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="360" mass="38306" checksum="16FEA4E884772193" modified="2014-02-19" version="1">MSIALSFFTPPSSSSSSLSSSKSIPSLSLSSSISFRLPRAADRFFPLRSTGGGFGGGSSGGHGGHGGGGDDEHGNEGGKNEALMVVAEAGRALESVPADLAAAVKEGKIPAAVMTRFFELEKSAFFRWLLQFPGFRERLLADDLFLAKVAMECGVGVFTKTAAEYDRRRENFFNELEIVFADVAMAIIADFMLVYLPAPTVALRPPLAGTAGPIAKFFHGCPDNAFQVALSGTSYSLIQRIGAIVRNGSKLFAVGTASSLVGTAMTNALINAKKAVKNSSEGEIENVPILSTSAAYGVYMSISSNLRYQVVAGIFEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARWVGVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFU7</accession>
    <name>V7AFU7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FAD/NAD(P)-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G098300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Putative FAD-dependent oxidoreductase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the FAD-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFU7"/>
    <dbReference type="SMR" id="V7AFU7"/>
    <dbReference type="STRING" id="3885.V7AFU7"/>
    <dbReference type="Gramene" id="ESW04482">
        <property type="protein sequence ID" value="ESW04482"/>
        <property type="gene ID" value="PHAVU_011G098300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAVTHQL"/>
    <dbReference type="OrthoDB" id="202203at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.50.100:FF:000006">
        <property type="entry name" value="apoptosis-inducing factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43735">
        <property type="entry name" value="APOPTOSIS-INDUCING FACTOR 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43735:SF3">
        <property type="entry name" value="FERROPTOSIS SUPPRESSOR PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00368">
        <property type="entry name" value="FADPNR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD/NAD(P)-binding" evidence="6">
        <location>
            <begin position="9"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00057036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="366" mass="40769" checksum="FBAB6D1972B232DA" modified="2014-02-19" version="1">MENHVGKKRVVIIGGGVAGSLVAKSLQFTTHVTLIDSKEYFEITWASLRSRVEPSFAERSVINHQDYLTHGNIITSSAVDITETEVITEDGHKIGFDYLVIATGHADEVPKNRTERLNQFKEDNERIKSARSILIVGGGPTGVELAAEIAVDFPNKKVTIVHKGPRLLDFVGTKAADKTLKWLESKNVEVKLEQTIDVNELACEHKTYRTSNGETVEADCYFQCLGKPLASAWLEETMLKYDLDDEGRIKVDEKLRVTGRRNIFAIGDITDVPEIKQGFAAQQHAEVVVKNLKVMIDGGRDCSQCRMENYKPQMPMAIVSLGRRDAVAQLPLLTVIGRVPGFIKSGDLFVGRTRRQMGLDPRIKHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIR3</accession>
    <name>V7AIR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">MYND-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G179600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIR3"/>
    <dbReference type="SMR" id="V7AIR3"/>
    <dbReference type="STRING" id="3885.V7AIR3"/>
    <dbReference type="Gramene" id="ESW05444">
        <property type="protein sequence ID" value="ESW05444"/>
        <property type="gene ID" value="PHAVU_011G179600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1327">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4674">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SVKCLIM"/>
    <dbReference type="OrthoDB" id="5855668at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="6.10.140.2220:FF:000006">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.2220">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002893">
        <property type="entry name" value="Znf_MYND"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12298">
        <property type="entry name" value="PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12298:SF4">
        <property type="entry name" value="PROGRAMMED CELL DEATH PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01753">
        <property type="entry name" value="zf-MYND"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144232">
        <property type="entry name" value="HIT/MYND zinc finger-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50865">
        <property type="entry name" value="ZF_MYND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="MYND-type" evidence="8">
        <location>
            <begin position="124"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="MYND-type" evidence="8">
        <location>
            <begin position="216"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="7">
        <location>
            <begin position="504"/>
            <end position="537"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="85"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="387"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="85"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW05444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="549" mass="63114" checksum="618C5062484D9368" modified="2014-02-19" version="1">MPAYGASFDLKWLLGLLGLGEKGAPISDDNSIKTWLQILLLTLVIGILWILYELTDDRENNHNVNEVDELEEMDHPTHELDHFYESQQREQEHPNGELDHHFDEEDSHRATVSGGNDGRRHRGCAFCGNSSTTRCSRCKAVRYCSVKCQIMHWRSRHRYECCESEIAADEEQRTEDETTSNLVESSEMESSHVEDGALWTSESDMAMEVSSNLHSCKVCGSPSTTRCPRCKAIQYCSMKCLIMDWKWHKVDCIARVDLTPKERPKDVGMLQNSYEEEDNVKSSGPLSLECHPAGSTSLKSPIEASQGPTNKVLLYLMDEVAKSRKETLLLQSKLDEWKNLANFEREKNQSIKRQSNYQLLVLKKEKESISDAEKKAYHVIHSLHKRLNHLQNSVQENNTEKRKLEEYVQCLESECADLKKLLQEEQKRVQNLTMECGKSQEAAKMAMKEVEAVRQEIQEKREHSQHLKENFRRDLIFAESRATIAEEKLSELYKKIRMSDYKLCSICLSNDNDLAFGCGHMTCRDCGSKLSRCPICRELITNHIKLFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ74</accession>
    <name>V7AJ74_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G168900g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ74"/>
    <dbReference type="SMR" id="V7AJ74"/>
    <dbReference type="Gramene" id="ESW05305">
        <property type="protein sequence ID" value="ESW05305"/>
        <property type="gene ID" value="PHAVU_011G168900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1730639at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ATL42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46539:SF1">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE ATL42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="11">
        <location>
            <begin position="64"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="15118" checksum="CE36B2426CA20B38" modified="2014-02-19" version="1">MKLAYIFLIVFIILFFFVVRLVFFYIQRRFSSTNFEAGDIHGQAVSNPVASRSLTVVAETAGECTICLEGVGEGEEVKMTTHCKHTFHANCFDSWLENHVTCPVYRYSEMSGEEELVTMGGGEEEDAEVSGTNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJL6</accession>
    <name>V7AJL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G148000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
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            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>indigoferoid/millettioid clade</taxon>
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            <taxon>Phaseolus</taxon>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
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            <strain evidence="9">cv. G19833</strain>
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    </evidence>
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        <source>
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    </evidence>
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    <sequence length="356" mass="39603" checksum="F18C6C6922424167" modified="2014-02-19" version="1">MDSTEDSSTSSQHQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGIQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSPMDHERDDSMDDMIGEVPPSINVGHMNARFHLSKMSTNYSGALLENDRNTLEGVVIGNGVNGISTTTSAMPSQFGTSNSKAVHLPFALSNNTSASKRTLSTLYNWNDDSDEKHFNLDCNGNVSVVRTEDNNATPGSFATLLNQLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG</sequence>
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                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
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                <person name="Moghaddam S.M."/>
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                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
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                <person name="Kelly J.D."/>
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                <person name="Wing R.A."/>
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            <strain evidence="10">cv. G19833</strain>
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</entry>
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    <accession>V7AJV9</accession>
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            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJV9"/>
    <dbReference type="SMR" id="V7AJV9"/>
    <dbReference type="STRING" id="3885.V7AJV9"/>
    <dbReference type="Gramene" id="ESW05814">
        <property type="protein sequence ID" value="ESW05814"/>
        <property type="gene ID" value="PHAVU_011G211600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2073">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MALMEEP"/>
    <dbReference type="OrthoDB" id="783251at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005811">
        <property type="term" value="C:lipid droplet"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34190">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34190:SF4">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="137" mass="15511" checksum="AE94C29E9044BF1B" modified="2014-02-19" version="1">MASATQEPILSRIDRLDYLLRQLEEIRGCNRSPKSSCASTPTSGSDGRVSSVDFSPRSLEKHCRPMESVMMETEAKGTVIERLNQAEDRLLKVFLQVEEDLLAKSNKMNNGSKKSFKELVKKCVRARRTTHNNIKEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="18" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK11</accession>
    <name>V7AK11_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G216800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK11"/>
    <dbReference type="Gramene" id="ESW05874">
        <property type="protein sequence ID" value="ESW05874"/>
        <property type="gene ID" value="PHAVU_011G216800g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="66" mass="7877" checksum="DB771E6FDE94C778" modified="2014-02-19" version="1">MLFAPRKKLFRENFSEISCKPRLSSTETCEISPYFRQFLFWVRIALKRFTQVLPYAVLHPGKEARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALE2</accession>
    <name>V7ALE2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G140700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALE2"/>
    <dbReference type="STRING" id="3885.V7ALE2"/>
    <dbReference type="Gramene" id="ESW04966">
        <property type="protein sequence ID" value="ESW04966"/>
        <property type="gene ID" value="PHAVU_011G140700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2955">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="43807at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026728">
        <property type="entry name" value="BLTP3A/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22774:SF18">
        <property type="entry name" value="AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22774">
        <property type="entry name" value="CHOREIN N-TERMINAL DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW04966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="530" mass="58993" checksum="B0E353217C6F83D0" modified="2014-02-19" version="1">MSKTNMNNTVKNSFAGARLRIENLFFSDSPSLKLRILNLKKDPACFCLWEDQPIDASQKKWTAGASQITLSLEATTDKLGHQSSLGWTSGLWRCVDLKDACIEVAMATADGSPLLKVPPPGGIVRVGVACEQYLSNTSVEQLFFVLHLYAYFGSVSEKLAIAGNNKQLKDVRNISLDGNLMDKIPSDTSASLKINNLQLQFLESSSVNSEGMPLVQFVGDDLFASATHRTLGGAIAVSSTLVWERVQIDCLDSEEQFTCENDSYFSTSENVPTISDNGHPKLRPVFWVHNKKHLHNGNVHSFPFLDIRMVQVIPFCEVDSESHTLNVSASISDVRLGGGMNYSEALLHRFGILGPDGGPGKGLSKGLENLQTGPLAKLFKTTPLIVDNLENVETTREGKRTSFSNLKKPDTVDVTIELRDWLFALEGAQDMAKRWWFSTYDANREERCWHTTFHTLRVNAKSCPKKAPERKAQSQRIQQYPVELVTVKTCILLSSKLIQCVSVKCMCKVLFTYMHDFITLSCWAATFHIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALP9</accession>
    <name>V7ALP9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="3 8">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G024500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FKBP-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3 8"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALP9"/>
    <dbReference type="SMR" id="V7ALP9"/>
    <dbReference type="STRING" id="3885.V7ALP9"/>
    <dbReference type="Gramene" id="ESW06155">
        <property type="protein sequence ID" value="ESW06155"/>
        <property type="gene ID" value="PHAVU_010G024500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0543">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FGAEGNE"/>
    <dbReference type="OrthoDB" id="1902587at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070370">
        <property type="term" value="P:cellular heat acclimation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000008">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000012">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000017">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.50.40:FF:000022">
        <property type="entry name" value="Peptidylprolyl isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050754">
        <property type="entry name" value="FKBP4/5/8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46512">
        <property type="entry name" value="PEPTIDYLPROLYL ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46512:SF11">
        <property type="entry name" value="PEPTIDYLPROLYL ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54534">
        <property type="entry name" value="FKBP-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0697">Rotamase</keyword>
    <keyword evidence="5 9" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="58"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="174"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase FKBP-type" evidence="11">
        <location>
            <begin position="291"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="9">
        <location>
            <begin position="484"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW06155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="574" mass="63920" checksum="5B922395404FF392" modified="2014-02-19" version="1">MDDDFDMPPADSMNDDFNFGGDLETPVLKVGEEKEIGQQGLKKKLLKEGEGWNTPEVGDEVQVHYTGTLLDGTKFDSSRDRGTPFGFTLGQGQVIKGWDQGIVTMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKIVTEGEKWENPKDLDEVLVNYEARLEDGTLVAKSDGVEFTVEDGYFCPALSKAVKTMKKGEKVILSVKPQYGFGEKGKPAHGDEGAVPPNASLEITLELVSWKTVSDVTDDKKVIKKILKEGEGYERPNEGAVVKLKVIGKLQDGTLFLKKGHDDEGELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYGFGSSESQQELAVVPSNSTLYYEVELVSFEKEKESWDMNTPEKIEGAGNKKEEGNALFKAGKYAKASKRYEKAVKFIEYDTSFSVEEKKSSKTLKVACNLNNAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIQLADLDLAEIDIKKALELDPDNREVKLEYKTLKEKMKEYNKKQAKFYGNMFNKLHKLDSLDNNKAESKDAQPMNVDSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMT6</accession>
    <name>V7AMT6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Replication factor A C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_010G0596002g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMT6"/>
    <dbReference type="STRING" id="3885.V7AMT6"/>
    <dbReference type="Gramene" id="ESW06585">
        <property type="protein sequence ID" value="ESW06585"/>
        <property type="gene ID" value="PHAVU_010G0596002g"/>
    </dbReference>
    <dbReference type="OMA" id="CTKVEYN"/>
    <dbReference type="OrthoDB" id="1435884at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="CDD" id="cd04481">
        <property type="entry name" value="RPA1_DBD_B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW06585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="177" mass="20214" checksum="6478D7F5AB905C2C" modified="2014-02-19" version="1" fragment="single">DIIGVLTGVGRERELRKEGRTNKLNVISIDCDGFRIQCTLFGNYVDQLNAYLAAGEVENVVIAIQFAKVKLFRDNIYIQNCIDCTKVEYNRMLESMNSPSQGLSQLCESSKQTPEDEFLHTSTRTTIAGLKDCREKCNKHIMKVTFRYKVQLRVIDETDSTTFILFDREANSLLNKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7APL7</accession>
    <name>V7APL7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G137500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APL7"/>
    <dbReference type="SMR" id="V7APL7"/>
    <dbReference type="Gramene" id="ESW07529">
        <property type="protein sequence ID" value="ESW07529"/>
        <property type="gene ID" value="PHAVU_010G137500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIIPSGW"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000140">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000185">
        <property type="entry name" value="MYB transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051953">
        <property type="entry name" value="Plant_SW-associated_TFs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997">
        <property type="entry name" value="MYB DOMAIN PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47997:SF87">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="9"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="62"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="62"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="39089" checksum="AAC51677A1EC32E4" modified="2014-02-19" version="1">MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSHQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDAIPPLATFSDFHNPSNSGSMESFFPFTANPNVILNFHHYTDQLFLPTTPSPLLQAFDHSNDIKLGLNNHNANFLHIQNPLPETTLPSSNPSSYEDTWPLACVALHLNPNEENQITKNETTSDYVLDKFINPTALQQHEYHLVEPLVPKVSENIEDYVCSIPFSSAPQEQHEATEKFQGYPQDLTVAVNQLEYIDAFMSLLPSSTTSSSVSSTQKVPYPIIPSGWEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AQQ3</accession>
    <name>V7AQQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="21">Subtilisin-like protease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_010G088700g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for arbuscular mycorrhiza (AM) development during AM symbiosis with AM fungi (e.g. Glomeromycota intraradices).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Extracellular space</location>
            <location evidence="2">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 12 13">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AQQ3"/>
    <dbReference type="SMR" id="V7AQQ3"/>
    <dbReference type="Gramene" id="ESW06938">
        <property type="protein sequence ID" value="ESW06938"/>
        <property type="gene ID" value="PHAVU_010G088700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPRW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCERGMN"/>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.2310:FF:000001">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.30.30:FF:000005">
        <property type="entry name" value="subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003137">
        <property type="entry name" value="PA_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02225">
        <property type="entry name" value="PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 12 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 12 13" id="KW-0645">Protease</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 12 13" id="KW-0720">Serine protease</keyword>
    <keyword evidence="7 14" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="14">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753658" description="Subtilisin-like protease" evidence="14">
        <location>
            <begin position="18"/>
            <end position="764"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="17">
        <location>
            <begin position="25"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="15">
        <location>
            <begin position="135"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="domain" description="PA" evidence="16">
        <location>
            <begin position="371"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="18">
        <location>
            <begin position="660"/>
            <end position="761"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="543"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW06938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="21">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="764" mass="81297" checksum="D464324F7C425389" modified="2014-02-19" version="1">MIFRALLLFLAFMVVKSVAVMEKQTYIVHMDKTKIEASVHSQDNIKPWFKSVIDFISEASLEEEERAPQLLYVYETSLFGFAAQLSNKQLEYLNQVDGFVAAIPDELLTLHTTYSPHFLGLQEGKGLWSASNLASDVIIGVLDTGIWPEHVSFQDTGLSKVPSRWKGACEAGTNFSASSCNKKLVGARVFLQGYEKFAGRINETLDYRSARDAQGHGSHTASTAAGNTVNNASFFGLASGSATGMRYTSRIAAYKVCWRLGCANSDILAAIDKAVADGVDVLSLSLGGIAKPYYNDSIAIASFGATQKGVFVSCSAGNSGPSSSTVGNVAPWIMTVAASYTDRSFPTQVKLGNGKFFKGSSLYKGKQTNQLPLVYGNSSKAQRTAQYCTKGSLDPKFVKGKIVACERGINSRTGKGEEVKMAGGAGMILLNSENQGEELFADPHVLPGTSLGASASKIIRSYIHSEKAPTASISFLGTAYGDPAPVMAAFSSRGPSAVGGDVIKPDVTAPGVNILAAWPPTTSPSMLKSDKRSALYNIVSGTSMSCPHVSGIAALIKSVHKGWSPAAIKSALMTTASISNNKGSAIADYGSKNSAFADPFAFGSGHVNPERASDPGLVYDITTKDYLNYLCSLKYTSSQIALLSKGNFKCAKKSALRAGDLNYPSFAVLFGTSALNASVRYKRIVTNVGNPKISYAVKVEEPKGVSVRVEPTNISFRKTGEKLSYKVSFVSNENTTVSGSSSFGSITWVSGKYAVRSPIAVTWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARG1</accession>
    <name>V7ARG1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G078300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARG1"/>
    <dbReference type="STRING" id="3885.V7ARG1"/>
    <dbReference type="Gramene" id="ESW06806">
        <property type="protein sequence ID" value="ESW06806"/>
        <property type="gene ID" value="PHAVU_010G078300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MLCSSED"/>
    <dbReference type="OrthoDB" id="1431846at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000010">
        <property type="entry name" value="Transcriptional activator Myb isoform A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050560">
        <property type="entry name" value="MYB_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614">
        <property type="entry name" value="MYB PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45614:SF285">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB98"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="172"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="172"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW06806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="231" mass="26349" checksum="B144F0282C9AF259" modified="2014-02-19" version="1">MEFDPCFLSGIFPKNPYLKPHTHQNMFPSQSSFLIPPSQPIMFHPNHAFYHFQNHIVNVPAHNPITAPMYGNGIPTPSLGHDGSSLTGFVNINSHQPVMLAPKNNNKIEALYDHHKGKVIWDFSQKSMVHPFEASSSKSPSPFSLSNEYGLGMSGFHRDTDPRMVEVEKNMNSNIIKGQWTPEEDSALVELVNQFGPKKWSEIAKLMCRRVGKQCRERWHNHLRPNIRIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASF6</accession>
    <name>V7ASF6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Trehalose 6-phosphate phosphatase</fullName>
            <ecNumber evidence="8">3.1.3.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G0298000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23420"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16551"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58429"/>
            <dbReference type="EC" id="3.1.3.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Glycan biosynthesis; trehalose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the trehalose phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.12" evidence="8"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASF6"/>
    <dbReference type="SMR" id="V7ASF6"/>
    <dbReference type="STRING" id="3885.V7ASF6"/>
    <dbReference type="Gramene" id="ESW08230">
        <property type="protein sequence ID" value="ESW08230"/>
        <property type="gene ID" value="PHAVU_009G0298000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1050">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENTKHME"/>
    <dbReference type="OrthoDB" id="411251at2759"/>
    <dbReference type="UniPathway" id="UPA00299"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004805">
        <property type="term" value="F:trehalose-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01627">
        <property type="entry name" value="HAD_TPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1020:FF:000004">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000073">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000099">
        <property type="entry name" value="Trehalose 6-phosphate phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1020">
        <property type="entry name" value="Trehalose-6-phosphate phosphatase related protein, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044651">
        <property type="entry name" value="OTSB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003337">
        <property type="entry name" value="Trehalose_PPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00685">
        <property type="entry name" value="T6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43768:SF48">
        <property type="entry name" value="TREHALOSE 6-PHOSPHATE PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02358">
        <property type="entry name" value="Trehalose_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW08230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="291" mass="32819" checksum="BD13DEEE7D5CF53C" modified="2014-02-19" version="1" fragment="single">MAVLSGFWGLPHKNLVKRLEGAKVGAWIDSMRASSPTRGKSESQEKRSWILYHPSALNTFEQITYNSKGKQIVVFLDYDGTLSPIVTDPDKAFMSRKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLGELYYAGSHGMDIKGPTKSRSGKQGNNKGVLFQPASQFLPMIDEVYKILLERTKSVPGAKVENNKFCLSVHFRCVDEKSWASLADKVRLVLNDYPHLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGIGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7ASY5</accession>
    <name>V7ASY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Katanin p60 ATPase-containing subunit A1</fullName>
            <shortName evidence="8">Katanin p60 subunit A1</shortName>
            <ecNumber evidence="8">5.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">p60 katanin</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">KATNA1</name>
        <name evidence="12" type="ORF">PHAVU_010G152000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>n ATP + n H2O + a microtubule = n ADP + n phosphate + (n+1) alpha/beta tubulin heterodimers.</text>
            <dbReference type="EC" id="5.6.1.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 8">Cytoplasm</location>
            <location evidence="1 8">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.6.1.1" evidence="8"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ASY5"/>
    <dbReference type="SMR" id="V7ASY5"/>
    <dbReference type="STRING" id="3885.V7ASY5"/>
    <dbReference type="Gramene" id="ESW07708">
        <property type="protein sequence ID" value="ESW07708"/>
        <property type="gene ID" value="PHAVU_010G152000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0738">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TAKMMPV"/>
    <dbReference type="OrthoDB" id="191529at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005874">
        <property type="term" value="C:microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008568">
        <property type="term" value="F:microtubule severing ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051013">
        <property type="term" value="P:microtubule severing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd21748">
        <property type="entry name" value="Kp60-NTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.60:FF:000055">
        <property type="entry name" value="Katanin p60 ATPase-containing subunit A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.80:FF:000003">
        <property type="entry name" value="Katanin p60 ATPase-containing subunit A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:003172">
        <property type="entry name" value="Katanin p60 ATPase-containing subunit A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.80">
        <property type="entry name" value="Phosphotransferase system, lactose/cellobiose-type IIA subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03023">
        <property type="entry name" value="Katanin_p60_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028596">
        <property type="entry name" value="KATNA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048611">
        <property type="entry name" value="KATNA1_MIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050304">
        <property type="entry name" value="MT-severing_AAA_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074">
        <property type="entry name" value="AAA DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23074:SF19">
        <property type="entry name" value="KATANIN P60 ATPASE-CONTAINING SUBUNIT A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21126">
        <property type="entry name" value="KATNA1_MIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 8" id="KW-0493">Microtubule</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="11">
        <location>
            <begin position="278"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="104"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="153"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="192"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="286"/>
            <end position="293"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW07708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="530" mass="57936" checksum="EAC60DE13BB2C71F" modified="2014-02-19" version="1">MVGGSLAGLQEHLKLARDYAVEGLYDTSTIFFDGALAQINKHLTTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKENPIGRRAVSPPISAKSSSFVFQPLDEYPTSSSGPGPVDDPDVWRPPSRDTSRRPARSGQVGTRKSPQDGAWARGATARSGSTGRGGAKGGAISRVNSGTRASATGKKGNVSGKSTKTDTAAVTNGQNGDSEDGKSKKGQYEGADPELAAMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFTEFGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATZ2</accession>
    <name>V7ATZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Snakin-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G016800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GASA family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATZ2"/>
    <dbReference type="SMR" id="V7ATZ2"/>
    <dbReference type="STRING" id="3885.V7ATZ2"/>
    <dbReference type="Gramene" id="ESW08083">
        <property type="protein sequence ID" value="ESW08083"/>
        <property type="gene ID" value="PHAVU_009G016800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3Z7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELCAIRC"/>
    <dbReference type="OrthoDB" id="625265at2759"/>
    <dbReference type="PhylomeDB" id="V7ATZ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003854">
        <property type="entry name" value="GASA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201">
        <property type="entry name" value="EXTENSIN, PROLINE-RICH PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23201:SF2">
        <property type="entry name" value="GIBBERELLIN-REGULATED PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02704">
        <property type="entry name" value="GASA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753746" description="Snakin-2" evidence="2">
        <location>
            <begin position="24"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW08083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="99" mass="10832" checksum="D572707858298F0A" modified="2014-02-19" version="1">MPLSKLLLASLLLSFLLFHLPEAHQTVQAQTRDSLVQQIDCNAACGARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7AUH5</accession>
    <name>V7AUH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Major facilitator superfamily (MFS) profile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_009G0305000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AUH5"/>
    <dbReference type="STRING" id="3885.V7AUH5"/>
    <dbReference type="Gramene" id="ESW08238">
        <property type="protein sequence ID" value="ESW08238"/>
        <property type="gene ID" value="PHAVU_009G0305000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0254">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GKWEVGQ"/>
    <dbReference type="OrthoDB" id="5296287at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015145">
        <property type="term" value="F:monosaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17361">
        <property type="entry name" value="MFS_STP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1250.20:FF:000931">
        <property type="entry name" value="Sugar transport protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="entry name" value="MFS general substrate transporter like domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044778">
        <property type="entry name" value="MFS_STP/MST-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045262">
        <property type="entry name" value="STP/PLT_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003663">
        <property type="entry name" value="Sugar/inositol_transpt"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00879">
        <property type="entry name" value="SP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500:SF498">
        <property type="entry name" value="MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23500">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="MFS general substrate transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="132"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="197"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="235"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="271"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="Major facilitator superfamily (MFS) profile" evidence="11">
        <location>
            <begin position="1"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW08238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39311" checksum="2682EAF6ADC836F7" modified="2014-02-19" version="1" fragment="single">ATPLYLSEVAPPKWRGAFNAGFQFFLSLGVLAAGSVNYGTAKHTWGWRVSLGLAMVPAAVMTMGALLITDTPSSLVERGKIDQARRALHKARGSSIDVEPELEALIRLSKIANSVKQEPFKTMFERKYRPHLVIGFAIPFFHQMTGISIVGFYSPNLFRSVGFGHDAALLSAVILGAVNLTSLLISSSIVDRFGRRLLFITGGICMCLCQVAVSVLLAVATGVDGTKEISKSNAVLVLVLLCFYTAGYGWSWGPLAWLIPSEIFPLKLRSTGQSIAIAVKFIVVFILSQTFLSMLCHLKFGAFLFYAGWIAVMTIFIIFFLPETKGIPLESMYTIWGKHWFWRRFVKEEADQENLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVY0</accession>
    <name>V7AVY0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_009G151100g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Secreted</location>
            <location evidence="1 12">Extracellular space</location>
            <location evidence="1 12">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVY0"/>
    <dbReference type="SMR" id="V7AVY0"/>
    <dbReference type="Gramene" id="ESW09724">
        <property type="protein sequence ID" value="ESW09724"/>
        <property type="gene ID" value="PHAVU_009G151100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXK8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMKFREM"/>
    <dbReference type="OrthoDB" id="1921208at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02241">
        <property type="entry name" value="cupin_OxOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019780">
        <property type="entry name" value="Germin_Mn-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00725">
        <property type="entry name" value="GERMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 12" id="KW-0052">Apoplast</keyword>
    <keyword evidence="6 11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 9 12" id="KW-0464">Manganese</keyword>
    <keyword evidence="5 9 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0964">Secreted</keyword>
    <keyword evidence="12" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019618630" description="Germin-like protein" evidence="12">
        <location>
            <begin position="26"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="13">
        <location>
            <begin position="66"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="11">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW09724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="231" mass="25388" checksum="C19289CB3F742531" modified="2014-02-19" version="1">MKIKSHSSFFLVFLVAITNTHVCLAECDNVKDYCPTSTQPQKQAIFINGLSCENPDSTSAHDFKSQELSKSGSRDDFGSLVKIVTASKFVGLNTLGLAIGRSDIEVDGLVNLHNHPRATEMIYVNQGRLLAAFLNTQNQLFQKTLNAGDVFVIPKGLFHFFLNRGEQVATLFSVFNSQNPGLESLSSLPSESENTLESVQKIKIKLNSLSHSQLHGDSDLTSAVLDIIYDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVZ2</accession>
    <name>V7AVZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G073900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVZ2"/>
    <dbReference type="Gramene" id="ESW08778">
        <property type="protein sequence ID" value="ESW08778"/>
        <property type="gene ID" value="PHAVU_009G073900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYEF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PQVRHIC"/>
    <dbReference type="OrthoDB" id="691329at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37613">
        <property type="entry name" value="DUF4378 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37613:SF4">
        <property type="entry name" value="DUF4378 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="361" mass="40852" checksum="A1D3F42E35C018C7" modified="2014-02-19" version="1">MASPKPKSGKPLGEFLKEQQDPFILHLYLLERGYSTNGESPKTKKREPLFQFSKLLTTLHKKFVFHTHNCIVIRNSPITNQHVHATLPAQPESSDQTIEDTDRFSFSTATNSTVYLSCSDIDEDGTSLSPEKDKALFSPNTCHGSSIGILESQQTTDNEKLQQRRLEGDSVPDCRSSMSITEATLKPDASGMEEKRSNCCVFVPKKMAEDSVLSVALWSSLMQSAKREKCSKELRELLGANADANACQVLKSKTFLLKLKQVVFYCVREISVNVWRKECREEECLKESRGGEELGKIIWWRRRELGGKETNGITNLLSLDEWSEFKPQVRHICVEIVEALLERLTQDIVTEMIQLYSAPTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYA1</accession>
    <name>V7AYA1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G220300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYA1"/>
    <dbReference type="Gramene" id="ESW10564">
        <property type="protein sequence ID" value="ESW10564"/>
        <property type="gene ID" value="PHAVU_009G220300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2469">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="409330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008253">
        <property type="term" value="F:5'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008380">
        <property type="entry name" value="HAD-SF_hydro_IG_5-nucl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103">
        <property type="entry name" value="5'-NUCLEOTIDASE DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12103:SF22">
        <property type="entry name" value="HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05761">
        <property type="entry name" value="5_nucleotid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW10564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="11713" checksum="9EA067D2451466E8" modified="2014-02-19" version="1">MLGCRLAYTHVESNVELEKESSPTDKGRWGYLSRADLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMHFRSQEQNLAHDSHTNYCSRVDKFPSNGKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYJ7</accession>
    <name>V7AYJ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="22">Cellulose synthase</fullName>
            <ecNumber evidence="22">2.4.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="ORF">PHAVU_009G205200g</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="17 22">
            <text>[(1-&gt;4)-beta-D-glucosyl](n) + UDP-alpha-D-glucose = [(1-&gt;4)-beta-D-glucosyl](n+1) + UDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19929"/>
            <dbReference type="Rhea" id="RHEA-COMP:10033"/>
            <dbReference type="Rhea" id="RHEA-COMP:10034"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18246"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.4.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="22">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="22">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 22">Glycan metabolism; plant cellulose biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 22">Cell membrane</location>
            <topology evidence="2 22">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 22">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like F subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="22">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.12" evidence="22"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYJ7"/>
    <dbReference type="SMR" id="V7AYJ7"/>
    <dbReference type="STRING" id="3885.V7AYJ7"/>
    <dbReference type="Gramene" id="ESW10390">
        <property type="protein sequence ID" value="ESW10390"/>
        <property type="gene ID" value="PHAVU_009G205200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQXZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HTRYKRI"/>
    <dbReference type="OrthoDB" id="72851at2759"/>
    <dbReference type="PhylomeDB" id="V7AYJ7"/>
    <dbReference type="UniPathway" id="UPA00695"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16617">
        <property type="entry name" value="mRING-HC-C4C4_CesA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000031">
        <property type="entry name" value="Cellulose synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.550.10:FF:000156">
        <property type="entry name" value="Cellulose synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="entry name" value="Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027934">
        <property type="entry name" value="CES_Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13301">
        <property type="entry name" value="X-BOX TRANSCRIPTION FACTOR-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14569">
        <property type="entry name" value="zf-UDP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="Nucleotide-diphospho-sugar transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 22" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="16 22" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="12 22" id="KW-0135">Cellulose biosynthesis</keyword>
    <keyword evidence="6 22" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="15" id="KW-0464">Manganese</keyword>
    <keyword evidence="14 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 22" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 22" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 22" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11 22" id="KW-0862">Zinc</keyword>
    <keyword evidence="10 22" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="753"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="783"/>
            <end position="801"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="821"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="864"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="901"/>
            <end position="923"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="935"/>
            <end position="955"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulose synthase RING-type zinc finger" evidence="24">
        <location>
            <begin position="27"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="23">
        <location>
            <begin position="581"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="23">
        <location>
            <begin position="602"/>
            <end position="614"/>
        </location>
    </feature>
    <feature type="active site" evidence="19">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <feature type="active site" evidence="19">
        <location>
            <position position="672"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>UDP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="459"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21">
        <location>
            <position position="483"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00048682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00061273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR605150-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="RuleBase" id="RU361116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="Pfam" id="PF14569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="ESW10390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="974" mass="109370" checksum="F6BEE0F24736FCE5" modified="2014-02-19" version="1">MEASTGLFAGTPNSKELVAIQGPDEPKPVKNLDGQLCEICGDSVGLTVEGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKNEQVQKGHMIHGDDNGNSKSGLAKVNGELLSTSVGEPGAKLDDKENIDEWMLRQGNLWPETDSSVDHEKAMKEPLSRKVAIPSGKLSPYRMMVVARFLLLLLFIQYRIFHPVPDAVGLWFISVTCEIWLALSWLIDQIPKWFPIDRETYLDRLSIRFEQENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFSRKWVPFCKKFSIEPRAPEKYFSEKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNSKDHPSMIQVLLPHNVGNELPCLVYTSREKRPAFQHHGKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCLDGIQGPVYVGSACIFRRKCLTGCDSPMSSKRPSMVQVHSKQDENGEEASITAATDEEKELLKSQTDDENKFRKSTLSMNSSLTEQGGVDPSSSQEVLLKEAIHVMSSKYEDRTLWGYEEGLSYGSIAADTLTSLKMHSHGWRSVYCMPKRDPFRGTAPINLTDRLNQVLRWAVGSLQILFSRHCPLLYGFNGGKLKGLQRIAYINSTVDPFSSIPLLIYCIIPAICLLTDKFITPSVGTFASLIFISLFISIFASAILELRWSGVSLEEWWRSQQFWVIGSVSANLFAVVQGIMGALPLGRVNTNFSIVSKAPDDGEFRELYTIRWTALLIPPTTIIIINLIGIVAGFTDSINSGGSSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRVDPFVLKTKGPDAKQCGISC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AYX5</accession>
    <name>V7AYX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">DDT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_009G157400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AYX5"/>
    <dbReference type="SMR" id="V7AYX5"/>
    <dbReference type="STRING" id="3885.V7AYX5"/>
    <dbReference type="Gramene" id="ESW09803">
        <property type="protein sequence ID" value="ESW09803"/>
        <property type="gene ID" value="PHAVU_009G157400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW09804">
        <property type="protein sequence ID" value="ESW09804"/>
        <property type="gene ID" value="PHAVU_009G157400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1245">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWWFRSS"/>
    <dbReference type="OrthoDB" id="332390at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000785">
        <property type="term" value="C:chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018501">
        <property type="entry name" value="DDT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053271">
        <property type="entry name" value="DDT_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028941">
        <property type="entry name" value="WHIM2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013136">
        <property type="entry name" value="WSTF_Acf1_Cbp146"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15546">
        <property type="entry name" value="BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15546:SF2">
        <property type="entry name" value="DDT DOMAIN-CONTAINING PROTEIN DDB_G0282237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02791">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10537">
        <property type="entry name" value="WAC_Acf1_DNA_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15613">
        <property type="entry name" value="WSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00571">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50827">
        <property type="entry name" value="DDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51136">
        <property type="entry name" value="WAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WAC" evidence="6">
        <location>
            <begin position="22"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="DDT" evidence="5">
        <location>
            <begin position="271"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="431"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="457"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW09803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="676" mass="79017" checksum="B52BC0E2DED648EF" modified="2014-02-19" version="1">MPLLRRKPFALAEPPNDWEPCESLFQIRFTKEIFRDYNDYLNRLNQYRQRVWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELKAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDAENISYVVAWLDESNNVIERAEVSSQDLVQKKRPFSINILKSFVRGCTYRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKTRKNEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKEYLCEFLEMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFSELVNRALGTAIVREKLDEYIIQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWRHLDQDTTVSTDNNNNSNRIQNGSIGKNRNKEIESSWQKDAWDSGIKHSNLASKMSAEELNQSAEFRKVYRKESLKQPKGDKDQSEKNYEQRREYFDREIEKWCIRTSFLGMDRYYNRYWWFYRDGRIFVESPESKEWGYYSSKGELDGLTTSLNCKGERERALLKQLNKYYSRICSELQKNSKDLLHNIALDDSVVRRSTRVRAPPRKNPAKAFLRYVNKWKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1E3</accession>
    <name>V7B1E3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G046700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1E3"/>
    <dbReference type="STRING" id="3885.V7B1E3"/>
    <dbReference type="Gramene" id="ESW11634">
        <property type="protein sequence ID" value="ESW11634"/>
        <property type="gene ID" value="PHAVU_008G046700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2918">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FACWAVI"/>
    <dbReference type="OrthoDB" id="203237at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016651">
        <property type="entry name" value="LCMT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13600">
        <property type="entry name" value="LEUCINE CARBOXYL METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13600:SF21">
        <property type="entry name" value="LEUCINE CARBOXYL METHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="50"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="15352" checksum="3ABF74651535CF5D" modified="2014-02-19" version="1">MYDSHGNTAAVQATNDDASASKLSCVKKGYMKDDYIPHISVRKPFRRSPFINLSLVVCWCFCIVCDYIGYFACWAVIWKLLYQFVDVEKKSDEDAPVKKQILSLGAGFYTTYFQLQGLFGEFGFVNNNKTRLPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1G1</accession>
    <name>V7B1G1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Subtilisin-like protease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G047700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G1"/>
    <dbReference type="STRING" id="3885.V7B1G1"/>
    <dbReference type="Gramene" id="ESW11644">
        <property type="protein sequence ID" value="ESW11644"/>
        <property type="gene ID" value="PHAVU_008G047700g"/>
    </dbReference>
    <dbReference type="OMA" id="WQKGSFG"/>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.80:FF:000002">
        <property type="entry name" value="Subtilisin-like protease SBT5.3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 9" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 9" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Inhibitor I9" evidence="11">
        <location>
            <begin position="2"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="10">
        <location>
            <begin position="111"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="12">
        <location>
            <begin position="656"/>
            <end position="751"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="8 9">
        <location>
            <position position="542"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW11644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="754" mass="80724" checksum="0FCDBE56DC4F6EB3" modified="2014-02-19" version="1" fragment="single">CYIVYLGAHSHGSTPTSVDLQIATYSHYHLLGSILGSEEKAKEAVIYSYNRHINGFAALLEEEEAAETAKNPNVVSVFLSKIHKLHTTRSWEFLGLHRNGKNSAWQKGSFGENTIIANIDTGVWPESESFSDKGYGPVPSKWRGNVCQINKPPRSKTNPCNRKLIGARFFNKAFEAYNGELVPSLQTARDFMGHGTHTLSTAGGNFVGGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPASCYGADVLAAIDQAIDDGVDVINLSAGGGYVVSPEGIFTDEVSIGAFHAISRNILLVASAGNDGPTPGSVVNVAPWVFTIAASTIDRDFSSNLTINNKQQIEGASLFVNLPPNQAFSLILSTDAKLANATFRDAQLCRRGTLDPAKVKGKIVRCFRDGKIKSVAEGNEALSSGAQGMILDNQKQNGKTTFGEPHVLSTVGTNNGHAGPQSDFYLTATDPIKSGATIRMSPARTLFGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSEFASASTLLTDNRRGFKFNVLQGTSMSCPHVSGIAGLLKTRHPSWSPAAIKSAIMTTASTRDNTNRPIRDAFAKTLATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGTHSVTDLNYPSITLPNLGLKAVTITRTVTNVGTPSTYTASANLPGYNIAVVPNSLTFSKIGEKKTFKVTVQASSVTKRRTYQFGELRWTDGKHIVRSPITVKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3P0</accession>
    <name>V7B3P0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">OTU domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G000100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3P0"/>
    <dbReference type="Gramene" id="ESW11076">
        <property type="protein sequence ID" value="ESW11076"/>
        <property type="gene ID" value="PHAVU_008G000100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQB8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWMTIPD"/>
    <dbReference type="OrthoDB" id="1416643at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="CDD" id="cd22744">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018289">
        <property type="entry name" value="MULE_transposase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003323">
        <property type="entry name" value="OTU_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052579">
        <property type="entry name" value="Zinc_finger_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31569">
        <property type="entry name" value="SWIM-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31569:SF4">
        <property type="entry name" value="SWIM-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10551">
        <property type="entry name" value="MULE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50802">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OTU" evidence="1">
        <location>
            <begin position="681"/>
            <end position="816"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="861" mass="98800" checksum="D8CC47E92837A854" modified="2014-02-19" version="1">MSKDVNMLIDGATNKSVDCSDAFNTTEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFIILGCDRSGKYRGPYKNALSRKVNGTRKCECPFRLRGKALKKAEGWIVKVMCGCHNHDLEETLAGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLERERYVYWHRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGITSTELTFSVAFAFVESERADNFTWVLQKLRGLIVKDEDIPQVIVTDRDISLMNAVQVVFPSSSNLLCRIHINKNVKAKCMSIVHPKEKQDLVMDAWDVVVNSSNENEYIQRLALFEKVCSGFPSFCEYVKKMWLIPHKEKFVTSWTNQVMHLGNTTTNRVEATNCKLKNLLQDSKTDMCSYWDAMNDMITLQHTEIKSSFEKSINVVDHMQNTPVYIKLQGFVSRSALSHITDEYDRVKTVGTDSSKCCCIVRTTHGLPCACELASYSTMCHPIPLEAIHVHWKKLNFIDRGMDDKEFELSLQPELDALLQRFQELDCAGKIILKAKLHELAFPDTASKCPTPKMVRIKRAPGSKRDRSIHCDLSHREHVDAMHPTHSGTSSCPSSHQIVHESKRRRVLPMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYAKLFGSNERVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVSLSLKESMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAESALPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPHTKIIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B586</accession>
    <name>V7B586_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">K Homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G079200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B586"/>
    <dbReference type="SMR" id="V7B586"/>
    <dbReference type="STRING" id="3885.V7B586"/>
    <dbReference type="Gramene" id="ESW12033">
        <property type="protein sequence ID" value="ESW12033"/>
        <property type="gene ID" value="PHAVU_008G079200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1588">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PMASTNI"/>
    <dbReference type="OrthoDB" id="6777263at2759"/>
    <dbReference type="PhylomeDB" id="V7B586"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048024">
        <property type="term" value="P:regulation of mRNA splicing, via spliceosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.10">
        <property type="entry name" value="K Homology domain, type 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045071">
        <property type="entry name" value="BBP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055256">
        <property type="entry name" value="KH_1_KHDC4/BBP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036612">
        <property type="entry name" value="KH_dom_type_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032377">
        <property type="entry name" value="STAR_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11208:SF153">
        <property type="entry name" value="K HOMOLOGY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11208">
        <property type="entry name" value="RNA-BINDING PROTEIN RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22675">
        <property type="entry name" value="KH-I_KHDC4-BBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16544">
        <property type="entry name" value="STAR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54791">
        <property type="entry name" value="Eukaryotic type KH-domain (KH-domain type I)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50084">
        <property type="entry name" value="KH_TYPE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="K Homology" evidence="4">
        <location>
            <begin position="131"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="255"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="260"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW12033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="281" mass="31274" checksum="D4C73EEC46897BC2" modified="2014-02-19" version="1">MSGLYNPNFSPARAASPQIRSNPDVDSQYLSELLAEHQKLGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVEIRLRQAQEIIEELLKPVEESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B616</accession>
    <name>V7B616_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Filament-like plant protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G161100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B616"/>
    <dbReference type="SMR" id="V7B616"/>
    <dbReference type="STRING" id="3885.V7B616"/>
    <dbReference type="Gramene" id="ESW13020">
        <property type="protein sequence ID" value="ESW13020"/>
        <property type="gene ID" value="PHAVU_008G161100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW13021">
        <property type="protein sequence ID" value="ESW13021"/>
        <property type="gene ID" value="PHAVU_008G161100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQJ4">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FKNEKAM"/>
    <dbReference type="OrthoDB" id="128924at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008587">
        <property type="entry name" value="FPP_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31580:SF5">
        <property type="entry name" value="FILAMENT-LIKE PLANT PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31580">
        <property type="entry name" value="FILAMENT-LIKE PLANT PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05911">
        <property type="entry name" value="FPP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57997">
        <property type="entry name" value="Tropomyosin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="72"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="803"/>
            <end position="862"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="189"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="441"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="539"/>
            <end position="713"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="20"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="30"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="46"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="81"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="94"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="836"/>
            <end position="848"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW13020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="878" mass="98896" checksum="070582A87B834C38" modified="2014-02-19" version="1">MMDKKRWLWKRKSSEKSPGETESSGSVSSHSERYSDEQEALKESPSRSNHSPDVTSKATVYAEEVDHSSFIYEQLPEEVTSKTVPGTGISSDGSSEKDENENIKDVKEDVLNDELRNMSEKLSAELVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEQEENIYDAVAQKTQELESVKIKLESKLTELQKKLDASEAKSSVDFDMYRKVECLEKENLALRHEILVQSEELEIRTIERDLSTQAAETASKQHLENIKKVAKLEAECRRLRSVASRSSLVKDHKSIVQSSFSVESLTDSQSDSAEPHTAVEIESHKMNGSEPNKSEPSCSDSWASALIAELDQFKNEKCRQTPTSSVKLDLMDDFLEMERLVALPETKKESLVQESVVTNQCINKESSLSREFEIMNQHMDELKVKLEKVEADKAELEIALMKSEEYIEESQLQLRDAGEKLEELQRELENAYNSKQRVEDHLLDIVAEAQTLSVKIEFLESEVDKERAVSSEIAMKFRDLEEELERKSAEVDSLEAEFDKKNDVSNKIAMKCKDLEKELESKSDKVDLLEAEIAKEREESDKIAKNLKDLKEVLDRKSAKVDMLEAEVAKERDVSDKIAKKCKDLEEVLGSKSAKVELLEAEVDKERTLSGKISMNCKELEEKLERKSAKVDLLEEEVHKERTTSKEIAMKCRELEEELLRSTASSYGEKKIKQEDLTLAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLTAQAQAQAGGEMWKFHSNGTFSPKRDSSSSRLADGNSCPSLNKNEETSPFSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7U8</accession>
    <name>V7B7U8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G154000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7U8"/>
    <dbReference type="SMR" id="V7B7U8"/>
    <dbReference type="Gramene" id="ESW12933">
        <property type="protein sequence ID" value="ESW12933"/>
        <property type="gene ID" value="PHAVU_008G154000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0610">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MCAGTHY"/>
    <dbReference type="OrthoDB" id="432483at2759"/>
    <dbReference type="PhylomeDB" id="V7B7U8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05574">
        <property type="entry name" value="STKc_phototropin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000020">
        <property type="entry name" value="serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000028">
        <property type="entry name" value="serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000032">
        <property type="entry name" value="Serine/threonine-protein kinase D6PK-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45637">
        <property type="entry name" value="FLIPPASE KINASE 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="259"/>
            <end position="596"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="44"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW12933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="640" mass="71066" checksum="84D0D94188A146A9" modified="2014-02-19" version="1">MGSPVNGLDSLSEVQNSVSVVDHDPPSTSGIPRPSRPPLSTSRNYGASSSQHNNNYGMKSIHHQKHSYQEADNVVRDEMPNMEKQHYDTNGKSEYVSLNKAVESCLGKNISKMETKLSMKQPLDGSKNCDSSGDNCKLVSTKGVVDRTKSKCESEIGFCPSPQSSFYSEAKESFANNGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRVRDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPSCIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKSKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEIPRQAMKALAAEKVPGVKPSGNYLDIDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7B926</accession>
    <name>V7B926_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">RNA-binding protein AU-1/Ribonuclease E/G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G190000g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="14" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in intercistronic processing of primary transcripts from chloroplast operons. The endonucleolytic activity of the enzyme depends on the number of phosphates at the 5' end, is inhibited by structured RNA, and preferentially cleaves A/U-rich sequences.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RNase E/G family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B926"/>
    <dbReference type="STRING" id="3885.V7B926"/>
    <dbReference type="Gramene" id="ESW13363">
        <property type="protein sequence ID" value="ESW13363"/>
        <property type="gene ID" value="PHAVU_008G190000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW13364">
        <property type="protein sequence ID" value="ESW13364"/>
        <property type="gene ID" value="PHAVU_008G190000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPXM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRDSWMR"/>
    <dbReference type="OrthoDB" id="6123450at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:RNA nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019307">
        <property type="entry name" value="RNA-bd_AU-1/RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004659">
        <property type="entry name" value="RNase_E/G"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00757">
        <property type="entry name" value="RNaseEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001">
        <property type="entry name" value="RIBONUCLEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001:SF1">
        <property type="entry name" value="RIBONUCLEASE E_G-LIKE PROTEIN, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10150">
        <property type="entry name" value="RNase_E_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007732352" description="RNA-binding protein AU-1/Ribonuclease E/G domain-containing protein" evidence="11">
        <location>
            <begin position="18"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="domain" description="RNA-binding protein AU-1/Ribonuclease E/G" evidence="12">
        <location>
            <begin position="300"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="704"/>
            <end position="730"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF10150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW13363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="730" mass="81844" checksum="30286A7B9FEE8653" modified="2014-02-19" version="1">MTRISSLLIFFLRITSLLRNPGYIHYFPLSLRKIESNKSETGDTVEEKVKLVDREQLLLEESSNIMSKESISTTILINSSICTMQRIAVLEDEKLVELLLQPVKSNVQCDSVYVGVVTKLVPHMGGAFVDIGNSRFAFMDIKQNKKPFIFPPFRQRTKKQEDLERKNDHTSREGEDGYLKSVHNDCDEHDGEDDFYISEVLKGNVNGSMVDDEVEADFEDDIEGSDVQVEGETNNCALALGMNGSVSSPVLQTKDTKRASQVASRENKWIQVRKGTKIIVQVVKEDLGTKGPTLTAYPKLRSRFWVLLACCDKVGVSKKISGVERTRLKVIAKTLQPEGFGLTVRTVAACQSFEELQKDLEGLLSTWKNIMEHAKSAALAADEGVDGAVPILLHRAMGQTLSVVQDYFNENVKKMVVDSPRTFHEVTSYLQEIAPDLCDRVELYDKKVPLFDEFNIEGEIGNILSKRVPLANGGSLIIEQTEALVSIDVNGGHGMLGHGNSQQQAILDVNLAAAKQIARELRLRDIGGIIVVDFIDMSDEANKRLVYEEVKKAIERDKSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCACCHATGRVEALETSFSKIEQQICRLLATMDHKPDPEKPKSWPKFILRVDHRMCEYLTSGKKTRLATLSSYLKVWILLKVARGLTRGSFEVKPFTDDKVEKNQHQVAISMLRSSEARTKKPGQNVTLVQVKKSKKARGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7B927</accession>
    <name>V7B927_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Leucine-rich repeat-containing N-terminal plant-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_008G276100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RLP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B927"/>
    <dbReference type="SMR" id="V7B927"/>
    <dbReference type="STRING" id="3885.V7B927"/>
    <dbReference type="Gramene" id="ESW14382">
        <property type="protein sequence ID" value="ESW14382"/>
        <property type="gene ID" value="PHAVU_008G276100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NINESCK"/>
    <dbReference type="OrthoDB" id="442066at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000111">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025875">
        <property type="entry name" value="Leu-rich_rpt_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27004:SF428">
        <property type="entry name" value="OS01G0160600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27004">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN 12 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12799">
        <property type="entry name" value="LRR_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0675">Receptor</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="12" id="KW-0732">Signal</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="12">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754033" description="Leucine-rich repeat-containing N-terminal plant-type domain-containing protein" evidence="12">
        <location>
            <begin position="22"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="394"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW14382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="15">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="433" mass="48775" checksum="9CC8BA05104F7C12" modified="2014-02-19" version="1">MGMWWLFPVCCNFLLFHFSFSHSFCHPHDNLALLHFKASLTINNAMYTYYYYDDYYYCHQVYPTIATWENGTGCCSCKLTGTIPQCLASSSSLYILNLETNRLNGTLPNTFSKNSVMTSLNLNDNRLEGLLPESLSNCMQLWLLNLGNNQIEDTFPHWLRTIPYLKVLVLRTNKLHGPIALFKTKHGFPSLNIFDISSNNFSGPIPEDFIQSFESMKNIVQDEVLGNPQQYLQWEFNSAVYYSPTTVTTKGTSTSFRKIPANFVIIDLSGNKFEGEIPNAIGELQALNGLNLSHNRLSGPIPQSMGNLIKLESLDLSSNMLTGRIPTELVNMKFLEVLNLSYNNLVGEIPQGKQFGSFMNDSYEGNLGLCGVPLSVKCGEEHDQHSSQREEKFVFGWEAVAIGYGCGMAFGVVMGSFVFRIRKPEFLVRMFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9X8</accession>
    <name>V7B9X8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">non-specific protein-tyrosine kinase</fullName>
            <ecNumber evidence="1">2.7.10.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_007G004200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="8">Interacts with OXI1.</text>
    </comment>
    <dbReference type="EC" id="2.7.10.2" evidence="1"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW14630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9X8"/>
    <dbReference type="SMR" id="V7B9X8"/>
    <dbReference type="STRING" id="3885.V7B9X8"/>
    <dbReference type="Gramene" id="ESW14629">
        <property type="protein sequence ID" value="ESW14629"/>
        <property type="gene ID" value="PHAVU_007G004200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW14630">
        <property type="protein sequence ID" value="ESW14630"/>
        <property type="gene ID" value="PHAVU_007G004200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CARDSAY"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004715">
        <property type="term" value="F:non-membrane spanning protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019901">
        <property type="term" value="F:protein kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000103">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000182">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052101">
        <property type="entry name" value="Plant_StressResp_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020635">
        <property type="entry name" value="Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47983:SF7">
        <property type="entry name" value="PROTEIN KINASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47983">
        <property type="entry name" value="PTO-INTERACTING PROTEIN 1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000654">
        <property type="entry name" value="Integrin-linked_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00219">
        <property type="entry name" value="TyrKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0829">Tyrosine-protein kinase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="71"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="15"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00065725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW14629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="364" mass="40295" checksum="534C6BA84C75087E" modified="2014-02-19" version="1">MRRWLCCTCQVEESYPSNENEHLKSPRNYGDSNQKGSKVLPPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEEYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAPAPES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBT6</accession>
    <name>V7BBT6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hydroxyproline-rich glycoprotein family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G063100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBT6"/>
    <dbReference type="Gramene" id="ESW15322">
        <property type="protein sequence ID" value="ESW15322"/>
        <property type="gene ID" value="PHAVU_007G063100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ6K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLWEERP"/>
    <dbReference type="OrthoDB" id="1938864at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007789">
        <property type="entry name" value="DUF688"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37767">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37767:SF1">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05097">
        <property type="entry name" value="DUF688"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="157"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW15322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="300" mass="33083" checksum="D9F5A7646642D109" modified="2014-02-19" version="1">MNATAKKKHVREPPAVPFIWEVKPGIPKKDWKAEAEVSSLGHFPQTPLKLIASVPFVWEEKPGKPLPNFSDVSVDPVLPKPEKTLIHIASSSGFSVACNFGHDDKDKGSCSYDSESITSLDLEAFTFDADESFGLVPSLLANCLVPSAKVSSAIPLAETPSSPASSETDSSISSYATGRSSPIGATFLESLFPLYAPQSGFLERDENLQKETSSTHEVGAKDFDHVDIASDMIRRPPTLGELIMMSRRRSCRRKAVQMKKWDLPKKITRQQAFGCFSIVTNSKMIEGLLKRKYFPRHKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBV0</accession>
    <name>V7BBV0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G064500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="7">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBV0"/>
    <dbReference type="SMR" id="V7BBV0"/>
    <dbReference type="Gramene" id="ESW15337">
        <property type="protein sequence ID" value="ESW15337"/>
        <property type="gene ID" value="PHAVU_007G064500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCTDGNP"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000317">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000406">
        <property type="entry name" value="PTI1-like tyrosine-protein kinase At3g15890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052059">
        <property type="entry name" value="CR_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47973">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="9">
        <location>
            <begin position="46"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="324"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="349"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW15337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="359" mass="40700" checksum="9C1D7B11954EA93C" modified="2014-02-19" version="1">MKFKCFSCFLCDKEQSQIQNGKEKKKRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLNHLHGQLATDSLLDWPRRMSIAIGAAEGLVYLHHEANPHIIHRDIKASNVLLDSEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSSKKPIEKLPGGVKRDIVQWVTPHFQKGNITHIADSKLKGRFDLEQLKRVIMIAIRCTDNSPEKRPSMVEVVEWLKGGLGRRKKEIPNSTHTNGDGEIRRTQSKLKIPSDDDGLKIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC13</accession>
    <name>V7BC13_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G278500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC13"/>
    <dbReference type="SMR" id="V7BC13"/>
    <dbReference type="Gramene" id="ESW14408">
        <property type="protein sequence ID" value="ESW14408"/>
        <property type="gene ID" value="PHAVU_008G278500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4A8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KFRYHFL"/>
    <dbReference type="OrthoDB" id="649865at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34125">
        <property type="entry name" value="OS01G0762900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34125:SF2">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="98" mass="10911" checksum="FD42B08664DE7E49" modified="2014-02-19" version="1">MEIQEQVLKFRYHFLGALLLCLTLFSLILMAPRFITLLAYFCPLFLSTALVLALVFVFAKTSPLPSSDATSLHSAGQGLLNYVAGHHDLPFDTRHNSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BD36</accession>
    <name>V7BD36_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase-like plant mobile domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G276900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BD36"/>
    <dbReference type="STRING" id="3885.V7BD36"/>
    <dbReference type="Gramene" id="ESW14391">
        <property type="protein sequence ID" value="ESW14391"/>
        <property type="gene ID" value="PHAVU_008G276900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW7G">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HERWIVL"/>
    <dbReference type="OrthoDB" id="1939467at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010073">
        <property type="term" value="P:meristem maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019557">
        <property type="entry name" value="AminoTfrase-like_pln_mobile"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044824">
        <property type="entry name" value="MAIN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033">
        <property type="entry name" value="PROTEIN MAIN-LIKE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46033:SF8">
        <property type="entry name" value="PROTEIN MAINTENANCE OF MERISTEMS-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10536">
        <property type="entry name" value="PMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotransferase-like plant mobile" evidence="1">
        <location>
            <begin position="61"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="442" mass="50649" checksum="41B5AC2612681644" modified="2014-02-19" version="1" fragment="single">MAGHQRLPSDMSLLRLQDKHVTKTVWEGNERLLRPRRHAIWIMNHADLVHPRVKAMMDGVGFGHLLTFSNIDINHHLVMALVERWRTETHTFHLPHGETTVTLEDVSVLLGLPIDGEPVTGFTNGDWVSMCRHLLGIIPPGNVVIGNTIRLSWLNNNFHQLPDDASENVVAHYARAHILTLIGSLLMPDTSGSRVHLMYLLLLDDLNNVSSYSWGSAVLACLYRALDHGINFNQDNIGGCMLLLQCWAWERIKCISPSLPPLSAEDIASGLGYPLAKRWSRALSQRQHQPTSSVSLIRSMLDQLQSKQFIWCPYTEDDIAALIIGEVSCVCRAVVPLICFATVEFHQADRVMRQFGFRQTIPTDPLNLDQLHKEDMRGRTERYWPQYHERWIVLWNDRHNRLIQGVQFNGNGHLRDTTTYMQWYINHTIRYISLPQQTSDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7BDU0</accession>
    <name>V7BDU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF659 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G121800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BDU0"/>
    <dbReference type="STRING" id="3885.V7BDU0"/>
    <dbReference type="Gramene" id="ESW16004">
        <property type="protein sequence ID" value="ESW16004"/>
        <property type="gene ID" value="PHAVU_007G121800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUNQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1935289at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007021">
        <property type="entry name" value="DUF659"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166:SF122">
        <property type="entry name" value="OS09G0499600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32166">
        <property type="entry name" value="OSJNBA0013A04.12 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04937">
        <property type="entry name" value="DUF659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF659" evidence="1">
        <location>
            <begin position="172"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="505" mass="58590" checksum="533207D894584976" modified="2014-02-19" version="1">MTSNSSISLTVTPNNTPGNRSDIAWKHCISVAGDTRKLQSKYFQKVITGEIDQLKHHLVDMQMDVGACKDVIDEVKKEMWEIVEGMTEVGEKRKNTKESSNSPSHKNIYKKRIFSTQATINKMFNKGLREEACKAIVRFFCNNVIPFNVEKAKEFTTMFDLVSRYVLGFKPPSYHEIIVKYLKEEVTNTSLVLKAHRDEWKKTRGTIMTNGWTNNKRRTIINFLVNISEEIVFLKFIDASIISKTAEKVFEMMDNIVEEVGEDNIRKRLFGTPCVAHYVDLMLEDYEKKIPIHEMFTSNEWKSDRFAKTNDGKIVEDVVLDKDFLKNTITGLKGALPLIEVLQLVDPDQKPVMGFIYKAMDQAKVKIQKTFNVVKESYLPLWNIIDERQDKQLHRPLHVVHTKRRNKQSTMNDVIVFVMANLKLTKKKQTRKPTQINIDDYSSDEEWIVEDEHEHNETFDLDENLVPVVKEDETLHSHDLLVTDLNGEEDGNGVEYEFNLQDYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHN8</accession>
    <name>V7BHN8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">CASP-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_007G153000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimer and heterodimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cell membrane</location>
            <topology evidence="1 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the Casparian strip membrane proteins (CASP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHN8"/>
    <dbReference type="STRING" id="3885.V7BHN8"/>
    <dbReference type="Gramene" id="ESW16393">
        <property type="protein sequence ID" value="ESW16393"/>
        <property type="gene ID" value="PHAVU_007G153000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QZV7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MPRRTHH"/>
    <dbReference type="OrthoDB" id="753675at2759"/>
    <dbReference type="PhylomeDB" id="V7BHN8"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006459">
        <property type="entry name" value="CASP/CASPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006702">
        <property type="entry name" value="CASP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044173">
        <property type="entry name" value="CASPL"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01569">
        <property type="entry name" value="A_tha_TIGR01569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36488:SF11">
        <property type="entry name" value="CASP-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36488">
        <property type="entry name" value="CASP-LIKE PROTEIN 1U1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04535">
        <property type="entry name" value="CASP_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="78"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="116"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Casparian strip membrane protein" evidence="11">
        <location>
            <begin position="31"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW16393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="20454" checksum="658B91975F486402" modified="2014-02-19" version="1">MSTTIDIPESSKVAKGKAVVVAPLRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTTFQFFVITMALVGGYLVLSLPFSVVAIVRPHAVGPRLFLIILDTVFLTLATASAASAAAVVYLAHNGDQDTNWLAICNQFGDFCAQTSSAVVSSFVAVVVFVLLIVMSAFAIGKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJX8</accession>
    <name>V7BJX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Ribophorin-2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G191800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Component of the oligosaccharyltransferase (OST) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Endoplasmic reticulum membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the SWP1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJX8"/>
    <dbReference type="SMR" id="V7BJX8"/>
    <dbReference type="STRING" id="3885.V7BJX8"/>
    <dbReference type="Gramene" id="ESW16876">
        <property type="protein sequence ID" value="ESW16876"/>
        <property type="gene ID" value="PHAVU_007G191800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2447">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YERRRAH"/>
    <dbReference type="OrthoDB" id="432292at2759"/>
    <dbReference type="UniPathway" id="UPA00378"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008250">
        <property type="term" value="C:oligosaccharyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006487">
        <property type="term" value="P:protein N-linked glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055375">
        <property type="entry name" value="Ribophorin_II_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055374">
        <property type="entry name" value="Ribophorin_II_3rd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056790">
        <property type="entry name" value="Ribophorin_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055373">
        <property type="entry name" value="Ribophorin_II_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008814">
        <property type="entry name" value="Swp1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12640:SF0">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12640">
        <property type="entry name" value="RIBOPHORIN II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05817">
        <property type="entry name" value="Ribophorin_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23861">
        <property type="entry name" value="Ribophorin_II_2nd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23860">
        <property type="entry name" value="Ribophorin_II_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25147">
        <property type="entry name" value="Ribophorin_II_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0732">Signal</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019609995" description="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" evidence="10">
        <location>
            <begin position="24"/>
            <end position="686"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="589"/>
            <end position="613"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="625"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="657"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="domain" description="Ribophorin II N-terminal" evidence="11">
        <location>
            <begin position="24"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Ribophorin II second" evidence="13">
        <location>
            <begin position="307"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="domain" description="Ribophorin II third" evidence="12">
        <location>
            <begin position="422"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="domain" description="Ribophorin II C-terminal" evidence="14">
        <location>
            <begin position="578"/>
            <end position="677"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF23860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF23861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF25147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW16876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="686" mass="75098" checksum="7B963D43D0062622" modified="2014-02-19" version="1">MATQVTPVAAFLLLLLILPFSTSISHSHRSAAINLFATSPASLEDAYEALRVFEIIGFEEKKTHVSGDTCQKVLENLNSASPLKDLFYALKVNAILKCDVNREALKDIASRLKATVHDASTLLDIYYSIGGLVLIKDQDSNVDPYLAHVDGVFQSIKALSQSDGRWRYSSDNPESSTFAAGLAIEALAGVISLASSEIDQSKVNIVKKDIVKLFDFIEKYDDGTFYFDEKFVGGDEQRGSLAATSSVVRGFTAFAAVTSGEINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLETNRISIPLILSLPETVYSLTKKGQLKVKVNTVLGSAAPPLTVKLARAFRTGAKDSAIIDSKELWYDQESGFHVLDAFPKNVEVGTYVFVFEIVLHDSGSEKVYATGGQIHVPIYVTGFIKVSNAEITVVDSDLGRAQSQKKLDLAGNDAVSLSANHLQKLKFSFQLTTPNGHVFKPHQAFLKLRHETKIEHIFVVGNTGKKFEIILDFLGLVEKLFYLSGRYDIELTVGDAVMENSFLRLLGHLDLNLPEAPEKAARPPSPPVDPYSRYGPKEEITHIFRVHEKRPPQNLSLIFLGLILLPIIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAGVLLLYVLFWLKLDLFTTLKAFGLLGAILMFVGHRILSHLALTSAKLKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNH6</accession>
    <name>V7BNH6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SET domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G054800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNH6"/>
    <dbReference type="SMR" id="V7BNH6"/>
    <dbReference type="STRING" id="3885.V7BNH6"/>
    <dbReference type="Gramene" id="ESW18605">
        <property type="protein sequence ID" value="ESW18605"/>
        <property type="gene ID" value="PHAVU_006G054800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1082">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="308383at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042054">
        <property type="term" value="F:histone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051357">
        <property type="entry name" value="H3K9_HMTase_SUVAR3-9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45660:SF46">
        <property type="entry name" value="HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SET" evidence="1">
        <location>
            <begin position="44"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14295" checksum="61E8037F44925B6D" modified="2014-02-19" version="1">MAKIQDLLLGRNTTNRKVVLSKRRLFVLKIFQMVGRDVGKVFTYASKCGNVGTFTNHSCSSNLRVKDVMHDHNDKNLPHKMLFGVKDILAGRELIYKYNSLNGKLIKSRSSSCYWGTPQGNGQIYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BNS5</accession>
    <name>V7BNS5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein JASON</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G023700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BNS5"/>
    <dbReference type="STRING" id="3885.V7BNS5"/>
    <dbReference type="Gramene" id="ESW18231">
        <property type="protein sequence ID" value="ESW18231"/>
        <property type="gene ID" value="PHAVU_006G023700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUII">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WQAYKEQ"/>
    <dbReference type="OrthoDB" id="1932581at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007142">
        <property type="term" value="P:male meiosis II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039300">
        <property type="entry name" value="JASON"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33318">
        <property type="entry name" value="ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33318:SF7">
        <property type="entry name" value="PROTEIN JASON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="188"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="264"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="379"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="395"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW18231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="412" mass="45830" checksum="8772A2FAE74971A1" modified="2014-02-19" version="1">MGCFFACFRARDSATATTTTVPSSRSGKHKPDDVVVSRNRLSTLFLSEEREDSDVRDGVKDFDVRSQKGGTEAKFLKAGGTSARIPFEKVHHGSPPFNPSTPIKCCEEGGKRTDYFEQTPSSCISNAQSSQCASLDSTEGIRTRNHQSLDKNENTASVSPWPSITYTKRNKSVRFKCDADLSSCDLSDCGGRHMKKTDSPNNESAYKPSPYPTPMKLSEEMQTPGTVYPTTKEDFPNVRPRLRSQFVYPINNPDDNVSHEILEEDGHTQDSRKLSESVQHSEITASTSDKGSKNISCEDECKVEESLSSWLKPAAVILEERNRRMQIAYNHTLGCDGNGIPNSTNKYQEDQKVNWHATPFEERLEKALSEESVISQRKDACGKSIPFDENEESDTALSQLQSSTHPQSVVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQP2</accession>
    <name>V7BQP2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">IBH1-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G118900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQP2"/>
    <dbReference type="SMR" id="V7BQP2"/>
    <dbReference type="STRING" id="3885.V7BQP2"/>
    <dbReference type="Gramene" id="ESW19370">
        <property type="protein sequence ID" value="ESW19370"/>
        <property type="gene ID" value="PHAVU_006G118900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY2C">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GDSHPRW"/>
    <dbReference type="OrthoDB" id="1647165at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11444">
        <property type="entry name" value="bHLH_AtIBH1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044549">
        <property type="entry name" value="bHLH_AtIBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044660">
        <property type="entry name" value="IBH1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059002">
        <property type="entry name" value="IBH1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124:SF12">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33124">
        <property type="entry name" value="TRANSCRIPTION FACTOR IBH1-LIKE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26576">
        <property type="entry name" value="IBH1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="IBH1-like N-terminal" evidence="6">
        <location>
            <begin position="46"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="17"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF26576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="208" mass="23059" checksum="15FABD1FDBF072B6" modified="2014-02-19" version="1">MFSSLMANPTDRSRDSHRVKKKKKSPAKPHPHQDHSHARWKTHAQQNLYSSKLHQALARVNISADAPRRGRAVHEAADRVLAAAARGRTRWSRAILTNRLKLKFRKTPHKRHKVVGPPRPKKPRFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLAQLLLGSSSSSSSSSSAAAVSSSAPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS05</accession>
    <name>V7BS05_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Terpene cyclase/mutase family member</fullName>
            <ecNumber evidence="4">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_006G156700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the terpene cyclase/mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="4"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS05"/>
    <dbReference type="SMR" id="V7BS05"/>
    <dbReference type="STRING" id="3885.V7BS05"/>
    <dbReference type="Gramene" id="ESW19803">
        <property type="protein sequence ID" value="ESW19803"/>
        <property type="gene ID" value="PHAVU_006G156700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0497">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WPQEEAT"/>
    <dbReference type="OrthoDB" id="21502at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005811">
        <property type="term" value="C:lipid droplet"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042300">
        <property type="term" value="F:beta-amyrin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042299">
        <property type="term" value="F:lupeol synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019745">
        <property type="term" value="P:pentacyclic triterpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02892">
        <property type="entry name" value="SQCY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.20:FF:000044">
        <property type="entry name" value="Lupeol synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.20:FF:000011">
        <property type="entry name" value="Terpene cyclase/mutase family member"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032696">
        <property type="entry name" value="SQ_cyclase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032697">
        <property type="entry name" value="SQ_cyclase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018333">
        <property type="entry name" value="Squalene_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01787">
        <property type="entry name" value="squalene_cyclas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764:SF58">
        <property type="entry name" value="BETA-AMYRIN SYNTHASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764">
        <property type="entry name" value="TERPENE CYCLASE/MUTASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13243">
        <property type="entry name" value="SQHop_cyclase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13249">
        <property type="entry name" value="SQHop_cyclase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01016">
        <property type="entry name" value="Prenyltransferase_Like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Squalene cyclase N-terminal" evidence="6">
        <location>
            <begin position="98"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="domain" description="Squalene cyclase C-terminal" evidence="5">
        <location>
            <begin position="351"/>
            <end position="689"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW19803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="698" mass="79506" checksum="067260F688385C69" modified="2014-02-19" version="1">MWRLKVGDGGKDPYIFSINNFVGRQIWEFDSEAGTDEERAQVEAARQDFYQNRFKLKACGDRLWRFQILRENKFKQKIDSVKIEDGEEMGLEKTTVTIKRATHYLSALQTSDGHWPAHIAGCLFHVPPLVISLYIIGHLDSVLSEEHRKEILRYIYYHQNEDGGWGLHIESHSCMFSTTLNYICMRILGEGPNGGLNNACAKGRKWIHEHGSVTHIPQWGKFWLSVLGIVDWCGSNPLPPEFWMLPNYFPMHPGKMWCFCRLVYMPMSYIYGKKFTGPITPLILDLREELFSEPYNKNSWKKARHECAKSLCMLACWVENSNGETIKKHLARIPDYLWLSEDGITVQASGSQTWDAGFIVQALLATNLIEEYGSTLTKAHDFIKKSQVQNNPSGDFKRMYRHNSKGSWPFTHQDHGLQVSDCTAECLMCCLLLSTMSQEIVGQKIEPQNLYDAVDFLLSLQSKNGGLTAWEPSQSETWLELLNPTEMFSDIIIEHEYVECTGAAIQALVTFKKEYPNYKEKDVDNFIAKAVEYLENEQSSNGSWYGKWGICYIYSSCFALRGLNAAGKTYTNSAVIRKTIKFLLSIQNEDGGWGESYLSCPKKIYVPLEGNRSNVAQTAWALMALIHGGQAHRDAIPLHRAAKLLINSQLESGDWPQEEATGAFLNNGVLHYPLYRNAFPLWALAQYRNEVLLPSTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS92</accession>
    <name>V7BS92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">FAD-binding PCMH-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G125400g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS92"/>
    <dbReference type="SMR" id="V7BS92"/>
    <dbReference type="STRING" id="3885.V7BS92"/>
    <dbReference type="Gramene" id="ESW19441">
        <property type="protein sequence ID" value="ESW19441"/>
        <property type="gene ID" value="PHAVU_006G125400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VLWWDDD"/>
    <dbReference type="OrthoDB" id="407275at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901696">
        <property type="term" value="P:cannabinoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.43.10:FF:000004">
        <property type="entry name" value="Berberine bridge enzyme-like 15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.462.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="entry name" value="Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32448">
        <property type="entry name" value="OS08G0158400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="FAD-binding/transporter-associated domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754933" description="FAD-binding PCMH-type domain-containing protein" evidence="8">
        <location>
            <begin position="24"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="9">
        <location>
            <begin position="78"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW19441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="542" mass="59528" checksum="5B1EF7AA37260BCF" modified="2014-02-19" version="1">MGKTCLVCVCAVFFLLTLSSSLAAPSSSSSLYDSFLRCLTQQTKSSTPLSNIVFAQINPSFPTVLQNYIRNARYNTSQTQKPLLIVTPLQEFHVQGAVICAKAANVQIKIRSGGHDFEGLSYVSVEPFIVVDMFNLRAITVDTTNQVAVVQAGATLGELYYRIWEKSKVLGFPAGVCPTVGIGGHISGGGYGNMLRKYGLSVDNVIDAQIVDVKGNLLNRKSMGEDLFWAIRGGGGGSFGVIVSFTIKLVPVPAAVTIFRVEKTLETNVTATDLVVQWQQVAPTTDERLFMRLLLQPVSSDVVKGGRTVRATVVALFLGGADEVVSILGKEFPLLGLKKEDCSEVSWIDSVLWWDDDESLKNGGKPETLLNRNVNSASFLKRKSDYVQNAISKQGLTLIFKKMIEVGKIGLVFNPYGGKMGEIPSDATPFPHRKGNLFKMQYSVTWKDPSPGATLNFLNEAKMLYSYMTPFVSKNPRSAYLNYRDLDIGVNDFGKNSFAEGQVYGSKYFNGNFDRLVNVKTKVDPQNFFRNEQSIPVRPSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUB0</accession>
    <name>V7BUB0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_005G001900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Component of the oligosaccharyltransferase (OST) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass type III membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OST4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUB0"/>
    <dbReference type="SMR" id="V7BUB0"/>
    <dbReference type="STRING" id="3885.V7BUB0"/>
    <dbReference type="Gramene" id="ESW20618">
        <property type="protein sequence ID" value="ESW20618"/>
        <property type="gene ID" value="PHAVU_005G001900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDK8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="2124077at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018943">
        <property type="entry name" value="Oligosaccaryltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044165">
        <property type="entry name" value="OST4_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036330">
        <property type="entry name" value="Ost4p_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28677">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 4A-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28677:SF4">
        <property type="entry name" value="DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 4B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10215">
        <property type="entry name" value="Ost4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103464">
        <property type="entry name" value="Oligosaccharyltransferase subunit ost4p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW20618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="37" mass="4242" checksum="C8827D404FA9F502" modified="2014-02-19" version="1">MIDDQDLGFFANFLGVFIFVLVIAYHFVMADPKFEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUI6</accession>
    <name>V7BUI6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_005G0089000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUI6"/>
    <dbReference type="STRING" id="3885.V7BUI6"/>
    <dbReference type="Gramene" id="ESW20715">
        <property type="protein sequence ID" value="ESW20715"/>
        <property type="gene ID" value="PHAVU_005G0089000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ92">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAERTDH"/>
    <dbReference type="OrthoDB" id="10064100at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16655">
        <property type="entry name" value="RING-Ubox_WDSUB1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051348">
        <property type="entry name" value="U-box_ubiquitin_ligases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647">
        <property type="entry name" value="OS02G0152300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45647:SF15">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="386"/>
            <end position="647"/>
        </location>
    </feature>
    <feature type="domain" description="U-box" evidence="14">
        <location>
            <begin position="669"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="180"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="180"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW20715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="740" mass="82540" checksum="9C1749F6731B2076" modified="2014-02-19" version="1" fragment="single">GNVIPLSQVRNDVATAFRKEVEWEKNQMMLPFKRLCEQRKVHVDVVVIESDDVAIAVAEEVAKGAITKLVVGASSSGIFKSKQKGMSMKISVSTPRFCTVYAISKGKLSIRQSDMPIDVSIMDDASETSFSSSSSSNYTSTSQTESTSVSSYAGLHSSSLATQRFQALSSINSVLLSTNPSLSDTSHSRGQSLDLGRENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSIKDVALATTFPSPNMQAKFNLELEKLRIELRHAQGLHAVAQSEKTEACRKLNDLSKRRSEETMKMKEIVAKEEKAEELAKLESEKYQDASREAVYLKECAEREAAERKETELRVIRATKEKEKLVDALSGTMLQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNGNRESKQFQQELEILSRIRHPNLLLLLGACHDHGCLVYEYMENGNLEDRLLRKNNTSPITWFDRFRIAWEIASALAFLHSSNPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMFKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVEIAIEGGNLTDILDPEAGAWPFKETLDLAVLGLSCAELRRRDRPDLKDQVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLQENDNSPMTNMALPHKHLIPNYTLLSAILEWKSRES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUW5</accession>
    <name>V7BUW5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G019500g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="protein sequence ID" value="ESW20845"/>
        <property type="gene ID" value="PHAVU_005G019500g"/>
    </dbReference>
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        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW20845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14486" checksum="1691E3869A61728E" modified="2014-02-19" version="1">MFLNRQLSMFRGPHARFLSTINTTASSNYYHKIKPKPLNTFKFSFSFSLHSSSHGISNILLQLLRRPPPRGAFLRRRLRSRSVAGARAGTRCRSCRIRFELGGRDWSVGCSFNACHLQTLMILDFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
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        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">PHAVU_005G117300g</name>
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    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="protein sequence ID" value="ESW21992"/>
        <property type="gene ID" value="PHAVU_005G117300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1Z8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="695262at2759"/>
    <dbReference type="PhylomeDB" id="V7BVF5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33264:SF25">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="84"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="17907" checksum="F34B9E2A96C60344" modified="2014-02-19" version="1">MMSHSFHSPPPLAMARQQKVLRRSPPVARRRERGRAGEVAGNATAACAAVCCCVPCSVMDVVVLAAYKVPAGLVRKAMHKRKRRLLQKKNKKTEALLDHGPADVSGPRPCAEEHLSKDVAEDKSEATTKLEEEMWAQFNGTGFWRSDSQRLEQSAECHCQAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVJ8</accession>
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        <recommendedName>
            <fullName evidence="4">Bromo domain-containing protein</fullName>
        </recommendedName>
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    <gene>
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    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
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            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="SMR" id="V7BVJ8"/>
    <dbReference type="STRING" id="3885.V7BVJ8"/>
    <dbReference type="Gramene" id="ESW21075">
        <property type="protein sequence ID" value="ESW21075"/>
        <property type="gene ID" value="PHAVU_005G039500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR9N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCEQKFH"/>
    <dbReference type="OrthoDB" id="1742084at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd04369">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.920.10">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001487">
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    </dbReference>
    <dbReference type="InterPro" id="IPR036427">
        <property type="entry name" value="Bromodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37888">
        <property type="entry name" value="DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37888:SF11">
        <property type="entry name" value="DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00439">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00297">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47370">
        <property type="entry name" value="Bromodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50014">
        <property type="entry name" value="BROMODOMAIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="359"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
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        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
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        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="139"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="448"/>
            <end position="730"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="139"/>
            <end position="154"/>
        </location>
    </feature>
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        <location>
            <begin position="161"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
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            <begin position="204"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="215"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="274"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="313"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="493"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="559"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="583"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="3">
        <location>
            <begin position="621"/>
            <end position="644"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="646"/>
            <end position="665"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW21075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="730" mass="79308" checksum="BCCC9FFE69E99657" modified="2014-02-19" version="1">MENHQNHKAEPEPDRDKNHHHSQAWGTWEELLLAFAVNRHGSKDWDTVAMEVQSRATRLLATARHCEQKFHDLSRRFADQCNDGVTPPQQNGAADGDNSDHVPWLDELRKLRVAELRRDVQRSDVSILSLQLEVKRLEEEKTKENDCKDDKKPDLAVSGEARAENDKTGGEVEEAGPANSEPERTANAGKMLPTTGDESDRENQSVNESNSTGSRFDKTGEGEAKLKVEPDPVQTGSKEPDPVARKGKPVGEESNNGSYDALAKVPTCESVPPSDERKVEQDDDSSELHDSVAHSGEGGTRESSEVQSSASLTRKRKTRRRKEVSGSDGRGGGTSTPPENDEVAMVKSEPLVGVLELIKGHEHSSFFERRLESQLESDRYKDIVKQPLDLETIQLRIQKGQYSSCTSAFFRDLLLLFTNATVIFPYDSPESQAARQLHRLVTTEMKNYGQAQSDPIPRKNDSLPPNVPLAKPDSLFSKNKASGPILVCRKRSSMSAKPSSTTFGQKGVDQPVFNDKKERPSSDSKPPMKPSSSDTDEEEPPKAKEKPVTGARSLRRSNKNLNNKKLSSNSTPKAGSSGNKPSETPKPEKSKAEGGPDKKRNAAADFLKRIKRNTSVEAVKGGSGGGGGGGGSSSSSKGGGGGVGVKEQKKIVNNGKGDKGKERASRHSGGGGSASGDKRNKNIENNSQSKRSVGRPPKKVVETNAGSSKRGRENSASAGKDKRPKKRSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVK3</accession>
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        <recommendedName>
            <fullName evidence="4">Acid phosphatase/vanadium-dependent haloperoxidase-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G117000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVK3"/>
    <dbReference type="STRING" id="3885.V7BVK3"/>
    <dbReference type="Gramene" id="ESW21989">
        <property type="protein sequence ID" value="ESW21989"/>
        <property type="gene ID" value="PHAVU_005G117000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYGQ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMETGGM"/>
    <dbReference type="OrthoDB" id="1716650at2759"/>
    <dbReference type="PhylomeDB" id="V7BVK3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd01610">
        <property type="entry name" value="PAP2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003832">
        <property type="entry name" value="DUF212"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31446">
        <property type="entry name" value="ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31446:SF40">
        <property type="entry name" value="ACID PHOSPHATASE_VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02681">
        <property type="entry name" value="DUF212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="170" mass="17970" checksum="39A70DB89EC836EA" modified="2014-02-19" version="1">MDEVMTMADVAANTQASTTSSASSSLPSNLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLLDSGGMPSSHSATVSALVVAIGLQEGAGSSAFAVAVVLACIVMYDASGVRLHAGRQAELLNQIVCELPPEHPLSNVRPLRDSLGHTPLQVVAGGILGCIIAFLIRKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWI6</accession>
    <name>V7BWI6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_005G068300g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWI6"/>
    <dbReference type="Gramene" id="ESW21408">
        <property type="protein sequence ID" value="ESW21408"/>
        <property type="gene ID" value="PHAVU_005G068300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRBZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IPLIIMQ"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="PhylomeDB" id="V7BWI6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015369">
        <property type="term" value="F:calcium:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006874">
        <property type="term" value="P:intracellular calcium ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000563">
        <property type="entry name" value="Sodium/calcium exchanger NCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004713">
        <property type="entry name" value="CaH_exchang"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31503:SF79">
        <property type="entry name" value="CALCIUM-BINDING EF-HAND PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31503">
        <property type="entry name" value="VACUOLAR CALCIUM ION TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0050">Antiport</keyword>
    <keyword evidence="5" id="KW-0106">Calcium</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755427" description="EF-hand domain-containing protein" evidence="10">
        <location>
            <begin position="26"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="207"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="236"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="545"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="578"/>
            <end position="596"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="617"/>
            <end position="641"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="647"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="673"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="11">
        <location>
            <begin position="337"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="11">
        <location>
            <begin position="435"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="11">
        <location>
            <begin position="474"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW21408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="702" mass="78647" checksum="789DA1125ACDA93D" modified="2014-02-19" version="1">MRTMSKVGCFTLFAFLVALHVECRCLRPSVSDGVDAVQSHEAYLQLIDQKIESSSDGHYCKQMYGFLPCSSNILGHLFLILVYEYLLFHGESYLATGGEQIFKILGPGVFGASAFDILGALPESLILLVTGISSDKESAQEYASTGVGLLAGSSIFLLTVVWGTCVIIGKQEIINDSNSDDLHSWSTGIKKSLTGYGITMDVDTREMAIIMVLSTIPLIIMQIPRFFHLSSAARNVTLMVALIVAVTFLISYFIYQVFKPQIEKTRLEYIKHHDLILRIFERVEKQTLQKILAEDGTPNVAAISGLYHEISQHGGNDLLASEVRELLFGNKMTDTNIKEEQIADLLKAFDRNGDQIITKEEFVTGLTEYINQTKHALDRQYLPKESLSNMYKTFIKPWIEHARKERELKKHLISEVLKHAQNDMVGRLQNDNGTPDKAAIKRLFEEIDVNKDNHISRSELEKVVKDIQFNKFVDAEEAVTKLAQDLDLNGDDEISKTEFIEGLTKWMNSDSSRAANSKSSSQGIHKTWEDVEKVMEENQTNGTSAWLTAIGYVVLGVTMLALLAEPLIASVQKFSEEAGISSFFISFILVPLATNFREATSAIKEAGHKKRSNTSQTIYEIYGAVFMNNILGFVVISILIYVREISWQFSADVLVVAIVCAVMGLTARFRPTFPLWTSFAAYFMYLIALLLVFVLKDVLNYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY54</accession>
    <name>V7BY54_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">mitogen-activated protein kinase kinase kinase</fullName>
            <ecNumber evidence="2">2.7.11.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_005G115900g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.25" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY54"/>
    <dbReference type="SMR" id="V7BY54"/>
    <dbReference type="STRING" id="3885.V7BY54"/>
    <dbReference type="Gramene" id="ESW21975">
        <property type="protein sequence ID" value="ESW21975"/>
        <property type="gene ID" value="PHAVU_005G115900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NESRGAC"/>
    <dbReference type="OrthoDB" id="275301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004709">
        <property type="term" value="F:MAP kinase kinase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019901">
        <property type="term" value="F:protein kinase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009738">
        <property type="term" value="P:abscisic acid-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006970">
        <property type="term" value="P:response to osmotic stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd06606">
        <property type="entry name" value="STKc_MAPKKK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000852">
        <property type="entry name" value="Mitogen-activated protein kinase kinase kinase 17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052751">
        <property type="entry name" value="Plant_MAPKKK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48011">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48011:SF8">
        <property type="entry name" value="MAP KINASE KINASE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0938">Abscisic acid signaling pathway</keyword>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 14" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="15">
        <location>
            <begin position="3"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00047559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00048329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW21975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="399" mass="44056" checksum="9B8FDF3F9A0350EE" modified="2014-02-19" version="1">MEWTRGFIIGRGSSATVYTATSAHSSTVSAVKTAELSPSNSEKLQREQRILSSLFSPHIVTYKGCNTTEESNTLWFNLYMEYMPFGTLSQEIHRQGGRLSAPTIVHYVRQVLQGLEYLHNKGVVHCDIKGSNILIGEDGAKIGDFGCAKLLNESPVAAIGGTPMFMAPEVARGEEQGYPADIWALGCTVVEMATGFAPWPNLEDPVTVLYRVAYSNEVPEIPSFLSEEAKDFLGKCFRRNPKERWSCSELLKHPFLGEFSSNDKEIQQSNSCSPTSILEQGFWNSVEEAESEAGCASEPGNVVQIRSSDESPKGRIRRLALCSEDPIWELGDENWITTRGSEAAGASTCEGLDFDVNIRISDYFCDDYYKCSDVSVVVDSFNFEGGIGEMVLPSTFEFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYL7</accession>
    <name>V7BYL7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SHSP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G090600g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYL7"/>
    <dbReference type="SMR" id="V7BYL7"/>
    <dbReference type="STRING" id="3885.V7BYL7"/>
    <dbReference type="Gramene" id="ESW21681">
        <property type="protein sequence ID" value="ESW21681"/>
        <property type="gene ID" value="PHAVU_005G090600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXVI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HNDIYLE"/>
    <dbReference type="OrthoDB" id="1431247at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47838">
        <property type="entry name" value="21.7 KDA CLASS VI HEAT SHOCK PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47838:SF1">
        <property type="entry name" value="21.7 KDA CLASS VI HEAT SHOCK PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="HSP20-like chaperones"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SHSP" evidence="3">
        <location>
            <begin position="78"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="192" mass="22094" checksum="0D86D96BA7F29E0D" modified="2014-02-19" version="1">MTSSNKRLEVQTEDQTPHKWCVSLGEEPFKRFFGQTNPSVHKVFGEGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLRSSSQSTVDWCQTGEGYILKAEIPGTGKSNIQVIVDKGKVVEISGPWKQQRDSKAHDWRCGHWWEHGYVRRLEMPEDADWNNIEAYIHNDIYLEIRIPKSQQGRDLPQGKDVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7C140</accession>
    <name>V7C140_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G011700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C140"/>
    <dbReference type="SMR" id="V7C140"/>
    <dbReference type="STRING" id="3885.V7C140"/>
    <dbReference type="Gramene" id="ESW23010">
        <property type="protein sequence ID" value="ESW23010"/>
        <property type="gene ID" value="PHAVU_004G011700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVZV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCMQRNQ"/>
    <dbReference type="OrthoDB" id="641149at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.120.10">
        <property type="entry name" value="DNA Methylase, subunit A, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050390">
        <property type="entry name" value="C5-Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030380">
        <property type="entry name" value="SAM_MeTfrase_DRM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015940">
        <property type="entry name" value="UBA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23068:SF25">
        <property type="entry name" value="DNA (CYTOSINE-5)-METHYLTRANSFERASE DRM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23068">
        <property type="entry name" value="DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51679">
        <property type="entry name" value="SAM_MT_C5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51680">
        <property type="entry name" value="SAM_MT_DRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50030">
        <property type="entry name" value="UBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 9" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UBA" evidence="11">
        <location>
            <begin position="141"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="SAM-dependent MTase DRM-type" evidence="12">
        <location>
            <begin position="258"/>
            <end position="587"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="99"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="123"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW23010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="588" mass="66339" checksum="3090F4A47D1538AC" modified="2014-02-19" version="1">MGGDDSPVESDNCDWNTEDELEIENYQSSSSCLTVPNGDAVTGSGEASSSAVSANSKVFNHFIGMGFSGEMVSKVIQEYGEENEDKLLEELLSYKALESSPRSQQHIERDPCSSENAGSSWDDLSDTDNFSDNEEIAKGTSENDDTLRTLVKMGYKLEEALIAIERLGRNSPLEELVDFIDVAQLAKAEDALLPPEEKLQYNDYTKSKKRSFYNCEVLGRKKPRGCEKKILNEDEEEALHLPNPMIGFGVPTESMFITHRRIPEDAIGPPYFYYENVALAPKGVWQTISRFLYDVEPEFVDSKFFCAAARKRGYIHNLPIQNRFPLLPLPPRTVHEAFPLTRKWWPSWDPRTKLNCLQTCIGSAKLTERIRKAVENYTGDPPEHVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINLLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGHLFDMDDVRELDGDRLEQLMSTFGGFDLVVGGSPCNNLAGSNRVSRDGLEGKESSLFFDYFRILDLVKNLTAKHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2I3</accession>
    <name>V7C2I3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF4219 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G059100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2I3"/>
    <dbReference type="STRING" id="3885.V7C2I3"/>
    <dbReference type="Gramene" id="ESW23578">
        <property type="protein sequence ID" value="ESW23578"/>
        <property type="gene ID" value="PHAVU_004G059100g"/>
    </dbReference>
    <dbReference type="OMA" id="DIWETIT"/>
    <dbReference type="OrthoDB" id="1431294at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34676:SF27">
        <property type="entry name" value="ASPARTYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34676">
        <property type="entry name" value="DUF4219 DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14223">
        <property type="entry name" value="Retrotran_gag_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="204"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="208"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="226" mass="26481" checksum="7A04E5F3DA337BA9" modified="2014-02-19" version="1">MKQNHLFKRAPLFKGEKYDLWMLKMTSFLEYNVDLLIFVKKSKPRHILLCSLSKEETSKVHAMANTKDIWETITLSYEGSKEVKQNMLTLLKTQHEMFRIEENESIQLMVIRLQTIINNFRSSGTVITMFLEELVDILIIHDKVLQGDDKTTKGKSLTLKAFNKAKKTKSLKVFEENEDTSDDSESNYEDSAFITQKFKKMCKRKRNSTKDKKYTRETKGKHTCFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2V5</accession>
    <name>V7C2V5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G026800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2V5"/>
    <dbReference type="STRING" id="3885.V7C2V5"/>
    <dbReference type="Gramene" id="ESW23201">
        <property type="protein sequence ID" value="ESW23201"/>
        <property type="gene ID" value="PHAVU_004G026800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0136">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1721938at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="8"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="116" mass="12434" checksum="56341000250EAC3C" modified="2014-02-19" version="1">MATHPGARTTETTTHLQQRQRQRTCRNDDGNGNAPCSNGNGNAPCSNSDGNTLCNGNGLCNGDDNTSEGGQPLQPYHSEDWLKPNVVLEAFEARAARICVACAQNLSKFSNPEESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7C335</accession>
    <name>V7C335_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Elongation factor 1-alpha</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G075100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C335"/>
    <dbReference type="SMR" id="V7C335"/>
    <dbReference type="STRING" id="3885.V7C335"/>
    <dbReference type="Gramene" id="ESW23783">
        <property type="protein sequence ID" value="ESW23783"/>
        <property type="gene ID" value="PHAVU_004G075100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0052">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AIRDMGM"/>
    <dbReference type="OrthoDB" id="1478948at2759"/>
    <dbReference type="PhylomeDB" id="V7C335"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01883">
        <property type="entry name" value="EF1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03693">
        <property type="entry name" value="EF1_alpha_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03705">
        <property type="entry name" value="EF1_alpha_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000003">
        <property type="entry name" value="Elongation factor 1-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000005">
        <property type="entry name" value="Elongation factor 1-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000255">
        <property type="entry name" value="Elongation factor 1-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00118_A">
        <property type="entry name" value="EF_Tu_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054696">
        <property type="entry name" value="GTP-eEF1A_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050100">
        <property type="entry name" value="TRAFAC_GTPase_members"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004539">
        <property type="entry name" value="Transl_elong_EF1A_euk/arc"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00483">
        <property type="entry name" value="EF-1_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF008969">
        <property type="entry name" value="PRK12317.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23115">
        <property type="entry name" value="TRANSLATION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22594">
        <property type="entry name" value="GTP-eEF1A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="9 10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0488">Methylation</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="11">
        <location>
            <begin position="5"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW23783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="447" mass="49331" checksum="CBAA0AB9D558B942" modified="2014-02-19" version="1">MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPSGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3N7</accession>
    <name>V7C3N7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_004G054300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3N7"/>
    <dbReference type="SMR" id="V7C3N7"/>
    <dbReference type="Gramene" id="ESW23521">
        <property type="protein sequence ID" value="ESW23521"/>
        <property type="gene ID" value="PHAVU_004G054300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RY1P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RADRSQW"/>
    <dbReference type="OrthoDB" id="2013327at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035979">
        <property type="entry name" value="RBD_domain_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48167">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48167:SF2">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54928">
        <property type="entry name" value="RNA-binding domain, RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW23521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="219" mass="24696" checksum="02BCAEA66207DFFB" modified="2014-02-19" version="1">MTSIVRAALRSKCSSSVCALVPVRCFSTEAAQPPLNSTTPPPFFDVDHSGVTYGKLFGIRKHVLKTDIINFFEDCNLTLEDVKLDYNRSFFPVSTLLQFPTRKSYDNAIRVVVRKGRLYRLDRADRSQWDIVKPYDGKTILIQGMHRTASHEDVARILSGCEFDSSAINVFLRSGDWGAAEPIKLATVRFHSRTQAMNAYIAKNGTFCQNNRLSIQVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3P2</accession>
    <name>V7C3P2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Phytocyanin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_004G054700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3P2"/>
    <dbReference type="SMR" id="V7C3P2"/>
    <dbReference type="STRING" id="3885.V7C3P2"/>
    <dbReference type="Gramene" id="ESW23526">
        <property type="protein sequence ID" value="ESW23526"/>
        <property type="gene ID" value="PHAVU_004G054700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZRN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISFMANA"/>
    <dbReference type="OrthoDB" id="2331100at2759"/>
    <dbReference type="PhylomeDB" id="V7C3P2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04216">
        <property type="entry name" value="Phytocyanin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000003">
        <property type="entry name" value="Blue copper"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039391">
        <property type="entry name" value="Phytocyanin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003245">
        <property type="entry name" value="Phytocyanin_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021">
        <property type="entry name" value="BLUE COPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33021:SF483">
        <property type="entry name" value="PLASTOCYANIN-LIKE DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02298">
        <property type="entry name" value="Cu_bind_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51485">
        <property type="entry name" value="PHYTOCYANIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0186">Copper</keyword>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755333" description="Phytocyanin domain-containing protein" evidence="7">
        <location>
            <begin position="23"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="Phytocyanin" evidence="8">
        <location>
            <begin position="23"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="122"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="126"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW23526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="186" mass="19582" checksum="E0D4439F02EAB2B5" modified="2014-02-19" version="1">MGHKNRVFLALIAAMIAKEVFAAQHVVGGSQGWDQSTDFNSWTSGQTFKVGDKLVFKYSSLHSVVELGKESAYKNCDISSPIQSLSNGNDVVKLDKPGTRYFTCGTLGHCSQGMKMKITIVKGNAPSPASSPSSLTSPSPSSSSSSLSSPSSSSATTDTDTSSGSHCFTSFMFIVALSLTVMVSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7C439</accession>
    <name>V7C439_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Leucine-rich repeat-containing N-terminal plant-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G105600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RLP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C439"/>
    <dbReference type="SMR" id="V7C439"/>
    <dbReference type="STRING" id="3885.V7C439"/>
    <dbReference type="Gramene" id="ESW24133">
        <property type="protein sequence ID" value="ESW24133"/>
        <property type="gene ID" value="PHAVU_004G105600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHIERRI"/>
    <dbReference type="OrthoDB" id="1432377at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000041">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046956">
        <property type="entry name" value="RLP23-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48063">
        <property type="entry name" value="LRR RECEPTOR-LIKE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48063:SF98">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE FLS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW24133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="836" mass="94072" checksum="7CA67EE04297EB5F" modified="2014-02-19" version="1">MYHLSLEIFSSCRSFEGHGIKIDDGGQWMSNLISLTHLYFQSVSNLNRSHTWLQVIAKLPKLKELSLVHCSLSDHFILSSRPSIFNFSTSLSVLDLSFNTFTSPMVFQWVSNTTSSLVELDLSNNILEGSTSIHFGMFMNSLRHLDLSTNYFKARDLKSFMNICTLSSLNLYQNNLTEDLPSILDHLSSVFSSLKTLSLDINRLSGTIPEDVKLPSTLEGLSIILNFLDGGIPKLFGNACALRSLDMSHNSLNLSIFSTLQVLKLSENELNGKIPEGNKLPYKLEDLSIRSNRLEGGIAKLFGNACSLLSLDMFNNSFTNELPKVISHLSCARYSLEELNLGVNQINGILPDFSTFTFLKRLNLSKTKLNGEIPKDIQLPPQLEELYMDSNSLIGVLSDYHFANMSNLKKLHLSDNLLALTFIGNWVPPFQLPTIELRSCKLGPTFPKWLQSQNKFFNIDISNVAISDIVPEWFWAKLPRQKVMKMNISYNNLRGILPKFPPTYIPTSMSFGSNQFEGSIPLFLRNFGRLDLSKNKLSSSLSFSCENGTLQGLSHLDLSYNRLSEHIPDCWRQLNSLVYLDLSYNKFSRKIPTSMGSLLHLQALLLRNNSLVEGIPFSMRNCRKLVMVDMSGYKLSGSIPDCIGTERELQILILGRNQFFGSLPSRICCLRNIQLLDLLVNNLSGKIPKCIKNLTSMAQTTSSIYHGDHWYFFKNSIYATNMSYDLNALLTWKGSEQMFMNREIPLEIKKLSGLISLNLSRKNLTGEIPSNIGNLAVLDSLDLSRNQLVDLSHNHLTGKIPTATQLQGFNPSSYEDNFNLCGPPLKKMCAKGRSTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4I2</accession>
    <name>V7C4I2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Histidine kinase/HSP90-like ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_004G107700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the heat shock protein 90 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4I2"/>
    <dbReference type="SMR" id="V7C4I2"/>
    <dbReference type="STRING" id="3885.V7C4I2"/>
    <dbReference type="Gramene" id="ESW24165">
        <property type="protein sequence ID" value="ESW24165"/>
        <property type="gene ID" value="PHAVU_004G107700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0019">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRMKAEQ"/>
    <dbReference type="OrthoDB" id="28737at2759"/>
    <dbReference type="PhylomeDB" id="V7C4I2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16927">
        <property type="entry name" value="HATPase_Hsp90-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.565.10:FF:000012">
        <property type="entry name" value="Heat shock cognate protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.790:FF:000001">
        <property type="entry name" value="Heat shock protein 90 alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.230.80:FF:000001">
        <property type="entry name" value="Heat shock protein 90 alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11260:FF:000001">
        <property type="entry name" value="Heat shock protein 90 alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11260">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Heat shock protein 90, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="entry name" value="Histidine kinase-like ATPase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00505">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019805">
        <property type="entry name" value="Heat_shock_protein_90_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037196">
        <property type="entry name" value="HSP90_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001404">
        <property type="entry name" value="Hsp90_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020575">
        <property type="entry name" value="Hsp90_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003555">
        <property type="entry name" value="PRK05218.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11528">
        <property type="entry name" value="HEAT SHOCK PROTEIN 90 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13589">
        <property type="entry name" value="HATPase_c_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00183">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002583">
        <property type="entry name" value="Hsp90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00775">
        <property type="entry name" value="HEATSHOCK90"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110942">
        <property type="entry name" value="HSP90 C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00298">
        <property type="entry name" value="HSP90"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Histidine kinase/HSP90-like ATPase" evidence="10">
        <location>
            <begin position="27"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="215"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="671"/>
            <end position="700"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="671"/>
            <end position="691"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="100"/>
            <end position="101"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="120"/>
            <end position="125"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="371"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008239"/>
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    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
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    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
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    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR002583-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW24165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="700" mass="80582" checksum="599F24B3B94CD889" modified="2014-02-19" version="1">MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRLVPDQANKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDTDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDIEEVDEDKEKDSKKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEEIMPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDSFSKNLKLGIHEDSQNRSKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEELCKVIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDNSMGGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFASRIHRMLKLGLSIDEDENGGDDDVDMPPLEEDGTEESKMEEVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5A5</accession>
    <name>V7C5A5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Chloride channel protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_004G133400g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 14">Membrane</location>
            <topology evidence="1 14">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the chloride channel (TC 2.A.49) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5A5"/>
    <dbReference type="STRING" id="3885.V7C5A5"/>
    <dbReference type="Gramene" id="ESW24465">
        <property type="protein sequence ID" value="ESW24465"/>
        <property type="gene ID" value="PHAVU_004G133400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0474">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QDWRSAK"/>
    <dbReference type="OrthoDB" id="428525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034707">
        <property type="term" value="C:chloride channel complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009705">
        <property type="term" value="C:plant-type vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005247">
        <property type="term" value="F:voltage-gated chloride channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04591">
        <property type="entry name" value="CBS_pair_voltage-gated_CLC_euk_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.3080.10:FF:000004">
        <property type="entry name" value="Chloride channel ClC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3080.10">
        <property type="entry name" value="Clc chloride channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051280">
        <property type="entry name" value="Cl-channel/antiporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014743">
        <property type="entry name" value="Cl-channel_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002251">
        <property type="entry name" value="Cl_channel_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001807">
        <property type="entry name" value="ClC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11689">
        <property type="entry name" value="CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11689:SF165">
        <property type="entry name" value="CHLORIDE CHANNEL PROTEIN CLC-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00654">
        <property type="entry name" value="Voltage_CLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00762">
        <property type="entry name" value="CLCHANNEL"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01120">
        <property type="entry name" value="CLCHANNELPLT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81340">
        <property type="entry name" value="Clc chloride channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13" id="KW-0129">CBS domain</keyword>
    <keyword evidence="12 14" id="KW-0868">Chloride</keyword>
    <keyword evidence="11" id="KW-0869">Chloride channel</keyword>
    <keyword evidence="6" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8 14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <keyword evidence="6" id="KW-0851">Voltage-gated channel</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="146"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="192"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="262"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="297"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="349"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="389"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="474"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="525"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="557"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="15">
        <location>
            <begin position="721"/>
            <end position="785"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU361221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW24465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="807" mass="87764" checksum="60F3C14D8D847BE6" modified="2014-02-19" version="1">MTAGMMEKEDDENYGDYERGIEIEGLLDGNEENGRYLSGLSDRSMAHTKPLLVKRINTTSQIAIVGANLSPIESLDYEIFYNEILKHDWRSRKKSQTIQYVVLKWGFALLIGLGTGLVGFFNSYAVENIAGFKLLMTTTLMSKNRYLEAFLAYAGVNICLAAAAAALCAFIAPAAAGSGIPEVKAYLNGVDAHYILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTCSWLRFFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRVAIQFCATGKCGLFGEGGLIMYDVGSANITYSAVDIFAVLLLGAVGGILGSIYNYLVDKVVRTYSIVNEKGPAFKISLVVTIALLTSCCFYFLPWVAHCIPCPSDSTSACPSSDESGEYQNFQCPPGYYNDLASLFLNTNDDAIRNLFSPKIIKEFHISSLFIYFATIYCLGIITYGIAIPSGLFIPVILAGATYGRLVSRIFELITTLDRGLFALLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLVLLVSKTVADSFNKGVYDLILQIKGLPYLEAHAEPYMKNLVAGDVVSGPLITFSGIEKVGIIWHALSATGHNGFPVIDEPPFTDAPELCGLVLRSHLLVLLKEKIFSNDKNFIDQSSFQRISALDFGKAGSGKGIKLEDLDIDEEDMDMYVDLHPITNASPYTVVETMPLAKAAIIFRQHGLRHMCVVPKSQGRPPVVGILTRHDFMPEHVLGLYPHIKSQKQSLGISVKNILSSVLKCCIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7C776</accession>
    <name>V7C776_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phospholipase/carboxylesterase/thioesterase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G083000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AB hydrolase superfamily. AB hydrolase 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C776"/>
    <dbReference type="STRING" id="3885.V7C776"/>
    <dbReference type="Gramene" id="ESW25999">
        <property type="protein sequence ID" value="ESW25999"/>
        <property type="gene ID" value="PHAVU_003G083000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2112">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WYDILAM"/>
    <dbReference type="OrthoDB" id="2418081at2759"/>
    <dbReference type="PhylomeDB" id="V7C776"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052689">
        <property type="term" value="F:carboxylic ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008474">
        <property type="term" value="F:palmitoyl-(protein) hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000232">
        <property type="entry name" value="Probable carboxylesterase SOBER1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050565">
        <property type="entry name" value="LYPA1-2/EST-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10655:SF17">
        <property type="entry name" value="LYSOPHOSPHOLIPASE-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10655">
        <property type="entry name" value="LYSOPHOSPHOLIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Phospholipase/carboxylesterase/thioesterase" evidence="6">
        <location>
            <begin position="55"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="29539" checksum="D427199A6F6A3DC7" modified="2014-02-19" version="1">MKGMDELREMKVINGSVILTITLLSTTILFLLFFSQNTTNPSSPQPLQPDSSSSSMSRARSFVLWLHGLGDSGPANEPIKTLFTSPEFRDTKWSFPSAPSAPVTCNYGSVMPSWFDILEIPVTAESPNDESSLLKAVQNVHATIDREIAAGVNPNNVFICGFSQGGALTLASVLLYPKTLGGGAIFSGWIPFNSSIGEQITPEAKQTPILWCHGMVDRTVLFEAGHAGPPFLEKNGVGCEFKAYPGLAHSINNEELRYLESWIKARLQSSSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8C3</accession>
    <name>V7C8C3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G010400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0496 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8C3"/>
    <dbReference type="SMR" id="V7C8C3"/>
    <dbReference type="STRING" id="3885.V7C8C3"/>
    <dbReference type="Gramene" id="ESW25136">
        <property type="protein sequence ID" value="ESW25136"/>
        <property type="gene ID" value="PHAVU_003G010400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQBT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QTRKART"/>
    <dbReference type="OrthoDB" id="679959at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007749">
        <property type="entry name" value="DUF677"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31113:SF38">
        <property type="entry name" value="UPF0496 PLANT-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31113">
        <property type="entry name" value="UPF0496 PROTEIN 3-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05055">
        <property type="entry name" value="DUF677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="214"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="242"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="371" mass="41874" checksum="845104F305492025" modified="2014-02-19" version="1">MGGHMSKKTPETSSGINFNTDMATELRSYEAAYKLDSDLQSFDTTVQARANQVIKTLAVGVEVRSLSFESLKQVTECLLEMNQEVVKVILSSKKDIWKNQELFELVEEYLENSLQTLDLCTALEKCLKRARDSQLLIFAALQQFEEETELGEKRYTRTLQELKNFKASGDPFTEEFFQMYQSVYNQQILMLEKLQVRQSKLDKKVKQVHTWRKVSSMIFVATVAAVLICSVVAAAIASPHVATILAAVSAVPIGSMGKWIDTMLKSYETAVRGHREVIISMQVGTYVAIKDLDSIRVLIDKVEIEIESVLQNVEFAIEDDGVKVAIEEMKKKLGVFMKNVEDLGVQADTCSRDIIRARTVVLQRIIKLPNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAD3</accession>
    <name>V7CAD3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G072800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW25876"/>
        <property type="gene ID" value="PHAVU_003G072800g"/>
    </dbReference>
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        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="118550at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
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    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009723">
        <property type="term" value="P:response to ethylene"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009739">
        <property type="term" value="P:response to gibberellin"/>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
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        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="transcription factor MYB1R1"/>
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        <property type="entry name" value="Homeodomain-like"/>
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    </dbReference>
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        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
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        <property type="entry name" value="Myb_dom"/>
    </dbReference>
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        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052245">
        <property type="entry name" value="Plant_Stress_Dev_TF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017884">
        <property type="entry name" value="SANT_dom"/>
    </dbReference>
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        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TRANSCRIPTION FACTOR KUA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44191:SF64">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB1R1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51293">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="9">
        <location>
            <begin position="62"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="62"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="SANT" evidence="8">
        <location>
            <begin position="70"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="24"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="178"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="24"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="206" mass="23087" checksum="5FBE3E4A9B0415EE" modified="2014-02-19" version="1">MCAAEKDGIMLFGVRLTVSDNNPTSLRKSASMNNLPPYSESPPPHHRNAGYASDDVIHLCRRTRKPGVPWTEEEHRQFLLGLENVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTHNLQRRRSSLFDITTDSVKEDEQTVPSARLKPVLPAPPSLKMDELELNGRSVWLKLRLPEPEEPSPATSEVVSNGNLSGDGDMITVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAI2</accession>
    <name>V7CAI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">UBC core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_003G113800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAI2"/>
    <dbReference type="SMR" id="V7CAI2"/>
    <dbReference type="STRING" id="3885.V7CAI2"/>
    <dbReference type="Gramene" id="ESW26368">
        <property type="protein sequence ID" value="ESW26368"/>
        <property type="gene ID" value="PHAVU_003G113800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0428">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHPANAN"/>
    <dbReference type="OrthoDB" id="1158011at2759"/>
    <dbReference type="PhylomeDB" id="V7CAI2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd23799">
        <property type="entry name" value="UBCc_UBE2J"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ubiquitin-conjugating enzyme E2 32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.110.10">
        <property type="entry name" value="Ubiquitin Conjugating Enzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050113">
        <property type="entry name" value="Ub_conjugating_enzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000608">
        <property type="entry name" value="UBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016135">
        <property type="entry name" value="UBQ-conjugating_enzyme/RWD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24067">
        <property type="entry name" value="UBIQUITIN-CONJUGATING ENZYME E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00179">
        <property type="entry name" value="UQ_con"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00212">
        <property type="entry name" value="UBCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54495">
        <property type="entry name" value="UBC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50127">
        <property type="entry name" value="UBC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="275"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="UBC core" evidence="3">
        <location>
            <begin position="10"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="171"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW26368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="34554" checksum="A5B23757F0423984" modified="2014-02-19" version="1">MAEKHNLKNPAVKRILQEFKEMQSNPSPDYISLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPSGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLNYKKEDRQALAIKSREAPPKFGTPERQRLIDEIHEYMLSKSSPVPEGGLSQVSEEQSNTEEAETLVNLQNPEPLPAGEGIQEEAGDRIIEEQEYPVNANPNLAGVEVSMANTSSVPINQLLQTSDAMVQNLKPETRAQKPDDRLFTLAAIGLTIAIVVLLLKKFVKSTEHGAVFMDES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAL4</accession>
    <name>V7CAL4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Galactokinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G116700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GHMP kinase family. GalK subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAL4"/>
    <dbReference type="SMR" id="V7CAL4"/>
    <dbReference type="STRING" id="3885.V7CAL4"/>
    <dbReference type="Gramene" id="ESW26398">
        <property type="protein sequence ID" value="ESW26398"/>
        <property type="gene ID" value="PHAVU_003G116700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0631">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GFHDTYF"/>
    <dbReference type="OrthoDB" id="187738at2759"/>
    <dbReference type="PhylomeDB" id="V7CAL4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004335">
        <property type="term" value="F:galactokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1440.340:FF:000002">
        <property type="entry name" value="Galactokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.230.10:FF:000046">
        <property type="entry name" value="galactokinase-like isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000705">
        <property type="entry name" value="Galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019741">
        <property type="entry name" value="Galactokinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019539">
        <property type="entry name" value="GalKase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013750">
        <property type="entry name" value="GHMP_kinase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006203">
        <property type="entry name" value="GHMP_knse_ATP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006206">
        <property type="entry name" value="Mevalonate/galactokinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_Su5_D2-typ_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribsml_uS5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00131">
        <property type="entry name" value="gal_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10457:SF7">
        <property type="entry name" value="GALACTOKINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10457">
        <property type="entry name" value="MEVALONATE KINASE/GALACTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10509">
        <property type="entry name" value="GalKase_gal_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08544">
        <property type="entry name" value="GHMP_kinases_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000530">
        <property type="entry name" value="Galactokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00473">
        <property type="entry name" value="GALCTOKINASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00959">
        <property type="entry name" value="MEVGALKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="GHMP Kinase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="Ribosomal protein S5 domain 2-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00106">
        <property type="entry name" value="GALACTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00627">
        <property type="entry name" value="GHMP_KINASES_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Galactokinase N-terminal" evidence="8">
        <location>
            <begin position="38"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP kinase N-terminal" evidence="6">
        <location>
            <begin position="146"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="GHMP kinase C-terminal" evidence="7">
        <location>
            <begin position="393"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF10509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="497" mass="54420" checksum="D20B74E03A243DFE" modified="2014-02-19" version="1">MAKHEELPIPIYDNLEFVYGGGSALEEAQLRFDHLKSKFFEVFSHHPQVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNEAEKVLRIANVNGEKYSVCTYPADPLQEIDLKNHKWGHYFICGYKGFYDYAKLKGVDVGEPVGLDVLVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKELAQVTCACERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVLECRLASIVLAIKLGMDPKEAISKVSTLSDVEGLCVSFAGIHNSSDPVLAVKEYLKEEPYTAEEIEEVTGEKLTSFLSNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSNLSDEDKLKKLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVKENIVPQFILNLKECFYQSRIDKDVIKKTDLGLYVFASKPSSGAAILKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBM6</accession>
    <name>V7CBM6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotransferase class V domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G213100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBM6"/>
    <dbReference type="STRING" id="3885.V7CBM6"/>
    <dbReference type="Gramene" id="ESW27564">
        <property type="protein sequence ID" value="ESW27564"/>
        <property type="gene ID" value="PHAVU_003G213100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2142">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HPHHENR"/>
    <dbReference type="OrthoDB" id="10264306at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14237:SF64">
        <property type="entry name" value="MOLYBDENUM COFACTOR SULFURASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14237">
        <property type="entry name" value="MOLYBDOPTERIN COFACTOR SULFURASE MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="601" mass="67526" checksum="86D38FE276A74EF2" modified="2014-02-19" version="1">MHPSRAEAAAASQPCFNGCFPSPLLASERSHKPKISNVTSSHDDFAAATSSSLHPHTQFTNPESLPSLHDSYISFTKAFPQFSATSQVDQIRAQEYYHLNHSNACFDYTGYGLFSYAQQHTPCPTTSIASSSSSSSSSLSYFTSDASFFDISYKSVNLQSQVLYGGHESELEARIRKRIMSFMNVSEAEYTLVFIANEVSAFKIVADSFQFQSNRRLLTVYDHSSEALDVMIESCKKQGVRVLSSEFSWPNLGIQRRKLKKMVMNKREKRKGGLFVFPLHSRVTGAQYSYGWMSTAQENGWCVLLDVCSLKPKEMDTLGMLLFKPDFMVCSFYKVFGKNPSGVGCLFVKRSSVSALKDPSNATSIGIISLVPTFKPESEQVVIETETAHPQEGPLSTSEIEELSTPFDSSMDRNRLGTKNDGSEIHCRGLDHADSVGLLLISNRTKYLVNWLVNALMSLKHPHHENRLSLIRVYGPKISSFRGPAVAFNIFDWKGEKIDPALVQKLADRNNISINRSFLRNIRFSDKNEEERVCEVEGLGLSKKTRSHESGIYVVTAALGLLTNFEDIYRLWAFLSRFLDADFVEKEKWRYIALNQKTVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBT5</accession>
    <name>V7CBT5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">HP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G143200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the villin/gelsolin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBT5"/>
    <dbReference type="SMR" id="V7CBT5"/>
    <dbReference type="STRING" id="3885.V7CBT5"/>
    <dbReference type="Gramene" id="ESW26730">
        <property type="protein sequence ID" value="ESW26730"/>
        <property type="gene ID" value="PHAVU_003G143200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0443">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LIFVWIG"/>
    <dbReference type="OrthoDB" id="6375767at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051693">
        <property type="term" value="P:actin filament capping"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007015">
        <property type="term" value="P:actin filament organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051014">
        <property type="term" value="P:actin filament severing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd11290">
        <property type="entry name" value="gelsolin_S1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11289">
        <property type="entry name" value="gelsolin_S2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11292">
        <property type="entry name" value="gelsolin_S3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11293">
        <property type="entry name" value="gelsolin_S4_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11288">
        <property type="entry name" value="gelsolin_S5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11291">
        <property type="entry name" value="gelsolin_S6_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000001">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000002">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000033">
        <property type="entry name" value="Villin-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000039">
        <property type="entry name" value="Villin-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000028">
        <property type="entry name" value="Villin-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.20.10:FF:000038">
        <property type="entry name" value="Villin-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.20.10">
        <property type="entry name" value="Severin"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.950.10">
        <property type="entry name" value="Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029006">
        <property type="entry name" value="ADF-H/Gelsolin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007123">
        <property type="entry name" value="Gelsolin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007122">
        <property type="entry name" value="Villin/Gelsolin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003128">
        <property type="entry name" value="Villin_headpiece"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036886">
        <property type="entry name" value="Villin_headpiece_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11977">
        <property type="entry name" value="VILLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11977:SF138">
        <property type="entry name" value="VILLIN-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00626">
        <property type="entry name" value="Gelsolin"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02209">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00597">
        <property type="entry name" value="GELSOLIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00262">
        <property type="entry name" value="GEL"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00153">
        <property type="entry name" value="VHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55753">
        <property type="entry name" value="Actin depolymerizing proteins"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47050">
        <property type="entry name" value="VHP, Villin headpiece domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51089">
        <property type="entry name" value="HP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0117">Actin capping</keyword>
    <keyword evidence="7" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="6" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="HP" evidence="10">
        <location>
            <begin position="893"/>
            <end position="958"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="752"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="885"/>
            <end position="909"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="885"/>
            <end position="895"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW26730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="958" mass="106824" checksum="6834BEAB394B8FCB" modified="2014-02-19" version="1">MSVSMRDLDPAFKGAGQKAGLEIWRIENFNPVPIPQSSYGKFFTGDSYMILKTTASKSGALRYDIHYWLGKKTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVSSGFKHVEAEEHTIRLFVCKGKHVVHVKEVPFARSSLNHDDIFILDTESKIFQFNGSNSCIQERAKALEVVQFIKDTYHDGKCEIASIEDGKLMSDSETGEFWGCFGGFAPLPRKTVSDDDKSADSHPPKLLCVDKGKTEPVETDSLTKEMLETNKCYIIDCGLEVFAWMGRNTSLDERKSASGAAEKLVSGAGRPKSHIIRVIEGFETVMFKSKFDSWPQTTQVMSEEGRGKVAALLKRQGLDVKGLLKSEPVKEEPQPYIDCTGNLQVWRVNGKDKILLPATDQSKFYNGDCYIFQYSYPGEDKEEHLIGTWIGKASVEEERASALSLASKMVESMKFLPSLVRIYEGSEPIQFHAILQSCIVFKGGLSDGYKNYIAEKEIPDATYSEDGVALFRIQGFGPDNMQAIQVEPVASSLNSTYCYILHSGSTVFTWSGGLATSDDQELLDRMLDLIKPDLQSKSHKEGVESELFWDLLGGKSEYPGQKIARDEESDPHLVSCDFSKGNLKVKEIYNFSQDDLMTEDIYILDCHSEIFVWLGQQVDAKGRMQALTIGEKFLEHDFLLEKLSREAPIYVVKEGNEPPFFTRFFKWESAKSTMLGNSFQRKLAIVKSGGAALVLKHKRRSSVSYGGRSGGAPDSQRSRSMSVSPDRVRVRGRSPAFNALAATFENTNTRNLSTPPPMVRKLYPKSGAQDTAKPAPKLSAISHLTSSFEQPSARENLIPRSQKVSLVTAISNPEIIAEGASMSRRIESLTIEEDVKEGEAEDDESLPVYPHDRINTESTDPVTDIDVTKREAYLSPAEFQEKLGMAKTEFYKLPKWKQNKLKMAVQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC61</accession>
    <name>V7CC61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Piwi domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G160200g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the argonaute family. Ago subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC61"/>
    <dbReference type="SMR" id="V7CC61"/>
    <dbReference type="STRING" id="3885.V7CC61"/>
    <dbReference type="Gramene" id="ESW26938">
        <property type="protein sequence ID" value="ESW26938"/>
        <property type="gene ID" value="PHAVU_003G160200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1041">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CICEAEL"/>
    <dbReference type="OrthoDB" id="10252740at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051607">
        <property type="term" value="P:defense response to virus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031047">
        <property type="term" value="P:regulatory ncRNA-mediated gene silencing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02846">
        <property type="entry name" value="PAZ_argonaute_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2300:FF:000110">
        <property type="entry name" value="Argonaute 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.260.10">
        <property type="entry name" value="paz domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032472">
        <property type="entry name" value="ArgoL2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032473">
        <property type="entry name" value="Argonaute_Mid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003100">
        <property type="entry name" value="PAZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036085">
        <property type="entry name" value="PAZ_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003165">
        <property type="entry name" value="Piwi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22891">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16488">
        <property type="entry name" value="ArgoL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16487">
        <property type="entry name" value="ArgoMid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02170">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02171">
        <property type="entry name" value="Piwi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00950">
        <property type="entry name" value="Piwi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101690">
        <property type="entry name" value="PAZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50821">
        <property type="entry name" value="PAZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50822">
        <property type="entry name" value="PIWI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0943">RNA-mediated gene silencing</keyword>
    <feature type="domain" description="PAZ" evidence="5">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Piwi" evidence="6">
        <location>
            <begin position="207"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="376" mass="42585" checksum="F4A70227CD41E993" modified="2014-02-19" version="1">MYGYTIIYSHLSCLQVGSQKKVNYLPLEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETGILKAIQQNNYEYNPYVKEFGISIDSKLASVEARVLPAPWLKYHDTGREKEHLQQVGQWNMMNKKVINGSIVRYWACINFSRSIQEIARGFCQQLVQMCQISGMEFSLDPVIPIYSARPDMVKKALKYVHSAVRDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLSKHVFKINRQYLANVALKINVKLGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDPCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKARGQKPLRIIFYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCG3</accession>
    <name>V7CCG3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G235100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCG3"/>
    <dbReference type="SMR" id="V7CCG3"/>
    <dbReference type="STRING" id="3885.V7CCG3"/>
    <dbReference type="Gramene" id="ESW27824">
        <property type="protein sequence ID" value="ESW27824"/>
        <property type="gene ID" value="PHAVU_003G235100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZP9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIVKAPC"/>
    <dbReference type="OrthoDB" id="1919921at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36765">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36765:SF1">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="167"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="24011" checksum="D508D2989F12AA43" modified="2014-02-19" version="1">MAEGEPTNGYCSSSGEEDGDAAWRAAIHSIAQTTTYVSSTTKHGHPNADDDDYSKPKTQQLKHYHLKAQKLLNDILENTIEIVRKPVPVEDDDPKINESGIRLFKHAKPGIVFDHADEPQPLRKRPRILPGEDIDEKSKKFRKRIRSVAVNGIDILAAANDSCKKSLARLEAKDAAAKAKVKREEERVENLKKIRGERWLPSMAKEMQVKIQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCQ6</accession>
    <name>V7CCQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G249400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCQ6"/>
    <dbReference type="STRING" id="3885.V7CCQ6"/>
    <dbReference type="Gramene" id="ESW27982">
        <property type="protein sequence ID" value="ESW27982"/>
        <property type="gene ID" value="PHAVU_003G249400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0907">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KDHCAHA"/>
    <dbReference type="OrthoDB" id="1381185at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016671">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010190">
        <property type="term" value="P:cytochrome b6f complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044241">
        <property type="entry name" value="TxlA/HCF164"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47353">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47353:SF1">
        <property type="entry name" value="THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW27982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="15031" checksum="0EE5B31FA845A8B7" modified="2014-02-19" version="1">MSHFSLSLSTLHIFSPHFKIHQPLQILPIPFQRRSIRKVKILNQNLHKSSTTEKCVAELGNTKGTSTPEGVPRKFPSKDLKKKIAIVSFIGALGLLLATRLHFFGVPSKDHCAHALPSEEAQHNGKSTVVEFDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCU8</accession>
    <name>V7CCU8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Proline-rich protein PRCC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G140900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCU8"/>
    <dbReference type="SMR" id="V7CCU8"/>
    <dbReference type="STRING" id="3885.V7CCU8"/>
    <dbReference type="Gramene" id="ESW26701">
        <property type="protein sequence ID" value="ESW26701"/>
        <property type="gene ID" value="PHAVU_003G140900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3903">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QNAVNYE"/>
    <dbReference type="OrthoDB" id="206969at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018800">
        <property type="entry name" value="PRCC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13621">
        <property type="entry name" value="PROLINE-RICH PROTEIN PRCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13621:SF2">
        <property type="entry name" value="PROLINE-RICH PROTEIN PRCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10253">
        <property type="entry name" value="PRCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="29"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW26701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="375" mass="41084" checksum="7BC3D51FD0C2BB20" modified="2014-02-19" version="1">MDSLLANYASSEEEEEEQQQPIPPKTTTSFSSLPQPKSSLFQSLSQPKSSSSFFQSLPQPKSSSSSFFQSLPPPKQPSLATSSETADPKPKPQIPQPQPKRVVQFRPPIIPLTNPTQLLDDDDEEEEEERDRRKKKLVSSTQTSSVKSFLANIPAPRNAATLGVHASSGSGRRSIIETESPALETASNSGGSSSVTVDQSVGDYGNDENYQYATDQYAGYYGNYGSVPEPEAGAAAYGTEQYGNYGEAYGDYGQYGNNWGDVSAAPVSEASGISESVVRIPGKRGRHEVPMEVIEVKQDELIKNRPREDQVKLTGIAFGPTYQPASTKGKPTKLHKRKHQIGSLYFDMRQNEMKLAERRAKGMLTKAETQAKYGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDZ1</accession>
    <name>V7CDZ1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G284000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDZ1"/>
    <dbReference type="SMR" id="V7CDZ1"/>
    <dbReference type="Gramene" id="ESW28407">
        <property type="protein sequence ID" value="ESW28407"/>
        <property type="gene ID" value="PHAVU_003G284000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TTFEAWE"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000001">
        <property type="entry name" value="MYB-related transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000349">
        <property type="entry name" value="Transcription factor MYB39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015495">
        <property type="entry name" value="Myb_TF_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47994:SF5">
        <property type="entry name" value="F14D16.11-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="11"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="11"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="64"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="6">
        <location>
            <begin position="64"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW28407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="39550" checksum="B215EE0DFFE6AE4A" modified="2014-02-19" version="1">MGRSPSSSSNESNVKKGPWTAEEDEKLMDYISKHGRGTWRTLPKHAGLNRNGKSCRLRWENYLKPDIKRGKFTQEEELFIINLHSVLGNKWSKIATSLPGRTDNEIKNYWNTTIRKKLLQKGIDPETHRPRTSLNHLMNLFPLLGMSNLGTSMSSWTNPTGLQADVTQLAKLQLLQNMLQLMNNTSLINITNPYLVDNQILNPPLDTFLNGTNTLQVRDPMLYANPHGNNIPNLFSQTHSDYSLQNIFKSGIEIENESKYQEVLSYTQNINTSQQNEVENLLPALVASCTPRTTSFNKMESNYNAAQKSTQSPFSTTFEAWEKFLIDDDDETSSSYWKEILEYVYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF48</accession>
    <name>V7CF48_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DM2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_003G210500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF48"/>
    <dbReference type="SMR" id="V7CF48"/>
    <dbReference type="STRING" id="3885.V7CF48"/>
    <dbReference type="Gramene" id="ESW27536">
        <property type="protein sequence ID" value="ESW27536"/>
        <property type="gene ID" value="PHAVU_003G210500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2570">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VMDSKHH"/>
    <dbReference type="OrthoDB" id="10263741at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="CDD" id="cd10568">
        <property type="entry name" value="SWIB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.245.10">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019835">
        <property type="entry name" value="SWIB_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036885">
        <property type="entry name" value="SWIB_MDM2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003121">
        <property type="entry name" value="SWIB_MDM2_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13844">
        <property type="entry name" value="SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02201">
        <property type="entry name" value="SWIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00151">
        <property type="entry name" value="SWIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47592">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51925">
        <property type="entry name" value="SWIB_MDM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DM2" evidence="2">
        <location>
            <begin position="294"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW27536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="513" mass="57568" checksum="C441B9BDDA8666BA" modified="2014-02-19" version="1">MNNNINNPAKNAATPSFFANPGAPTIPMNHPSPHLLSQAQPQPQAGASHFHGHFQLSQPQTHVLAQPHPIPHPQVHNNSNTNANVATPAPPKRANHKPPSRPPGSSNATQSSAFKTMELTLAPPRKKRSFPEKLIPDKVAKLVPESAIYAKLLELETHIDSVLVRKKIDVQENVRSPRCVRRTLRIYVYNTFSKQVKVEPGKIDVEELSWVLRITGRMLEDGKDPVADGVLPKENPKFSAFFKKITIYLDQGFYPDNHVVVWDSARSAAQRDGFEVKRKGDKEFTAVVRMSMNHSPDKFVVSAQLARVLGVEFDSRSRIIAALWHYVKAKKLQSPNDPSFFMCDASLQRVFGEEKMKFSVASQKISQHLSPPQPIHLEHKIKLSGNCPAGATCYDVQVDVPLPLEKDMSSFLASTEKHKEIDVFDKLICDSIKKIHEHHRRRAFFLGFSQSPAEFINALIASQSKDLKLVAGDVSHNVENERRSEFYNQPWVEDAVVRYLTRKNARSDAPGNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFY6</accession>
    <name>V7CFY6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Proteasome subunit alpha type</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G264700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the peptidase T1A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFY6"/>
    <dbReference type="SMR" id="V7CFY6"/>
    <dbReference type="STRING" id="3885.V7CFY6"/>
    <dbReference type="Gramene" id="ESW28170">
        <property type="protein sequence ID" value="ESW28170"/>
        <property type="gene ID" value="PHAVU_003G264700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0183">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ICMLDHH"/>
    <dbReference type="OrthoDB" id="431557at2759"/>
    <dbReference type="PhylomeDB" id="V7CFY6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019773">
        <property type="term" value="C:proteasome core complex, alpha-subunit complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03755">
        <property type="entry name" value="proteasome_alpha_type_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.20.10:FF:000004">
        <property type="entry name" value="Proteasome subunit alpha type-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050115">
        <property type="entry name" value="Proteasome_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023332">
        <property type="entry name" value="Proteasome_alpha-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000426">
        <property type="entry name" value="Proteasome_asu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF003075">
        <property type="entry name" value="PRK03996.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11599">
        <property type="entry name" value="PROTEASOME SUBUNIT ALPHA/BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10584">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00948">
        <property type="entry name" value="Proteasome_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00388">
        <property type="entry name" value="PROTEASOME_ALPHA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51475">
        <property type="entry name" value="PROTEASOME_ALPHA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="2 3 4" id="KW-0647">Proteasome</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Proteasome alpha-type subunits" evidence="5">
        <location>
            <begin position="4"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="249" mass="27178" checksum="6D8F92F6EA9474F0" modified="2014-02-19" version="1">MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDSRTVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDAIVAEIEVEKAAAEAAKKAPPKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG53</accession>
    <name>V7CG53_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">long-chain-alcohol oxidase</fullName>
            <ecNumber evidence="5">1.1.3.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G278200g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a long-chain primary fatty alcohol + O2 = a long-chain fatty aldehyde + H2O2</text>
            <dbReference type="Rhea" id="RHEA:22756"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:17176"/>
            <dbReference type="ChEBI" id="CHEBI:77396"/>
            <dbReference type="EC" id="1.1.3.20"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.3.20" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG53"/>
    <dbReference type="STRING" id="3885.V7CG53"/>
    <dbReference type="Gramene" id="ESW28333">
        <property type="protein sequence ID" value="ESW28333"/>
        <property type="gene ID" value="PHAVU_003G278200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSD8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CFQGCKW"/>
    <dbReference type="OrthoDB" id="269227at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046577">
        <property type="term" value="F:long-chain-alcohol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012400">
        <property type="entry name" value="Long_Oxdase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46056">
        <property type="entry name" value="LONG-CHAIN-ALCOHOL OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46056:SF18">
        <property type="entry name" value="LONG-CHAIN-ALCOHOL OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028937">
        <property type="entry name" value="Lg_Ch_AO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="FAD/NAD(P)-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="126"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="Glucose-methanol-choline oxidoreductase N-terminal" evidence="16">
        <location>
            <begin position="351"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="Glucose-methanol-choline oxidoreductase C-terminal" evidence="17">
        <location>
            <begin position="673"/>
            <end position="798"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="42"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="235"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="746"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="304"/>
            <end position="319"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR028937-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR028937-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF05199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="814" mass="89715" checksum="3B59DE93A3DC4DAE" modified="2014-02-19" version="1">MENNGESHSRSASFRMGFGLSVNEAKVHTVLHLGTPTLLHAHGDADVGDEERDKHQKPLTNSLSPRQMKSLVALCDTIIPSIDNNVVRSSDDESVANFYKTSASMAGTPQHLGKLISEKVKHPSTWLLLLTLWLLSTWFGTLILCGMASVSSRFPFFHSYPEMSLLKRQRVMQSWSLSYLRPLRMFFRTIKLLTLLTFFTQVDEAEENPSWKAIGYCGPDPEFKAQLKNNFLHRTSKEEQHQKKDDDDDEEEEFRGPLHKGLVHLNYPRDMIKNSLRRFGFSVSTISKKHEASNLSSPSLVIQCDAVVVGSGSGGGVAAGVLANAGYKVLVLEKGSYCARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAVNWSASIKTPQHVCKEWCDLHELELFESKLYREAMDAVCGKMGVQSEVEEEGFNNEVLRRGCLEMGYHVCNIPRNASSDHYCGWCCMGCKDGNKKSTSETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGSEKKTARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKKSGLKNENIGKNLHLHPVAMAWGYFPDSSSPKMWPEKHKKSYEGGIMTAMSTVVAQFDKTGYGAVIQTPSLHPGMFSILMPWTSGKDMKDRMHKFSRTAHVFALARDQGSGTVNSPSLISYELKDVDKENLETGIEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESSMSLTDLTTPLCSAHQMGSCKMGTNPSDSVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQYVAEVLRRKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGX0</accession>
    <name>V7CGX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_003G294300g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGX0"/>
    <dbReference type="SMR" id="V7CGX0"/>
    <dbReference type="STRING" id="3885.V7CGX0"/>
    <dbReference type="Gramene" id="ESW28530">
        <property type="protein sequence ID" value="ESW28530"/>
        <property type="gene ID" value="PHAVU_003G294300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0032">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHRRKDD"/>
    <dbReference type="OrthoDB" id="40902at2759"/>
    <dbReference type="PhylomeDB" id="V7CGX0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05117">
        <property type="entry name" value="STKc_CAMK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001864">
        <property type="entry name" value="Calcium-dependent protein kinase SK5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000085">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000101">
        <property type="entry name" value="CDPK-related kinase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:001294">
        <property type="entry name" value="CDPK-related kinase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050205">
        <property type="entry name" value="CDPK_Ser/Thr_kinases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24349">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="12" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7" id="KW-0519">Myristate</keyword>
    <keyword evidence="9 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="145"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="16">
        <location>
            <begin position="39"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="16">
        <location>
            <begin position="53"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="16">
        <location>
            <begin position="70"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW28530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="599" mass="66920" checksum="AB092771B4D264AA" modified="2014-02-19" version="1">MGVCTSKPQKPNPYALREAEGEGDPSQIPKAPISPAGAENHRRKDDVTAGKQSPFFPFYSPSPARFLKKSPAPAGGSRSAASTPRRFFKRPFPPPSPAKHIRAVLARRQGKKAAAAISEEGEDGDGGAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLIRFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTKKDETSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDETPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDVLIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFSLLEPSKNGSISLENVNKALMKYATDAMKESRIPDFLSSLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CH93</accession>
    <name>V7CH93_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">BTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G011000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the NPH3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CH93"/>
    <dbReference type="SMR" id="V7CH93"/>
    <dbReference type="Gramene" id="ESW28708">
        <property type="protein sequence ID" value="ESW28708"/>
        <property type="gene ID" value="PHAVU_002G011000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QYIX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHYIKSK"/>
    <dbReference type="OrthoDB" id="407106at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.710.10">
        <property type="entry name" value="Potassium Channel Kv1.1, Chain A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000210">
        <property type="entry name" value="BTB/POZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043454">
        <property type="entry name" value="NPH3/RPT2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027356">
        <property type="entry name" value="NPH3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011333">
        <property type="entry name" value="SKP1/BTB/POZ_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32370">
        <property type="entry name" value="OS12G0117600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00651">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03000">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54695">
        <property type="entry name" value="POZ domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50097">
        <property type="entry name" value="BTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51649">
        <property type="entry name" value="NPH3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="BTB" evidence="6">
        <location>
            <begin position="55"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="NPH3" evidence="7">
        <location>
            <begin position="214"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="322"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW28708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="439" mass="49871" checksum="11917DC6B1D41873" modified="2014-02-19" version="1">MRGWKHSAAIETIYEEEHRSSSAPSLSPSPSFSSFSPPSLHSIVNAWSLHSASQPNVFILVHGTSFRLHQDRMISQSSYLKQHLTGVSNVTISPPLNITAETFATVAEFCYTHKVHLTPTNVAAIRVAAELLGMTEGENLCGVAESYFERVVAVDASMVMRSCVTMLPEAETTASLVSKCIEALIWNGDVSFLDDVVEMHSQDFQMVASYLNKRLPDHDALYKIIDIYLKENKYGKLTEEQQTEICNNLDCSKLSPRILVECVQNPRMSLKFIMGAILVEHLKTRHSLVVATTTTTHQTERTSLRKILQHDHHHTTHIEETMDSTYNRIQNLEKELMDMKNHLQHHQFMDEKKNNNALTKERAVSFHYEPPQNSRIQRGGRGSISSSSLMLDNIITKKQNEVKMCVANKTSIDMTRFFPRNFKFSLKNAFGCRMQRQAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHS2</accession>
    <name>V7CHS2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">L-ascorbate oxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G021900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the multicopper oxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHS2"/>
    <dbReference type="SMR" id="V7CHS2"/>
    <dbReference type="Gramene" id="ESW28835">
        <property type="protein sequence ID" value="ESW28835"/>
        <property type="gene ID" value="PHAVU_002G021900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1263">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EDTMQSW"/>
    <dbReference type="OrthoDB" id="2121828at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13846">
        <property type="entry name" value="CuRO_1_AAO_like_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000012">
        <property type="entry name" value="Monocopper oxidase-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.40.420:FF:000016">
        <property type="entry name" value="Monocopper oxidase-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="entry name" value="Cupredoxins - blue copper proteins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001117">
        <property type="entry name" value="Cu-oxidase_2nd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034273">
        <property type="entry name" value="CuRO_1_AAO-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="MULTI-COPPER OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709:SF491">
        <property type="entry name" value="MULTI-COPPER OXIDASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00394">
        <property type="entry name" value="Cu-oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="Cupredoxins"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755805" description="L-ascorbate oxidase" evidence="3">
        <location>
            <begin position="25"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="6">
        <location>
            <begin position="35"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="161"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="5">
        <location>
            <begin position="379"/>
            <end position="515"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="540" mass="60351" checksum="8E22299842CC3F25" modified="2014-02-19" version="1">MGSATLLHLLCFVIASVSVSLVQAEDAYKFYTWTVTYGNLSPLGSPQQVILINGQFPGPKLDLVTNDNVILNLINKLDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTYSYFPSTQLHKAAGGFGGLNVYHRSVIPIPYQNPDGDFTLLIGDWYKTNHKTLRQTLDSGKSIGLPDGLLINGQPHSTFTGNQGKTYMFRISNVGLSTSINFRIQGHTLKLVEVEGSHTIQNIYDSLDVHVGQSVSLLVTLNQPPKDYYIVASTRFTETPLTTTAVLHYSNSFSSALGPVPPSPVDKYDFDWSMKQARTYRWNLTANAARPNPQGSFHYGKITPTKVIKLANSAPSINGKLRYAVNSVSYVNPDTPLKLADYFNIPGIFSVNLLQNTPSSGPGYIATSVLPTSLHDFIEVIFQNNENTMQSWHLDGYDFWVIGYGFGQWSDASRKTYNLVDALTRHTAQVYPKSWTAILVSLDNQGMWNLRSAIWERQYLGQQFYLRVWNAQRSLANEYDIPNNVLLCGKAVGHHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ74</accession>
    <name>V7CJ74_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fungal lipase-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G1349001g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ74"/>
    <dbReference type="Gramene" id="ESW30222">
        <property type="protein sequence ID" value="ESW30222"/>
        <property type="gene ID" value="PHAVU_002G1349001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2088">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GRIMHIT"/>
    <dbReference type="OrthoDB" id="1405231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00519">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46023:SF6">
        <property type="entry name" value="LIPASE CLASS 3 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46023">
        <property type="entry name" value="LIPASE CLASS 3 PROTEIN-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fungal lipase-type" evidence="2">
        <location>
            <begin position="145"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="39621" checksum="8AE085A3F6504CD9" modified="2014-02-19" version="1" fragment="single">MSGSNGNNGVRVERRELAAPKNLMEVIIVLAEAIMLFCYTERRHMFNLPRVIAHAVLDKGKKTIGSECRERSDCVELKGSQILKELYELKRMLECAKLFSSFKRSPSSLFSGLEKKDILSRKRSARILKPAFTVIRDRQSKSFIVFIRGTRSIKDTLTDALCAPVPFDHVICIGHERHNIVSGHAHRGMVSAADWIRNRCIPVLHDANKLYPHFKIKIVGHSLGGGTAALLTYKLREIQQFSSTTCVTFGPAACMTLELAEFGKSFITSIVNGFDIVPTLSVSSFHDFISEGQTKNKNIVICFILCTSAVGTHLSLAKAIAGHAVKSCTEVVKKHKHSLLSSIQHENIQTFTTRKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJQ5</accession>
    <name>V7CJQ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_002G146300g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">Interacts with ARAC5 and ARAC10.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJQ5"/>
    <dbReference type="SMR" id="V7CJQ5"/>
    <dbReference type="STRING" id="3885.V7CJQ5"/>
    <dbReference type="Gramene" id="ESW30354">
        <property type="protein sequence ID" value="ESW30354"/>
        <property type="gene ID" value="PHAVU_002G146300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KWANHVV"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="PhylomeDB" id="V7CJQ5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051020">
        <property type="term" value="F:GTPase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000558">
        <property type="entry name" value="Receptor-like cytosolic serine/threonine-protein kinase RBK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000335">
        <property type="entry name" value="receptor-like cytosolic serine/threonine-protein kinase RBK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046958">
        <property type="entry name" value="RBK1/2/STUNTED"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47987">
        <property type="entry name" value="OS08G0249100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47987:SF7">
        <property type="entry name" value="PROTEIN KINASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 14" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="16">
        <location>
            <begin position="121"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00063228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW30354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="435" mass="48602" checksum="C6E2A0A5A4A6B415" modified="2014-02-19" version="1">MAFSRNHAKEFMSDGEGSPRAILETPVSETESETESSLDSGKEGYTLPWKSMVDVFKFKSVRKLTSIPLLSVSHDISRKGLTKKLARIRSAEEGIDIGAIPAKPSWRNFDYEELATATNNFSSENLVGKGGHAEVYKGNLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHTNATHLVGFGVDGGLFFVLQLAPHGSLSSLLFDSEGLDWGKRFKIAIGVADGLHYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPNKWANHVVFPIEGTFGYLAPEYFMHGIVDERTDVFAFGVLLLELITGRRAVDSDSRQSLVTWAKPLLDTNNVKDIADPRLGEEYDHQEMLRVMVTASMCVHHASSKRPFMNKVVQMLNGEESIIDLKQNSMAPKSQLLEACDLEDYTCSSYLKDMSRHMQLIME</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL69</accession>
    <name>V7CL69_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">60S ribosomal protein L27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G190100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eukaryotic ribosomal protein eL27 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL69"/>
    <dbReference type="SMR" id="V7CL69"/>
    <dbReference type="STRING" id="3885.V7CL69"/>
    <dbReference type="Gramene" id="ESW30879">
        <property type="protein sequence ID" value="ESW30879"/>
        <property type="gene ID" value="PHAVU_002G190100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3418">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQWFFTK"/>
    <dbReference type="OrthoDB" id="1389615at2759"/>
    <dbReference type="PhylomeDB" id="V7CL69"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06090">
        <property type="entry name" value="KOW_RPL27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.770:FF:000001">
        <property type="entry name" value="60S ribosomal protein L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.770">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001141">
        <property type="entry name" value="Ribosomal_eL27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018262">
        <property type="entry name" value="Ribosomal_eL27_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041991">
        <property type="entry name" value="Ribosomal_eL27_KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038655">
        <property type="entry name" value="Ribosomal_eL27_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10497">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01777">
        <property type="entry name" value="Ribosomal_L27e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01107">
        <property type="entry name" value="RIBOSOMAL_L27E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="KOW" evidence="6">
        <location>
            <begin position="4"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="100"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="135" mass="15663" checksum="9538C3FE133D7D6B" modified="2014-02-19" version="1">MVKFLKPNKAVIVLQGRYAGRKGVIVRTFDDGTRERPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVNLDVLSSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CM18</accession>
    <name>V7CM18_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Mitochondrial carnitine/acylcarnitine carrier-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G142100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the mitochondrial carrier (TC 2.A.29) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CM18"/>
    <dbReference type="SMR" id="V7CM18"/>
    <dbReference type="STRING" id="3885.V7CM18"/>
    <dbReference type="Gramene" id="ESW30304">
        <property type="protein sequence ID" value="ESW30304"/>
        <property type="gene ID" value="PHAVU_002G142100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW30305">
        <property type="protein sequence ID" value="ESW30305"/>
        <property type="gene ID" value="PHAVU_002G142100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0758">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWAVGIP"/>
    <dbReference type="OrthoDB" id="14252at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031966">
        <property type="term" value="C:mitochondrial membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000064">
        <property type="term" value="F:L-ornithine transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990575">
        <property type="term" value="P:mitochondrial L-ornithine transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.40.10:FF:000050">
        <property type="entry name" value="mitochondrial carnitine/acylcarnitine carrier-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.40.10">
        <property type="entry name" value="Mitochondrial carrier domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023395">
        <property type="entry name" value="MCP_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018108">
        <property type="entry name" value="MCP_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050567">
        <property type="entry name" value="Mitochondrial_Carrier"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45624">
        <property type="entry name" value="MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45624:SF12">
        <property type="entry name" value="MITOCHONDRIAL ORNITHINE TRANSPORTER 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00153">
        <property type="entry name" value="Mito_carr"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103506">
        <property type="entry name" value="Mitochondrial carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50920">
        <property type="entry name" value="SOLCAR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="2"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="102"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="repeat" description="Solcar" evidence="9">
        <location>
            <begin position="208"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW30305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="297" mass="30802" checksum="20679D25A2CD7BA5" modified="2014-02-19" version="1">MGDVAKDLSAGTIGGVAQLVVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETLLRSHPGATLTVNQQVICGAGAGIAVSFLACPTELIKCRLQAQSTLAGTGTATMAVKYGGPMDVARQVLRSEGGIRGLFKGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSELDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQIDDYKNPKFSGSIDAFRRISASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMD6</accession>
    <name>V7CMD6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G226400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMD6"/>
    <dbReference type="SMR" id="V7CMD6"/>
    <dbReference type="STRING" id="3885.V7CMD6"/>
    <dbReference type="Gramene" id="ESW31294">
        <property type="protein sequence ID" value="ESW31294"/>
        <property type="gene ID" value="PHAVU_002G226400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1111">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHMNKVM"/>
    <dbReference type="OrthoDB" id="734129at2759"/>
    <dbReference type="UniPathway" id="UPA00196"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000506">
        <property type="term" value="C:glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017176">
        <property type="term" value="F:phosphatidylinositol N-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006506">
        <property type="term" value="P:GPI anchor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03796">
        <property type="entry name" value="GT4_PIG-A-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000188">
        <property type="entry name" value="Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039507">
        <property type="entry name" value="PIG-A/GPI3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45871">
        <property type="entry name" value="N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45871:SF1">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycosyltransferase subfamily 4-like N-terminal" evidence="3">
        <location>
            <begin position="23"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl transferase family 1" evidence="2">
        <location>
            <begin position="178"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW31294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="421" mass="47213" checksum="D72880C53DE26364" modified="2014-02-19" version="1">MMGDSPPQKHRVLMASDFYYPNFGGVENHVYYLSQCLLKLGHKVVVVTHAYGKRSGVRYMTGGLKVYYVPWRQFFNQIHGHQTFSTLCHDALLNARIMGYKVVFTDHSLHGFGDVGSIHMNKVMQFTLADVSQAICVSHTSKENTVLRSGLAPEKVFVIPNAVDTAMFKPALDRPSGSEIVIVIISRLVYRKGADLLVEVIPEVCRLHPNVRFIIGGDGPKRVRLEEMREKHSLFDRVDLLGAVPHTQVRSVLISGHIFLTCSLTEAFCMAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDIVQAIQTAISMLPKIDPQVMHNRLRELYNWHDVAKRTEIVYDRALKCPNQSLLECLSRYLSCGALAGKLFCLVMILSFLFWHLLELWQPADDIEEVPDVIFSKNCDEDFSQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMM0</accession>
    <name>V7CMM0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">22alpha-hydroxysteroid 23-monooxygenase</fullName>
            <ecNumber evidence="18">1.14.14.147</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="21">(22R,23R)-22,23-dihydroxy-campest-4-en-3-one synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="22">(22R,23R)-22,23-dihydroxycampesterol synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="19">6-deoxoteasterone synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="20">Teasterone synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="27" type="ORF">PHAVU_002G167400g</name>
    </gene>
    <organism evidence="27 28">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="28" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="28">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>(22S,24R)-22-hydroxy-5alpha-ergostan-3-one + reduced [NADPH--hemoprotein reductase] + O2 = 3-dehydro-6-deoxoteasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:27325"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:20710"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:59411"/>
            <dbReference type="EC" id="1.14.14.147"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>3-epi-6-deoxocathasterone + reduced [NADPH--hemoprotein reductase] + O2 = 6-deoxotyphasterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)</text>
            <dbReference type="Rhea" id="RHEA:27321"/>
            <dbReference type="Rhea" id="RHEA-COMP:11964"/>
            <dbReference type="Rhea" id="RHEA-COMP:11965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:20717"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:59410"/>
            <dbReference type="EC" id="1.14.14.147"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 24">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Hormone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="14">Plant hormone biosynthesis; brassinosteroid biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="17">Steroid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 25">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.147" evidence="18"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMM0"/>
    <dbReference type="SMR" id="V7CMM0"/>
    <dbReference type="STRING" id="3885.V7CMM0"/>
    <dbReference type="Gramene" id="ESW30608">
        <property type="protein sequence ID" value="ESW30608"/>
        <property type="gene ID" value="PHAVU_002G167400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0157">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TRDIEHT"/>
    <dbReference type="OrthoDB" id="3945418at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102097">
        <property type="term" value="F:22alpha-hydroxysteroid 23-monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016709">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016132">
        <property type="term" value="P:brassinosteroid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010268">
        <property type="term" value="P:brassinosteroid homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048366">
        <property type="term" value="P:leaf development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048441">
        <property type="term" value="P:petal development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048443">
        <property type="term" value="P:stamen development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016125">
        <property type="term" value="P:sterol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11043">
        <property type="entry name" value="CYP90-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000048">
        <property type="entry name" value="3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002403">
        <property type="entry name" value="Cyt_P450_E_grp-IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286:SF254">
        <property type="entry name" value="3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24286">
        <property type="entry name" value="CYTOCHROME P450 26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00465">
        <property type="entry name" value="EP450IV"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="23" id="KW-1069">Brassinosteroid biosynthesis</keyword>
    <keyword evidence="5 24 25" id="KW-0349">Heme</keyword>
    <keyword evidence="11 24 25" id="KW-0408">Iron</keyword>
    <keyword evidence="23" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="23" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13 26" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 24 25" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 25" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="10 25" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="28" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0752">Steroid biosynthesis</keyword>
    <keyword evidence="6 26" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 26" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="26">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="24">
        <location>
            <position position="437"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00037910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00050234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00051572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00060577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00066344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00075093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00076244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00078776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00083187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00084112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PIRSR" id="PIRSR602403-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="26">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="EMBL" id="ESW30608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="488" mass="55758" checksum="620C3F67D33A530A" modified="2014-02-19" version="1">MEWMIGVCVVMGMLVMSWWILLYGKKNDEKTVGKGKIPKGNSGWPLLGETLDFIASGYTSNPVTFLEKRKSLYGNVFKTCILGSNVIISTDQDVNKVVLQNHQANFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQFKARITRDIEHTVKQCFASWTPHQPIYVQDQLKRITFPVLVKVLMSVGPGEELDFLYREFAEFIKGLICLPLKFPGTRLYKSLQSKDRMVKMVRKIVEERKKLMRDNNGDEEGNAVNDVLDALLRDKGDSSSSAGLSPEMISQNIIEMMIPGEETLPTAMTMAIKFLTDSPLALSKLQEENMELKRLKTNCSEDYSWTEYMSLPFTQNVISETLRMANIVNGIWRKSVNDIEIKGYLIPKHWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGAVTGNNSFTPFGGGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKRKLPISLEPINA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN09</accession>
    <name>V7CN09_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">[fructose-bisphosphate aldolase]-lysine N-methyltransferase</fullName>
            <ecNumber evidence="9">2.1.1.259</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G169400g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>[fructose-bisphosphate aldolase]-L-lysine + 3 S-adenosyl-L-methionine = [fructose-bisphosphate aldolase]-N(6),N(6),N(6)-trimethyl-L-lysine + 3 S-adenosyl-L-homocysteine + 3 H(+)</text>
            <dbReference type="Rhea" id="RHEA:51000"/>
            <dbReference type="Rhea" id="RHEA-COMP:12861"/>
            <dbReference type="Rhea" id="RHEA-COMP:12862"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
            <dbReference type="EC" id="2.1.1.259"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the class V-like SAM-binding methyltransferase superfamily. Plant protein-lysine LSMT methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.259" evidence="9"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN09"/>
    <dbReference type="SMR" id="V7CN09"/>
    <dbReference type="STRING" id="3885.V7CN09"/>
    <dbReference type="Gramene" id="ESW30630">
        <property type="protein sequence ID" value="ESW30630"/>
        <property type="gene ID" value="PHAVU_002G169400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1337">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHIDGIF"/>
    <dbReference type="OrthoDB" id="441812at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030785">
        <property type="term" value="F:[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016279">
        <property type="term" value="F:protein-lysine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd19179">
        <property type="entry name" value="SET_RBCMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1410.10:FF:000005">
        <property type="entry name" value="Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1420.10:FF:000004">
        <property type="entry name" value="Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1420.10">
        <property type="entry name" value="Rubisco LSMT, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1410.10">
        <property type="entry name" value="set domain protein methyltransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011192">
        <property type="entry name" value="Rubisco_LSMT_MeTrfase_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015353">
        <property type="entry name" value="Rubisco_LSMT_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036464">
        <property type="entry name" value="Rubisco_LSMT_subst-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044431">
        <property type="entry name" value="SET_RBCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050600">
        <property type="entry name" value="SETD3_SETD6_MTase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271:SF113">
        <property type="entry name" value="[FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13271">
        <property type="entry name" value="UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09273">
        <property type="entry name" value="Rubis-subs-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009328">
        <property type="entry name" value="RMT_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81822">
        <property type="entry name" value="RuBisCo LSMT C-terminal, substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SET domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51583">
        <property type="entry name" value="SAM_MT127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="3 11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="SET" evidence="12">
        <location>
            <begin position="64"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="80"/>
            <end position="82"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="242"/>
            <end position="243"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="300"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00051577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR009328-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW30630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="54879" checksum="4941627D42D5FEE9" modified="2014-02-19" version="1">MASVFPACSGSASLFQGTNFFPFAAKGSPLHLKTPLSAKCVASLGTEISVPPAVDTFWQWLKEEGVVSRKTPVKPGMGPEGLGLVALKDISRNEVVLQVPKRLWINPDAVAASEIGKVCSGLKPWLAVVLFLIRERSKDDSLWKHYFSILPKETGSTIYWSEEELSELQGTQLLSTTLSVKEYVKSEFRRVEKEIILPNKKLFPSPITIDEFFWAFGILRSRAFSRLRNENLVVIPFADLINHSARVTTDDHAYEIKGAAGLFSWDYLFSLRSPLALKAGDQVYIQYDLNKSNAELALDYGFIEPNADRNAYTLTLQISESDPFFGDKLDIAESNGFGETAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVIRETCKTALAAYHTTIEEDQKLKAAKLDSRLAIAVGIREGEKQLLQQIDDIFKEKELELAELEYYQERRLKDLGLCGENGDILGDLGKFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNM5</accession>
    <name>V7CNM5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Methyltransferase type 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G197700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNM5"/>
    <dbReference type="STRING" id="3885.V7CNM5"/>
    <dbReference type="Gramene" id="ESW30968">
        <property type="protein sequence ID" value="ESW30968"/>
        <property type="gene ID" value="PHAVU_002G197700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RWPPGAK"/>
    <dbReference type="OrthoDB" id="2014981at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053223">
        <property type="entry name" value="Prob_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44067:SF5">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44067">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW30968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="375" mass="41587" checksum="670857C51BD998E9" modified="2014-02-19" version="1">MGFTFTTMTLNLLLLIAMVATNILSLYHLSSTLQSPKSPKPPPPVPDQLLHQLHTIRATINHLTRLQNTNPTKKSTIPSDLLLYSQLSPIASSCHNHPELLHKYMTYTPFSLCPSDSDLAESLILRGCHPLPRRRCFSQTPQKPISPNSLPQNPFPSSLPDNAVVWDHYTCKSFDCINRQNPNLGFDPSRDVSKFNSYKSDLDLPINQLFQIAKAAKSVLRLGLDVGGGTGSFAAAMKLRNVTVVTTTMNVAAPNSEAVALRGLVPLHVPLQQRLPLFDGVVDLVRCGRAVNRWIPMTVLEFLLFDVDRVLRGGGYLWVDHFFSKRVDLEKVYAPLIGKLGYKKVKWAMGNKTDAGGVKNGEVFLTALLQKPVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRQ0</accession>
    <name>V7CRQ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Inositol polyphosphate-related phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G017200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the inositol polyphosphate 5-phosphatase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRQ0"/>
    <dbReference type="SMR" id="V7CRQ0"/>
    <dbReference type="STRING" id="3885.V7CRQ0"/>
    <dbReference type="Gramene" id="ESW32789">
        <property type="protein sequence ID" value="ESW32789"/>
        <property type="gene ID" value="PHAVU_001G017200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0565">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSECQHI"/>
    <dbReference type="OrthoDB" id="405996at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034485">
        <property type="term" value="F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043813">
        <property type="term" value="F:phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004439">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046856">
        <property type="term" value="P:phosphatidylinositol dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009753">
        <property type="term" value="P:response to jasmonic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009651">
        <property type="term" value="P:response to salt stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.10.10:FF:000044">
        <property type="entry name" value="Type IV inositol polyphosphate 5-phosphatase 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="entry name" value="Endonuclease/exonuclease/phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046985">
        <property type="entry name" value="IP5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000300">
        <property type="entry name" value="IPPc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200">
        <property type="entry name" value="INOSITOL 5-PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11200:SF275">
        <property type="entry name" value="LD06095P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22669">
        <property type="entry name" value="Exo_endo_phos2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00128">
        <property type="entry name" value="IPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="DNase I-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Inositol polyphosphate-related phosphatase" evidence="3">
        <location>
            <begin position="47"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="346" mass="39097" checksum="AB4ABD5A7ABE5AAE" modified="2014-02-19" version="1">MGNQLCKGRKSRSKRRPMGFIHNQASPSHTGIRTVGVEKVCNFSTDSDLCISIVTWNMNGQVTFEDLAEMVGSNREFDLLAVGLQEAPPCQRNKVATMLSAALDESHTLIGKVIMQSLQLYLFGPKDAKSFINELKVDKESFGGCGGIIGRKKGAVAIRINYKGIRMVFISCHLSAHERNVEERNSQCRHISHTLFSKFWNPYARPSHIAIWLGDLNYRLQGIHTHPARTLIDQATKRLHNKDQLLQEARRGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSHKVRVPAWTDRILYKIEDEKKMEATLHSYESIDKINGSDHKPVKAHLCLRLSQIPTKPTSSQTIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS42</accession>
    <name>V7CS42_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Methyltransferase type 11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G031800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS42"/>
    <dbReference type="STRING" id="3885.V7CS42"/>
    <dbReference type="Gramene" id="ESW32954">
        <property type="protein sequence ID" value="ESW32954"/>
        <property type="gene ID" value="PHAVU_001G031800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR9D">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MMSRRPI"/>
    <dbReference type="OrthoDB" id="745247at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045488">
        <property type="term" value="P:pectin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044689">
        <property type="entry name" value="CGR2/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34208:SF15">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34208">
        <property type="entry name" value="S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="258" mass="28743" checksum="59B2BC0BA5281BF2" modified="2014-02-19" version="1">MSRRPVNSSRRFGDSGGGLFSSKSRSPPVLSIALVVLGGLFVVGYFYRGSGGFGSRLDSVSRIEGDYLCSAEVQQSIPILKKAYGDSMHKVLHVGPDTCYVVSKLLKEEETEAWGIEPYDIEEADSSCKALIRRSSVRVSDIKFPLPYRPKSFSLVIVSDALDYLSPRYLNKTLPELVRVSSDGVVIFTGFPTTQKAKVADVSKFGRAAKMRSSSWWVKFFLQINLEENEDASKKFEQASTMSSYIPRCQIFHLKSLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUD5</accession>
    <name>V7CUD5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G328700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUD5"/>
    <dbReference type="SMR" id="V7CUD5"/>
    <dbReference type="STRING" id="3885.V7CUD5"/>
    <dbReference type="Gramene" id="ESW32515">
        <property type="protein sequence ID" value="ESW32515"/>
        <property type="gene ID" value="PHAVU_002G328700g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32516">
        <property type="protein sequence ID" value="ESW32516"/>
        <property type="gene ID" value="PHAVU_002G328700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR2Y">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SYENHAG"/>
    <dbReference type="OrthoDB" id="2020306at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000001">
        <property type="entry name" value="NAC domain-containing protein 73"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044799">
        <property type="entry name" value="SOG1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31079:SF20">
        <property type="entry name" value="NAC DOMAIN-CONTAINING PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31079">
        <property type="entry name" value="NAC DOMAIN-CONTAINING PROTEIN 73"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC" evidence="7">
        <location>
            <begin position="63"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW32516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="307" mass="34817" checksum="F091AF2792B6695A" modified="2014-02-19" version="1">MTWCNDSDEERGIELLAPTLTPTTNNTLLTDTKPSENRTITCPSCGHNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVLCDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSITKQDLYQSVDDEDIIPRSGTLMEYYNPSFINYDHVGGRNNREASPQLIPNLVMQADTSSFIRLAMDATKARLDTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWD9</accession>
    <name>V7CWD9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">peptidylprolyl isomerase</fullName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G053000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWD9"/>
    <dbReference type="SMR" id="V7CWD9"/>
    <dbReference type="STRING" id="3885.V7CWD9"/>
    <dbReference type="Gramene" id="ESW33226">
        <property type="protein sequence ID" value="ESW33226"/>
        <property type="gene ID" value="PHAVU_001G053000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQNQFNR"/>
    <dbReference type="OrthoDB" id="1166594at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016018">
        <property type="term" value="F:cyclosporin A binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.100.10:FF:000022">
        <property type="entry name" value="Peptidyl-prolyl cis-trans isomerase CYP95"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11071:SF561">
        <property type="entry name" value="PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="Cyclophilin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="7">
        <location>
            <begin position="10"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="176"/>
            <end position="895"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="188"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="202"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="219"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="243"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="257"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="295"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="308"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="321"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="367"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="428"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="439"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="473"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="530"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="540"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="568"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="589"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="637"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="671"/>
            <end position="692"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="704"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="777"/>
            <end position="801"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="809"/>
            <end position="825"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="6">
        <location>
            <begin position="868"/>
            <end position="877"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW33226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="895" mass="101330" checksum="088AE1EBCAF74C4F" modified="2014-02-19" version="1">MAKKKNCLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPSTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDSLGSHFIITFKSDPHLDRKHVIFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKGRDGSTETHSPELHRGKRKKSSGDKRKRRKYYSSVSNSSSDSDTKSSESDSDSDSDTSSSYTSSSSDDRRRKRKRSRKDKHRRGKKRDQHRDKRRRKQDKRSKRKSRRELTCHTESDSDNKSGNSSGGESCDAQAKDQKHKDHSLKHAEGQSSLVVEKELPAVLLSKGEKLDMLEEEEFPKENGERRSNGNEANYRSERSEGRQPDVMDDQPGKSRSQSMSISPKRESRSTSISRKKRLSRSPSRSRSPRAPLRRSLSRSPNRRSISRSPARGRKGKSVSRSPMQSRGYRSVSVSPVRSLSRSNLRTSPRAPSRRSISRSPVINHNHRSVSRSPIRSRDHRNVSVSPATSLSRSHKSSPRARSQRSISRSPVRTHNHRSVNRSPVRSSGRRSVSASPVRPLSRSRRRNSPRAPSRRSISRSPVKTGNASRSPVRSHGHRSVSASPVRSLSRGRWRNSPRAQSRKSISRSPVRVSRKSLSRSPVRTSARSLSRSLSRSSGRVPLRSISRSPARVPSRGNRRSYSRSPRGRSRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRRRRSRTPSVSRSPRYRGRRYSRSRSRSPVRSRSPVGAYRPRVEKSRSLSRSRSLSRSRASVESQSPKKASRNSRSASPSESPDAKKGLVSYEDGSPYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CY37</accession>
    <name>V7CY37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">60S ribosomal protein L21-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G200900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic ribosomal protein eL21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CY37"/>
    <dbReference type="SMR" id="V7CY37"/>
    <dbReference type="STRING" id="3885.V7CY37"/>
    <dbReference type="Gramene" id="ESW35034">
        <property type="protein sequence ID" value="ESW35034"/>
        <property type="gene ID" value="PHAVU_001G200900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1732">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HVQASRC"/>
    <dbReference type="OrthoDB" id="1338052at2759"/>
    <dbReference type="PhylomeDB" id="V7CY37"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.30.70:FF:000001">
        <property type="entry name" value="60S ribosomal protein L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="6.10.250.3260:FF:000002">
        <property type="entry name" value="60S ribosomal protein L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.70">
        <property type="entry name" value="Ribosomal protein L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001147">
        <property type="entry name" value="Ribosomal_eL21"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018259">
        <property type="entry name" value="Ribosomal_eL21_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036948">
        <property type="entry name" value="Ribosomal_eL21_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20981">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01157">
        <property type="entry name" value="Ribosomal_L21e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="Translation proteins SH3-like domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01171">
        <property type="entry name" value="RIBOSOMAL_L21E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="118"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="164" mass="18663" checksum="5CE915932F1542AF" modified="2014-02-19" version="1">MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEKISTKRQPKGPKPGFMVEGATLETVTPIPYDVVNDLKGGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7D066</accession>
    <name>V7D066_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HORMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G261700g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D066"/>
    <dbReference type="STRING" id="3885.V7D066"/>
    <dbReference type="Gramene" id="ESW35754">
        <property type="protein sequence ID" value="ESW35754"/>
        <property type="gene ID" value="PHAVU_001G261700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4652">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1928087at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000228">
        <property type="term" value="C:nuclear chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007129">
        <property type="term" value="P:homologous chromosome pairing at meiosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.900.10:FF:000009">
        <property type="entry name" value="Meiosis-specific protein ASY2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.900.10">
        <property type="entry name" value="HORMA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003511">
        <property type="entry name" value="HORMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036570">
        <property type="entry name" value="HORMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051294">
        <property type="entry name" value="HORMA_MeioticProgression"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48225">
        <property type="entry name" value="HORMA DOMAIN-CONTAINING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48225:SF7">
        <property type="entry name" value="MEIOSIS-SPECIFIC PROTEIN HOP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02301">
        <property type="entry name" value="HORMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56019">
        <property type="entry name" value="The spindle assembly checkpoint protein mad2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50815">
        <property type="entry name" value="HORMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0469">Meiosis</keyword>
    <keyword evidence="4" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HORMA" evidence="7">
        <location>
            <begin position="15"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="518"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="290"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="518"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW35754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="606" mass="68999" checksum="323829B6F20D4162" modified="2014-02-19" version="1">MVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPLDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFCYSDSDNQEVSMNINRTGNKKNRGGFKCNSTAEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTGEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIPDDMSNGDDSMQQNEYYDTDSEVDLTQGNRYVVAPIDKQQQQEDNSMIDEDNTQDPVEDEQQQVRVKEWINCCHRDTIELTDVLSNFPDISVIMDKLVEEGVLSKIGKESYAINKDKNLEYEFTIVKEEIDGQLPKVFDRALQLEDRLYMKALYHALPMTHVSMGKLQILLEGEVNQTAARKIIDKMVRDGFVEPKGNKRLGKRVIHSELTERKFIEVQKALSATEAMDVDHCEPNSKSKLTGFRLNGNNHDVSTCGVLHSIGSDLTRMKVTSETNYTDSGNGQNPTKAKEPGNTPISRPVISRESFAVGKENDRTNGIANQGDEGDTIICSKSSQEKRSRKTSAVKEPIHQNIKRQKSEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7D145</accession>
    <name>V7D145_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Heme-binding-like protein At3g10130, chloroplastic</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G190400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HEBP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D145"/>
    <dbReference type="SMR" id="V7D145"/>
    <dbReference type="STRING" id="3885.V7D145"/>
    <dbReference type="Gramene" id="ESW34900">
        <property type="protein sequence ID" value="ESW34900"/>
        <property type="gene ID" value="PHAVU_001G190400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW34901">
        <property type="protein sequence ID" value="ESW34901"/>
        <property type="gene ID" value="PHAVU_001G190400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ0B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEDQDKW"/>
    <dbReference type="OrthoDB" id="6424451at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010287">
        <property type="term" value="C:plastoglobule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="entry name" value="Regulatory factor, effector binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006917">
        <property type="entry name" value="SOUL_heme-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11220">
        <property type="entry name" value="HEME-BINDING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11220:SF54">
        <property type="entry name" value="OS02G0533200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04832">
        <property type="entry name" value="SOUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="Probable bacterial effector-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="298" mass="33750" checksum="D305F41B6670321E" modified="2014-02-19" version="1">MFPVCNLSPLSLQPVRVVPIPGKPTRHSSFLSVTNSGERISTRKSNISPFESRISLVFALASQANSLSQRLLTDVAAETAKYLFPKRFESRNLEEALMSVPDLETVVFKVLSRRDQYEIREVEPYFVAEATMPGKRGFDFNGASQSFNVLAEYLFGKNTKNEKMEMTTPVFTSKNQSEGVKMDMTTPVLTTKIGDQDKWRMSFVMPSKYGANLPLPKDSSVTIKEVPRKIVAVVSFSGFVNDEQIKQRELKLREALKSDSQFKIKEGTSIEVAQYNPPFTLPFQRRNEIALEVEWNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1L3</accession>
    <name>V7D1L3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">S1 motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G245600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2-alpha family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1L3"/>
    <dbReference type="SMR" id="V7D1L3"/>
    <dbReference type="STRING" id="3885.V7D1L3"/>
    <dbReference type="Gramene" id="ESW35568">
        <property type="protein sequence ID" value="ESW35568"/>
        <property type="gene ID" value="PHAVU_001G245600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2916">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNNTEAL"/>
    <dbReference type="OrthoDB" id="1685042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033290">
        <property type="term" value="C:eukaryotic 48S preinitiation complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005850">
        <property type="term" value="C:eukaryotic translation initiation factor 2 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04452">
        <property type="entry name" value="S1_IF2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.1130:FF:000001">
        <property type="entry name" value="Eukaryotic translation initiation factor 2 subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.150.190:FF:000003">
        <property type="entry name" value="Eukaryotic translation initiation factor 2 subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.50.140:FF:000015">
        <property type="entry name" value="Eukaryotic translation initiation factor 2 subunit alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1130">
        <property type="entry name" value="EIF_2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.190">
        <property type="entry name" value="Translation initiation factor 2, subunit 1, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044126">
        <property type="entry name" value="S1_IF2_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024055">
        <property type="entry name" value="TIF2_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024054">
        <property type="entry name" value="TIF2_asu_middle_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011488">
        <property type="entry name" value="TIF_2_asu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10602">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10602:SF0">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07541">
        <property type="entry name" value="EIF_2_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110993">
        <property type="entry name" value="eIF-2-alpha, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116742">
        <property type="entry name" value="eIF2alpha middle domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="18"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="305"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="311"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW35568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="340" mass="38480" checksum="822BD9C86D404F31" modified="2014-02-19" version="1">MGPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLSIDLEDLYIHIAWPLYRKYGHAFEAFKIIVTDPDSVLNTLTREVKEVGPDGQEVTKVVPAVSEEVKDSLVKNIKRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRRAEASGNDDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNNAITSCTQAIEQHKGKLVVKEAARAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVDNGSGITE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2D6</accession>
    <name>V7D2D6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G253600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2D6"/>
    <dbReference type="SMR" id="V7D2D6"/>
    <dbReference type="STRING" id="3885.V7D2D6"/>
    <dbReference type="Gramene" id="ESW35660">
        <property type="protein sequence ID" value="ESW35660"/>
        <property type="gene ID" value="PHAVU_001G253600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSRG">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NHKVRDI"/>
    <dbReference type="OrthoDB" id="774313at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35164">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35164:SF9">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="445"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="500"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="7"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="79"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="205"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="346"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="445"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="476"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="511"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="548"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="591"/>
            <end position="604"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="605"/>
            <end position="615"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW35660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="615" mass="71857" checksum="7685E5A0EFE56039" modified="2014-02-19" version="1">MQKQYYMKQYDKKMKQTGEQMRKVEQERDQAFDELRHMKRIAQETNVMIDETLANKRSNSESLLLENQKSVQESPNNKLSEKDVLLDNMRNEMNNLRSSEDNAMTLLSGYKRRIQELEIELNKTKESEANLFDTLVMQTKQLEQNKILLEESKLEITSLEEKLMTEQLSACQTFQIPEIQNNFPSMQTGDKMKVEAELEKEMFNSEELSEKVKIMLEELVTLKSELKLATEAEENSKKAMDDLAFALKEVATEANQVKAKLTLSQVELEHTKEDAERWRIMLGTTEERYKDILELTRKESDKNKNTVERLRSEAEESLLAWNVKEIELVNCIKRAEEERLHAKHESTEALEALKEVENKVKVSKEENQKLRDILKQALNEANVAKEGAEIAKAENARLQDSINLLVHENEMLKIHEVASFENIKELKRMLSESSIKDLKNEDIDKLSGKESGKEDNNNSNFRETGRRARTHSNFSMDHREHKESKSLNKTFSLNLKEMITPHSHKQQHNKITNEELNKDTNKDSKDTKDTGDDTLRGSIFDEIDSSDSESRQDMDIPDDFDHLDESHFDDPEGDRNSRKRRALLRRFGNLIRRRGYHNHNHNHRKEPSNEEHLQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0T0</accession>
    <name>A0ACC3P0T0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001652</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967853">
        <property type="protein sequence ID" value="KAK6645749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="912" mass="104840" checksum="0CC366F70F3380F2" modified="2026-01-28" version="1">MNLLHGSKVWVEDRDSAWLPAEVLDSDGNKILLLTDSGKKLFASKEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYELNDIYTYTGSILIAVNPFTKLPHLYDSHMMDEYKGIPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSFERDAEKYKLGHPSHFHYLNQSKVYELDGVRNSEEYLKTRRAMDIVGISHADQESIFRVLAAILHVGNIEFSPGKEHDSSAVKNDKSRFHLQMAADLFMCDVDLLLATLCTRSIQTREGSIIKVLDCNAAVAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLELIEKKPIGIIALLDEACMFPKSTPETFSTKLFQHFRSHPRLGKEKFSQTDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFITRQYFTILRSAAFSLQACCRGHIARKIYAAKRETAAAISIQKYIRMWLTRHAHLKLNFSAITIQSHVRGFVTRQRFLHVKEHRAATFVQAFWRMSKARSSFLRHQTSIVAIQCLWRCKQAKKELRRLSKLFRKFYILSLLYFYFVSQLYLTINIRIMYLETIPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P121</accession>
    <name>A0ACC3P121_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001844</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967758">
        <property type="protein sequence ID" value="KAK6646000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="311" mass="34420" checksum="89F743351A715AFB" modified="2026-01-28" version="1">MHSFRDKVTQKLSHLFPNSSSPQDSPYSQEDKPVSSYLSYIIPSISFDGSKTSKYQNENKSPSAGYNYGNFDYQDVPSDSYVDCPMDLVKDCNDNNSNNNNNEDPTFRKSSSSSEVFEEANEQQTPNTSKKSRLNLSDDSTFISPALYEFLEICLPNIVKGRQWVLLYSTLKHGVSLRTLIRKSAELSCPGLLIVGDMKGAVFGGLLECPLKPTAKRKYQGTNETFVFTTVYGQPRLFLPTGVNRYYCMCVNDLLALGGGGSYALSLEEDLLSGTSGPSETFGNSCLAHSPEFQLKNVELWGFAHASPFQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1D2</accession>
    <name>A0ACC3P1D2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L006001</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967756">
        <property type="protein sequence ID" value="KAK6646177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="810" mass="90211" checksum="AEF75664413A9DA5" modified="2026-01-28" version="1">MPIKMPLTLRNKLKTLCSSVHAWSYAIFWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLLGQGIVGEAAFTGKHSWVHSDGQTHYWNLSGQDICEDDSCLLQQFCSGIKTIVVIPVKALGVIQFGSRNKILERVEFLEQTQSMLTEIDDDDMGMFDMSENAVLPLLYQSNDLNGMLASVSSASPNDPFPTHYKNYEDAVASFQGDSSYLGDQLKGTMEAQVVLSERNSTDVLLKPNTSTDNLIAKTPYLGVCDGELSSFDLLEQQLVSSVRAQDVADACFTNENVFATCKLPVQDSTLVPLCSTDGGSFQGKLQYSNQSSVVTDVEFSSSSHALHGHSENIEPVDMSEEILKFSSMDDLCHWFGPSSEDSICKAVMTLDNTFSESREFNPTSFDLVGSSTLNDVLLTGLAVYNSNSDGNETSVVMHNAEKGTLDVMETDFSYDQADEWWRNTLTPVVSGVTDTGFSECISQLNSDTLPGTRKRLFSQLGIEELLRSGANYNPINSSVFECWLSPNKRQTVESSSVNGSTIHFTNLDRSGTRSDLMQPLCDLGSTNNLPSKKDTFSKLQATTLVDDSHSINVGKAVPQHPQKPEEQAKPTNKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYTDKLQEPSEPKLIEQENEVVLKDSGVADSKNCGITWAYEVGHETMLCPIIVEDMSPPGQMLIEMLCEVQGIFLEIIDIIRGFGLNILKAKMERKKNKLWARFIVEANRHVTRIDVFWSLVHLLQQTNTSGIDSSNKHWDALHANSLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1Q5</accession>
    <name>A0ACC3P1Q5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001739</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967825">
        <property type="protein sequence ID" value="KAK6645771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="496" mass="54074" checksum="F2941B8003971E38" modified="2026-01-28" version="1">MAEDGGGFSDHRHNKAVVMRFSLGGRFWHLRKLTKNGNIEKGREKHCDNDDESNSGSATAYEALDVGELIIYTRQVTSKRKQPSSGCGIVIGSSHASKKGLAATPSPTRRGKGKIQIGVEGILMRATDELQALQEERKKVAPETAGAIDQFLVKLRACATGESCITFILDDPVGNSFIENPEEIITIEAKAEGTHVDAPGGGEAVTTDQVRREPHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAASYIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKEDMLSRFVPLSTPHFEKFSKKEMDDKENRVHGILTKCIVTRRLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEDYERSWEQNEELGLNDMDTSSAEVGDAPTNTSKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHH9</accession>
    <name>V7AHH9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Carboxypeptidase</fullName>
            <ecNumber evidence="11">3.4.16.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_011G084700g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Probable carboxypeptidase.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the peptidase S10 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.-" evidence="11"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHH9"/>
    <dbReference type="SMR" id="V7AHH9"/>
    <dbReference type="STRING" id="3885.V7AHH9"/>
    <dbReference type="Gramene" id="ESW04313">
        <property type="protein sequence ID" value="ESW04313"/>
        <property type="gene ID" value="PHAVU_011G084700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHGPCNV"/>
    <dbReference type="OrthoDB" id="443318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004185">
        <property type="term" value="F:serine-type carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000060">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001563">
        <property type="entry name" value="Peptidase_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033124">
        <property type="entry name" value="Ser_caboxypep_his_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018202">
        <property type="entry name" value="Ser_caboxypep_ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802:SF350">
        <property type="entry name" value="CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802">
        <property type="entry name" value="SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00450">
        <property type="entry name" value="Peptidase_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00724">
        <property type="entry name" value="CRBOXYPTASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00560">
        <property type="entry name" value="CARBOXYPEPT_SER_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00131">
        <property type="entry name" value="CARBOXYPEPT_SER_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11" id="KW-0645">Protease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 11" id="KW-0732">Signal</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148911" description="Carboxypeptidase" evidence="11">
        <location>
            <begin position="28"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="508"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00037399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW04313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="527" mass="58987" checksum="774D817189F45966" modified="2014-02-19" version="1">MALSSSPSLSKLSLLLFFFLSLSSSYATFDPSHHPAYLPQSHAERLIRSLNVFPKDSVNITKGDHGGFVPGMIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITNNLSLTWNHYGWDQASNIIFVDQPTGTGFSYSSDDSDIRHDETGVSIDLYDFLQEFFKTHLDFVKNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQFQAYPDFALDNRIITKAQYDNVTMLIPHCEQAIKTCEAQGGNSCIRAVDICENIFDRILDFIDNINYYDIRKKCEGDLCYNFTQVETLLNMQKVKSALGVMDDLKYELCSLEVRVAMMQDWMRNLEVVIPSLLEDGIKLLVYVGEEDLICNWLGNSRWVQAMEWSGQKAFGISPTGKFVVDGAEAGSLNSYGPLTFLKVHGAGHMVPMDQPKAALQMLTSWTGGKLNASSSPSFSHQLRSRPLIIFFILFLYCTITSQMLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHM0</accession>
    <name>V7AHM0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G024300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHM0"/>
    <dbReference type="SMR" id="V7AHM0"/>
    <dbReference type="STRING" id="3885.V7AHM0"/>
    <dbReference type="Gramene" id="ESW03566">
        <property type="protein sequence ID" value="ESW03566"/>
        <property type="gene ID" value="PHAVU_011G024300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1404">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YQNFPKT"/>
    <dbReference type="OrthoDB" id="425114at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004015">
        <property type="term" value="F:adenosylmethionine-8-amino-7-oxononanoate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009102">
        <property type="term" value="P:biotin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009448">
        <property type="term" value="P:gamma-aminobutyric acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000014">
        <property type="entry name" value="Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049704">
        <property type="entry name" value="Aminotrans_3_PPA_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF004767">
        <property type="entry name" value="PRK06105.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42684">
        <property type="entry name" value="ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42684:SF3">
        <property type="entry name" value="ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW03566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="513" mass="56575" checksum="E1382C77025F0CF4" modified="2014-02-19" version="1">MNTLLRSTLRTKNASSLAYAAVSRSVQENLLQSRLWSRSNSTEASLAKDDSANEGKNGPGFKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDTNGKKYLDALAGLWATALGGSESRLVDAAMAQFKKLPFYHSFWNRTTLPSLELAKELLEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRHHLPGETEEEFSTRLANNLEQLILKEGPDTIAAFIAEPVMGAGGVIPPPSTYFEKVQAVVKKYDILFIADEVICAFGRVGTMFGCDKYNIKPDLVSLAKALSSSYLPIGAVLVSPEIAEVIHTQSNKLGAFSHGFTYSGHPVSCAVAIEALKIYKERNIVDQVNKISPRFQEGLKAYSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGARCQKFGMLVRVAGDNIMMSPPYIISPEEVDTLIRIYGEALKETEKRVQELKSQRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHW5</accession>
    <name>V7AHW5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G097100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHW5"/>
    <dbReference type="SMR" id="V7AHW5"/>
    <dbReference type="STRING" id="3885.V7AHW5"/>
    <dbReference type="Gramene" id="ESW04468">
        <property type="protein sequence ID" value="ESW04468"/>
        <property type="gene ID" value="PHAVU_011G097100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NVNMAGF"/>
    <dbReference type="OrthoDB" id="294295at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05326">
        <property type="entry name" value="secoisolariciresinol-DH_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045309">
        <property type="entry name" value="ABA2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005559">
        <property type="entry name" value="PRK07231.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43180">
        <property type="entry name" value="3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43180:SF30">
        <property type="entry name" value="MOMILACTONE A SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="268" mass="28290" checksum="01E5CDFBFE5AA90D" modified="2014-02-19" version="1">MAHVSVVSAAVKRLEGKVAIITGGASGIGEATARLFSEHGAHVVIADIQDDLGLSLCNELESAVYVHCDVTKEEDVEKCVNVAVSKYGKLDIVLNNAGTCDEFKRSIVENSKCDFERVINVNLVGPFLGTKHAARVMIPAKRGCIINTSSVAGCIGGGAPHAYTISKHGLVGLTKNTAVELGQFGIRVNCVSPYVVATPLLNKYFNLDEEGVREAYSNLKGSYLVPNDVAEAALYLAGDESKFVSGHNLVIDGGFTTTNAGFSVGRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJP5</accession>
    <name>V7AJP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Receptor-like serine/threonine-protein kinase</fullName>
            <ecNumber evidence="15">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_011G150100g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="15"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJP5"/>
    <dbReference type="SMR" id="V7AJP5"/>
    <dbReference type="Gramene" id="ESW05078">
        <property type="protein sequence ID" value="ESW05078"/>
        <property type="gene ID" value="PHAVU_011G150100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSMT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNENEIY"/>
    <dbReference type="OrthoDB" id="785331at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01098">
        <property type="entry name" value="PAN_AP_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:002239">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000004">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000195">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.4.10:FF:000002">
        <property type="entry name" value="G-type lectin S-receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.4.10">
        <property type="entry name" value="Hepatocyte Growth Factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024171">
        <property type="entry name" value="SRK-like_kinase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF1069">
        <property type="entry name" value="NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08276">
        <property type="entry name" value="PAN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000641">
        <property type="entry name" value="SRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00473">
        <property type="entry name" value="PAN_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="16" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-0675">Receptor</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 15" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Bulb-type lectin" evidence="19">
        <location>
            <begin position="11"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="18">
        <location>
            <begin position="272"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="20">
        <location>
            <begin position="328"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="17">
        <location>
            <begin position="453"/>
            <end position="731"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR000641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW05078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="772" mass="86490" checksum="87911FE27A500D2D" modified="2014-02-19" version="1">MTTTSTAALDSLAVSQSIQDGKNETLVSAGGITELGFFSPGNSARRYLGIWFRNVSPLTIVWVANRNTPLENNSGVFKLNEEGILQLLNATNSSIWSTSSNVSSKAGNNPIARLMDSGNLVVRNAQETNEEDVLWQSFDHPCDTYLPGMKLGWNLETSLETFISSSVSDTDPAVGEYTIEVSLRGYPQVMNFKEGVLVARAGSWNGLSLVGNPGPTLETSPKLVISEKEVYYEYELLDQSAFFVYILTPSGTGKSLYWTTETRTAHVVSTGEQDQCEDYAFCGNNSICSYDGNHPSCECLRGYVPKSPEQWNISVWRNGCVPKNKSTCENSHTDGFIKYTYMKLPDTSSSSFNTTMNLNECHNSCLGNCSCTAYANLDVRGGGSGCLLWLDNLVDMRSFSQWGQDFYVRVPASELGAARRIFNRHYRNIVPRKEEIDLPTFDMSVLVNATENFSTRNKLGEGGFGPVYKGTLIDGKEIAVKRLSNKSEQGLDEFKNEVALISKLQHRNLVKLFGCCIEGEENMLIYEYMSNKSLDYFVFDETKRKLLDWHKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNILLDENLHPKISDFGLARSLLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVFSYGVIVLEIISGKRNSEFLDPWQDNNLLGYAWRLWTEDRALKLLDEVLEELYCVPFQVIRCIEVGLLCVQQRPEDRPDMSSVVLMLNGEKLLRKQKAPGFYTEVDVTSHANSSSAILKPNSHNQLSITMLDAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKK6</accession>
    <name>V7AKK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">RALF-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G021500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant rapid alkalinization factor (RALF) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKK6"/>
    <dbReference type="Gramene" id="ESW06122">
        <property type="protein sequence ID" value="ESW06122"/>
        <property type="gene ID" value="PHAVU_010G021500g"/>
    </dbReference>
    <dbReference type="OMA" id="MKNTETH"/>
    <dbReference type="OrthoDB" id="1044402at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005179">
        <property type="term" value="F:hormone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0040008">
        <property type="term" value="P:regulation of growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008801">
        <property type="entry name" value="RALF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34270:SF5">
        <property type="entry name" value="PROTEIN RALF-LIKE 10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34270">
        <property type="entry name" value="PROTEIN RALF-LIKE 15-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05498">
        <property type="entry name" value="RALF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0372">Hormone</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753837" description="RALF-like protein" evidence="8">
        <location>
            <begin position="27"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="76" mass="8687" checksum="E561E2B2DE751C7B" modified="2014-02-19" version="1">MGEKKCSMKVWFLCFLVLSMVALGHGNVEDEVENTETKGVTERRLSDDKTLSQPVNEYNRGCNAIHRCRGKHHHNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKV9</accession>
    <name>V7AKV9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Knottin scorpion toxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G185900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW05513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="gene ID" value="PHAVU_011G185900g"/>
    </dbReference>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753495" description="Knottin scorpion toxin-like domain-containing protein" evidence="1">
        <location>
            <begin position="20"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="72" mass="8154" checksum="CB3CCA423C5F9DA2" modified="2014-02-19" version="1">MKIAFSLLLILLLSIGIENEGPIKVTEAKICDVKLYDYCDEDCYNDCPKIFGARAIGFCNFNPQVCICRRQC</sequence>
</entry>
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        <name evidence="8" type="ORF">PHAVU_010G097600g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
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            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the mitochondrion-specific ribosomal protein mS33 family.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW07045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7AP07"/>
    <dbReference type="STRING" id="3885.V7AP07"/>
    <dbReference type="Gramene" id="ESW07045">
        <property type="protein sequence ID" value="ESW07045"/>
        <property type="gene ID" value="PHAVU_010G097600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4844">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WYPHDIN"/>
    <dbReference type="OrthoDB" id="6495301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990904">
        <property type="term" value="C:ribonucleoprotein complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="Ribosomal_mS33"/>
    </dbReference>
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        <property type="entry name" value="MITOCHONDRIAL RIBOSOMAL PROTEIN S33"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN MS33"/>
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    </dbReference>
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        </location>
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        <source>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00035132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="ESW07045.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="11338" checksum="26740D77E55F08F4" modified="2014-02-19" version="1">MSLKKMLTAAINQGVPEARARIFGHQLNPSGQKSPHKVLRMKLFGEKVAQWYPHDINKDDPLVMARQEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK</sequence>
</entry>
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    <accession>V7APD8</accession>
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            <fullName evidence="2">Uncharacterized protein</fullName>
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    </protein>
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        <name evidence="2" type="ORF">PHAVU_010G106800g</name>
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            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
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    </reference>
    <dbReference type="EMBL" id="CM002297">
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        <property type="molecule type" value="Genomic_DNA"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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            <end position="25"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
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            <end position="93"/>
        </location>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
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    </evidence>
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        <source>
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    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
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    </evidence>
    <sequence length="146" mass="16721" checksum="B2BE7EAAF84686FE" modified="2014-02-19" version="1">MPIETNPLDALVAFIFFVLLPFLQLRYPENPSPFHLHPKTIWLSILSFLLYCFFTFSSNLNFGIKVNHFQTLKRVFGSLSLLCLLVLLLPRHLGMLRFPYLHFMVHDLVHHSCAPRHQNSLHGSKGTTSIYEEGGASTLTNHFNGL</sequence>
</entry>
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        <name type="common">Kidney bean</name>
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    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
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            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APU5"/>
    <dbReference type="SMR" id="V7APU5"/>
    <dbReference type="STRING" id="3885.V7APU5"/>
    <dbReference type="Gramene" id="ESW07662">
        <property type="protein sequence ID" value="ESW07662"/>
        <property type="gene ID" value="PHAVU_010G148300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1176">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IYEYYGM"/>
    <dbReference type="OrthoDB" id="2962993at2759"/>
    <dbReference type="PhylomeDB" id="V7APU5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090409">
        <property type="term" value="F:malonyl-CoA synthetase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031956">
        <property type="term" value="F:medium-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090410">
        <property type="term" value="P:malonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd05941">
        <property type="entry name" value="MCS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.12780:FF:000030">
        <property type="entry name" value="Acyl-CoA synthetase family member 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43201">
        <property type="entry name" value="ACYL-COA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43201:SF8">
        <property type="entry name" value="ACYL-COA SYNTHETASE FAMILY MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="3">
        <location>
            <begin position="78"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding enzyme C-terminal" evidence="4">
        <location>
            <begin position="510"/>
            <end position="595"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW07662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="609" mass="67029" checksum="8A7D43B55FAA53EB" modified="2014-02-19" version="1">MSRSLKAFNKHLSLLPLPLHLRNFSTHPFITSSSFPLFPHHVSFPRFSFSKLHPLSSSAPATLMEVVKAIAKQEPTAHENVAIRADQKSYSYKELISSAQKISNLLCASDAQTGSLGGARIGIVAKPSAEFVAGIIGIWLSGGVAVPLATSYPEVELLYVIDNSDISAILSTEEHSELMQTVANKSSSQFFHLPSVVNTSSEKSRDERQQNGKIHADRILLDNIIGGSGEEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLAKAWEYTAADKFLHCLPLHHVHGFFNGLMAPLYTGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQHVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEENENDYNNGMGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECVILGLPDKDYGEIVGALIVPHADVKAKRDQESKPVLTLEELSTWAKEKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKLVVSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARD9</accession>
    <name>V7ARD9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_009G028300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARD9"/>
    <dbReference type="Gramene" id="ESW08212">
        <property type="protein sequence ID" value="ESW08212"/>
        <property type="gene ID" value="PHAVU_009G028300g"/>
    </dbReference>
    <dbReference type="OMA" id="MQIGRIR"/>
    <dbReference type="OrthoDB" id="1436136at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW08212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="405" mass="44117" checksum="BFC73717E0866C6E" modified="2014-02-19" version="1" fragment="single">MTEIRDPISWSCEGSSSAEALTFVPNPLPPVPNTPLLNTPQLNNPLSSAEGLMLDEAAPSLQSQDITLAGYFSQLSELQNANSVGNEGIAHHNEQNSTNQLSIPNTIVNNNYNVININQSSSYPALVNQTPTNSERANSTGAFAPPTGSTLLTHHNDTTNSPAAWSSRPDQFQFSASDVYGAQHFPNYTQSLQPFTLVQNQIDNASELQQMLDLHSQDSRMSEPFSNLQPGLVTMPPNSFQPGYISILSDPASPSGSSVIYGQNPILFAPSSNSFASGSSVLPMYPQLDQHQHPQVMMPYDQGQSGSSRPQWSQIGEYNQRMTTHDLQRQTSTSSQTLISRFLGHSSSRTTEGISSRVPNSRDAEIAPVLRNQPSEALQRILNMNPSWMIPSITSDQSGSMPTER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7AU13</accession>
    <name>V7AU13_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="17">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_009G018600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for arbuscular mycorrhiza (AM) development during AM symbiosis with AM fungi (e.g. Glomeromycota intraradices).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Extracellular space</location>
            <location evidence="2">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AU13"/>
    <dbReference type="SMR" id="V7AU13"/>
    <dbReference type="MEROPS" id="S08.A22"/>
    <dbReference type="Gramene" id="ESW08103">
        <property type="protein sequence ID" value="ESW08103"/>
        <property type="gene ID" value="PHAVU_009G018600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUSK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VHTYKHG"/>
    <dbReference type="OrthoDB" id="10256524at2759"/>
    <dbReference type="PhylomeDB" id="V7AU13"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.30.30:FF:000005">
        <property type="entry name" value="subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.80:FF:000002">
        <property type="entry name" value="Subtilisin-like protease SBT5.3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 12" id="KW-0645">Protease</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 12" id="KW-0720">Serine protease</keyword>
    <keyword evidence="7 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754076" evidence="13">
        <location>
            <begin position="25"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="15">
        <location>
            <begin position="37"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="14">
        <location>
            <begin position="142"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="16">
        <location>
            <begin position="669"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="551"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW08103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="768" mass="81390" checksum="B08FB8F9B520B305" modified="2014-02-19" version="1">MQGNTLLLHIFTLFLLLGATSSSAKDGINDRINSKQVYIVYMGAADSTNASLRNDHAQLLNAVLRRNDKALVRNYKHGFSGFAARLSKEEANSIAQKPGVVSVFPDPVLKLHTTRSWDFLKYQTHVKIDANPKTLSNSSSSSDVVLGILDTGIWPEAASFSDDGMGPVPSRWKGTCMKSHDFNSSNCNRKLIGARFYSDPNGDEGDSTPRDSIGHGTHVASTAVGAAVTNVSYYGLAAGSAKGGSPESRLAVYRVCSNFGCSGSAILAAFDDAINDGVDVLSLSLGASPGFQPDLTTDPIAIGAFHAVERGIVVACSAGNSGPSSYTVVNDAPWILTVAASTIDRDFQSNVVLGGNKTIKGRAINFSPLSNSAQYSLVFGETSKASNASLAEASQCQPDSLDGNKVKGKIVLCDGRNDEYSTSEIIDTVKAVGGIGLVHITDEYGAIASYYGDFPVTVTSSKDGATILQYINSSNPVATILPTTTVVDYKPAPLVPDFSSRGPSTLSSNILKPDIAAPGVNILAAWTENSSDDDVPKGRKPSLYNIISGTSMACPHVSGLASSLKTRNPTWSASAIKSAIMTSAIQSDNMKTPITTDSGSVATPYDYGAGEMTTSESLQPGLVYETNTIDYLNFLCYIGLDITKVKVISRTVPDNFSCPKDSSSDLISNINYPSIAVNFTGKATVNVSRTVTNVGEEDETVYSPVVEAPSGVKVTLTPNKLQFTKSSKKLSYQVIFSPTLTSLKEDLFGSITWSNGKYMVRSPFVLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AXX7</accession>
    <name>V7AXX7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G215000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AXX7"/>
    <dbReference type="Gramene" id="ESW10502">
        <property type="protein sequence ID" value="ESW10502"/>
        <property type="gene ID" value="PHAVU_009G215000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSYAKCG"/>
    <dbReference type="OrthoDB" id="1853968at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001528">
        <property type="entry name" value="pentatricopeptide repeat-containing protein At1g11290, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000285">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001970">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:003741">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF347">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="181"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="282"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="383"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="486"/>
            <end position="520"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="730" mass="83472" checksum="2274F94AD37AE888" modified="2014-02-19" version="1">MFHSHHRLLHIPRIFQTRFSSTSSSMLDLCTKPQHLQQLHARFFLHGLHQNQSLSSKLMDCYAKFGLLDLSQKLFYYTQNPDIVLYRAILRTLYQFGEYDNTLFLYKAMVGKSMYPDEESCSFVLRSCFCLSHEQGKMIHAQIVRLGLDAFDLVGRTLVELYDMNGFFNVDEPVEGKYVMELNYWNNLISEASENGKMEESFKHFCRMRKENIQPNSITVIGLLRSTVELNSLKTGQALHSFVVVSCLYGKLTVNTALLSMYAKLGSLEDARMVFEKMPDKDLVVWNIMISAYSGNGFPKESLELVYCMVRSGFRPDLFTAIPAISSITQLKYNEWGKQMHAHVIRNGSDYQVSIHNSLIDMYSACDDLNLAQKIFGFIMNKTVVSWSAMIKGYTMHDRPLEALSLFLEMKRSGTRLDFIIVINILPAFAKIGALHYVSYLHGYSLKTSLDSLKSLKTSFLSSYAKCGCIEMARKLFDEEKSIHRDIIAWNSMISAYSKHGEWFRCFHLYSQMKLSSIVPDQVTFLGLLTACVNSGLVSKGKEIFKEMVEIYGYQPCKEHHTCMVDLLGRSGQIHEANEIIKTIPLESDARVYGPLLSACKMHSETRLAELAAQKLINMEPKNAGNYVLLSNIYAAAGNWDKVAKMRSFLRDRGLKKTPGCSWLELNGQVHEFRVADKSHQRWEDIYSILNVLELEAGDMEDDDLELFDPFVIKGCELPMNQPNLRHNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZN7</accession>
    <name>V7AZN7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G234700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZN7"/>
    <dbReference type="SMR" id="V7AZN7"/>
    <dbReference type="STRING" id="3885.V7AZN7"/>
    <dbReference type="Gramene" id="ESW10750">
        <property type="protein sequence ID" value="ESW10750"/>
        <property type="gene ID" value="PHAVU_009G234700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3184">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SYYVDAQ"/>
    <dbReference type="OrthoDB" id="28644at2759"/>
    <dbReference type="PhylomeDB" id="V7AZN7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022625">
        <property type="term" value="C:cytosolic large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000463">
        <property type="term" value="P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd01657">
        <property type="entry name" value="Ribosomal_L7_archeal_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1390.20:FF:000002">
        <property type="entry name" value="60S ribosomal protein L7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1390.20:FF:000003">
        <property type="entry name" value="60S ribosomal protein L7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="entry name" value="Ribosomal protein L30, ferredoxin-like fold domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="Ribo_uL30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039699">
        <property type="entry name" value="Ribosomal_uL30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018038">
        <property type="entry name" value="Ribosomal_uL30_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005998">
        <property type="entry name" value="Ribosomal_uL30_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035808">
        <property type="entry name" value="Ribosomal_uL30_euk_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016082">
        <property type="entry name" value="Ribosomal_uL30_ferredoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012988">
        <property type="entry name" value="Ribosomal_uL30_N_euk"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01310">
        <property type="entry name" value="uL30_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524">
        <property type="entry name" value="60S RIBOSOMAL PROTEIN L7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11524:SF16">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN UL30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00327">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08079">
        <property type="entry name" value="Ribosomal_L30_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="Ribosomal protein L30p/L7e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00634">
        <property type="entry name" value="RIBOSOMAL_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Large ribosomal subunit protein uL30 N-terminal eukaryotes" evidence="5">
        <location>
            <begin position="10"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="Large ribosomal subunit protein uL30-like ferredoxin-like fold" evidence="4">
        <location>
            <begin position="86"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="244" mass="28570" checksum="587529BF4C21908A" modified="2014-02-19" version="1">MGEGEAKAMVPESVLKKEKRNEEWALAKKQNLEAAKKKRFETRKLIFSRAKQYAKEYEEQQKELIRLKREAKLKGGFYVDPETKLLFIIRIRGINAMDPKTRKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKVNKQRIALTDNSIIEQTLGKHEIICIEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLEKKRNHYVEGGDAGNREDYINELIRRMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZW0</accession>
    <name>V7AZW0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_008G007100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZW0"/>
    <dbReference type="STRING" id="3885.V7AZW0"/>
    <dbReference type="Gramene" id="ESW11162">
        <property type="protein sequence ID" value="ESW11162"/>
        <property type="gene ID" value="PHAVU_008G007100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ6N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SATCMNN"/>
    <dbReference type="OrthoDB" id="1928505at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032795">
        <property type="entry name" value="DUF3741-assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21726:SF61">
        <property type="entry name" value="DNAA INITIATOR-ASSOCIATING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21726">
        <property type="entry name" value="PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14383">
        <property type="entry name" value="VARLMGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3741" evidence="3">
        <location>
            <begin position="93"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4378" evidence="2">
        <location>
            <begin position="763"/>
            <end position="922"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="189"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="381"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="519"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="189"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="407"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="447"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="529"/>
            <end position="539"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW11162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="936" mass="103895" checksum="8BF773B6C05EBEA0" modified="2014-02-19" version="1">MNDSTVKNLAITERKVQQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMSNSKIHLIANENSGGFPSANKKGGNHGFDVDQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCADGKNESLGGDHCELERQGMDLEVGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIKSVLSRGRKYHHHHHHPKFASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKVSLAYPASMYPSKTGIVTNDVQNQSCYEAGSCKQLMEQSSCKNCGNLLDVVDCKLEVGGQPLDHPPVVSDVITATSMVSSEKKGKSFSSLGHERDVVLLRSQEKLISLDSEEKGKNNAHISWSEPTVRRMSMPRDCLPKWNSSCQSSRTLEDDPTSFPSKHKTQSQEQMISSERYSSGSTMSDMQVKRVSSSTSTMNGAKDFVSMNRSLSGRTRTRSPTKADSSKFDLERKPYNRQHNSLSHVRTLERKRRIPNATQLEGTGSVYSVGAKQRNLHSNGLCGKRRDSNASSLNNSIGKNKQVAQGERVIKVNDNKINGVVSFTFNSPLKQKLGITVEREETSSDNESIKRPKPLRVDALGAFLEQKLKELTSQRDEELATGFPPKKSSAMILQELISALSSEHLICHDGHHVFNDNVGLHYGEKQERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNHSCYGQLEHDTELSDSATSFTKGRIVEILSDLVSQIPKALESLHTFGSELTISKLNHMKDILLHAELVLGITTDRRQDEGPQLIIHRFLVDDLESMTSGATWNDVGCEDSKQRKEVKGFLLDCVVEYLESNCSLYFNSGFRTWTKLPLCMRAEMLAKEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWLDFDIEAFESGVDIDGDILQILVDEVVEDLVGCTQNSIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0B2</accession>
    <name>V7B0B2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RanBP2-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G198300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="7" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0B2"/>
    <dbReference type="SMR" id="V7B0B2"/>
    <dbReference type="Gramene" id="ESW10308">
        <property type="protein sequence ID" value="ESW10308"/>
        <property type="gene ID" value="PHAVU_009G198300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW10309">
        <property type="protein sequence ID" value="ESW10309"/>
        <property type="gene ID" value="PHAVU_009G198300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PTTYRYN"/>
    <dbReference type="OrthoDB" id="448399at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.1060.10:FF:000023">
        <property type="entry name" value="Ran-binding zinc finger protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1060.10">
        <property type="entry name" value="Zinc finger, RanBP2-type"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001876">
        <property type="entry name" value="Znf_RanBP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036443">
        <property type="entry name" value="Znf_RanBP2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23111:SF95">
        <property type="entry name" value="RANBP2-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23111">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00641">
        <property type="entry name" value="Zn_ribbon_RanBP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00547">
        <property type="entry name" value="ZnF_RBZ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90209">
        <property type="entry name" value="Ran binding protein zinc finger-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01358">
        <property type="entry name" value="ZF_RANBP2_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50199">
        <property type="entry name" value="ZF_RANBP2_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RanBP2-type" evidence="5">
        <location>
            <begin position="4"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="RanBP2-type" evidence="5">
        <location>
            <begin position="48"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="RanBP2-type" evidence="5">
        <location>
            <begin position="105"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW10308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="140" mass="15346" checksum="DBA079A03EDC4675" modified="2014-02-19" version="1">MSWSGGDWMCGACQHINFKKRDSCQSCGYPKFGGPDPTAYRYNLTEALAGDWYCTSMNCGAHNYASRSSCYRCGALKDGYSCGLGENMDACGGYASDCNHPLGWKTGDWICTRIGCGVHNYASRTECFKCKTPRNFGDAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1E8</accession>
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            <fullName evidence="1">DSBA-like thioredoxin domain-containing protein</fullName>
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        <name evidence="2" type="ORF">PHAVU_008G026800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1E8"/>
    <dbReference type="SMR" id="V7B1E8"/>
    <dbReference type="STRING" id="3885.V7B1E8"/>
    <dbReference type="Gramene" id="ESW11400">
        <property type="protein sequence ID" value="ESW11400"/>
        <property type="gene ID" value="PHAVU_008G026800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTH7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCWIAKK"/>
    <dbReference type="OrthoDB" id="1930760at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03024">
        <property type="entry name" value="DsbA_FrnE"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13887">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE KAPPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13887:SF41">
        <property type="entry name" value="THIOREDOXIN SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA-like thioredoxin" evidence="1">
        <location>
            <begin position="12"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="24120" checksum="646277A2AC22E884" modified="2014-02-19" version="1">MSGTSEKKLVRIDVSSDTVCPWCFVGKKNLDKAIAASNDKYNFEIIWHPFQLNPDAPKEGIDKREYYRRKFGSQSERMEARMSEVFKNVGLQYSLSGLKGNTMDSHRLIYFARQHGLDKQHDLVEELNIGYFTQGKYIGDHKFLLESAAKVGIEGAEEFLKNPNSGLKEVEEELKTYSGNITGVPYYVINGNHKLSGGQPPEVFLRAFQVATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
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    <name>V7B1G2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G028000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G2"/>
    <dbReference type="SMR" id="V7B1G2"/>
    <dbReference type="Gramene" id="ESW11415">
        <property type="protein sequence ID" value="ESW11415"/>
        <property type="gene ID" value="PHAVU_008G028000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0048">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VNQFSKC"/>
    <dbReference type="OrthoDB" id="2143914at2759"/>
    <dbReference type="PhylomeDB" id="V7B1G2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001216">
        <property type="term" value="F:DNA-binding transcription activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd00167">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000011">
        <property type="entry name" value="Myb transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47995">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB33-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47995:SF18">
        <property type="entry name" value="TRANSCRIPTION FACTOR MYB65"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="11"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="11"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="7">
        <location>
            <begin position="64"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="8">
        <location>
            <begin position="68"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="261" mass="30132" checksum="C2731A482A1D78A9" modified="2014-02-19" version="1">MVAMMSFLSTDKGWTKGPWTGEEDKLLSEYVCLYGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGQLTPLEEGTIMELHAILGNKWSTIAKYLPGRTDNEIKNYWRTHFGKREKSKHKKLQRRQKEQQPKKCDFRSIMCHKDTINETKSFETQNNKLQEIGLMYPTIDNQYNTVPSMHEGFSSTWPDTLVDDGLWFGLWDFDEPLSFADCVNQFSKCAMPNEGTFSLGGDSTQSDDKTYCFDETYGNLFYGKDMFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1N4</accession>
    <name>V7B1N4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">WRKY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_008G054100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the WRKY group I family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1N4"/>
    <dbReference type="SMR" id="V7B1N4"/>
    <dbReference type="STRING" id="3885.V7B1N4"/>
    <dbReference type="Gramene" id="ESW11719">
        <property type="protein sequence ID" value="ESW11719"/>
        <property type="gene ID" value="PHAVU_008G054100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRFS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SLCQMKY"/>
    <dbReference type="OrthoDB" id="2021103at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000006">
        <property type="entry name" value="WRKY transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.80:FF:000003">
        <property type="entry name" value="WRKY transcription factor 57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.80">
        <property type="entry name" value="WRKY domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003657">
        <property type="entry name" value="WRKY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036576">
        <property type="entry name" value="WRKY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044810">
        <property type="entry name" value="WRKY_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221:SF126">
        <property type="entry name" value="WRKY DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31221">
        <property type="entry name" value="WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03106">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00774">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118290">
        <property type="entry name" value="WRKY DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50811">
        <property type="entry name" value="WRKY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="WRKY" evidence="11">
        <location>
            <begin position="230"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="WRKY" evidence="11">
        <location>
            <begin position="444"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="335"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="16"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="335"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="349"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00061157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW11719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="714" mass="78009" checksum="8245B8ACB75701D0" modified="2014-02-19" version="1">MEHDDLNNNQNKNCNEESLVSESNGAKRSIAERRGFNSNAAQINTALFRTATSTTPSPSPAARSPRLTIPPGISPTALLGSPIMLPNSQAVPSSPTTGSFFMMPPLPQESNPLLPPYSAPLNQVSSNFHSIKGGNRESQPLAQVQSPLDFSFPADFSKGHSVKNSEVNSYNDIEMVNDAIVNANNVEMPMSGSEEVSDESAVPKNGINGEDIGGRPAPEGELKEASHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGNHNHVKPHSTHRGSALSTDEVSDMAEEGALAKVDGGFMWRNVQSGLKDSKNSLDWKGDGQERTSSTSVVTEISDPISTNKAKSLSMFESEETPELSSTLASHDMEEDGTTQALALVEDEAENDESEPKRRKKESYAVESTLPPRSVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVLTTYEGKHNHEVPTARTNNQINTSDGGLPPNGVNGQVALALPGNAGIKAETHQTLAHHFDRKPEFSNEFLRPSLIGSFNNDMKFGPSSLCQMKYPSLNNTMPYGYAMNPDRCAAPQAGSIASMFPDFPMPLPLNLPSSGKFSISGLNFNCAKPINPIQSFLSGQQVKDIDTVFLRPKQEQKDDTIYGSCIPSLDANASLTSSSAAPSIYQRVMQNFPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2R7</accession>
    <name>V7B2R7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G005900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2R7"/>
    <dbReference type="Gramene" id="ESW11148">
        <property type="protein sequence ID" value="ESW11148"/>
        <property type="gene ID" value="PHAVU_008G005900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVVZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNSHIAG"/>
    <dbReference type="OrthoDB" id="196782at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025461">
        <property type="entry name" value="ABA4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543:SF10">
        <property type="entry name" value="NEOXANTHIN SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543">
        <property type="entry name" value="PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14108">
        <property type="entry name" value="ABA4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW11148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="248" mass="26925" checksum="B617077680AA8856" modified="2014-02-19" version="1">MSFSSCLSHSPLTLKAIKPCGSVGKGQNFGFSFRSNEAELCNSHIAGSGRLQGNLPRVNLSGDWSFIGGSKIVVKPNATGLLPYPKRGRMQASCFIGSQLASTAFTAGTVAVLPFYTLMVLAPNSVLTKKSMDSSLPYVVLGILYAYLLYLSWTPETVRLIFASKYLLPELPGIARMFSSEMTLASAWIHLLVVDLFAARHVFQDGLKNQIETRHSVSFCLFFCPIGILTHVITKAMTKPATKEGHGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4N3</accession>
    <name>V7B4N3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G140000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4N3"/>
    <dbReference type="Gramene" id="ESW12759">
        <property type="protein sequence ID" value="ESW12759"/>
        <property type="gene ID" value="PHAVU_008G140000g"/>
    </dbReference>
    <dbReference type="OMA" id="IRSCHIA"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="111" mass="12370" checksum="587D5FE42E83F9D5" modified="2014-02-19" version="1">MTKIFFFISLIKDCIVEQVVHISFLNEGKLNNKHYETHFPTMKAILIAFLLFASLFILPTSTLARQLKGVSPGTRDPNNPAIKCDPGKSYRTCNPAAAKPTPPCSPYVRNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7B669</accession>
    <name>V7B669_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G165000g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="ESW13065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B669"/>
    <dbReference type="SMR" id="V7B669"/>
    <dbReference type="STRING" id="3885.V7B669"/>
    <dbReference type="Gramene" id="ESW13065">
        <property type="protein sequence ID" value="ESW13065"/>
        <property type="gene ID" value="PHAVU_008G165000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RMWY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAMMDSW"/>
    <dbReference type="OrthoDB" id="665906at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000006">
        <property type="entry name" value="ethylene-responsive transcription factor ERF014-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051032">
        <property type="entry name" value="AP2/ERF_TF_ERF_subfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31985:SF231">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31985">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="10">
        <location>
            <begin position="33"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="127"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="15"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW13065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="238" mass="25858" checksum="C6006F8FD3FE4276" modified="2014-02-19" version="1">MVKPENKIHTESSKPLRALSSSSSPPLSDSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSHYIPQDTLMSPKSIQRVAAAAANNFLDNAIVATTPSSPPSPPLASTSSSSLVSSPSMSSSPSDQIDDDVSLLSPFGAYIPPPPTINCDQPNDSMAMMESWYGLEELQSPKYVEQMLSGAFFDIDSTQLLDDLYEESDIRLWSFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B780</accession>
    <name>V7B780_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Triacylglycerol lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_008G2149000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B780"/>
    <dbReference type="STRING" id="3885.V7B780"/>
    <dbReference type="Gramene" id="ESW13659">
        <property type="protein sequence ID" value="ESW13659"/>
        <property type="gene ID" value="PHAVU_008G2149000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXY5">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YTLGWRG"/>
    <dbReference type="OrthoDB" id="1934526at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36703">
        <property type="entry name" value="TRIACYLGLYCEROL LIPASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36703:SF1">
        <property type="entry name" value="TRIACYLGLYCEROL LIPASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW13659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="166" mass="18435" checksum="AC4F1F7073590B40" modified="2014-02-19" version="1" fragment="single">DTFERHRVVFTVGTSIASVATAWFGYSLRHLHDTKVDQRLQSIENAVKSNSNLQHAEIKDIVAGSGGCSIPACVATAGTSLVIGYALGWRGGIWYATKKFRKEQMKMLGQITPRRWQLLGKIKPKGLQFQFLRRNLTRFKVSDTVLQTSESSIKDAAITHVTGKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B856</accession>
    <name>V7B856_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box/LRR-repeat protein 15-like leucin rich repeat domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G251200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B856"/>
    <dbReference type="STRING" id="3885.V7B856"/>
    <dbReference type="Gramene" id="ESW14077">
        <property type="protein sequence ID" value="ESW14077"/>
        <property type="gene ID" value="PHAVU_008G251200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1947">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIRGCPH"/>
    <dbReference type="OrthoDB" id="550575at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019005">
        <property type="term" value="C:SCF ubiquitin ligase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031146">
        <property type="term" value="P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000276">
        <property type="entry name" value="F-box/LRR-repeat protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057207">
        <property type="entry name" value="FBXL15_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006553">
        <property type="entry name" value="Leu-rich_rpt_Cys-con_subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318:SF37">
        <property type="entry name" value="F-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13318">
        <property type="entry name" value="PARTNER OF PAIRED, ISOFORM B-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25372">
        <property type="entry name" value="DUF7885"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13516">
        <property type="entry name" value="LRR_6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00367">
        <property type="entry name" value="LRR_CC"/>
        <property type="match status" value="16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box/LRR-repeat protein 15-like leucin rich repeat" evidence="1">
        <location>
            <begin position="84"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="F-box/LRR-repeat protein 15-like leucin rich repeat" evidence="1">
        <location>
            <begin position="369"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="domain" description="F-box/LRR-repeat protein 15-like leucin rich repeat" evidence="1">
        <location>
            <begin position="525"/>
            <end position="606"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF25372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW14077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="646" mass="71566" checksum="C4700FCCDE7ACE79" modified="2014-02-19" version="1">MEPPNFFDLLAKDLLYAILDHLRHDPFAPKFFSQACKSFYALESTHRTALKPRRLDFLPRAPQRYPSILHLDLTLCPSVDDFALTALSLAWRASLRSVDLSRCRLFSHVGLSALALNCTCLLEVDLSNRPDLTDVAAKAIAEAVNLERLRLGRCKGITDMGIGCIAVRCGRLRHVGLRWCIRVTDFGAGLIAIKCKEIRSLDLSYMPQITERCLHHILQLEHLEDLVLEHCLGIEDHGLAALQVNCKSMKMLNLSKCQNISHVGIASLTNGAQNLEKLILSSSLVVTADLAKCLQSFPRLQLVKLDGCLGLESGLKAIGNSCNSLKELNLSKCVGVTDENLSFLVKTNKNLEKLDITCCRTITPEFISSLTNSCLRLTSLRMESCSLISREGFLFIGRCQLLEELDVTDTEIDDIGLCSISRCTKLSSLKLGICLMITDKGLKHIAKSCSQLKHLDLYRSSRITDEGIVAIALGCPSLKAVNIAYNSNITDSSLAFLSKCQKLRTLEIRGCPHISPQGLSNIVVGCKNLETMDLKKCRKINDTGIIQLAQHSQSLKQIKLSYCSVTDVGLIALASISCLQYISIFHVEGLTSNGLVAFLLACQNLTKAKLHACFEPLIPQQILKYMEARGCVLVWREKTFEASWWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B8R0</accession>
    <name>V7B8R0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G260600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B8R0"/>
    <dbReference type="SMR" id="V7B8R0"/>
    <dbReference type="Gramene" id="ESW14194">
        <property type="protein sequence ID" value="ESW14194"/>
        <property type="gene ID" value="PHAVU_008G260600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCLHHFK"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000090">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000380">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF344">
        <property type="entry name" value="OS07G0636900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="10"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="117"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="148"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="249"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="284"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="319"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="389"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="420"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="455"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="491"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="592"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="812"/>
            <end position="893"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW14194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="893" mass="100815" checksum="A6AE709BF5BE62C7" modified="2014-02-19" version="1">MEKNLIILHSKPWPSLLIPSHSATQLEWQGSTRVLANSNSVSMTNLSHPKLIDTQLNELCVNGHLSEAVGILDSLAQQGSKVRPITFINLLQACIDRDCIWVGRELHARVGLVRKVNPFVETKLVSMYAKCGLLEEARKVFDEMHERNLFTWSAMIGACSRDLKWDEVVELFYNMMQHGVLPDDFLLPKILKACGKCRAFEAGRLIHSMVIRRGRCSSLRVINSILAVYAKCGEMTYAEKLFRRMEERNYVSWNVIITGYCQKGEIEEARKYFDAMQGEGIDPGLVTWNILIASYSQCGQSEIAIDLMRMMESFGITPDVYTWTSLISGFTQKGRINDAFDLLREMFIVGVEPNSITIASAVSACASVKSLSMGSEVHSIAVKTSLVDDMLIGNSLIDMYAKGGNLEAAQRIFDVMLKRDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGAEDEALDLFQRIEKDGNIKPNVASWNSLISGFLQSRQKEKALQIFRRMQFSNMAPNLVTVLTILPACANLVAAKKVKEIHCCAIRRNLVSELYVSNTFIDNYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGSSESALDLFDQMNKDDRLHPNRVTLASIISAYSHAGMVDEGKHAFSNMSEDFKIILDLEHYSAMVYLLGRSGKLAEAQEFILNMPIEPNISVWTAFLTACRIHRNFGMAIFAGERLLELDPENIITQHLLSQAYSLCGKYWEAPKMTKLEKEKIPVGQSWIEMNNMVHTFVVGDQSKPYLDKLHSWLKRVHVNVKAHISDNGLCIEEEEKEDINSVHSEKLAIAFALIDSHHRPQILRIVKNLRVCKDCHDTAKYISLAYGCEIYLSDSNCLHHFKDGHCSCRDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB43</accession>
    <name>V7BB43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G214700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB43"/>
    <dbReference type="SMR" id="V7BB43"/>
    <dbReference type="STRING" id="3885.V7BB43"/>
    <dbReference type="Gramene" id="ESW13656">
        <property type="protein sequence ID" value="ESW13656"/>
        <property type="gene ID" value="PHAVU_008G214700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYHI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FKSGEVC"/>
    <dbReference type="OrthoDB" id="1931494at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677">
        <property type="entry name" value="AP2 DOMAIN CLASS TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31677:SF252">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0936">Ethylene signaling pathway</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="8">
        <location>
            <begin position="27"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="117"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="16"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="117"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW13656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="204" mass="22424" checksum="D3AB21C25FDA0B98" modified="2014-02-19" version="1">MRRGRPTAAVAAVHPSADHHPPPKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPNPETDHSHSQIPLYQAHGLSKFDPVQVNRPTTSGMSSTVESFSGPRVPSSSTLHPRKPVVSPVVIPPLDDCHSDCDSSSVVEDEDCVLTSSFRQPLPFDLNLPPPGADDDIPATVLCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCQ3</accession>
    <name>V7BCQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_007G088600g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Endomembrane system</location>
            <topology evidence="14">Single-pass type I membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="15">Protein storage vacuole membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCQ3"/>
    <dbReference type="SMR" id="V7BCQ3"/>
    <dbReference type="STRING" id="3885.V7BCQ3"/>
    <dbReference type="Gramene" id="ESW15632">
        <property type="protein sequence ID" value="ESW15632"/>
        <property type="gene ID" value="PHAVU_007G088600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4628">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VYTIFTV"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="PhylomeDB" id="V7BCQ3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032586">
        <property type="term" value="C:protein storage vacuole membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02123">
        <property type="entry name" value="PA_C_RZF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000276">
        <property type="entry name" value="Receptor homology region transmembrane domain-and RING domain-containing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.30.30:FF:000020">
        <property type="entry name" value="Receptor homology region transmembrane domain-and RING domain-containing protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051653">
        <property type="entry name" value="E3_ligase_sorting_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046450">
        <property type="entry name" value="PA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003137">
        <property type="entry name" value="PA_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044744">
        <property type="entry name" value="ZNRF4/RNF13/RNF167_PA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47168">
        <property type="entry name" value="RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47168:SF5">
        <property type="entry name" value="RING-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02225">
        <property type="entry name" value="PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52025">
        <property type="entry name" value="PA domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="12" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 19" id="KW-0732">Signal</keyword>
    <keyword evidence="3 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 18" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="2" id="KW-0926">Vacuole</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 16" id="KW-0863">Zinc-finger</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756568" description="RING-type domain-containing protein" evidence="19">
        <location>
            <begin position="22"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="162"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="20">
        <location>
            <begin position="232"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="336"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="343"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00037435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00046288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00060484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW15632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="439" mass="47841" checksum="88994BB128329176" modified="2014-02-19" version="1">MGTLNLLFFFSLVSLCAMAAAKVVLIGNNITLSFDDIEANFAPTVKGSGQYGVLYLAEPLDACTELTNKVERLLNVSSPFALVVRGGCSFEEKVRRAQKAGFEAVIVYDNEEDGVLVAMAGNSAGIRIHAVFVSKASGEILKKYAGWTNVEIWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRGSLREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYCIGEKIRILPCCHKFHAICVDSWLTSWRTFCPVCKRDARTGLTEPPPSESTPLLSSSSAASVLSSVRSSLASSSAIQIARTASQTSSISRNHSIASTPHFHPSLRSSYHQSPSLSMSRSSVDLRNASQRSLASHLNSPHSMGYPSLPSLNSRYMSPYIPSPSNASVSYLGSSSHQQHPLRYSESAASFSPFASTHSLPEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BE91</accession>
    <name>V7BE91_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="6 7">6.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_007G054900g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:15421"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57560"/>
            <dbReference type="ChEBI" id="CHEBI:83139"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.2.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Lipid metabolism; fatty acid metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.3" evidence="6 7"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BE91"/>
    <dbReference type="SMR" id="V7BE91"/>
    <dbReference type="STRING" id="3885.V7BE91"/>
    <dbReference type="Gramene" id="ESW15223">
        <property type="protein sequence ID" value="ESW15223"/>
        <property type="gene ID" value="PHAVU_007G054900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1256">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KCPIVEH"/>
    <dbReference type="OrthoDB" id="1700726at2759"/>
    <dbReference type="UniPathway" id="UPA00199"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd05927">
        <property type="entry name" value="LC-FACS_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045311">
        <property type="entry name" value="LC-FACS_euk"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272:SF33">
        <property type="entry name" value="AMP-BINDING DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43272">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="8">
        <location>
            <begin position="110"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00026121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU369030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW15223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="696" mass="76688" checksum="3E02BF8BA283719A" modified="2014-02-19" version="1">MDHTPAAQRRLRALHDHLSPTAADSPSHLRSNPTAGEFYSEQGYSVVLPEKLQTGKWNVYRSVRSPLQLVSKFPNHPEIGTLHDNFVRSVDTFRDYKYLGTRVRIDGTVGEYKWMTYGEAGTARSAIGSGLIYYGVSKGSSVGLYFINRPEWLILDHACSAYSFVSVPLYDTLGPDAVKYIVSHASVQVIFCVAETLNIFLSYLSEIPTVRLIVVVGGIDDQIPSVPSSNGVQIITYSKLLNQGRSNLQPFCPPKPDDIATICYTSGTTGTPKGAVLTHGNFIASVAGGTMDEKFGPSDVYISYLPLAHIYERANQVMAVHFGIAVGFFQGDSMKLMDDIAALRPTIFCSVPRLYNRIYAGIINAVKTSGGLKERLFNAAYNAKRQALLHGKNPSPMWDRLVFNKIKEKLGGRVRFIASGASPLSPDIMEFLKICFGGRVTEGYGMTESTCVISCIDEGDTLGGHVGSPNAACEIKLVDVPEMNYTSDDLPNPRGEICVRGPIVFRGYHKDEIQTREIIDEDGWLHTGDIGTWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNASLVAVVSVDHDMLKAWAASEGIMYNDLAQLCNDPRAKEAVLAELDAAGRDAQLRGFEFVKAVTLVVEPFTLENGLLTPTFKIKRPQAKEYFAKAISDMYTELSRTDISQKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFK3</accession>
    <name>V7BFK3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gag1-like clamp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G148400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFK3"/>
    <dbReference type="STRING" id="3885.V7BFK3"/>
    <dbReference type="Gramene" id="ESW16339">
        <property type="protein sequence ID" value="ESW16339"/>
        <property type="gene ID" value="PHAVU_007G148400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW16340">
        <property type="protein sequence ID" value="ESW16340"/>
        <property type="gene ID" value="PHAVU_007G148400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S3M9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLVDFWH"/>
    <dbReference type="OrthoDB" id="1896025at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025124">
        <property type="entry name" value="Gag1-like_clamp"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33373:SF23">
        <property type="entry name" value="DUF4050 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33373">
        <property type="entry name" value="OS07G0479600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13259">
        <property type="entry name" value="clamp_Gag1-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gag1-like clamp" evidence="2">
        <location>
            <begin position="9"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="Gag1-like clamp" evidence="2">
        <location>
            <begin position="67"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="104" mass="12105" checksum="0170BBD3D851EA63" modified="2014-02-19" version="1">MELNGSSSNTHQKCSSEGSQDADKKSTEKELFVNHAEIAWHQMRKEWVGNRSKKLERPPRDSIMSLTTSYEDLLLSKEPFQQPISLTEMVDFLVDFWHEEGLYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHS9</accession>
    <name>V7BHS9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G208000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHS9"/>
    <dbReference type="SMR" id="V7BHS9"/>
    <dbReference type="STRING" id="3885.V7BHS9"/>
    <dbReference type="Gramene" id="ESW17075">
        <property type="protein sequence ID" value="ESW17075"/>
        <property type="gene ID" value="PHAVU_007G208000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3109">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RHHTIDP"/>
    <dbReference type="OrthoDB" id="1065058at2759"/>
    <dbReference type="PhylomeDB" id="V7BHS9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd02604">
        <property type="entry name" value="HAD_5NT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010237">
        <property type="entry name" value="Pyr-5-nucltdase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01993">
        <property type="entry name" value="Pyr-5-nucltdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12725">
        <property type="entry name" value="HALOACID DEHALOGENASE-LIKE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12725:SF117">
        <property type="entry name" value="HALOACID DEHALOGENASE-LIKE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00702">
        <property type="entry name" value="Hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01132">
        <property type="entry name" value="C1.5.3:_5'-Nucleotidase_Like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01129">
        <property type="entry name" value="C1.5:_HAD__Beta-PGM__Phosphata"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW17075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="272" mass="30893" checksum="EB8DAC837D571F8A" modified="2014-02-19" version="1">MDTALRNAGVKYECLLFDMDDTLYPLSIGLNLFCRKNIQEYMLEHLHIEENEVPKMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLISMPQRKIIFTNADHAHAVKVLNRMGLEDCFEGIICFETLNPHKQYMDLPNDNHVLTDIAESGCFNSHTRILCKPSVEAFEAAIRTSNVDPKKTIFFDDSVRNVASAKVAGLHTVILGHSDLVPGADHALNSIHNIKEALPEIWEIEESNQQQKIQPPAVETMVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BIP5</accession>
    <name>V7BIP5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G265600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BIP5"/>
    <dbReference type="Gramene" id="ESW17757">
        <property type="protein sequence ID" value="ESW17757"/>
        <property type="gene ID" value="PHAVU_007G265600g"/>
    </dbReference>
    <dbReference type="OMA" id="KDVMPPN"/>
    <dbReference type="OrthoDB" id="1904110at2759"/>
    <dbReference type="PhylomeDB" id="V7BIP5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33564">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33564:SF8">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="133" mass="15771" checksum="49840EDFF342852E" modified="2014-02-19" version="1">MESSMRLEYLMTVFAVSGGMVFLFHQVNKHLCNKFLKKFECEIRGSTKHEAKKKVRFAKDMVELIPMENSIMENSMTDRINMAKEQEVIGKVMDLDDTENWKHGEKFKDVMPPNRVVLYRGIMNNRKERFDFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ15</accession>
    <name>V7BJ15_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G003000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW17974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ15"/>
    <dbReference type="Gramene" id="ESW17974">
        <property type="protein sequence ID" value="ESW17974"/>
        <property type="gene ID" value="PHAVU_006G003000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0892">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTIMHEE"/>
    <dbReference type="OrthoDB" id="21615at2759"/>
    <dbReference type="PhylomeDB" id="V7BJ15"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35491">
        <property type="entry name" value="OS12G0638500-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35491:SF12">
        <property type="entry name" value="RRM DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="180"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="694"/>
            <end position="727"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="84"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="216"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="248"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="694"/>
            <end position="710"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="812" mass="87530" checksum="4517BBBDCC5E48A1" modified="2014-02-19" version="1">MDVVLTLGRGDTDFGDETKSTGNTIMHEEARGKLGSSGFDSRDRRKSKYLSYPYTNLRSKQKDSPAETENSKTPYPSRKGGASSVGSNPANISLSNAKLGSRRFRKNWYRKFVSCNNQSSSPEFMNASIVDVLSGLFSTAVDCMFPVGKENFDFVEQFFCRYRISNYYDEAELATFQVNAQEPGKPVGNDLPDTTSKKRKNNKRESAVRRKRKSLSGLSDVNANTSSIDSHMPGKKRKQKRKMEEATLGQQPKNVTTNLIGGSRKYSSTPQTSPNLSCLAYEGKTVYKKRKKIEVLENESAQITSVCTDAKKLKGSSLVIDLQFTSPPVPVDIPDRNKSGNKEELVLFSTNPESCVSQEGPVGRINDNSLSVITKAEASTVLVNEAALENSIGKAAGVHLNNKLAVGMPHNSLGKAAEAHLNTKLAVEQTGLNNNMEKAVEKPLNTKLALGEPRLIDSTEMAAKKALNTKSVVEIPDLNDSSAECNSISTEFDTVNFTSTELKPKQSSLSACSRPIKKTTICWRRKDGGESLGNCLLLQFSPVAYIPSKEDLMTTFYRFGPLKASETQLLKDAGSAQVVFVRSKDAAAAFHSLEQNKFAFGSTLLDYKLHRPSASCPPVEQLMIPAQPAGFMAMPGVTPNQPTGSMAMPGVTPAQSTGFVAMTGVNPAQPTGSKAIPDVTSVQPTGSMAMLGGSPTQPSGSMAVTPTQPILSKPRHGVTPNQPTVSMAEPGVIPTLPTGSIAVPGVTPAQQTGSTVPMLGETPPSLQDMKQKLQMMTSVLENSGSSLCPQMRAKLDSGIKNLMRKVNSRTKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJW4</accession>
    <name>V7BJW4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DUF4283 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G229900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJW4"/>
    <dbReference type="Gramene" id="ESW17323">
        <property type="protein sequence ID" value="ESW17323"/>
        <property type="gene ID" value="PHAVU_007G229900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1924068at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="195"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="253" mass="28908" checksum="010D046C38BCAFAE" modified="2014-02-19" version="1">MVQINEEDYLAGLEDCKNHQLPTPCVKGDFVMVQINEEDYMAGLDDLFSIAKGTGTPLSLDHCTLARSKFFFARVLVDVVLQYDLPLQIMVERKGFALVVDLEYERVSEFCHPWFTKWDMEHSTPNHHIVLTNGIGDDRMLHSIQPEKEVQDAQLSDAQEINNVNDCMHDHNTISPVPDISGLEGKDKVALQDFETGEEHQRKEDDIEESLSDFESERGQQAKNLESEEELLNIQSTEMEMNIRILSIFCCDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BK97</accession>
    <name>V7BK97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Elongin-A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G036000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BK97"/>
    <dbReference type="STRING" id="3885.V7BK97"/>
    <dbReference type="Gramene" id="ESW18382">
        <property type="protein sequence ID" value="ESW18382"/>
        <property type="gene ID" value="PHAVU_006G036000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2821">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LMHIEKC"/>
    <dbReference type="OrthoDB" id="21513at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070449">
        <property type="term" value="C:elongin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006368">
        <property type="term" value="P:transcription elongation by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.3180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010684">
        <property type="entry name" value="RNA_pol_II_trans_fac_SIII_A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47543">
        <property type="entry name" value="OS08G0169600 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47543:SF2">
        <property type="entry name" value="RNA POLYMERASE II TRANSCRIPTION FACTOR SIII SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06881">
        <property type="entry name" value="Elongin_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW18382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="181" mass="21346" checksum="BD1167A83FFB094F" modified="2014-02-19" version="1">MMRRDEFCAPKIPTLVDLCIQKVIDNVRYLGNVGYFDEYLLERILPHCTVDQLMNVEKSTKGRDLSPVTDKLWKKFFEKQYGTNSTNEVIKRMKEKKVSFKWAQLYEAKGKEMAQAENEALDRIKQLYKKEDARKQSRQVRLCTKVSPSSKRRFWGDNGPGYNVSNFKSNIMKKAKIFMKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BLK6</accession>
    <name>V7BLK6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G242700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BLK6"/>
    <dbReference type="SMR" id="V7BLK6"/>
    <dbReference type="STRING" id="3885.V7BLK6"/>
    <dbReference type="Gramene" id="ESW17476">
        <property type="protein sequence ID" value="ESW17476"/>
        <property type="gene ID" value="PHAVU_007G242700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHCDPTE"/>
    <dbReference type="OrthoDB" id="428577at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47725">
        <property type="entry name" value="OS03G0364000 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47725:SF2">
        <property type="entry name" value="UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="103" mass="11892" checksum="3D544B2B0270DC2F" modified="2014-02-19" version="1">MDMYIRVKRSKTTYFIRCKASDKIIDIKQKLQELVDQPTNNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVRPNDFYQARDADGASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMB1</accession>
    <name>V7BMB1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_006G0974000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMB1"/>
    <dbReference type="STRING" id="3885.V7BMB1"/>
    <dbReference type="Gramene" id="ESW19112">
        <property type="protein sequence ID" value="ESW19112"/>
        <property type="gene ID" value="PHAVU_006G0974000g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW19112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="41" mass="4245" checksum="A54A174E95459DC6" modified="2014-02-19" version="1" fragment="single">MEDSAGNNGISANNVAQAIHTALDWASTPDARQNAVAFLDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPF7</accession>
    <name>V7BPF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Acyl carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_006G160800g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Carrier of the growing fatty acid chain in fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the acyl carrier protein (ACP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPF7"/>
    <dbReference type="SMR" id="V7BPF7"/>
    <dbReference type="STRING" id="3885.V7BPF7"/>
    <dbReference type="Gramene" id="ESW19852">
        <property type="protein sequence ID" value="ESW19852"/>
        <property type="gene ID" value="PHAVU_006G160800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1748">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QAPSRIC"/>
    <dbReference type="OrthoDB" id="448946at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000036">
        <property type="term" value="F:acyl carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="entry name" value="ACP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01217">
        <property type="entry name" value="Acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003231">
        <property type="entry name" value="ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044813">
        <property type="entry name" value="ACP_chloroplastic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00517">
        <property type="entry name" value="acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF002148">
        <property type="entry name" value="PRK00982.1-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46153">
        <property type="entry name" value="ACYL CARRIER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46153:SF29">
        <property type="entry name" value="ACYL CARRIER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="ACP-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="11 12" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4 12" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="3 12" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-0934">Plastid</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="Carrier" evidence="13">
        <location>
            <begin position="60"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW19852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="139" mass="14960" checksum="46C71F32BD7EBCAF" modified="2014-02-19" version="1">MASIMQSSMSFVSVSNQALVSGTRISHPSSVSLSIKGRNFPSITLQPRGRRFQFRCAAKPETVKKVCDIVKKQLALSEDSTVTGESKFAALGADSLDTVEIVMGLEEEFGITVEEDSAQSISTVQDAAEMIDKLLESKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BR82</accession>
    <name>V7BR82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GOST seven transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G212300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BR82"/>
    <dbReference type="SMR" id="V7BR82"/>
    <dbReference type="STRING" id="3885.V7BR82"/>
    <dbReference type="Gramene" id="ESW20474">
        <property type="protein sequence ID" value="ESW20474"/>
        <property type="gene ID" value="PHAVU_006G212300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2568">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WIAYEVY"/>
    <dbReference type="OrthoDB" id="19932at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053937">
        <property type="entry name" value="GOST_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009637">
        <property type="entry name" value="GPR107/GPR108-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21229:SF1">
        <property type="entry name" value="GH17801P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21229">
        <property type="entry name" value="LUNG SEVEN TRANSMEMBRANE RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06814">
        <property type="entry name" value="GOST_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="219"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="353"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="398"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="431"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="domain" description="GOST seven transmembrane" evidence="8">
        <location>
            <begin position="215"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="465"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="507"/>
            <end position="520"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="520" mass="58164" checksum="FE93BFBAA404DE42" modified="2014-02-19" version="1">MDSAFARGRSRSVCFAASLVYILLSSIAVTTFASIHIYDHEPFQELGNAYLLAGGSEAIVAAASQGSSIHDGRSYIRFENITFRRPKAAAKARGSVPVHIIIFEAADRNDIGGSAYGGQRAICCTPDLAKMGVCKQGEIIRRPSATDINWPVVLDVQFKGKSVISSLNSQKVSIKKTGMYNLFFVACDPKLKDMVMSGKTIWKNPDGYLPGRMAPLKKFYVFMALAYVCLSIIWFFQYVRFWDDVLQLQHCITAVIALGLFEMILWYFEYVNFNNTGMRPIVLTTWVVTVGAIRKTLSRLLILSVSMGYGVVRPTLGGLTSKVLLLGITYFLASELLNITEYVGTINDVSGRARLLLVIPDAFLDAFLILWIFTSLSKTLEQLQAKRSSVKLDIYRKFSNALAVTVISSVAWIGFEVYFKATDPFNERWQSAWIITAFWDVITFALLCVICYLWGPSQSSQRYAYSEKVGEDSDDEEAQSLTKEKQEGQSEISLARQEKNVGTDGSFDQEDESEEEDKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS85</accession>
    <name>V7BS85_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G017100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS85"/>
    <dbReference type="SMR" id="V7BS85"/>
    <dbReference type="STRING" id="3885.V7BS85"/>
    <dbReference type="Gramene" id="ESW20819">
        <property type="protein sequence ID" value="ESW20819"/>
        <property type="gene ID" value="PHAVU_005G017100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW80">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WHAHSPA"/>
    <dbReference type="OrthoDB" id="1932658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36386">
        <property type="entry name" value="OS06G0683900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36386:SF1">
        <property type="entry name" value="OS06G0683900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="26"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="64"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW20819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="324" mass="36362" checksum="52E1F96AD47C2580" modified="2014-02-19" version="1">MNDIQVWNNAAFDNHGGDTFFPMKTSWSSSESTKENLSPTALNSSPKPKKNTKTKVFALSSDDNRNIDDEIEVLEREITRLTTRLDALRIEKAKRGKRVVGRAVPAKFMEPRPNAAVLRKPEETPKTKVKSVNNNQSAWRRGMSMGPAEIAATPATAQSRRKSCFWKLPEIDEESRAKTVGRVRKKEEFSAVQVQARNMFDREKMKSLCESNKKAVKPGRMVASRYNGGGDVRKRSLPEGGSEVRVKKRWEIPKNGEEEEAVVAAVAAEVMVLPKIKTVKCVNESPRDSGAAKRVAELVGKRPYFSTEEHDVCQILNFAEEEGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSA3</accession>
    <name>V7BSA3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Germin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_006G126200g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Secreted</location>
            <location evidence="2 13">Extracellular space</location>
            <location evidence="2 13">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the germin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSA3"/>
    <dbReference type="SMR" id="V7BSA3"/>
    <dbReference type="Gramene" id="ESW19451">
        <property type="protein sequence ID" value="ESW19451"/>
        <property type="gene ID" value="PHAVU_006G126200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ4A">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANGLACK"/>
    <dbReference type="OrthoDB" id="1921208at2759"/>
    <dbReference type="PhylomeDB" id="V7BSA3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02241">
        <property type="entry name" value="cupin_OxOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000005">
        <property type="entry name" value="Germin-like protein subfamily 1 member 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006045">
        <property type="entry name" value="Cupin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001929">
        <property type="entry name" value="Germin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019780">
        <property type="entry name" value="Germin_Mn-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31238">
        <property type="entry name" value="GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00190">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00325">
        <property type="entry name" value="GERMIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00835">
        <property type="entry name" value="Cupin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="RmlC-like cupins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00725">
        <property type="entry name" value="GERMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 13" id="KW-0052">Apoplast</keyword>
    <keyword evidence="7 12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 10 13" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0964">Secreted</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5019616848" description="Germin-like protein" evidence="13">
        <location>
            <begin position="21"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin type-1" evidence="14">
        <location>
            <begin position="58"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>oxalate</name>
            <dbReference type="ChEBI" id="CHEBI:30623"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="12">
        <location>
            <begin position="29"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601929-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU366015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW19451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="214" mass="22928" checksum="6E6BDD77EA1BA14A" modified="2014-02-19" version="1">MANPLFFLTLLALSLSLVLATAITIQDFCVADSKEKVLANGLACKDPKLVEVNDFFFSGLHIAGNTTNPVGSKVTPVFATQLPGLNTLDISIARIDYAPWGTNPPHTHPRATEVLTVLQGTLEVGFVTSNPENLHFRKVLQTGDVFVFPTGLIHYQRNVGNGHAVAIAALSSQNPGVITIGNAVFGSTPDIDSDVLVTAFHLDKTTVNYLQSKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7BSL5</accession>
    <name>V7BSL5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G173800g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BSL5"/>
    <dbReference type="SMR" id="V7BSL5"/>
    <dbReference type="Gramene" id="ESW20013">
        <property type="protein sequence ID" value="ESW20013"/>
        <property type="gene ID" value="PHAVU_006G173800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VEPDMSK"/>
    <dbReference type="OrthoDB" id="689350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044577">
        <property type="entry name" value="HIPP4/7/8/17/18/19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46195">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46195:SF17">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="3" id="KW-0636">Prenylation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="5">
        <location>
            <begin position="13"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="5">
        <location>
            <begin position="103"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW20013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="223" mass="25588" checksum="E05472FD8406CC17" modified="2014-02-19" version="1" fragment="single">EEKKENIEKKEVEKAIILKALVHCEGCSDKICKCLKGLPGVKEVHVDKEHQRVTVKGEAVNNPSKVLETLQKKYSKNVELISPKPKPENQQKNIQDKKEQVKIKTVVLNMSMNCEGCVRDVKKNLEKIEGVDSVEVDKENSRVTVKGTMEGAKLVEAMKKKLRKHAEIMKEESRREPRKEVNDVEKVVRDPIVIYTYPPQYATQHMYPNQTFNDENVFACSIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BUP0</accession>
    <name>V7BUP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G013200g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BUP0"/>
    <dbReference type="SMR" id="V7BUP0"/>
    <dbReference type="STRING" id="3885.V7BUP0"/>
    <dbReference type="Gramene" id="ESW20770">
        <property type="protein sequence ID" value="ESW20770"/>
        <property type="gene ID" value="PHAVU_005G013200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004713">
        <property type="term" value="F:protein tyrosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000604">
        <property type="entry name" value="Proline-rich receptor-like protein kinase PERK8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000849">
        <property type="entry name" value="receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008266">
        <property type="entry name" value="Tyr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020635">
        <property type="entry name" value="Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989:SF8">
        <property type="entry name" value="INACTIVE PROTEIN KINASE SELMODRAFT_444075-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47989">
        <property type="entry name" value="OS01G0750732 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00219">
        <property type="entry name" value="TyrKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00109">
        <property type="entry name" value="PROTEIN_KINASE_TYR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="4">
        <location>
            <begin position="314"/>
            <end position="580"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW20770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="693" mass="78392" checksum="8C620B9E34966AC0" modified="2014-02-19" version="1">MTTETQRVVVIQDASRGVSSKAILGALEKFSVKAGDQLIIVAILDWISSPMGYMVRLDTSSTNQKIIAKWHTKKKKEYLMNEKIKEISNYCKSNEIGFQIEVLVGPTAEVASNAAKDFQATTLILFRQIHKDLKYFMRQHPCGMYRITSDNSIERLKDPKSTSSTKSLVDRQENVSYKEMFPGSEEEERSLQMSRSSSSDMLTSFGVSSQWSTELSTSSFRSLRYGQQYQEGNLYSNIEQETAGNQSLFHISENEEINQLKENKRENYGRNNEKSHTEEEFANPLCSVCNNRRPKVGLKRDFTYAELCAATKGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKNAGFQGEKEFKSEVNALSKARHENVVVLLGSCSEGTNRLLVYEYVCNGSLDQHLSEHSRSPLSWEDRINIAIGAAKGLLYLHKNNMIHRDVRPNNILITHDHRPLLGDFGLARNQNEDSIHSTEVVGTLGYLAPEYAEHGKVSSKTDVYSFGVVLLQLITGMRTTDRRLEGRSLVGWARPLLRERNYPDLIDERIIRSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSPARSDSIYTASDSDESEDEMKESFKFEDELIAHSHSSESIDSNSISLMMHMNLRQPPSPPIQSIPLSSSCFHDESTSNGEAMEISKSNEVSQLLDARLSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVL6</accession>
    <name>V7BVL6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Acetyltransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G037900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVL6"/>
    <dbReference type="SMR" id="V7BVL6"/>
    <dbReference type="Gramene" id="ESW21058">
        <property type="protein sequence ID" value="ESW21058"/>
        <property type="gene ID" value="PHAVU_005G037900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT1Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VWISITR"/>
    <dbReference type="OrthoDB" id="1862401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="entry name" value="Chloramphenicol acetyltransferase-like domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051283">
        <property type="entry name" value="Sec_Metabolite_Acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896">
        <property type="entry name" value="FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31896:SF12">
        <property type="entry name" value="HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02458">
        <property type="entry name" value="Transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="464" mass="51777" checksum="B91426BC64268CA5" modified="2014-02-19" version="1">MGTPAVEHISECFVKPHPCNNFPNQIYNLTPWDIAMLSVSYIQKGLLFSKPATLENQQHFMENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQHPPSYTVSVDCSNSDGARFIHAALDATISDLLSPLDTPSIFHSFFDHHKALNHDGHTMPLLSIQVTELLDGVFIGCSMNHSIADGTSFWNFFNTWSQIFQAQSQAESHEHDAPISHQPLRLFPNNSGPPISLPFKHHDEFIKRFEAPLLRERVFHFSAESIAKLKAKANSEANTTRISSFQSLSAFVWRSITRARSPPSEQKTSCRLMANIRSRMEPPLAEEYFGNCIHVLRAETTTGELLENGLGWAAWKLHVAVTNLNEVVLEFLERWLESPLIIQTGRFSDSCSVLTASSPRFNMYGSEFGMGKAVAVRSGCANKFDGKLTSYAGREGGGSIDLEVCLLPHTMSALESDKDFMNAVSVFENGHKGTDLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BVR4</accession>
    <name>V7BVR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Vacuolar protein sorting-associated protein 62</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_005G043000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BVR4"/>
    <dbReference type="SMR" id="V7BVR4"/>
    <dbReference type="Gramene" id="ESW21118">
        <property type="protein sequence ID" value="ESW21118"/>
        <property type="gene ID" value="PHAVU_005G043000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQRS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="188042at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009291">
        <property type="entry name" value="Vps62"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48152:SF3">
        <property type="entry name" value="DUF946 FAMILY PROTEIN (DUF946)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48152">
        <property type="entry name" value="F1C9.34 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06101">
        <property type="entry name" value="Vps62"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW21118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="517" mass="57556" checksum="2278B9EBCE82E2BA" modified="2014-02-19" version="1">MVGSHGQFKKKKSLPIETTFNLPTDIPVWPPGGGFASGIIDLGGGLLVSQITTFNKVWTTFEGGPNNLGATFFEPTGLSQGFFMLGCYCQPNNMPLHGWVLVGKDNSSISNGALAKPVDYKLVWTTSSLKIKQDGEGYIWLPIAPDEYKPVGYVVTTSQEKPSLDKIRCVRSDLTDECTTYHSKKLWRTQNKRFNVFDVRPMKRSIEAQGVSVGTFLAQSGGGANSKPLPIVCLKNTKAKFSYMPNFSQVEAMIKAYSPYMYLHPMEEYLPSSVDWFFTNGAVLIEKRKGVIRESAIEPNGSNLPQGGSNDEEVTYWLDLPLDETKRVKVKQGDLASSQAYVHVKPMMGGTFTDIAMWVFYPFNGGAKAKVACTNIPLRTKGEHVGDWEHVTLRVSNLNGELWKVYFSQHSRGKWVDASELEFQNGNRVVAYSSLHGHALFPKPGVVMQGMRRFGVRNDAAKSDAVMDMANGFEIVGAEYLGSEIREPPWLNYWMNWGPKNGPKGPKQKDSWKGDER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWH0</accession>
    <name>V7BWH0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_005G066700g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Ole e I family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWH0"/>
    <dbReference type="SMR" id="V7BWH0"/>
    <dbReference type="Gramene" id="ESW21390">
        <property type="protein sequence ID" value="ESW21390"/>
        <property type="gene ID" value="PHAVU_005G066700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2YZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IMEENDT"/>
    <dbReference type="OrthoDB" id="1392797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006041">
        <property type="entry name" value="Pollen_Ole_e1_allergen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614:SF20">
        <property type="entry name" value="POLLEN PROTEIN OLE E I-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31614">
        <property type="entry name" value="PROTEIN DOWNSTREAM OF FLC-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01190">
        <property type="entry name" value="Pollen_Ole_e_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754783" evidence="3">
        <location>
            <begin position="23"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW21390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="162" mass="17942" checksum="531683DCF6B9C82E" modified="2014-02-19" version="1">MARSFVVVALFVSVVCFSSALARKSPEKFFVEGKIYCDPCQFAFESRLSFALSGVNVTLKCIKEENDIVSYLKNSTTDANGMYNIPVRGDHEEEICMVVADPPNEGQCKEAMPNKSDRIILTKNMGAASMTRYVNPLGFMTQTTDSQCFSVVHELGLDNLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWT8</accession>
    <name>V7BWT8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NAD-dependent epimerase/dehydratase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G034800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWT8"/>
    <dbReference type="SMR" id="V7BWT8"/>
    <dbReference type="STRING" id="3885.V7BWT8"/>
    <dbReference type="Gramene" id="ESW21026">
        <property type="protein sequence ID" value="ESW21026"/>
        <property type="gene ID" value="PHAVU_005G034800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1502">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WRDYTYT"/>
    <dbReference type="OrthoDB" id="2735536at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08958">
        <property type="entry name" value="FR_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000085">
        <property type="entry name" value="Dihydroflavonol reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050425">
        <property type="entry name" value="NAD(P)_dehydrat-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366:SF852">
        <property type="entry name" value="CINNAMOYL-COA REDUCTASE CAD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366">
        <property type="entry name" value="NAD DEPENDENT EPIMERASE/DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="4">
        <location>
            <begin position="9"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW21026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="35826" checksum="80B994857CDCD6A8" modified="2014-02-19" version="1">MSTGAGQVVCVTGASGFIASWLVKFLLQRGYTVKATVRDPNNSSKVDHLLNLEGAKERLHLVKANLLEEGSFDAAVEGSHAVFHTASPFFNNAKDPQTELLDPALKGTLNVLKSCVNSPTLKRVVLTSSIAAVSFNYRPKTPDVVVDETWYSDPEYCKENGLWYNLSKTLAEDAAWKFVKENNIDLVTVNPALVSGPLLQPELNTSASVVLNLVNGAQTFKNDIVGWVDVRDVAMAHILAYESASANGRYLLVDRVAHFSEVVKILRDLYPTLQIPEKCEDDKPYVPIFQVSKEKAKSLGLEFTPLEVSLKDTVESLKEKNFLKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX28</accession>
    <name>V7BX28_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G042500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX28"/>
    <dbReference type="STRING" id="3885.V7BX28"/>
    <dbReference type="Gramene" id="ESW21111">
        <property type="protein sequence ID" value="ESW21111"/>
        <property type="gene ID" value="PHAVU_005G042500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1II">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LFMISYH"/>
    <dbReference type="PhylomeDB" id="V7BX28"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33306">
        <property type="entry name" value="EXPRESSED PROTEIN-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33306:SF5">
        <property type="entry name" value="OXIDOREDUCTASE_TRANSITION METAL ION-BINDING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="124" mass="13886" checksum="213B1D7F537C87F7" modified="2014-02-19" version="1">MAYPSSQNSQPALPLHLCLFLLTLCMLLGFSWYSSYEPIMESFMDEVKLVLMVSPLLLLLVVHFLCNYGGGGGVLSSLVPLPERESLHRAGGTPWGVGFVLVLLLFMVSYQSSFQERWFPLLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY02</accession>
    <name>V7BY02_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">cinnamoyl-CoA reductase</fullName>
            <ecNumber evidence="13">1.2.1.44</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Caffeoyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">Coumaroyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="15">Feruloyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">Sinapoyl-CoA reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_005G182100g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(E)-4-coumaraldehyde + NADP(+) + CoA = (E)-4-coumaroyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64652"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28353"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:85008"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="9">
            <dbReference type="Rhea" id="RHEA:64654"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>(E)-caffeyl aldehyde + NADP(+) + CoA = (E)-caffeoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:74867"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28323"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:87136"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="11">
            <dbReference type="Rhea" id="RHEA:74869"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(E)-cinnamaldehyde + NADP(+) + CoA = (E)-cinnamoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10620"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16731"/>
            <dbReference type="ChEBI" id="CHEBI:57252"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="8">
            <dbReference type="Rhea" id="RHEA:10622"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>(E)-coniferaldehyde + NADP(+) + CoA = (E)-feruloyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64648"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16547"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:87305"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="12">
            <dbReference type="Rhea" id="RHEA:64650"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(E)-sinapaldehyde + NADP(+) + CoA = (E)-sinapoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64656"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:27949"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57393"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="10">
            <dbReference type="Rhea" id="RHEA:64658"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Aromatic compound metabolism; phenylpropanoid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.44" evidence="13"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY02"/>
    <dbReference type="SMR" id="V7BY02"/>
    <dbReference type="STRING" id="3885.V7BY02"/>
    <dbReference type="Gramene" id="ESW22799">
        <property type="protein sequence ID" value="ESW22799"/>
        <property type="gene ID" value="PHAVU_005G182100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1502">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPECTGQ"/>
    <dbReference type="OrthoDB" id="2735536at2759"/>
    <dbReference type="PhylomeDB" id="V7BY02"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016621">
        <property type="term" value="F:cinnamoyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009809">
        <property type="term" value="P:lignin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd08958">
        <property type="entry name" value="FR_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000199">
        <property type="entry name" value="Cinnamoyl-CoA reductase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050425">
        <property type="entry name" value="NAD(P)_dehydrat-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366:SF404">
        <property type="entry name" value="CINNAMOYL-COA REDUCTASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366">
        <property type="entry name" value="NAD DEPENDENT EPIMERASE/DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="18">
        <location>
            <begin position="14"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00050640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00051133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00051239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00052462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00067006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00075244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00077069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00081990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00082321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW22799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="337" mass="37007" checksum="F1270A2F75E2C4DA" modified="2014-02-19" version="1">MPSADSSSPSSQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKEFEGASQRLTLHKVDLLDLHSVRSVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAEEAKVRRVVFTSSIGAVYMDPKRSIDLVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKSSASGRYLCAESSLHRGELVEILAKYFPEYPVPTKCSDEKNPRAKPYIFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPVPAQQEDSTTVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYQ2</accession>
    <name>V7BYQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G016300g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYQ2"/>
    <dbReference type="STRING" id="3885.V7BYQ2"/>
    <dbReference type="Gramene" id="ESW23074">
        <property type="protein sequence ID" value="ESW23074"/>
        <property type="gene ID" value="PHAVU_004G016300g"/>
    </dbReference>
    <dbReference type="OMA" id="HEWDEET"/>
    <dbReference type="OrthoDB" id="1435207at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="CDD" id="cd22160">
        <property type="entry name" value="F-box_AtFBL13-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053781">
        <property type="entry name" value="F-box_AtFBL13-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006566">
        <property type="entry name" value="FBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050232">
        <property type="entry name" value="FBL13/AtMIF1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055411">
        <property type="entry name" value="LRR_FXL15/At3g58940/PEG3-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900">
        <property type="entry name" value="F-BOX/RNI SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31900:SF30">
        <property type="entry name" value="SUPERFAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08387">
        <property type="entry name" value="FBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24758">
        <property type="entry name" value="LRR_At5g56370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="1">
        <location>
            <begin position="5"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="F-box/LRR-repeat protein 15/At3g58940/PEG3-like LRR" evidence="3">
        <location>
            <begin position="110"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="FBD" evidence="2">
        <location>
            <begin position="247"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF24758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="327" mass="37384" checksum="D63DC764ED6D2174" modified="2014-02-19" version="1">MADRISNFPDSILCYVLSFLSTKEAVATSVLSKRWNLLWRSVPSLDFVYPGGDEYVDEVACFFQSLYSFLLFRDKRQLFHRFRLKCFCFCNDYIFETCIKAAMRISGRLQHLDLNLPPVIAVPSVVFSCQTLVVLKLANLALKNISFVNFPLLKILHLNSVTFSEGSDLLQQFLSGSPNLEDLKVKNFSANAAEKFNRFSKLVRAEVDSHLVPLENVKNVEVLVLDGVCDFPFARDLGGKVLAYTQPVPTCISLHLKTCCIKEYSGFVFEFLFAKYIMQNAKYLRTMKVCLNRCSMPYNYPFFYDVMVSDLSRCIKSSDTCTLLFNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C1U6</accession>
    <name>V7C1U6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DM2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G038900g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C1U6"/>
    <dbReference type="SMR" id="V7C1U6"/>
    <dbReference type="STRING" id="3885.V7C1U6"/>
    <dbReference type="Gramene" id="ESW23343">
        <property type="protein sequence ID" value="ESW23343"/>
        <property type="gene ID" value="PHAVU_004G038900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SGEM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TSELCTF"/>
    <dbReference type="OrthoDB" id="1164142at2759"/>
    <dbReference type="PhylomeDB" id="V7C1U6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.245.10">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036885">
        <property type="entry name" value="SWIB_MDM2_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003121">
        <property type="entry name" value="SWIB_MDM2_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02201">
        <property type="entry name" value="SWIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47592">
        <property type="entry name" value="SWIB/MDM2 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DM2" evidence="2">
        <location>
            <begin position="28"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="106"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW23343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="132" mass="14460" checksum="DDE6213D079FE83C" modified="2014-02-19" version="1">MGSLGRRSMSTVAKAVAEITGTGNTKIRKSSSELCTFLGIPRHSRSEIALILSKFIKLYNFRSPGIKKDKIWEQNLQTLLRGRNTVGFPEIAKILSSEFSQGAINVKDNNMDSSVDSTKGKGSQKKGKPSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C266</accession>
    <name>V7C266_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G049600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C266"/>
    <dbReference type="SMR" id="V7C266"/>
    <dbReference type="STRING" id="3885.V7C266"/>
    <dbReference type="Gramene" id="ESW23468">
        <property type="protein sequence ID" value="ESW23468"/>
        <property type="gene ID" value="PHAVU_004G049600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0143">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EDWACEL"/>
    <dbReference type="OrthoDB" id="288590at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="entry name" value="B-lactam Antibiotic, Isopenicillin N Synthase, Chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050231">
        <property type="entry name" value="Iron_ascorbate_oxido_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47990">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0408">Iron</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="4">
        <location>
            <begin position="147"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW23468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="299" mass="33855" checksum="A15F04979AE60F96" modified="2014-02-19" version="1">MEASVPVVDFEKLSEGEELKKLREACEKCGCFRIINHSIPKTLMSEMKSVVKYVHDLPLEIKMRNKSIIPDSGYVPPFPTSPLYEGMGIYDMNKSPQALEEFFSQLDLPTYHRQIVETYGEAIHDLASTVSQKMAKSLGVVGVDFKDWPFILRTIKYSFTQENIGEMGVQLHSDTGFMTLLQDDEAVSGLELLDDSGLFKAVPPKSGSFLCIIGDVGQVWSNGKFWNVRHHVICKEIGTRYSFGAFMLAPRDGNVEAPTTLVELDNGRCYRPFKYEDLREFRITTGKRKGEVLDQYRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7C290</accession>
    <name>V7C290_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">F-box associated beta-propeller type 1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G051900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C290"/>
    <dbReference type="SMR" id="V7C290"/>
    <dbReference type="STRING" id="3885.V7C290"/>
    <dbReference type="Gramene" id="ESW23493">
        <property type="protein sequence ID" value="ESW23493"/>
        <property type="gene ID" value="PHAVU_004G051900g"/>
    </dbReference>
    <dbReference type="OMA" id="ISHHANK"/>
    <dbReference type="OrthoDB" id="1555129at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006527">
        <property type="entry name" value="F-box-assoc_dom_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017451">
        <property type="entry name" value="F-box-assoc_interact_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050796">
        <property type="entry name" value="SCF_F-box_component"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01640">
        <property type="entry name" value="F_box_assoc_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672">
        <property type="entry name" value="BNACNNG10540D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31672:SF13">
        <property type="entry name" value="F-BOX PROTEIN CPR30-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07734">
        <property type="entry name" value="FBA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box associated beta-propeller type 1" evidence="1">
        <location>
            <begin position="116"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="46205" checksum="179BE49708C505DE" modified="2014-02-19" version="1">MYDKFVAQKLGNHLPDDLAFSILFKLPLKSLKRYGCLNKSWALLLENSNFMELFRINFISNQHSYYDDTSHLLCLDQLDKSSLFSLSGRSFQNMEKVNWSKGHCSRYFILGSSSINGILCLYPPNSGTMYLWNPSSGEFKIIPPSPIEYVPDSMDPNFYYHGFGYDCARDDYKVIRNLILFPSVHIEHEPDYEEWDIHGSWEIYSLRSNSWRKPKSDIYIYPWCEEIHKFYLEGMCHWLGNWRESYDDITKKNLVSFNLSNEEWFITPLPPLDIPLEIYDNFNINLVESHLFLLNGSIALISNYYETTTFSISILAEIGKKETWTKLVTLGPLPYLPRPIGIGNMSNILFRTTDGKLAWLDLRTHLVEKLDVNAHRMICQLIVYKENLFPTLGINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2U8</accession>
    <name>V7C2U8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G135700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2U8"/>
    <dbReference type="SMR" id="V7C2U8"/>
    <dbReference type="Gramene" id="ESW24497">
        <property type="protein sequence ID" value="ESW24497"/>
        <property type="gene ID" value="PHAVU_004G135700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MVCANIE"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001079">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At2g17210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000682">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At3g16610"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000309">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015">
        <property type="entry name" value="OS07G0578800 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24015:SF1934">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="115"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="220"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="321"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="422"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="614" mass="67588" checksum="D723DF9433087F67" modified="2014-02-19" version="1">MPLLPSSLASFRRPLYLWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLASIQHGTVLHGHVLKLGFQEDTFVQTALVDMYSKCSHVASARLVFDEMPQRSVVSWNAMVSAYSRVSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSELDSFKFRLQGESIHCCLIKLGIVHTEVSLGNSLMAMYAQFCIMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAFALFNQMQRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEVDSIENLLIAMYAKCGNLTFAKKIFDMIIEKSMLSWTSIIAGYAHSGHPAEALDLFRRMVKTDIRPNGATLAVVLSACADLGSLSMGQEIEEYVFLNGLESDQQVQTSLIHMYSKCGSIKKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVFLACSHSGLVEDGLKYFKSMQKDFRIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVELGELATVKLLEIAPGSSGSYVLMANLYTSSGKWKEAHMMRNLIDGKGLVKECGWSQVEVSDSYHAFAAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7C4J0</accession>
    <name>V7C4J0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G108400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C4J0"/>
    <dbReference type="STRING" id="3885.V7C4J0"/>
    <dbReference type="Gramene" id="ESW24175">
        <property type="protein sequence ID" value="ESW24175"/>
        <property type="gene ID" value="PHAVU_004G108400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S70N">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DENCSKP"/>
    <dbReference type="OrthoDB" id="1936495at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34683:SF2">
        <property type="entry name" value="EXPRESSED PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34683">
        <property type="entry name" value="EXPRESSED PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW24175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="63" mass="6797" checksum="97A8C3F3D5D26262" modified="2014-02-19" version="1">MKKSGLLAAAAASATAVSLSSSSHQDESRIRENTSSQKSTLMEKFAPKFDGLRFIETLVTAHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7C596</accession>
    <name>V7C596_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_004G101000g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C596"/>
    <dbReference type="Gramene" id="ESW24081">
        <property type="protein sequence ID" value="ESW24081"/>
        <property type="gene ID" value="PHAVU_004G101000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EPNERIW"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7C596"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002148">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At2g29760, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000685">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001677">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein At3g49142"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046849">
        <property type="entry name" value="E2_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF373">
        <property type="entry name" value="TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN SUPERFAMILY, DYW DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20430">
        <property type="entry name" value="Eplus_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="97"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="198"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="266"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="336"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="367"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="4">
        <location>
            <begin position="582"/>
            <end position="673"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW24081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="673" mass="76027" checksum="06810C8A6A9556C1" modified="2014-02-19" version="1">MNLIPPLTQQFPKLQALVSSIRKSSGSPQNPVIVLELLGKALDQNPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAACGEPGLARKVFDGIPERNVIFYNVMIRSYVNNHWYNDALLVFRDMVGDGFSPDNYTYPCVLKACSCSDNARIGFQLHGAVFKVGFDLNLFVGNGLIALYGKCGCLLEARRVLDEMPSRDVVSWNSMVAGYVQNMRFDDALEICREMECLRQKPDAGTMASLLPAVTDTSSENISYVEQMFVNLEKKNLVSWNVMLTVYMKNSMPEKAVDLYLQMEKCEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLCPNLLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMLNSGQSPDFIAFVAILSACSHSGLYNEGKFYFKQMTDDYRITPRIEHFACLVDLLGRSGRVDEAYNFIKQMPMKPNERVWGALLSSCRVYSKMDIGLIAADELLQLAPEQSGYYVLLSNIYAKAGRWTEVTAIRSLMKRRKIRKMPGISNVELNNQVHTFLAGDMSHPQSKEIYEELSVLVGKMKELGYVPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTREFPIRITKNLRVCGDCHIAIKLISKIVQREIVVRDTNRFHHFKDGICSCCDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6T7</accession>
    <name>V7C6T7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Terpene cyclase/mutase family member</fullName>
            <ecNumber evidence="4">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G1782001g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the terpene cyclase/mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="4"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6T7"/>
    <dbReference type="STRING" id="3885.V7C6T7"/>
    <dbReference type="Gramene" id="ESW24995">
        <property type="protein sequence ID" value="ESW24995"/>
        <property type="gene ID" value="PHAVU_004G1782001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0497">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YRYRHIS"/>
    <dbReference type="OrthoDB" id="21502at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005811">
        <property type="term" value="C:lipid droplet"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031559">
        <property type="term" value="F:oxidosqualene cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016104">
        <property type="term" value="P:triterpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02892">
        <property type="entry name" value="SQCY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.20:FF:000002">
        <property type="entry name" value="Terpene cyclase/mutase family member"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.20:FF:000022">
        <property type="entry name" value="Terpene cyclase/mutase family member"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032696">
        <property type="entry name" value="SQ_cyclase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032697">
        <property type="entry name" value="SQ_cyclase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018333">
        <property type="entry name" value="Squalene_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002365">
        <property type="entry name" value="Terpene_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01787">
        <property type="entry name" value="squalene_cyclas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764:SF44">
        <property type="entry name" value="LANOSTEROL SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11764">
        <property type="entry name" value="TERPENE CYCLASE/MUTASE FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13243">
        <property type="entry name" value="SQHop_cyclase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13249">
        <property type="entry name" value="SQHop_cyclase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01016">
        <property type="entry name" value="Prenyltransferase_Like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01074">
        <property type="entry name" value="TERPENE_SYNTHASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Squalene cyclase N-terminal" evidence="6">
        <location>
            <begin position="67"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Squalene cyclase C-terminal" evidence="5">
        <location>
            <begin position="339"/>
            <end position="676"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW24995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="685" mass="78126" checksum="AEEA7335016BE93D" modified="2014-02-19" version="1" fragment="single">GVTEKKKVEREEDMNEEVVGRRLRKALRSVSTLQAEDGFWPSDYGGPLFLLPGLVIGLWVTGTLNAVLRREHQSEMRRYLLNHQNEDGGWGLHIEGHSIMFSTALNYVTLRLLGEEVDGGEGSMKKARAWIIDRGGVTHIPSWGKLWLSVLGVYEWSGMKAVPPEIWLLPYNVPFHPGRMWCHTRLVYLPMSYLYGRRFVGPMNPLILSLRKELYTLPYHILDWDQAKNLCPKEDMYHRCPMIQNILWSFVENVGEPLLMHWPYSKLRKKALHCVMQHIHYEDQTTNYVCIGPINKVLNMVCCWVENPNSEAFKCHISRIKDYLWVAEDGMKMQGYNGSQFWDVALSVQAILATNLEDEYGSMLKKANNFIKGSQITANSSGNPSYWYRHISKGGWPFSTTDNGWPSIDCTAEGLKAAILLSNLPHETVGKAVEIEQLYDAVNLILSLQNRNGGFASYELTRSYAWLEKMNPAETFEDIMIDYQCVECTSSAIQGLALFTQRYPTYRRKEIETCIAKAASYIESVQLADGSWYGSWGICYTYGTWFGIKGLVAAGKRYQDDDSIRRGCEFLLSNQQLSGGWGESYVACQKMVYTNLKGNKSHAVNTAWAMLALIEAEQGQRDPIPLHRAAKVLINSQMENGEFPQQEIMGVFNKNCTISYSAYRNIFPIWALGEYRSRILSCPKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6V3</accession>
    <name>V7C6V3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">glutathione transferase</fullName>
            <ecNumber evidence="1">2.5.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G071300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>RX + glutathione = an S-substituted glutathione + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:17792"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="EC" id="2.5.1.18"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the GST superfamily. Tau family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.18" evidence="1"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6V3"/>
    <dbReference type="SMR" id="V7C6V3"/>
    <dbReference type="STRING" id="3885.V7C6V3"/>
    <dbReference type="Gramene" id="ESW25859">
        <property type="protein sequence ID" value="ESW25859"/>
        <property type="gene ID" value="PHAVU_003G071300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0406">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IAKLEMC"/>
    <dbReference type="OrthoDB" id="4951845at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009407">
        <property type="term" value="P:toxin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd03185">
        <property type="entry name" value="GST_C_Tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03058">
        <property type="entry name" value="GST_N_Tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000044">
        <property type="entry name" value="Glutathione S-transferase GSTU6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1050.10:FF:000016">
        <property type="entry name" value="Glutathione S-transferase U9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045074">
        <property type="entry name" value="GST_C_Tau"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045073">
        <property type="entry name" value="Omega/Tau-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11260:SF615">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE U17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11260">
        <property type="entry name" value="GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01152">
        <property type="entry name" value="Main.3:_Omega-_and_Tau-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG00358">
        <property type="entry name" value="Main_(cytGST)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="GST C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0216">Detoxification</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="6">
        <location>
            <begin position="5"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="7">
        <location>
            <begin position="90"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW25859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="224" mass="25464" checksum="308A3BE777B1D3E7" modified="2014-02-19" version="1">MSMKSEVKLLGAWPSPYVLRVRIALNMKSVEYEFHEEKLSSKSQLLLQSNPIYKKIPVLIHKDKPLCESLIIVQYVDDVWSSASPILPSHPYDCAIARFWAVYIDQTLYPTMKSIRGASEEDEKKRLIEEVRKGLALLEDVFKDRSKGKGFYGGDRIGLLDIALGSILGWLRVVETLNGVKLLEQSNTPELLKWAERFSAHAAVKDVMPETERLLEFSKTLVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7D1</accession>
    <name>V7C7D1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G021900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7D1"/>
    <dbReference type="SMR" id="V7C7D1"/>
    <dbReference type="STRING" id="3885.V7C7D1"/>
    <dbReference type="Gramene" id="ESW25273">
        <property type="protein sequence ID" value="ESW25273"/>
        <property type="gene ID" value="PHAVU_003G021900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VALYFPT"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047209">
        <property type="term" value="F:coniferyl-alcohol glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000051">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48046">
        <property type="entry name" value="UDP-GLYCOSYLTRANSFERASE 72E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48046:SF7">
        <property type="entry name" value="UDP-GLYCOSYLTRANSFERASE 72E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="476" mass="51534" checksum="14D2ABC0F6C8856C" modified="2014-02-19" version="1">MVTSKAHAVLLASPGMGHIIPMVELGKRLLTHHSFHVTIFLVTTTTSTSQILQQTSNLSSLNIVHVPPIDVSHKLPPNAPIELRIELTMLHSLPFLRSSITSINTLPPPSALIVDMFGLQALPMARDLSMLTYVYFATSAWFAAVTLYFSVADKKIMETHAESREPLPIPGCKPVRFEDTLEAFLSPGGAMYEACLEAAKESVAADGILVNTWEDLEPAATKALRENGVLGGFTKGEVHAVGPLVKKAEGGKKGAVLQWLDGQPDESVIYVSFGSGGTMSENQMREVALGLELSRQRFVWVVRPPCEGDASGAFFDVASGVDSAVGYLPEGFVERTEGVGVVVSLWAPQAEILEHPATGGFVTHCGWNSVLESVESGVPMVAWPLYAEQRMNAFMVSEQLGVAVRVAEKGGGVVGREEVAEMVRRVMVDEEGVRMRKKVKELKLSGEKALCVFGSSHHSLSQMTKHCQVYVSQNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7D4</accession>
    <name>V7C7D4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">IST1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_004G163100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IST1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7D4"/>
    <dbReference type="SMR" id="V7C7D4"/>
    <dbReference type="STRING" id="3885.V7C7D4"/>
    <dbReference type="Gramene" id="ESW24821">
        <property type="protein sequence ID" value="ESW24821"/>
        <property type="gene ID" value="PHAVU_004G163100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHPPGRA"/>
    <dbReference type="OrthoDB" id="29853at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1260.60:FF:000002">
        <property type="entry name" value="Vacuolar protein sorting-associated protein IST1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.60">
        <property type="entry name" value="Vacuolar protein sorting-associated protein Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005061">
        <property type="entry name" value="Ist1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042277">
        <property type="entry name" value="IST1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12161">
        <property type="entry name" value="IST1 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12161:SF14">
        <property type="entry name" value="REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03398">
        <property type="entry name" value="Ist1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="196"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="362"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="529"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="603"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="228"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="377"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="418"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="531"/>
            <end position="540"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="608"/>
            <end position="617"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="618"/>
            <end position="629"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW24821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="696" mass="78403" checksum="687B5A2128F0B21C" modified="2014-02-19" version="1">MLDGLLGRGFSPKCKSLIKLTKNRIDVIRRKRKATEKFLAKDIADLLANGLDVNAYGRAEGLFVELTLSSCYDFVELSCDFVLKHLSVLQKVSGCPEDLRETISSLMFAAARFSDLPELRELRQIFQDRYESSLECYVNQEFAINLNSKSATLEEKVQLMHDIASEFSIKWDSKAFELRMSKSSGSVQDKIQNGKEALSKGDKNNLRSKSKLPNSGNGLKPLSSYDEVNLKRDSHGSSLPGKEELTSKMSDRGGYWKEGSMLKPIGCSSKDTKEKQIEGGSNLHDSWGNARHVKESQDTSTAGKSPVHARFISKNNVNEPYINHGGILDVDNSERKCQKDETPQVKPSFYNDIPPAYTREEQFERGSNQHGWGSARRVKENHDTVTARKPSGHAGSRSKNNTNEPFAVNGGGLPVDNSETKPQKEETPRVKAFHNNAIPPPYVKPNSKLKNRTHGTDSVSSNIDSDGIPAYPSVREKLEATPTMHRIQSGLDDSERDLQAIRHAARPSKQGHEKEPFVQEDATEVVVLKQKSTRRKHSKSRSSIYDDASSEDTEVVRKQRNRRREEQKRGLQILFDDERHKNDEEERIIDRLLIHYSKKPSINVPEKARRKSRSRHAHQIDKDGSREGPDETPEMVARPPRSVSLPRDETEVVEVKKVFARAVSFQPERSNEARHVHPKLPDCDDLAARIAALRGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7K7</accession>
    <name>V7C7K7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Serine hydrolase FSH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G092900g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7K7"/>
    <dbReference type="STRING" id="3885.V7C7K7"/>
    <dbReference type="Gramene" id="ESW26124">
        <property type="protein sequence ID" value="ESW26124"/>
        <property type="gene ID" value="PHAVU_003G092900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4840">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNGNMSC"/>
    <dbReference type="OrthoDB" id="10034502at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013744">
        <property type="entry name" value="SidJ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31591">
        <property type="entry name" value="UPF0613 PROTEIN PB24D3.06C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31591:SF1">
        <property type="entry name" value="UPF0613 PROTEIN PB24D3.06C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08538">
        <property type="entry name" value="DUF1749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW26124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="94" mass="10740" checksum="AC2634F0FB3E4D43" modified="2014-02-19" version="1">MFSSDLSEDQLRMRLGHMSSTHCQVIFSMGDEYVPDYVDKKALVERLCRAMGGAEKVEIEYGNHSLSNRVEEAVNSIIDFLKREGPKGWDDPWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="62" xmlns="https://uniprot.org/uniprot">
    <accession>V7C7Y8</accession>
    <name>V7C7Y8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Myosin motor domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G002200g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="9">Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class VIII subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C7Y8"/>
    <dbReference type="STRING" id="3885.V7C7Y8"/>
    <dbReference type="Gramene" id="ESW25030">
        <property type="protein sequence ID" value="ESW25030"/>
        <property type="gene ID" value="PHAVU_003G002200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25031">
        <property type="protein sequence ID" value="ESW25031"/>
        <property type="gene ID" value="PHAVU_003G002200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0160">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KYQTFCT"/>
    <dbReference type="OrthoDB" id="6108017at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016459">
        <property type="term" value="C:myosin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000146">
        <property type="term" value="F:microfilament motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007015">
        <property type="term" value="P:actin filament organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030048">
        <property type="term" value="P:actin filament-based movement"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23767">
        <property type="entry name" value="IQCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01383">
        <property type="entry name" value="MYSc_Myo8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.820:FF:000001">
        <property type="entry name" value="Myosin heavy chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.530:FF:000013">
        <property type="entry name" value="Unconventional myosin-XIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.240.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.850.10">
        <property type="entry name" value="Kinesin motor domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.720">
        <property type="entry name" value="Myosin VI head, motor domain, U50 subdomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036961">
        <property type="entry name" value="Kinesin_motor_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057535">
        <property type="entry name" value="MYO1-3_N_SH3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001609">
        <property type="entry name" value="Myosin_head_motor_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036022">
        <property type="entry name" value="MYSc_Myo8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004009">
        <property type="entry name" value="SH3_Myosin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140">
        <property type="entry name" value="MYOSIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13140:SF748">
        <property type="entry name" value="P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00063">
        <property type="entry name" value="Myosin_head"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25369">
        <property type="entry name" value="SH3_VIII-1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00193">
        <property type="entry name" value="MYOSINHEAVY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00242">
        <property type="entry name" value="MYSc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51456">
        <property type="entry name" value="MYOSIN_MOTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51844">
        <property type="entry name" value="SH3_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="3 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="5 11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 10" id="KW-0505">Motor protein</keyword>
    <keyword evidence="6 10" id="KW-0518">Myosin</keyword>
    <keyword evidence="2 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Myosin N-terminal SH3-like" evidence="14">
        <location>
            <begin position="122"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Myosin motor" evidence="13">
        <location>
            <begin position="175"/>
            <end position="869"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Actin-binding" evidence="10">
        <location>
            <begin position="749"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1062"/>
            <end position="1098"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="989"/>
            <end position="1037"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="266"/>
            <end position="273"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00060862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="1194" mass="134606" checksum="5F8F13C85AB3171B" modified="2014-02-19" version="1">MSATSKVTPALHSIKSLPPEFKITSGKVGNRGDAKLKSGDATGSSSPDNGVLVGEVSEEALNHAGDVGLYDEDVAYSRKGVSLEDRSSIADEDLETVPMSFPSVSMSSRERRWSDTTPYSSKKKLQSWFQLPNGNWELGKLITTSGNESIISLSDGRVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIENPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCNSSSELTFVMHQLSQRLRLLGGDTCMSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRQSNCYSITGINDAEEFRTVMEALDVVHIGKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFHVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDKTFANKLKQHLNSNSCFKGERDQAFTVHHYAGQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFLLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHQARRSLKELQGGICTLQSLIRGNKTRKEYSALVKRHRAAVIIQKRVKAVFARNRMKTISDAATVIQAVIRGWLVRRCSGNIGFLKSGDMKMKDSDEVVVKASFLAELQRRVLKAEAALREKEDENDIIRQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDVGGNHRRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLSPDQELRRLKQMFEAWKKDYGTRLRETKVILNKLGNEDGALEKMKKKWWGRRNSTRIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C8D7</accession>
    <name>V7C8D7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Radical SAM core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G052100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C8D7"/>
    <dbReference type="SMR" id="V7C8D7"/>
    <dbReference type="Gramene" id="ESW25628">
        <property type="protein sequence ID" value="ESW25628"/>
        <property type="gene ID" value="PHAVU_003G052100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV91">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WAQHVDE"/>
    <dbReference type="OrthoDB" id="538249at2759"/>
    <dbReference type="PhylomeDB" id="V7C8D7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030488">
        <property type="term" value="P:tRNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01335">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.70:FF:000161">
        <property type="entry name" value="Dual-specificity RNA methyltransferase RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.150.530:FF:000005">
        <property type="entry name" value="Radical SAM superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027492">
        <property type="entry name" value="RNA_MTrfase_RlmN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004383">
        <property type="entry name" value="rRNA_lsu_MTrfase_RlmN/Cfr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058240">
        <property type="entry name" value="rSAM_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00048">
        <property type="entry name" value="rRNA_mod_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="23S RRNA METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544:SF9">
        <property type="entry name" value="RADICAL SAM SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00275">
        <property type="entry name" value="adenosine_C2_methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01062">
        <property type="entry name" value="methyltransferase_(Class_A)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102114">
        <property type="entry name" value="Radical SAM enzymes"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="8" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="12">
        <location>
            <begin position="174"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW25628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="440" mass="49029" checksum="072124A0CD2CF71A" modified="2014-02-19" version="1">MRRVMAIGAVANSTLLVSSKPNRFSFSLTKTSPFLISLLSPRLRRFLSVSSLTADHHNLSDFGNGDGVGISSQGSKALLKGMTYPDLEKWVYSHGYRPGQAMMLWKRMYGNNIWAQHVDELEGLNKDFKKMLSENAEFKALALKEIHTASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIAEQAVFARRLLTDEVGSITNVVFMGMGEPLHNIDNVITAANIMVDEQGLQFSPRKVTVSTSGLVPQLKRFLHESNCSLAVSLNATTDELRNWIMPINRKYKLDLLLQTLREELRFKNNYKVLFEYVMLEGINDSDGDADRLIELVKGIPCKINLISFNPHSGSFFRPTKEERMIEFRNTLARAGLTVLLRPSRGDDQMAACGQLGKPGTIQAPLLRVPDQFQMAIGTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9U0</accession>
    <name>V7C9U0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Gluconokinase</fullName>
            <ecNumber evidence="3 9">2.7.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G053900g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>D-gluconate + ATP = 6-phospho-D-gluconate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19433"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18391"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58759"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Carbohydrate acid metabolism; D-gluconate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the gluconokinase GntK/GntV family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.12" evidence="3 9"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9U0"/>
    <dbReference type="SMR" id="V7C9U0"/>
    <dbReference type="STRING" id="3885.V7C9U0"/>
    <dbReference type="Gramene" id="ESW25651">
        <property type="protein sequence ID" value="ESW25651"/>
        <property type="gene ID" value="PHAVU_003G053900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3354">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HFIYLRA"/>
    <dbReference type="OrthoDB" id="275177at2759"/>
    <dbReference type="UniPathway" id="UPA00792"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046316">
        <property type="term" value="F:gluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02021">
        <property type="entry name" value="GntK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000522">
        <property type="entry name" value="Gluconokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006001">
        <property type="entry name" value="Therm_gnt_kin"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01313">
        <property type="entry name" value="therm_gnt_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43442">
        <property type="entry name" value="GLUCONOKINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43442:SF3">
        <property type="entry name" value="GLUCONOKINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13671">
        <property type="entry name" value="AAA_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="193" mass="21781" checksum="98040A5F54CB7E44" modified="2014-02-19" version="1">MASNHGAVIVVMGVCGAGKTTIGRSLEKEMQYKYLDADDFHSELNKEKMRMGIPLTDEDRMPWLEAMRDVINEYLDNKKGLILGCSALKNQYREMLRSGYPAYKWGTYASPVNFILLDAPAEVLSVRVKARAAEGKHYMPASLLQSQIDLLQVDHCEGIHKVDATLIPQAIVNTILNMLHFQGCFHHDCIEFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAQ7</accession>
    <name>V7CAQ7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Tropinone reductase-like 3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G082700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAQ7"/>
    <dbReference type="SMR" id="V7CAQ7"/>
    <dbReference type="STRING" id="3885.V7CAQ7"/>
    <dbReference type="Gramene" id="ESW25996">
        <property type="protein sequence ID" value="ESW25996"/>
        <property type="gene ID" value="PHAVU_003G082700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0725">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WEVANVI"/>
    <dbReference type="OrthoDB" id="1669814at2759"/>
    <dbReference type="PhylomeDB" id="V7CAQ7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000084">
        <property type="entry name" value="Short-chain dehydrogenase reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF005559">
        <property type="entry name" value="PRK07231.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43943">
        <property type="entry name" value="DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43943:SF2">
        <property type="entry name" value="DEHYDROGENASE_REDUCTASE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13561">
        <property type="entry name" value="adh_short_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW25996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="252" mass="26648" checksum="A833158018692822" modified="2014-02-19" version="1">MVKSKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRRQQNVDAAAEKLRAKGIEVLGVVCHVSNPQQRKDLIEKTVQKYGRIDVVVSNAAANPSVDSILQTKDSVLDKLWEINVKATILLLKDAVPHLQKGSSVVIISSIAGYNPPPSLAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTNFASFLTTNDAVRKELERKTFLGRLGTTEDMAAATAFLASDDASYITGETIVVAGGTPSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CB37</accession>
    <name>V7CB37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Glucose/Sorbosone dehydrogenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_003G194600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the PQQ oxidoreductase GdhB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CB37"/>
    <dbReference type="SMR" id="V7CB37"/>
    <dbReference type="STRING" id="3885.V7CB37"/>
    <dbReference type="Gramene" id="ESW27354">
        <property type="protein sequence ID" value="ESW27354"/>
        <property type="gene ID" value="PHAVU_003G194600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQKP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SCCNSKD"/>
    <dbReference type="OrthoDB" id="10266706at2759"/>
    <dbReference type="PhylomeDB" id="V7CB37"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="2.120.10.30:FF:000067">
        <property type="entry name" value="HHIP-like 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="entry name" value="TolB, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012938">
        <property type="entry name" value="Glc/Sorbosone_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH_b-prop"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19328">
        <property type="entry name" value="HEDGEHOG-INTERACTING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19328:SF13">
        <property type="entry name" value="HIPL1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07995">
        <property type="entry name" value="GSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="Soluble quinoprotein glucose dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0634">PQQ</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757569" description="Glucose/Sorbosone dehydrogenase domain-containing protein" evidence="11">
        <location>
            <begin position="24"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="domain" description="Glucose/Sorbosone dehydrogenase" evidence="12">
        <location>
            <begin position="263"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00061483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW27354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="695" mass="75497" checksum="7A0D9593F5BA19A3" modified="2014-02-19" version="1">MKGVFPISFMLSCFLLLLDSSTALPLCLHSERPFTLNTTIGFCPYNGSTCCHSTEDEGIQKQFQLMNASDPGCASILKSILCARCDPFSAELFTVQSTPRSVPVLCNSTIPGNSSQSKAAVQDFCSEVWDTCQAVSIINSPFSPSLQGQAGGTPGNNANATKLTELWQSKTDFCNAFGGASNSESVCFEGEPVELNNTRTPMNTPHGLCLEKVGDGSYLNMVAHPDGSNRAFFSSQMGKVWLATIPDEGSGGQLELDVSSPFVDLTDQVYSDTQLGMMGMAFHPNFTNNGRFFASFNCDKDQWSGCNGVCSCNSNVDCDPSKMGNENGVQPCQYQAVIAEYTANGTASPPSSLSAKPVEVRRIFTMGLPFISQHGGQILFGPNDGYLYFMMGDGGGSGDPYNFAQNKKSLLGKIMRLDINNIPSASEISKLGLWGSYSIPKDNAFSEDKDLQPEIWALGLRNPWRCSFDSERPSYFFCADAGQDLYEEVDLITKGGNYGWRVYEGPYLFTPTESPGGNTSLNSINPILPISGYNHSEVNKNEESASVTGGYVYRSRTDPCMYGRYLYTDLYAGAIWTAIEDPQNSGNFSTTRIPFCCAHDSPIQCDSVPGSSLPALGYIFSFGEDNNKDVYILASTGVYRVARPSRCSYTCSLEKATTTPPSSPSPSHSSCCSNFFSGYLFLHLSSFLLLYIDFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7CCK9</accession>
    <name>V7CCK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Retrotransposon gag domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G172600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CCK9"/>
    <dbReference type="SMR" id="V7CCK9"/>
    <dbReference type="Gramene" id="ESW27088">
        <property type="protein sequence ID" value="ESW27088"/>
        <property type="gene ID" value="PHAVU_003G172600g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436917at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="171" mass="19834" checksum="FD3BCD9812D4CB8A" modified="2014-02-19" version="1">MPTSKSEEKIDFILRLLQSQRTFQEAMNIRMTNLETQIAQVGKTAKNTLQYFTRRSLKLDMPRFDGSKPLAWIFKIKQFFDYHRTPNDQRLQLVSFSMEGETLACLRGSFRKDFHKEALFKLCQTSTVRGYQYFFELLANRTVGLPPSSLVASFQDSKRGAGISTDLSRKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CDV0</accession>
    <name>V7CDV0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein NPG1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G280300g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CDV0"/>
    <dbReference type="SMR" id="V7CDV0"/>
    <dbReference type="STRING" id="3885.V7CDV0"/>
    <dbReference type="Gramene" id="ESW28362">
        <property type="protein sequence ID" value="ESW28362"/>
        <property type="gene ID" value="PHAVU_003G280300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4162">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RTERWST"/>
    <dbReference type="OrthoDB" id="29013at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043376">
        <property type="entry name" value="NPG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44102">
        <property type="entry name" value="PROTEIN NPG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44102:SF5">
        <property type="entry name" value="PROTEIN NPG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW28362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="3">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="676" mass="74806" checksum="820FF21C98CDC25A" modified="2014-02-19" version="1">MEFEKNGSVTIREICGNGSCMKVTELEAKLDAGNVEEAEATLRNGLSISSEEAKALLGKLEYQRGNVENAFRVFDGIDLQPIIQQLQTSLSDKTPAKNTLTFEAIYLKAKCLQKLNKCTEAIDGCKSVLDAVEKTYSQGKVDTQGDNKLQEIVSHVVELLPELWKETGCYDEALSAYRNALLGQWNLDNEFCARIQKALAVFLLYSEVEASPPNKTDGSYVPKNNMEEAVLLLLIILRNFVLGKIKWDPSIMEHLVFTLSTCGETSILAKQFEELTPGTYQRIDRWIFLALCNSGAGENNTALNLLRMSLHKHERPDDLIALLLAARICSEDPHLGAEGAGYAQRAVNNAQGLDGHLKGVGLRMLGLCQGIQATVSSSDHERSELQSEALKSLEKAIRLEQNNADLIFELAIQYAMHRNLSVALSCAKQFFDKTGGSTLKGWRLLALVLSAQKRFTEAEVVIDAALDETAKWEQGPLLRLKAKLKNSQLRPMDAIEIYRYVLALVQAQKKSPGPPKQGSQVDDAKINELEVWHGLANLYANLSHWKDAEICLQKARELKEYSPATTHTEAIMFEGRGENLEALTATLNAVLFEPNYVPSKILMASLILKIGFSAAASVARCLLCDALRIEPTNRMAWYYLGLTHKADGRITDAADCFQAASLLEESDPIETFSSMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7CEH1</accession>
    <name>V7CEH1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">L-lactate dehydrogenase</fullName>
            <ecNumber evidence="3 8">1.1.1.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_003G219400g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(S)-lactate + NAD(+) = pyruvate + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23444"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16651"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Fermentation; pyruvate fermentation to lactate; (S)-lactate from pyruvate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LDH/MDH superfamily. LDH family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.27" evidence="3 8"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CEH1"/>
    <dbReference type="SMR" id="V7CEH1"/>
    <dbReference type="STRING" id="3885.V7CEH1"/>
    <dbReference type="Gramene" id="ESW27640">
        <property type="protein sequence ID" value="ESW27640"/>
        <property type="gene ID" value="PHAVU_003G219400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1495">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EWDLDDY"/>
    <dbReference type="OrthoDB" id="5405561at2759"/>
    <dbReference type="PhylomeDB" id="V7CEH1"/>
    <dbReference type="UniPathway" id="UPA00554">
        <property type="reaction ID" value="UER00611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004459">
        <property type="term" value="F:L-lactate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006089">
        <property type="term" value="P:lactate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05293">
        <property type="entry name" value="LDH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000018">
        <property type="entry name" value="Malate dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="entry name" value="Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00488">
        <property type="entry name" value="Lactate_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011304">
        <property type="entry name" value="L-lactate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018177">
        <property type="entry name" value="L-lactate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01771">
        <property type="entry name" value="L-LDH-NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43128">
        <property type="entry name" value="L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43128:SF23">
        <property type="entry name" value="L-LACTATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="LDH C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00064">
        <property type="entry name" value="L_LDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0520">NAD</keyword>
    <keyword evidence="4 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactate/malate dehydrogenase N-terminal" evidence="9">
        <location>
            <begin position="39"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Lactate/malate dehydrogenase C-terminal" evidence="10">
        <location>
            <begin position="180"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="44"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="153"/>
            <end position="155"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW27640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="349" mass="37577" checksum="B4601CBEFB0BFD1F" modified="2014-02-19" version="1">MHKSASGSTLGPGGLDLTQAFFKPINNAAPSSTPNPHNKISVIGVGNVGMAIAQTILTQDLTDELVLIDTNADKLRGEMLDLQHAAAFLPRTKIHASVDSSATAGSNLCIVTAGARQIAGESRLNLLQRNLSIFRSIIPPLVRHSPDTTLLIVSNPVDILTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIVYEKETLENIHKSVVESAYEVIRLKGYTSWAIGYSVANLARSILRDQRKIHPVSVLAKGFYGIDGEVFLSLPAQLGRGGILGVTNVHLNQEETQRLVDSAKTILQVQTELGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF35</accession>
    <name>V7CF35_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G0184000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF35"/>
    <dbReference type="STRING" id="3885.V7CF35"/>
    <dbReference type="Gramene" id="ESW28792">
        <property type="protein sequence ID" value="ESW28792"/>
        <property type="gene ID" value="PHAVU_002G0184000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4569">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LMMINAV"/>
    <dbReference type="OrthoDB" id="1724626at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004806">
        <property type="term" value="F:triacylglycerol lipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044819">
        <property type="entry name" value="OBL-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46086">
        <property type="entry name" value="ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46086:SF13">
        <property type="entry name" value="TRIACYLGLYCEROL LIPASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW28792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="84" mass="9673" checksum="31FFE12AAA989A8E" modified="2014-02-19" version="1" fragment="single">ILEEEPNKNYFSPWCVIPMVFNAVLEMIRSFTIATKHGTHYREGWFLFGFRLFGLVLPGLPAHGTQDYVNSTLLGSIERHFKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFJ8</accession>
    <name>V7CFJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_002G033800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="9" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFJ8"/>
    <dbReference type="SMR" id="V7CFJ8"/>
    <dbReference type="Gramene" id="ESW28977">
        <property type="protein sequence ID" value="ESW28977"/>
        <property type="gene ID" value="PHAVU_002G033800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28978">
        <property type="protein sequence ID" value="ESW28978"/>
        <property type="gene ID" value="PHAVU_002G033800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DINCLKC"/>
    <dbReference type="OrthoDB" id="689350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051863">
        <property type="entry name" value="HIPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811">
        <property type="entry name" value="COPPER TRANSPORT PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811:SF13">
        <property type="entry name" value="OS04G0661100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="7">
        <location>
            <begin position="2"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="63"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="78"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW28977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="137" mass="15498" checksum="F27CD06DAEE4D466" modified="2014-02-19" version="1">MVKKTVLKVDITCVKCKRKLLKTVSSLQGVDKIEADEGKGTLTVTGDADPYDIIVRIRKAGKHAEVVSVGPPPAPPKQDQKKPEEKKPDEKKKPDPVKQEQKPNEPYMQMPYYYPPHQPVVVYMNRYEEPNPSCTIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CG81</accession>
    <name>V7CG81_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">GRAM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_003G274200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CG81"/>
    <dbReference type="STRING" id="3885.V7CG81"/>
    <dbReference type="Gramene" id="ESW28285">
        <property type="protein sequence ID" value="ESW28285"/>
        <property type="gene ID" value="PHAVU_003G274200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3294">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YHSQPAE"/>
    <dbReference type="OrthoDB" id="1259151at2759"/>
    <dbReference type="PhylomeDB" id="V7CG81"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031490">
        <property type="term" value="F:chromatin DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003713">
        <property type="term" value="F:transcription coactivator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13214">
        <property type="entry name" value="PH-GRAM_WBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044852">
        <property type="entry name" value="WBP2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31606">
        <property type="entry name" value="WW DOMAIN BINDING PROTEIN 2, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31606:SF1">
        <property type="entry name" value="WW DOMAIN BINDING PROTEIN 2, ISOFORM E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50729">
        <property type="entry name" value="PH domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="181"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW28285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="210" mass="23566" checksum="8B6CF46F411A2834" modified="2014-02-19" version="1">MALNPQLFPNGMPVPFVSEMFVLARDGVEFDIDKIPASGSHGGHLKTKGIVYLSNIRMVFVAKSPVGHFTAFDMPLLYVSGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKIIFKEGGCGTFIPLFFNLIASVRQYNQHYTMQAQAQAQSYVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQQPNSDSQLRRRTYQPQADGGHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGP9</accession>
    <name>V7CGP9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">mannitol dehydrogenase</fullName>
            <ecNumber evidence="9">1.1.1.255</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_003G287500g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>D-mannitol + NAD(+) = D-mannose + NADH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15029"/>
            <dbReference type="ChEBI" id="CHEBI:4208"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16899"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.255"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.255" evidence="9"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGP9"/>
    <dbReference type="SMR" id="V7CGP9"/>
    <dbReference type="STRING" id="3885.V7CGP9"/>
    <dbReference type="Gramene" id="ESW28450">
        <property type="protein sequence ID" value="ESW28450"/>
        <property type="gene ID" value="PHAVU_003G287500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0023">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GPAWFVF"/>
    <dbReference type="OrthoDB" id="1879366at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046029">
        <property type="term" value="F:mannitol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009809">
        <property type="term" value="P:lignin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd05283">
        <property type="entry name" value="CAD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000022">
        <property type="entry name" value="Cinnamyl alcohol dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000100">
        <property type="entry name" value="Putative cinnamyl alcohol dehydrogenase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.180.10:FF:000126">
        <property type="entry name" value="Uncharacterized protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.180.10">
        <property type="entry name" value="Medium-chain alcohol dehydrogenases, catalytic domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR047109">
        <property type="entry name" value="CAD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42683">
        <property type="entry name" value="ALDEHYDE REDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="GroES-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Enoyl reductase (ER)" evidence="11">
        <location>
            <begin position="23"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00051097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00056693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00066829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="357" mass="38216" checksum="96690E1E999D2744" modified="2014-02-19" version="1">MAVTPGLEHARKAIGWAARDTSGVLSPFNFTRRETGDKDVAIKVLFCGVCHSDLHNAKSDWGQSFYPLVPGHEIAGEVIEVGSKVGKFKVGEKVGVGCMVQSCRSCKSCGENLENYCQGMVLTYGSKDIDGSITQGGYSDMVVVDEHFVISIPDGLPLEAAAPLLCAGITVYSPLLYFGLAKPDLHVGVVGLGGVGHMAVKFAKSFGAKVTVISTSPNKRKEAIEHLGADSFVVSREQDQMQAAKGTLDGIIDTVSAVHPLLPLLELLKTHGKLVIVGLPDKPLELSAFPLVVARKMVAGSCIGGIKETQEMINFAAKHDVKPDIEVIPIDYLNKAMERLVKADVKYRFVIDIGNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CI68</accession>
    <name>V7CI68_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Casein kinase II subunit beta</fullName>
            <shortName evidence="5">CK II beta</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G002500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Plays a complex role in regulating the basal catalytic activity of the alpha subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytosol</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the casein kinase 2 subunit beta family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CI68"/>
    <dbReference type="SMR" id="V7CI68"/>
    <dbReference type="STRING" id="3885.V7CI68"/>
    <dbReference type="Gramene" id="ESW28596">
        <property type="protein sequence ID" value="ESW28596"/>
        <property type="gene ID" value="PHAVU_002G002500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3092">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="3971593at2759"/>
    <dbReference type="PhylomeDB" id="V7CI68"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005956">
        <property type="term" value="C:protein kinase CK2 complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019887">
        <property type="term" value="F:protein kinase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1820.10:FF:000002">
        <property type="entry name" value="Casein kinase II subunit beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.25.20:FF:000003">
        <property type="entry name" value="Casein kinase II subunit beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.25.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1820.10">
        <property type="entry name" value="protein kinase ck2 holoenzyme, chain C, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016149">
        <property type="entry name" value="Casein_kin_II_reg-sub_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035991">
        <property type="entry name" value="Casein_kinase_II_beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000704">
        <property type="entry name" value="Casein_kinase_II_reg-sub"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11740">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11740:SF21">
        <property type="entry name" value="CASEIN KINASE II SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01214">
        <property type="entry name" value="CK_II_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00472">
        <property type="entry name" value="CASNKINASEII"/>
    </dbReference>
    <dbReference type="SMART" id="SM01085">
        <property type="entry name" value="CK_II_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57798">
        <property type="entry name" value="Casein kinase II beta subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01101">
        <property type="entry name" value="CK2_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="62"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW28596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="285" mass="31913" checksum="8708AC3AA398CBBC" modified="2014-02-19" version="1">MYRERGVGSKSEVTSADRKRINDVLDKQLERSSPSTSRAAAINGKDRSSSTSLLAAAKDSRSASVTAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CIW6</accession>
    <name>V7CIW6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="24">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="22" type="ORF">PHAVU_002G023400g</name>
    </gene>
    <organism evidence="22 23">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="23" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="23">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CIW6"/>
    <dbReference type="SMR" id="V7CIW6"/>
    <dbReference type="STRING" id="3885.V7CIW6"/>
    <dbReference type="Gramene" id="ESW28851">
        <property type="protein sequence ID" value="ESW28851"/>
        <property type="gene ID" value="PHAVU_002G023400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SCYSEAR"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000481">
        <property type="entry name" value="Wall-associated receptor kinase-like 14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000161">
        <property type="entry name" value="Wall-associated receptor kinase-like 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.10">
        <property type="entry name" value="Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008">
        <property type="entry name" value="LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46008:SF62">
        <property type="entry name" value="PROTEIN KINASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="15" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="10 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="23" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5 19" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757817" description="Protein kinase domain-containing protein" evidence="19">
        <location>
            <begin position="24"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="249"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="21">
        <location>
            <begin position="184"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="314"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="600"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="602"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="343"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="15">
        <location>
            <begin position="191"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00056804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="EMBL" id="ESW28851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="24">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="681" mass="75346" checksum="88D344C2D9A16C9A" modified="2014-02-19" version="1">MFLRRRTNLVIVLTILMACTARAQNVTCNRQCGKQSLQFPFGFSEGCEIRLNCFDNQVQIYEFLVQNVTDSNIFVNLPGKCNRRMESIEPLFQSNFAPSVNNSFLVQNCSEQFGGCVIPASNFGESCDKKSGNISCFSKQDGADVVKYTDLNGTKCKYLFSAVSFGQSHETVLQFQMVELGWWLHGQCDECSDNSTCTPVPLQGGFRCQCIHGFTGDGFRMGTGCRKTSASSCSASTLTSGGCGKATKIGVAVGAIIAGALVMAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLTSVSHPNLVRLLGCCVEKGEQILVYEFMQNGTLSQHLQRERSEGLPWTVRLTIATETANAIAYLHSEIHPPIYHRDIKSSNILLDYQFKSKIADFGLSRLGLTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKAVDFSRPRTEVNLAALAVDRIRRGAVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIKRSGWASMEETAMASSNGSTCSSPRNGSEKSLSGINKAGQGSARLIVPQKIERFFHSVELKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ04</accession>
    <name>V7CJ04_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G125900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ04"/>
    <dbReference type="Gramene" id="ESW30114">
        <property type="protein sequence ID" value="ESW30114"/>
        <property type="gene ID" value="PHAVU_002G125900g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1433686at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755394" evidence="1">
        <location>
            <begin position="28"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="110" mass="12071" checksum="6C8BE783980A826A" modified="2014-02-19" version="1">MAIAAKTRLPLLACILVIILFLDIGGAESTMKESDLKDLGEWMSIKDIEEKDVYCCSDNRVRSCNPGTQDDKHCNSLCLNHPCGKGGRCKVFGHKNPSHFVKSNDDGSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJR3</accession>
    <name>V7CJR3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_002G147300g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJR3"/>
    <dbReference type="STRING" id="3885.V7CJR3"/>
    <dbReference type="Gramene" id="ESW30364">
        <property type="protein sequence ID" value="ESW30364"/>
        <property type="gene ID" value="PHAVU_002G147300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUG0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LPMDIQH"/>
    <dbReference type="OrthoDB" id="1882547at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11299">
        <property type="entry name" value="O-FucT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024709">
        <property type="entry name" value="FucosylTrfase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052272">
        <property type="entry name" value="GT106_glycosyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31933">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31933:SF20">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009360">
        <property type="entry name" value="UCP009360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="10" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW30364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="514" mass="57459" checksum="669533EF39B88E5D" modified="2014-02-19" version="1">MIEPANLNQGHPCRASTLVTLSLLFFTLVLFSSFTNASSSSVYPELNPIKPRHSRLLRSAVQRETPASQLSELWSPLESQGWKSYVESNKPKLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFVDIFDVDHFIDVLKDDISIVKELPGEYSWSTREYYGLAIRETRIKAAPVHASAHWYLENVLPVLQSYGIAAISPFSHRLSFDNLPMDIQHLRCKVNFEALIFVPHIRTLGDALISRLRNPDASAGEMGSNYLQEVTSEGASKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRGQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRELFPLMEDKKSLASSDQRAQIKGKASLLAALDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKTIEWSEFHDAVVEGHQNRQGQVRLRKPKQSIYTYPAPDCMCQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK15</accession>
    <name>V7CK15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CBS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G089600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK15"/>
    <dbReference type="STRING" id="3885.V7CK15"/>
    <dbReference type="Gramene" id="ESW29678">
        <property type="protein sequence ID" value="ESW29678"/>
        <property type="gene ID" value="PHAVU_002G089600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1764">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IYEPPGY"/>
    <dbReference type="OrthoDB" id="449052at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd02205">
        <property type="entry name" value="CBS_pair_SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="entry name" value="CBS-domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050511">
        <property type="entry name" value="AMPK_gamma/SDS23_families"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13780">
        <property type="entry name" value="AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13780:SF47">
        <property type="entry name" value="SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="CBS-domain pair"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0129">CBS domain</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="CBS" evidence="4">
        <location>
            <begin position="58"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="4">
        <location>
            <begin position="295"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="4">
        <location>
            <begin position="378"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW29678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="450" mass="48593" checksum="EC443532E9B3A76D" modified="2014-02-19" version="1">MPLVPNMAQEQEFRTSNSLSKCETYFEIIQSRKKLPQSLQETLTDAFAKIPVSSFPEVPSGKVIEILADTPVGEAVKILSESNILAAPVKDPDAVTSSDWRSKYLGIIDYSAIILWVLESAELAAAAISTGTATAAGVGAGTVGALGALALGMTGPAAIAGLTAAAAGAALVGGIAADNVMANDAPQAADDLGEDFYKVILEEEPFKSTTVKSILTSYRWAPFVPVGKESAMLTVLLLLSKYRLRNVPVIEPGKPDMVNFITQSAVVKGLERCKGRDWFDCIAEKCISDLGLPFMSTAEVISIQSNELILEAFKKMRDNKIGGLPVVEGPRKSIVGNVSIRDIRYLLLRPEMFTNFRKLTVMDFMNKIVSSSLQTGNGSHQPITCKPDATMQSVIHTLTSQSIHRIHVVDGQNEVVGVITLRDVISCFVTEPPYHFDDYYGFAVKEMLSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL91</accession>
    <name>V7CL91_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">protein-S-isoprenylcysteine alpha-carbonyl methylesterase</fullName>
            <ecNumber evidence="10">3.1.1.n2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_002G197000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>[protein]-C-terminal S-[(2E,6E)-farnesyl]-L-cysteine methyl ester + H2O = [protein]-C-terminal S-[(2E,6E)-farnesyl]-L-cysteine + methanol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:48520"/>
            <dbReference type="Rhea" id="RHEA-COMP:12125"/>
            <dbReference type="Rhea" id="RHEA-COMP:12126"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:90510"/>
            <dbReference type="ChEBI" id="CHEBI:90511"/>
            <dbReference type="EC" id="3.1.1.n2"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Golgi apparatus membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the AB hydrolase superfamily. Isoprenylcysteine methylesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.n2" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL91"/>
    <dbReference type="SMR" id="V7CL91"/>
    <dbReference type="STRING" id="3885.V7CL91"/>
    <dbReference type="Gramene" id="ESW30962">
        <property type="protein sequence ID" value="ESW30962"/>
        <property type="gene ID" value="PHAVU_002G197000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1516">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHADDKE"/>
    <dbReference type="OrthoDB" id="6495301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000139">
        <property type="term" value="C:Golgi membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000084">
        <property type="entry name" value="Isoprenylcysteine alpha-carbonyl methylesterase ICME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049492">
        <property type="entry name" value="BD-FAE-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050300">
        <property type="entry name" value="GDXG_lipolytic_enzyme"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48081">
        <property type="entry name" value="AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48081:SF33">
        <property type="entry name" value="KYNURENINE FORMAMIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20434">
        <property type="entry name" value="BD-FAE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7" id="KW-0333">Golgi apparatus</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="BD-FAE-like" evidence="13">
        <location>
            <begin position="130"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00038028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00038928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00049507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF20434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW30962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="414" mass="45940" checksum="7FB95A8D127F20AB" modified="2014-02-19" version="1">MAALTNRRRTLPPDDVGSQAITADSVSANYLTTHHLANGKTGLRPPLARQESLRRNIEHVAAETYLITRLAFTLLRYLGIGYLWISQLLALGCYAVLLMPGFLQVAYEYFSSTKVRRSLVYGDQPRNRFDLYLPADIGEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERGIIVACLDYRNFPQGTISDMVNDTSQGISFIINNIANYGGDPNRVYLMGQSAGAHISSCALLEQAARESEKGENVSWSISQIKAYFGLSGGYNLLDLVDHFHKRGLYRRIFLSIMEGEESLKVFSPEIKIQEPCLKSVIPHFPPVYLVHGTADYSIPSVASERFADALQKAGARAELILCEGKTHTDLFLQDPLRGGNDYLFDHAVAIIHSNDSDALTKDVFAPRRKRFVPEILLKLASKISPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLR5</accession>
    <name>V7CLR5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G103200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLR5"/>
    <dbReference type="STRING" id="3885.V7CLR5"/>
    <dbReference type="Gramene" id="ESW29841">
        <property type="protein sequence ID" value="ESW29841"/>
        <property type="gene ID" value="PHAVU_002G103200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRYN">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MKTRRNI"/>
    <dbReference type="OrthoDB" id="566751at2759"/>
    <dbReference type="PhylomeDB" id="V7CLR5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021503">
        <property type="entry name" value="DUF3110"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37178">
        <property type="entry name" value="PLANT/PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37178:SF1">
        <property type="entry name" value="PLANT_PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11360">
        <property type="entry name" value="DUF3110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW29841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="253" mass="28320" checksum="924FB502C623507A" modified="2014-02-19" version="1">MDSLPSVSPSMVLPPSHPFRRLPPRLLSAGTRSRRRRHVSLSCTLAGDGTDDDLDRALHMDGAIPGTSNEFVKRVSSRAYDMRRNLQQSFDSSSYDVLDANPWRETSKPVYVLTQKENQLCTMKTRRNRSEVERELGLLFSKGGKWGSGIGNQSKQARGGATKFQMLVEDVREGVLVFEDENEAVKYCDLLEGGGQGCEGVAEIEASSIFDLCQKMRALAVLFRRGRTPPLPESLKLNLRARKRSLEDQDDLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNC4</accession>
    <name>V7CNC4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TPX2 central domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G152300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNC4"/>
    <dbReference type="STRING" id="3885.V7CNC4"/>
    <dbReference type="Gramene" id="ESW30421">
        <property type="protein sequence ID" value="ESW30421"/>
        <property type="gene ID" value="PHAVU_002G152300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSKT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEVEQVF"/>
    <dbReference type="OrthoDB" id="1684416at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005880">
        <property type="term" value="C:nuclear microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005819">
        <property type="term" value="C:spindle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008017">
        <property type="term" value="F:microtubule binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030295">
        <property type="term" value="F:protein kinase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090307">
        <property type="term" value="P:mitotic spindle assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060236">
        <property type="term" value="P:regulation of mitotic spindle organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027330">
        <property type="entry name" value="TPX2_central_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009675">
        <property type="entry name" value="TPX2_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14326:SF15">
        <property type="entry name" value="OS06G0130200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14326">
        <property type="entry name" value="TARGETING PROTEIN FOR XKLP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12214">
        <property type="entry name" value="TPX2_importin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPX2 central" evidence="2">
        <location>
            <begin position="255"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="329"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12214"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="513" mass="57336" checksum="1BD9A8B4FDCBD544" modified="2014-02-19" version="1">MVMMMMMTEEEDMEIEEPQLFVAHEIDLDYEFDAVRFFDFSQQETPAQARQAQLWFQSAVSYPPSPFVAKLVVGEDESERLECATTVHGAKPDNVLSGIGFSRTVFHHDGGSKGGDESGNMSAFLSGVPRDISGKLLPVTPGLTFSSKTINSNLSSKVKPAVVKVSTLMKPTASQLAKQNRPHQIVSSRFQKAQDQNKKMNLSTSFGIECQAAKRQKLEGGTLHKVGDEKQQVNFVHKAPKKVASVDQNSGHSKLKITIPREPDLETAHRAQRIRPKKAAEAEVVTVAAPRFKARPLNRKILDAPLLPFSKRSTPRLPEFQEFHLKTQERAMQHTSASSSSSLHCNDSYKDSDKPTAVFAQENRIRDLRRPSAMGAQKHNVLDFAHSFKARPLNKKIFSSKGDIGVFRNRKQETTVPMEFNFHTEKRIQHNPPIELFSKMSLTSEVQSNNGSQLKMHRHSKVFREDSKENIGSSFHGDAKETPFIFGGKQSGREGCVREAGTLLTARRSLGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS53</accession>
    <name>V7CS53_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase RsuA/RluA-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G032500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS53"/>
    <dbReference type="SMR" id="V7CS53"/>
    <dbReference type="STRING" id="3885.V7CS53"/>
    <dbReference type="Gramene" id="ESW32964">
        <property type="protein sequence ID" value="ESW32964"/>
        <property type="gene ID" value="PHAVU_001G032500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1919">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ACEATTQ"/>
    <dbReference type="OrthoDB" id="428658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2350.10">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluA-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050188">
        <property type="entry name" value="RluA_PseudoU_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21600">
        <property type="entry name" value="MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21600:SF53">
        <property type="entry name" value="RNA PSEUDOURIDINE SYNTHASE 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="Pseudouridine synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pseudouridine synthase RsuA/RluA-like" evidence="3">
        <location>
            <begin position="191"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="46"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW32964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="480" mass="54566" checksum="88CE63D492432B50" modified="2014-02-19" version="1">MLNRVRNNNNSCSWLLFVVRHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLLSLPPFPGHPLPAKSSTSDPGQRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTADSYTQKENLMKPMRKIRPNEVMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVLNNSSEELHSSLNQQPEVLRFVATMPSHMRISWNLMSSYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT41</accession>
    <name>V7CT41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Homologous recombination OB-fold protein OB-fold domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G330100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT41"/>
    <dbReference type="STRING" id="3885.V7CT41"/>
    <dbReference type="Gramene" id="ESW32533">
        <property type="protein sequence ID" value="ESW32533"/>
        <property type="gene ID" value="PHAVU_002G330100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXQD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEDQPNP"/>
    <dbReference type="OrthoDB" id="1373498at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000725">
        <property type="term" value="P:recombinational repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028045">
        <property type="entry name" value="HROB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058570">
        <property type="entry name" value="HROB_OB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14523:SF1">
        <property type="entry name" value="HOMOLOGOUS RECOMBINATION OB-FOLD PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14523">
        <property type="entry name" value="UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15072">
        <property type="entry name" value="HROB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Homologous recombination OB-fold protein OB-fold" evidence="2">
        <location>
            <begin position="107"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="327"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="231"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="329"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="346"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF15072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="400" mass="44597" checksum="3D543171DBFE4F70" modified="2014-02-19" version="1">MEMEEPWEALDVDDSDTSAFLRPCNAHSSSSSLIPGPAGAVQAVMSNRSRDHPLPTQEFLRRVGRESHRDFSTNPWLCAIQFVRSQGMVDADDAAHGTPLNSIKNIERVPLVVAVIKSCTPNGLGDMTITLKDPTVTVSASVHRKVFAQPEFRKGIAVDSVLVLQEVAVFCPTRSTCYLNVTVRNILQVFSKDCGPPSQQLIDPVRPVIRTTPSVERLEGLLASGGTFSPPRERNEETMSDLRLESSSRQVADVDWQRAEVLGSTICHRDNEKYQNLETVSERENFPLSLDNAGHVQVHCVGELDCEMEDQPNPPRLDEEADSLARIAQGNSSTTNSVHTSQAEKTGMENHLESQRQIENHLESQRQIENHLESQRQMENKKSSVPHWTDEQLDELLAFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CT68</accession>
    <name>V7CT68_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exocyst subunit Exo70 family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G0601001g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="6" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Component of the exocyst complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the EXO70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CT68"/>
    <dbReference type="SMR" id="V7CT68"/>
    <dbReference type="STRING" id="3885.V7CT68"/>
    <dbReference type="Gramene" id="ESW33318">
        <property type="protein sequence ID" value="ESW33318"/>
        <property type="gene ID" value="PHAVU_001G0601001g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW33319">
        <property type="protein sequence ID" value="ESW33319"/>
        <property type="gene ID" value="PHAVU_001G0601001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2344">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IHRSWKH"/>
    <dbReference type="OrthoDB" id="1922221at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000145">
        <property type="term" value="C:exocyst"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005546">
        <property type="term" value="F:phosphatidylinositol-4,5-bisphosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1280.170:FF:000007">
        <property type="entry name" value="Exocyst subunit Exo70 family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.170">
        <property type="entry name" value="Exocyst complex component Exo70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016159">
        <property type="entry name" value="Cullin_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004140">
        <property type="entry name" value="Exo70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046364">
        <property type="entry name" value="Exo70_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542">
        <property type="entry name" value="EXOCYST COMPLEX PROTEIN EXO70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12542:SF85">
        <property type="entry name" value="EXOCYST SUBUNIT EXO70 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03081">
        <property type="entry name" value="Exo70_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20669">
        <property type="entry name" value="Exo70_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74788">
        <property type="entry name" value="Cullin repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0268">Exocytosis</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Exocyst complex subunit Exo70 C-terminal" evidence="4">
        <location>
            <begin position="277"/>
            <end position="632"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU365026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW33319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="670" mass="75601" checksum="67D9652A05DBE0F3" modified="2014-02-19" version="1">MEGSRMENLIRAEKSLRLSLEKSKSVGLALEKAGPRLAEIRQRLPSLGSAVRPIRAERDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLEAALCKLEDEFRLLLTENSVPLPMSVAVAGDGMACIAPSPLPVSVVQKLQAILGRLIANDRLDRCVGIYVEARSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGGPCAEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPVDGSVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQDRLLVTEILNIVKAVEQNVETWIKAYDDPTLSHFFAMNNHWHLCKHLKGTKLGELLGDSWLKNHEQYKEYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLFLYRPRPLRHGSLRSPTFSAKYGNGVPDLRRTASAVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="24" xmlns="https://uniprot.org/uniprot">
    <accession>V7CU32</accession>
    <name>V7CU32_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G0890001g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CU32"/>
    <dbReference type="Gramene" id="ESW33667">
        <property type="protein sequence ID" value="ESW33667"/>
        <property type="gene ID" value="PHAVU_001G0890001g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1934442at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10775">
        <property type="entry name" value="OS08G0208400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10775:SF182">
        <property type="entry name" value="TRANSPOSON, EN_SPM-LIKE, TRANSPOSASE-ASSOCIATED DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW33667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="46" mass="5119" checksum="C844EC0EB62367D9" modified="2014-02-19" version="1" fragment="single">MHVEKNVCDNIIGTLLDIQGKTKDGVNARLDMVEMGIREQLAPQSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUV1</accession>
    <name>V7CUV1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="5">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_001G040300g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the leguminous lectin family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the leguminous lectin family.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="5"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUV1"/>
    <dbReference type="SMR" id="V7CUV1"/>
    <dbReference type="STRING" id="3885.V7CUV1"/>
    <dbReference type="Gramene" id="ESW33065">
        <property type="protein sequence ID" value="ESW33065"/>
        <property type="gene ID" value="PHAVU_001G040300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R5Z1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFAESEC"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06899">
        <property type="entry name" value="lectin_legume_LecRK_Arcelin_ConA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000522">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase IX.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.200:FF:000280">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase IX.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000529">
        <property type="entry name" value="L-type lectin-domain containing receptor kinase IX.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050528">
        <property type="entry name" value="L-type_Lectin-RKs"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000985">
        <property type="entry name" value="Lectin_LegA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019825">
        <property type="entry name" value="Lectin_legB_Mn/Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001220">
        <property type="entry name" value="Legume_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27007">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00139">
        <property type="entry name" value="Lectin_legB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00308">
        <property type="entry name" value="LECTIN_LEGUME_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00307">
        <property type="entry name" value="LECTIN_LEGUME_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 19" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="18" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="13" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0430">Lectin</keyword>
    <keyword evidence="16 20" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 19" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-0675">Receptor</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="10 21" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 20" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15 20" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="21">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004758131" description="non-specific serine/threonine protein kinase" evidence="21">
        <location>
            <begin position="27"/>
            <end position="664"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="20">
        <location>
            <begin position="281"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="22">
        <location>
            <begin position="352"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="binding site" evidence="19">
        <location>
            <position position="381"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW33065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="664" mass="73984" checksum="98F91602ABFDAAF7" modified="2014-02-19" version="1">MRLLEKVTTFVLLLALHPPFLKTVESLNFNITNFNDPESEKTMAYVGDGQATNGTIQLNIVDYLFRVGRALYAKPLHLWDASSSVLTDFTTRFTFTIDRATNGTYADGFAFYMAPHGYQIPPNAAGGTFALFNTTSNTFIPHNHVLAVEFDTLNGTIDPPMQHVGIDDNSLKSVAFAKLDIDKNLGKKCNVLITYTASNKTLFVAWSFNGTANSHSNSSLSYKIDLMEILPEWVDVGFSASTGELTEHNIIHSWQFSSTLNSDATDNSSGEGNGGNGKRNVLVIAVATTSTVLVVVVASIAVWAMIRRKRRDTVDESNDGEGGANSVKFDLDRATIPRRFDYKELVAATNEFADDRKLGRGGSGQVYKGLLSDLGRVVAVKRIFANFGNSERVFINEVRVISRLIHRNLVQFVGWCHEEGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTYGYLAPEYLNGGRPSKESDIYSFGVVALEIACGRRTYKDGEFHVPLTNWVWQQYVEGNVMDVVDERLNKEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDHLPLVKYSPQINSQCMQTLPFTDSFTTVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVA1</accession>
    <name>V7CVA1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G020800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVA1"/>
    <dbReference type="STRING" id="3885.V7CVA1"/>
    <dbReference type="Gramene" id="ESW32831">
        <property type="protein sequence ID" value="ESW32831"/>
        <property type="gene ID" value="PHAVU_001G020800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXH3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DKFTWAF"/>
    <dbReference type="OrthoDB" id="1930572at2759"/>
    <dbReference type="PhylomeDB" id="V7CVA1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36324">
        <property type="entry name" value="OS09G0460100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36324:SF1">
        <property type="entry name" value="OS09G0460100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW32831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="205" mass="23294" checksum="5DE42A5ECEA6F03F" modified="2014-02-19" version="1">MGGVFYHEESANHNKRCKFLAGTLKEVFSHCQTFSRRLSTASLEEECPIIEDVDEMVVSVVRSRAMEKQKLKPSPLRDDFSWTDSPATRELYVTMASPQPRVVIGDGEDDEREEFFSVKSCLSCCSSNAVSEQPFFSVKTNLSRCSSMSGVDMSEHWRRSIIQEFCHCQGWPFGLCRKAVLLPPLPKSPSESWLSRKIQRSTKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVJ5</accession>
    <name>V7CVJ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_001G031100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVJ5"/>
    <dbReference type="Gramene" id="ESW32946">
        <property type="protein sequence ID" value="ESW32946"/>
        <property type="gene ID" value="PHAVU_001G031100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPMJ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SGHLPPY"/>
    <dbReference type="OrthoDB" id="2015146at2759"/>
    <dbReference type="PhylomeDB" id="V7CVJ5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021414">
        <property type="entry name" value="DUF3054"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35283">
        <property type="entry name" value="T12C22.21 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35283:SF3">
        <property type="entry name" value="T12C22.21 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11255">
        <property type="entry name" value="DUF3054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="137"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="193"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="52"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW32946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="249" mass="26957" checksum="1B8D7B4E7615A178" modified="2014-02-19" version="1">MFSKCSSLSSPSKFIITVTNPLQFSNPAPKFISRRNSITRPLHLTLAKDSDSASTPASSSPSSFVNDQPVFLTGEDVPLEGVIQFEKPNSSPQFEKWGRVALLAGADVLALFLFATIGRYSHGLSVLDLETLRTADPFIAGWFLGAYFLGGFGEDGRGMNGLSKGVIATAKSWAVGIPIGIAIRAAGSGHLPNYSFVFVTLGSTAVLLITFRALLYTIIPVDNSKKSDDYRRGSPFELFELLTSLVRRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CW64</accession>
    <name>V7CW64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G076300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CW64"/>
    <dbReference type="SMR" id="V7CW64"/>
    <dbReference type="STRING" id="3885.V7CW64"/>
    <dbReference type="Gramene" id="ESW33515">
        <property type="protein sequence ID" value="ESW33515"/>
        <property type="gene ID" value="PHAVU_001G076300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1513794at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045874">
        <property type="entry name" value="LRK10/LRL21-25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27009">
        <property type="entry name" value="RUST RESISTANCE KINASE LR10-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="349"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="10">
        <location>
            <begin position="408"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="436"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW33515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="497" mass="57010" checksum="23BB27A2F8B19E47" modified="2014-02-19" version="1">MEKEGWNSCSCSAHTLLSIVATIILLFQPDYCIAKRHPPCPPSSCAQIHNISYPFRLKGDPSHCGDKRYELDCVNNATLLTVFSAKFHVRDIDYKRYKIVVTDPGQDEYANCSFIPRNFLTNRNFTTAIGPDDFGSQPFTYEPWEIIRIGYFNCVNPVSDDPRYVKVDMSRCSSGGHVYAVLEPDFYEFSVNDIEVGCYLMVATVWTPKQNVTYHKCDGKDTCDLREITFLERIPKLNSSYDEIRGLISEGIQLSWLPIICEDRCGRGTDCKVINESKGEVECEKHYCHYAYHTTHKCEQWQQILGYIRAYLRGVMYGLGSRITFSTKQLDRPVGLQYFDGGIFIGRNVISIFLAARCLFGVVLILVLLIYKWRRRHFSIYENIENFLLDSHLNPIRYEYREIKKMTRGFKVKLGQGGFGTVYKGKLRSGLDVAVKMLNKSNDNGQDFMNEVATIGRIHHVNVVHLWNAFNGNGKQEEELKSSSRAFKSTLLSFLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXT7</accession>
    <name>V7CXT7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">poly(A)-specific ribonuclease</fullName>
            <ecNumber evidence="7">3.1.13.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_001G193900g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="17">Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Exonucleolytic cleavage of poly(A) to 5'-AMP.</text>
            <dbReference type="EC" id="3.1.13.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the CAF1 family.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.4" evidence="7"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXT7"/>
    <dbReference type="SMR" id="V7CXT7"/>
    <dbReference type="STRING" id="3885.V7CXT7"/>
    <dbReference type="Gramene" id="ESW34944">
        <property type="protein sequence ID" value="ESW34944"/>
        <property type="gene ID" value="PHAVU_001G193900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0304">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YVTFHSA"/>
    <dbReference type="OrthoDB" id="1164111at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030014">
        <property type="term" value="C:CCR4-NOT complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004535">
        <property type="term" value="F:poly(A)-specific ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000289">
        <property type="term" value="P:nuclear-transcribed mRNA poly(A) tail shortening"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009617">
        <property type="term" value="P:response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.420.10:FF:000027">
        <property type="entry name" value="Putative CCR4-associated factor 1 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039637">
        <property type="entry name" value="CNOT7/CNOT8/Pop2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006941">
        <property type="entry name" value="RNase_CAF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10797">
        <property type="entry name" value="CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04857">
        <property type="entry name" value="CAF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0540">Nuclease</keyword>
    <keyword evidence="16" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="15" id="KW-0804">Transcription</keyword>
    <keyword evidence="14" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00025148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW34944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="274" mass="31070" checksum="01460C688846FFD6" modified="2014-02-19" version="1">MALPRGSILTRSVWSSNLESEFDLIRSVIDFFPLISMDTEFPGVVVRPDTCDPSFRHRQPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDPVSWVTFHSAYDFGYLVKLLTQRTLPEELAEFLCLVRVFFGERVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7CY41</accession>
    <name>V7CY41_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Rho-GAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G201400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CY41"/>
    <dbReference type="SMR" id="V7CY41"/>
    <dbReference type="STRING" id="3885.V7CY41"/>
    <dbReference type="Gramene" id="ESW35039">
        <property type="protein sequence ID" value="ESW35039"/>
        <property type="gene ID" value="PHAVU_001G201400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4270">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MENRCES"/>
    <dbReference type="OrthoDB" id="185175at2759"/>
    <dbReference type="PhylomeDB" id="V7CY41"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005096">
        <property type="term" value="F:GTPase activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00132">
        <property type="entry name" value="CRIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00159">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.555.10:FF:000046">
        <property type="entry name" value="Rho GTPase-activating protein 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.810.10">
        <property type="entry name" value="CRIB domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.555.10">
        <property type="entry name" value="Rho GTPase activation protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000095">
        <property type="entry name" value="CRIB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036936">
        <property type="entry name" value="CRIB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008936">
        <property type="entry name" value="Rho_GTPase_activation_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000198">
        <property type="entry name" value="RhoGAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044785">
        <property type="entry name" value="RopGAP1-5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23177">
        <property type="entry name" value="MKIAA1688 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23177:SF62">
        <property type="entry name" value="RHO GTPASE ACTIVATION PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00786">
        <property type="entry name" value="PBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00620">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00285">
        <property type="entry name" value="PBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00324">
        <property type="entry name" value="RhoGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48350">
        <property type="entry name" value="GTPase activation domain, GAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50108">
        <property type="entry name" value="CRIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50238">
        <property type="entry name" value="RHOGAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0343">GTPase activation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CRIB" evidence="3">
        <location>
            <begin position="64"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Rho-GAP" evidence="4">
        <location>
            <begin position="109"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="293"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="411"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="311"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="331"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="427"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="438"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="470" mass="51360" checksum="1086FA95F8E68256" modified="2014-02-19" version="1">MTGQVVVTSVGGCGGGKGRRGGEEDQNPASPVALLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSEEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQLKPTESALLNWAIDLMADVVAEEDYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRKREETAEGGYSPMSFRSSDRQSEDDYDSQQEMDTSGDELRETKSEEEDDDDDHNDVNYSPTSEEDGEGDASSVSEIVECFLKRLDEKTKRLSEEPVGYLQEKLESPKSFSVYNLESALSFTDIKTENSCSSSSSEDDSRTTLTAEESNADTSSSSMGSTSTNDVEMIDKFTDPGSLVPLFASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZF1</accession>
    <name>V7CZF1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Myb/SANT-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G240000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZF1"/>
    <dbReference type="SMR" id="V7CZF1"/>
    <dbReference type="STRING" id="3885.V7CZF1"/>
    <dbReference type="Gramene" id="ESW35504">
        <property type="protein sequence ID" value="ESW35504"/>
        <property type="gene ID" value="PHAVU_001G240000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QV1X">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWTPAYH"/>
    <dbReference type="OrthoDB" id="1341497at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045026">
        <property type="entry name" value="LIMYB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024752">
        <property type="entry name" value="Myb/SANT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47584">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47584:SF17">
        <property type="entry name" value="MYB_SANT-LIKE DNA-BINDING DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12776">
        <property type="entry name" value="Myb_DNA-bind_3"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Myb/SANT-like" evidence="1">
        <location>
            <begin position="9"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Myb/SANT-like" evidence="1">
        <location>
            <begin position="188"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="Myb/SANT-like" evidence="1">
        <location>
            <begin position="380"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW35504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="634" mass="72980" checksum="9362524B4FB162EA" modified="2014-02-19" version="1">MSSPTSKATWTPGFHGIFVDLCLGEMLKNEPGSTRITKVGWRNIVGSFYAKTGVRYDKKQFKNHYDSTRKLWKIWVKLTDDSSMKWDPETRTFGASEEDWQNYIKATPEAAQFQSKEIQFTDKLDIIFDGGNRVEEMKRWASLKWHNDASATSPLRGKEREKKRKYVGRDYESDSTIMVGCSPTPKASWTPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKKQIKNHYDSTRKLWKVWAKLIGDDKMKWDPQTNTFGASEEDWHNCMKAFPEAAQFRFKELQFSDKLSVVFDGAMPTEEMIAMLKRQNDASATLRGKEREKKRRNVGRDCGLKSAIMINAIPISTVPSEQSMSSSSYPKVKAAWTPTVHGIFVDLCLQETLQGNKPGTHFTKEGWKNIMESFYAKTGLNYGRLQLKNHWDSTKEQWKIWCKLIGTSYMKWDSYKLKFEASEEDWSNYLEENPEASQFRVKGLQFTEILEAIFNGTTTTVTGETEPTAQQRKSDDSVVTFPFHTKEPDTANFDEKTECHCDAVASRNGVSIQKNTSAVSSTEDKCNYSIGQCIECLDRMEEIEQGSDLYMFALDVFLKQEYREIFLQLKTANLRISWLQRLQSSGQHPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZF3</accession>
    <name>V7CZF3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_001G244600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZF3"/>
    <dbReference type="SMR" id="V7CZF3"/>
    <dbReference type="Gramene" id="ESW35557">
        <property type="protein sequence ID" value="ESW35557"/>
        <property type="gene ID" value="PHAVU_001G244600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FLYARWI"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000461">
        <property type="entry name" value="RING-H2 finger protein ATL66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044600">
        <property type="entry name" value="ATL1/ATL16-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46913:SF1">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="10" id="KW-0862">Zinc</keyword>
    <keyword evidence="8 14" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="16">
        <location>
            <begin position="107"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW35557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="174" mass="20048" checksum="0A6EAACC911DA476" modified="2014-02-19" version="1">MSNPDTRSFTWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTTVFSAAAHAPPLLPAQGLDPATIKKLPIILHHAPSDRDESAWDETECSICLGEFRDGEKLKVLPACDHYFHCECVDRWLTLHSSCPLCRASLKVESSFPKILIQEPPLRIDFQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZP5</accession>
    <name>V7CZP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fe2OG dioxygenase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G147800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alkB family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZP5"/>
    <dbReference type="SMR" id="V7CZP5"/>
    <dbReference type="STRING" id="3885.V7CZP5"/>
    <dbReference type="Gramene" id="ESW34381">
        <property type="protein sequence ID" value="ESW34381"/>
        <property type="gene ID" value="PHAVU_001G147800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4176">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TNHENCE"/>
    <dbReference type="OrthoDB" id="1916097at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032451">
        <property type="term" value="F:demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.590">
        <property type="entry name" value="Alpha-ketoglutarate-dependent dioxygenase AlkB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037151">
        <property type="entry name" value="AlkB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044842">
        <property type="entry name" value="ALKBH9B/ALKBH10B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31447:SF22">
        <property type="entry name" value="2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31447">
        <property type="entry name" value="HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51197">
        <property type="entry name" value="Clavaminate synthase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="3">
        <location>
            <begin position="295"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="126"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="476"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="132"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW34381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="516" mass="56985" checksum="3CA83E4BEC9965A4" modified="2014-02-19" version="1">MAAVPVSRADPPAMVPPPLLVSDSFAKDAILAWFRGEFAAANAIIDTLCGHLAHLATASSEYEATFAAIHRRRMNWIPVIQMQKYHSIADIALELRRVADRKTETEGARKSESSLDDEQKLEKETLETAGNEADEAAPEYDSPDSEITDSGSQEMQPSALNNNICSNHEECEGRSSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVNDIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKNNIEPIPALVHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILVSENDGNYKGPLMLSLKEGSLIVMRGNSADMSRHVMCPSPNRRVSISFFRVKPDSNQCQSPNPTMTAAMTLWQPGITSPYTLPNGALSGYEVMDMMPKWGIFGAPMVMLPPMRPMAVHSRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVESHLGESTSEPSIAVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0D8</accession>
    <name>V7D0D8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G207800g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0D8"/>
    <dbReference type="Gramene" id="ESW35113">
        <property type="protein sequence ID" value="ESW35113"/>
        <property type="gene ID" value="PHAVU_001G207800g"/>
    </dbReference>
    <dbReference type="OMA" id="NEINWWI"/>
    <dbReference type="OrthoDB" id="1418898at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004926">
        <property type="entry name" value="LEA_3a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509">
        <property type="entry name" value="LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509:SF5">
        <property type="entry name" value="PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03242">
        <property type="entry name" value="LEA_3a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW35113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="97" mass="10962" checksum="F424B0FC95643900" modified="2014-02-19" version="1">MASSFTTIKPFSSFAMLHFSHCLTIRRGYGAASKGVDLIKREMGGKSEEKKVCDEKVCNWWMPDSVTGYYKPSNINEIDPAELRAKLLPRKFKNPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7D0F6</accession>
    <name>V7D0F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">FAS1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G197900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">May be a cell surface adhesion protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the fasciclin-like AGP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D0F6"/>
    <dbReference type="STRING" id="3885.V7D0F6"/>
    <dbReference type="Gramene" id="ESW34995">
        <property type="protein sequence ID" value="ESW34995"/>
        <property type="gene ID" value="PHAVU_001G197900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1437">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ISSRHWP"/>
    <dbReference type="OrthoDB" id="286301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="2.30.180.10:FF:000011">
        <property type="entry name" value="Fasciclin-like arabinogalactan protein 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044654">
        <property type="entry name" value="FLA15/16/17/18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32499">
        <property type="entry name" value="FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32499:SF3">
        <property type="entry name" value="FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="FAS1 domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6" id="KW-0654">Proteoglycan</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756348" description="FAS1 domain-containing protein" evidence="9">
        <location>
            <begin position="29"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="10">
        <location>
            <begin position="40"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="10">
        <location>
            <begin position="250"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW34995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="437" mass="48424" checksum="280A118746AEFDEA" modified="2014-02-19" version="1">MDSPSIYGVTHIFTLFIVFLLPFPSLSAFPHNSSTTPQVNSNSILVALLDSHYTELAELVDKALLLQQLEDAVGNHNITVFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSRHWPAADRRHATLGNHHHLHLATKPSGQMTVDAAEILRADDIVRPDGVIHGIERLLVPRSVQEDFNRRAPEIDPRTHRLKKSAPVPAGAPPVLPIYDAMAPGPSIAPAPAPGPGGAKHHYNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVSYDTLRLPHKVLAQESDGSVKFGHGDSSAYLFDPDIHTDGRISVQGIDGVLFPPEELEERTRRTTPLVKVAAKPRRGKLMEVACSMLGAFGQVCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7D1I7</accession>
    <name>V7D1I7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">OTU domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_001G203400g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C85 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D1I7"/>
    <dbReference type="SMR" id="V7D1I7"/>
    <dbReference type="STRING" id="3885.V7D1I7"/>
    <dbReference type="Gramene" id="ESW35061">
        <property type="protein sequence ID" value="ESW35061"/>
        <property type="gene ID" value="PHAVU_001G203400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35062">
        <property type="protein sequence ID" value="ESW35062"/>
        <property type="gene ID" value="PHAVU_001G203400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2606">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YELGAHY"/>
    <dbReference type="OrthoDB" id="415023at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd22797">
        <property type="entry name" value="OTU_plant_OTU5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.80:FF:000014">
        <property type="entry name" value="Cysteine proteinases superfamily protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003323">
        <property type="entry name" value="OTU_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050704">
        <property type="entry name" value="Peptidase_C85-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12419:SF10">
        <property type="entry name" value="DEUBIQUITINASE OTUD6B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12419">
        <property type="entry name" value="OTU DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02338">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50802">
        <property type="entry name" value="OTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OTU" evidence="3">
        <location>
            <begin position="170"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="115"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="122"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="132"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW35061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="322" mass="36314" checksum="EBB9F2679AB76FCD" modified="2014-02-19" version="1">MEDTQEIEEQAHDRVISDKTSEPETRDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSTKLKEKHAKELAAFGYSSGNGNEKSNLDTLVKAIAGVSVASQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQTDIISDRMIENEKLERKLKPLGFTVCEIKPDGHCLYRAVEDQLAVLSGGGSPYTYQELREMVAAYMRKHTSDFLPFFLSENLIEDDSDESLAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2K7</accession>
    <name>V7D2K7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FCP1 homology domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_001G261600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Probable phosphatase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the CTDSPL2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2K7"/>
    <dbReference type="SMR" id="V7D2K7"/>
    <dbReference type="STRING" id="3885.V7D2K7"/>
    <dbReference type="Gramene" id="ESW35749">
        <property type="protein sequence ID" value="ESW35749"/>
        <property type="gene ID" value="PHAVU_001G261600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35750">
        <property type="protein sequence ID" value="ESW35750"/>
        <property type="gene ID" value="PHAVU_001G261600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35751">
        <property type="protein sequence ID" value="ESW35751"/>
        <property type="gene ID" value="PHAVU_001G261600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35752">
        <property type="protein sequence ID" value="ESW35752"/>
        <property type="gene ID" value="PHAVU_001G261600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1605">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRSDTIF"/>
    <dbReference type="OrthoDB" id="277011at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004721">
        <property type="term" value="F:phosphoprotein phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07521">
        <property type="entry name" value="HAD_FCP1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1000:FF:000015">
        <property type="entry name" value="CTD small phosphatase-like protein 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011948">
        <property type="entry name" value="Dullard_phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004274">
        <property type="entry name" value="FCP1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050365">
        <property type="entry name" value="TIM50"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR02251">
        <property type="entry name" value="HIF-SF_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12210">
        <property type="entry name" value="DULLARD PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03031">
        <property type="entry name" value="NIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00577">
        <property type="entry name" value="CPDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50969">
        <property type="entry name" value="FCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FCP1 homology" evidence="6">
        <location>
            <begin position="249"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00037324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00038355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW35750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="445" mass="50296" checksum="A7CDB23BE71960FB" modified="2014-02-19" version="1">MQAKKKTSRRNASQERGSRKVSRAQRKVSENGGSAEKKVSDLITSSARKNKSFSTLENKAIESIPPTHLNYGCEFVDSGTSNLCLENDAVDGVSLDFMGCNNQAALLESGTIFSPGFHLSKNPGGKVVDRVDFIKIFQNEEHKRISPCQEIKLPQEDTVDGPGSQDFDTAMEVDMNNSSNYSNSAIYLAMKNSKLECVDEHGQDPMSSEICTEEDEFEDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNCEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVMIIDNSPQAFGFQVDNGIPIESWFEDRSDRELLSLLPFLESLVGVDDVRPLIAKKFNLREKIAAAVHPLNTNRRDFLSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P032</accession>
    <name>A0ACC3P032_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001661</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967872">
        <property type="protein sequence ID" value="KAK6645737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="487" mass="54500" checksum="9CED3AED6CF737A0" modified="2026-01-28" version="1">MDLRQVFVSIFLLFLLVSVSVGKKHKFSSPIKTVVVIVMENRSFDHVLGWLKPSRPDIDGLTGSESNPLSVEDAASPAVTVSDDALFIDADPGHSFQAIREQIFGSNETTLNPAPMNGFAQQAESILPGMGKTVMSGFKPETLPVYTKLATHFAVFDKWFASVPASTQPNRFYVHSATSHGAMSNVRKNLVLGFPQKTIFDSLNENGLTFGIYYQNIPATLFFKSLRKLKNAVKFHDYALKFRKHAQRGNLPNYVVVEQRYFDVEVFPANDDHPSHDVAEGQMFVKEVYEILRKSPQWKEMAVLITYDEHGGFYDHVATPVEGVPNPDGIIGPPPYYFGFDRLGVRVPTFLISPWIEKGTVIHEAEGPTPYSQYEHSSIPATVKKLFNLKSNFLTKRDAWAGTFEKYFHFRDTPRDDCPVLNSYPNIGKSMTVKEANRYAEDAVKRFLEAAKAALKAGANESAIVTMRPSLTSRVAVGDDQKHVESY</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P042</accession>
    <name>A0ACC3P042_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001772</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967780">
        <property type="protein sequence ID" value="KAK6645834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="599" mass="66307" checksum="D1AE68AE6733D341" modified="2026-01-28" version="1">MVLRRTFTFTLTTSRYYTSATVSLPHTDHTLLHLLQLCIGLRAQKLAQQSHAQILANGYAQNVFLATRLVSAYATCGGLTSSRFVFEFVEAKNVYLWNSLINGYVKNRNFHQAFALFGEMGRRGVLPDDYTLATVFKVSGELEDLVSGRLIHGKSVRIGFVSDVVVANSLMAMYCRCGEFVQAVKVFDEMPHRNVGSFNVVISGCAALGICTSPSRDDLWNFFVRMQCEGFMADAFTVASLLPVCSGDSGKWDYGRELHCFVVKNGLDLKMGLDVHMGSSLIDMYSRSKRVVIGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLREMQMKGGIRPNKVSLVSVLPACASLAGLTGGKQIHGFSIKMELHDDASLCNALIDMYSKSGSLDYARRAFESDSYFKDGISWSSMISAYGLHGRGEEAVITYHKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPAVEICACVVDMLGRSGQLDEALEFIVEMPLDPGPSVWGSLLTASVMHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASYRRWDVVSEVRTTMKERGLKKIPGCSWITVSDGCADSDILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1X1</accession>
    <name>A0ACC3P1X1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L005143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="819" mass="91771" checksum="6BFA3A2D60E8A8C7" modified="2026-01-28" version="1">MELLKPLHPHHAPNLCLPFHGHPSSSQSQSPLPLPMPRKVHVAVGKSIDKAVTLLQWTFNHFQHAEIVILHAYQPSLTIPTLLGKLPASQASPAVVSAFRCVEREQTMKLLDKYLTICRTARVKASIIVTEADQVQKGIVDLVVKHSIQKLVIGAVPENCMKVKRNSGKANYTAKNAPPFCEVWFIYKGKVIWTREASETPCSSSSCAQPEIATAESLRCRSFQYGKNELFDSECLQPNSARSATGLGIRSCVHEEITETEATFSSKASSCGSHCSSQNSSRAHLDTYLEAMEEKINKQLIETKIEAEAVSDEAFANLLKCERLEVEAMEAIRKVNLFESAHVREVKLRKEAEDALRAAVQEQQKLLNESEEIASELQMTMRNIALLDSHAQEANRRRDEAADELSLIQESISTLWQERQQIRRQKMEALRWLERWRSRGQVGAPRCNGVIGFPEELPELAEFSSSDLQNATCNFSNSFKIVQGGFGCIYKGEMLGRTVTIKKFHQHTMQGPMEFRQEVQVLGSLQHPHLITLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNSPLTWNTRARMIAEIASALCFLHSFKPETIIHGDLKPETVLLDSSLGCKICGFGFCSLVSEESLLRPSFRLSTEPKGAFTYTDPEFHRTGILTTKSDIYSFGLIILQLLTDKTPVGLAALVRNAASCGKLSSILDSSAGEWPSPVASRLVELGLQFCQQNRRDRPDLTPTLVRELEQMHASEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLFLTPNHALRLAIHDWLCKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEP9</accession>
    <name>V7AEP9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G036200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEP9"/>
    <dbReference type="Gramene" id="ESW03715">
        <property type="protein sequence ID" value="ESW03715"/>
        <property type="gene ID" value="PHAVU_011G036200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUR7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NSVSCKH"/>
    <dbReference type="OrthoDB" id="669460at2759"/>
    <dbReference type="PhylomeDB" id="V7AEP9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052776">
        <property type="entry name" value="Chloro_ReproSupport/MetalTrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33876:SF4">
        <property type="entry name" value="CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33876">
        <property type="entry name" value="UNNAMED PRODUCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="306"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="350"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="374" mass="39542" checksum="FD791309D8B9360E" modified="2014-02-19" version="1">MAMDRLLSSSPLHTNLKPFTRFSPRFNLFSSKPSSFTSISCYHENASSPLSSSVPKTLLPIITSQPIRAQTSTPQSQPLNQITTGNNFQKPKAIITARTFAVLSALVLLLIQPAFAPAAFATFQSAAKTGGPAAAAVGGKLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRSRMESAAVGALWGCGHDAGQVIFGLIFLLLKDRLHIEIIRTWGTRVVGLTLLVIGAMGIKEASEVPAPCVALENGECDVGGVYESRDSNPVVGKKKIGFATFATGIVHGLQPDALMMVLPALALPSRVAGAAFLIMFLFGTVVAMGSYTVFIGSCSEALKDRIPRITEKLTWASSLVAIALGFAIIISQFFGFSLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFX8</accession>
    <name>V7AFX8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G037400g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AFX8"/>
    <dbReference type="STRING" id="3885.V7AFX8"/>
    <dbReference type="Gramene" id="ESW03728">
        <property type="protein sequence ID" value="ESW03728"/>
        <property type="gene ID" value="PHAVU_011G037400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PCKIANF"/>
    <dbReference type="OrthoDB" id="625231at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31929">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="92" mass="10333" checksum="5BB81665A9D4D82D" modified="2014-02-19" version="1">MGFRLPGIRKATLAAIQGSSKVLDVPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLSQVEEEFGYHHPMGGLTIPCREDVFLDTTSRLNRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGW8</accession>
    <name>V7AGW8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF8039 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G1256003g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AGW8"/>
    <dbReference type="Gramene" id="ESW04794">
        <property type="protein sequence ID" value="ESW04794"/>
        <property type="gene ID" value="PHAVU_011G1256003g"/>
    </dbReference>
    <dbReference type="OMA" id="MYNIVAC"/>
    <dbReference type="OrthoDB" id="1731907at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058352">
        <property type="entry name" value="DUF8039"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33018:SF34">
        <property type="entry name" value="OS02G0472350 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33018">
        <property type="entry name" value="OS10G0338966 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26133">
        <property type="entry name" value="DUF8039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF8039" evidence="2">
        <location>
            <begin position="73"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF26133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="152" mass="16903" checksum="B1A4B22481ACB2C5" modified="2014-02-19" version="1" fragment="single">TEMESLKEDIRKEIKKEVYSELKKELLLDMREELASMSVKPSVAPSEPSPIRISTKESCDAPEGSEEVGPTILADCELYIDDPLEYLVALGKMYTLGSTIHHQKIADDMIRVVVVDVRDAVARIPVPTKEVQTVGEAPGNFILWPARLAKPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIH8</accession>
    <name>V7AIH8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ELMO domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G113500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIH8"/>
    <dbReference type="SMR" id="V7AIH8"/>
    <dbReference type="Gramene" id="ESW04648">
        <property type="protein sequence ID" value="ESW04648"/>
        <property type="gene ID" value="PHAVU_011G113500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2998">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDLPAYN"/>
    <dbReference type="OrthoDB" id="67155at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006816">
        <property type="entry name" value="ELMO_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050868">
        <property type="entry name" value="ELMO_domain-containing"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12771:SF3">
        <property type="entry name" value="ELMO_CED-12 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12771">
        <property type="entry name" value="ENGULFMENT AND CELL MOTILITY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04727">
        <property type="entry name" value="ELMO_CED12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51335">
        <property type="entry name" value="ELMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELMO" evidence="1">
        <location>
            <begin position="109"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="287" mass="33693" checksum="AFE2508374A8598C" modified="2014-02-19" version="1">MRLRKRKRCFPSCSSLRKVDEDEIYWRHRKEDEELEWTPNSTHLISQLTQCFTNAMVGSRSWIGGLFNRTGTNKRNDKFVDYPLSPAEEERLQRLQERLQVPYDETRPDHQESLRALWHCSFPNVSLEGLVSDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARKYPASFHRLLLKKDGKRATWEYPFAVAGINISYMLIQMLDLCSEKPRCLPGTNFVKLLGENEEAFDILYCIAFEMMDAQWLAMHASYMDFNDVLQATRNQLERELSLEDINKIQDLPAYNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKC8</accession>
    <name>V7AKC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G168700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKC8"/>
    <dbReference type="SMR" id="V7AKC8"/>
    <dbReference type="STRING" id="3885.V7AKC8"/>
    <dbReference type="Gramene" id="ESW05303">
        <property type="protein sequence ID" value="ESW05303"/>
        <property type="gene ID" value="PHAVU_011G168700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RMFV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DEWINMV"/>
    <dbReference type="OrthoDB" id="441210at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005712">
        <property type="term" value="C:chiasma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051026">
        <property type="term" value="P:chiasma assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000405">
        <property type="entry name" value="E3 ubiquitin-protein ligase CCNB1IP1 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055328">
        <property type="entry name" value="HEI10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47384">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47384:SF2">
        <property type="entry name" value="E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14634">
        <property type="entry name" value="zf-RING_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="126"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="305" mass="34508" checksum="B853FE7751FC41E5" modified="2014-02-19" version="1">MRCNACWRELEGRAISTTCGHLLCTDDANKILSNDGACPICDQVLSKSLMKPVDVNPNDEWVNMAMAGVSPQILMKSAYRSVMFYIGQKELEMQFKMNKIVAQCRQKCEMMQEKFTEKLEQVHTAYQKMAKKCQIMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEFDSVKRSAIQPANNFYSRNDHDLFSNPPNIIDDRDIGRKGGPVFTPATPGPRDDVWPARQNSNNSGPFDLSVVSPAKQTAIAGDAGNRRAGAHSVFGPGATNNPSMTLRNMILSPIKRPQLSRNRPQLFTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AL46</accession>
    <name>V7AL46_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">CGL160/ATPI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G130500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AL46"/>
    <dbReference type="STRING" id="3885.V7AL46"/>
    <dbReference type="Gramene" id="ESW04851">
        <property type="protein sequence ID" value="ESW04851"/>
        <property type="gene ID" value="PHAVU_011G130500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVM8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YWGGDDE"/>
    <dbReference type="OrthoDB" id="3700at2759"/>
    <dbReference type="PhylomeDB" id="V7AL46"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056309">
        <property type="entry name" value="CGL160/ATPI_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34118">
        <property type="entry name" value="NF-KAPPA-B INHIBITOR-LIKE PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34118:SF6">
        <property type="entry name" value="PROTEIN CONSERVED ONLY IN THE GREEN LINEAGE 160, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24763">
        <property type="entry name" value="CGL160_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="CGL160/ATPI" evidence="6">
        <location>
            <begin position="192"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="13"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF24763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW04851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="335" mass="36774" checksum="A81808B82278023F" modified="2014-02-19" version="1">MALMSHVCVRCAATPTSPESPSSASLPDPKQTKVILPKKKPMKWSTGMAPGDYGGPPTTTKLRKYWGGDDEDPLASDDFMWNKDFVGRFKKLIQGPPAPSPPAKEEHSGFLSLNRVMSLDSLEVDLSKELAAPVNRNVHKQVEEETDVTGNNRVRYRSAPTRREQEKWNRATKAATGGTDVMFREIKQSREDPKVLAVQAQEQYDKLKNKLQVLTLGIGGVGLVSAYVSYTPEIAASFGAGFLGSLAYIRMLGSSVDSLKTDGAKALVKGAVGQPRLLVPVVLVMVYNRWNAILVPEFGYMHLDLIPMLVGFFTYKIATFVQAIEEAITIATRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMC8</accession>
    <name>V7AMC8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Anaphase-promoting complex subunit 4 WD40 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G013300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="ESW06023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="SMR" id="V7AMC8"/>
    <dbReference type="STRING" id="3885.V7AMC8"/>
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        <property type="protein sequence ID" value="ESW06023"/>
        <property type="gene ID" value="PHAVU_010G013300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0283">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EIQECEV"/>
    <dbReference type="OrthoDB" id="408728at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
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        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
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        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
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    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="WD40_PAC1"/>
    </dbReference>
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        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040324">
        <property type="entry name" value="WDR44/Dgr2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14221:SF41">
        <property type="entry name" value="TRANSDUCIN_WD40 REPEAT-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14221">
        <property type="entry name" value="WD REPEAT DOMAIN 44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
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        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 3" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="399"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="504"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="544"/>
            <end position="578"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="3">
        <location>
            <begin position="690"/>
            <end position="720"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="115"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="219"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="448"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="776"/>
            <end position="820"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="148"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="452"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="4">
        <location>
            <begin position="780"/>
            <end position="797"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW06023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="936" mass="102850" checksum="A72ED3728103D15B" modified="2014-02-19" version="1">MERRKTLTMNWDGLGDVDDDDAFFESYNRLSTAVPQDLASSSDDDDGEFDDPRLSFASAVSSSLSRQRSISSTMDAAPDYGVWMAAPVSINERRKRLLHGMGLDDDKEFSKATPVELGHSVSKHTNPVPSEKPTLTSTSATPVTDKLSTSPATVSTPPATVSTDKVSSENSSLQLVIVRSRSEGDIELFSIERSRREDFIGKGSKQRLTRTVSETAFQRPRWGTRDRAVVRDSDESAESKPKSTKLEDSGVRAFFLIKNLDTGTEFIVNECTESGAWNRLSDLQTGKQLSMEEFEKTVGKSRVVNELMRRGARNESLSRKLTSSSYISRSLRMSKRRGAAFLKNIKGVASGFIGEREREAVAAQAAAANAAAEKSQWVRVRQSGKSHKEVSALHLCQEIQGHEGSVWTIRFSLDGRFLASAGEDKVINVWEVQECEVMSLRPDEGSLTPIHPSLLPSNDLSPLSPAAEKKKKTKFGSKRGPAIPEYVHVPETVFSLSDKLFCTFEGHSDDVLDLSWSKSQLLLSSSMDKTVRLWDLESKTCLNTFTHNDYVTSIQFNPIEDGIFISGSLDAKVRIWSIPERQVVDWIDIHEMVTAVSFTPDGQGALVGTHKGGCRTYSTKDCKLSQTGTIEIRHKKKNQLRKVTGFQFAPGKPLQILVTSADSRIRILDGSEVVQKYRGFRNANSQIAASFSPDGRYIISASEDSEIYIWKHEEHRSAGSGKGKNVLVTRSHEHFHCKDVSVAIPWNSTIKGDPPLVQMHSKKHSKRFQAGFNGVEETASPSAKKNLPPLPKKSNSLTSEGASNSPRKDPAGTSHAESGLGDSFANSIKRMLPQSPLKVNCLTTEEEELETFSCTDSGFSDSFNSTTSSARCDSPSSTASFSSSYSLSDASHASSSVLPSAWGLVIVTAGFGGEIRCYQNFGLPRRIGRQPWYGNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN34</accession>
    <name>V7AN34_PHAVU</name>
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        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_011G1916000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
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        <property type="gene ID" value="PHAVU_011G1916000g"/>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
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    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="Probable disease resistance protein At1g63360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.430:FF:000003">
        <property type="entry name" value="Probable disease resistance protein At5g66910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
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    <dbReference type="InterPro" id="IPR056789">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
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    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
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    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058922">
        <property type="entry name" value="WHD_DRP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766:SF40">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN RGA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36766">
        <property type="entry name" value="PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25019">
        <property type="entry name" value="LRR_R13L1-DRL21"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23559">
        <property type="entry name" value="WHD_DRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="NB-ARC" evidence="4">
        <location>
            <begin position="3"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Disease resistance protein winged helix" evidence="5">
        <location>
            <begin position="171"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="R13L1/DRL21-like LRR repeat region" evidence="6">
        <location>
            <begin position="424"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF23559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF25019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW05581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="927" mass="106153" checksum="E3255F1C55150F31" modified="2014-02-19" version="1">MVQGRLKEKLTGRKFLLVLDDVWNEHRDQWKSLQTPLKYGAKGSKIIITTRSNKVASIMESNKIRQLKQLQEDHSWQVFAKHAFQNDNSKPNSELKKIGTQIVEKCQGLPLALETVGSLLQSKSSVSEWESVLRSNIWDLRNEDSKILPALLLSYYHLPSHLKRCFAYCALFPKEHEFEKQSLILSWMAQNFLQCSQQSESPEEIGEQYFNDLLSRSFFQQSNSLDGRYFVMHDLLNDLAKYVSGETCYRLGVDRPRSVPKTTRHFSILNKVPVECDEYRSLCDAKRLRTFLCRSKNFGMSIKELISNFKFLRHLSLSYCSNIKEVPDTITDLIHLRSLDLSNNFIERLPDSMCSLCNLQVLKLNYCRLLKELPSTLHELSKLRLLELKGTTLRKAPMLLGKLKNLQVWMGGFEVGKSSSEFSIQELGQLDLHGELSIKNLENIVNPCDVLAADLKNKTHLVDLCLEWDCKRNNEDSIKQREVLETLQPSKHLKHLSINGYSGTQFPRWLSDTFVLNVMSLSLYKCKYCQWLPSLGLLTSLKGLVIRGLDEIVRIDADFYGNTSSAFASLERLTFIDMEEWEEWQCMTGAFPSLQYLSLHDCPKLKGHLPDLPHLKDIFIMSCRQLVALTPSGVEIEGVEMETSSFDMIGNHLQSLKIFDCPGMNIPINHFLLILEIRECCDSLTNFPLDLFPKLHELYLGKCHNLQIISQEHPHHHLKSLSIYHCSEFESFPNEGLLAPQIQIIFITKTEKLKSMPKRMSDLLPSLDYLSIRDCPGVELSEGCLPSNIKKMCLLNCSKLVASLKKGGWGTNPSIQLLSINEVDGECFPDEGFLPLSITQLDVKDCPKLKKLDYRGLCHLSSLQKLVIENCPILQCLPEEGLPESISELRIESCPLLNQRCKKEEGEDWIKIAHIKAIWVDWIPVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP66</accession>
    <name>V7AP66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RBR-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="6">2.3.2.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_010G124200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-N(6)-ubiquitinyl-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.31"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RBR family. Ariadne subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.31" evidence="6"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP66"/>
    <dbReference type="STRING" id="3885.V7AP66"/>
    <dbReference type="Gramene" id="ESW07369">
        <property type="protein sequence ID" value="ESW07369"/>
        <property type="gene ID" value="PHAVU_010G124200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1812">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CMVAAEM"/>
    <dbReference type="OrthoDB" id="10009520at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd22582">
        <property type="entry name" value="BRcat_RBR_unk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd22584">
        <property type="entry name" value="Rcat_RBR_unk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000230">
        <property type="entry name" value="RBR-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031127">
        <property type="entry name" value="E3_UB_ligase_RBR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002867">
        <property type="entry name" value="IBR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044066">
        <property type="entry name" value="TRIAD_supradom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11685">
        <property type="entry name" value="RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01485">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00647">
        <property type="entry name" value="IBR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51873">
        <property type="entry name" value="TRIAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="11" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="12" id="KW-0862">Zinc</keyword>
    <keyword evidence="10 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="15">
        <location>
            <begin position="75"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="14">
        <location>
            <begin position="79"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW07369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="33038" checksum="5F314E1B36FAE9BE" modified="2014-02-19" version="1">MNFLSTVDEVDEFYFSEDDGEEMLPMSDERYAEQLQLQEALHSSTTSSARVVKEVLHVDLEAKGKQKETGETSHTLTYCGICMDAKRGEEMFRNQNCSHLYCEDCSGKHVAAKVQENVLTVKCPEPKCKGVIESQNCRSIIPKEVLDRWEDALCENVVNASQKFYCPFKDCSAMMICDSGDSEKAVTTSECPHCNRLFCAQCKVPWHSGANCKEFQIHLDGEREDQRVMELAKSKRWKRCPKCNFYVEKINGCTHISCRCGNEFCYACGMAWSNKHYLCTSLRVLEEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7APY2</accession>
    <name>V7APY2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Small ribosomal subunit protein uS2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G125100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APY2"/>
    <dbReference type="SMR" id="V7APY2"/>
    <dbReference type="STRING" id="3885.V7APY2"/>
    <dbReference type="Gramene" id="ESW07380">
        <property type="protein sequence ID" value="ESW07380"/>
        <property type="gene ID" value="PHAVU_010G125100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0830">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="414863at2759"/>
    <dbReference type="PhylomeDB" id="V7APY2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022627">
        <property type="term" value="C:cytosolic small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000028">
        <property type="term" value="P:ribosomal small subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10490:FF:000017">
        <property type="entry name" value="40S ribosomal protein SA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10490">
        <property type="entry name" value="Glucose-6-phosphate isomerase like protein, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03015">
        <property type="entry name" value="Ribosomal_S2_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_uS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018130">
        <property type="entry name" value="Ribosomal_uS2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027498">
        <property type="entry name" value="Ribosomal_uS2_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005707">
        <property type="entry name" value="Ribosomal_uS2_euk/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_uS2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01012">
        <property type="entry name" value="uS2_euk_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11489">
        <property type="entry name" value="40S RIBOSOMAL PROTEIN SA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="Ribosomal protein S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00963">
        <property type="entry name" value="RIBOSOMAL_S2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="250"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="8">
        <location>
            <begin position="290"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="312" mass="34229" checksum="51AF3B5507B131DC" modified="2014-02-19" version="1">MAAPTNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAGDYAITDYNPGAIAADGQWPGTIDQSWTDAVPQPIPAVPGVNWGAPPTSEAPVAVAGDWGEAVPPPQQIPLPPTGVESVQPTGWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7ARA5</accession>
    <name>V7ARA5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ubiquitin-specific protease family C19-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_010G163500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="4" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ARA5"/>
    <dbReference type="STRING" id="3885.V7ARA5"/>
    <dbReference type="Gramene" id="ESW07845">
        <property type="protein sequence ID" value="ESW07845"/>
        <property type="gene ID" value="PHAVU_010G163500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW07846">
        <property type="protein sequence ID" value="ESW07846"/>
        <property type="gene ID" value="PHAVU_010G163500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRIM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NVCWGTR"/>
    <dbReference type="OrthoDB" id="1899156at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040339">
        <property type="entry name" value="At1g16860-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33709:SF4">
        <property type="entry name" value="OS08G0230200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33709">
        <property type="entry name" value="OSJNBA0035M09.9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="214"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="239"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="66"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="105"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW07845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="478" mass="51290" checksum="113874292E883DD7" modified="2014-02-19" version="1">MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSKSRKSGPINNAPSRTGSFAGAASHSGPIMQNAAARSVYITSGNVSAGGMSASASMKKTNSGPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLDSTGSMKSHTSFAAQNPAVTTLSLDDEFSFKRNFPKPILWSVILIFVMGFIAGGFILGAVRNAILLIVVVVLFAAVAALFTWNSCFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFHKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPDFLRWLGERKLSSDDRIMQLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDVIPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7AS90</accession>
    <name>V7AS90_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G022800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AS90"/>
    <dbReference type="STRING" id="3885.V7AS90"/>
    <dbReference type="Gramene" id="ESW08150">
        <property type="protein sequence ID" value="ESW08150"/>
        <property type="gene ID" value="PHAVU_009G022800g"/>
    </dbReference>
    <dbReference type="OMA" id="CLPVTQH"/>
    <dbReference type="OrthoDB" id="1401130at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048364">
        <property type="term" value="P:root development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048367">
        <property type="term" value="P:shoot system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004320">
        <property type="entry name" value="BPS1_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070:SF129">
        <property type="entry name" value="DUF241 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33070">
        <property type="entry name" value="OS06G0725500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03087">
        <property type="entry name" value="BPS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW08150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="307" mass="34473" checksum="6978CABBE4A872C2" modified="2014-02-19" version="1">MASSPLNPKLHSHGRSNSLPSRPHPLILKCNEHLDSLRASKATTFSSLVLSHKIRCLQDLIECVENLTHLPLTQDVLLHERQENWVDELLDGSLRLLDVCSAAKDALLHTKECARELHSIIRRKRGGEVELTAEAKKFLTSRKVVKKAISKAFANLNGTSKSCNISSTTNKDHQTVALITLLQDTEVATLSTFQTLLQFISGSTQTKSNSWLSISKMIQPKRVSCSEVADESEFAQVDAALQSFVFAKTCKFEETNNLQSHLEKMEGCIQDFEEGLEFLFRRLIKIRVSLLNVLNHWSNIAGTEFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATH9</accession>
    <name>V7ATH9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_009G002600g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UFD1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW07908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATH9"/>
    <dbReference type="SMR" id="V7ATH9"/>
    <dbReference type="STRING" id="3885.V7ATH9"/>
    <dbReference type="Gramene" id="ESW07908">
        <property type="protein sequence ID" value="ESW07908"/>
        <property type="gene ID" value="PHAVU_009G002600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1816">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PKFQPFI"/>
    <dbReference type="OrthoDB" id="422728at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034098">
        <property type="term" value="C:VCP-NPL4-UFD1 AAA ATPase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031593">
        <property type="term" value="F:polyubiquitin modification-dependent protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036503">
        <property type="term" value="P:ERAD pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006511">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.40.50:FF:000001">
        <property type="entry name" value="Ubiquitin fusion degradation protein 1 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.330.10:FF:000002">
        <property type="entry name" value="ubiquitin fusion degradation protein 1 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.50">
        <property type="entry name" value="Ubiquitin fusion degradation protein UFD1, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004854">
        <property type="entry name" value="Ufd1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042299">
        <property type="entry name" value="Ufd1-like_Nn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055417">
        <property type="entry name" value="UFD1_N1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055418">
        <property type="entry name" value="UFD1_N2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555">
        <property type="entry name" value="UBIQUITIN FUSION DEGRADATON PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12555:SF13">
        <property type="entry name" value="UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03152">
        <property type="entry name" value="UFD1_N1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24842">
        <property type="entry name" value="UFD1_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Ubiquitin fusion degradation protein UFD1 N-terminal subdomain 1" evidence="4">
        <location>
            <begin position="12"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin fusion degradation protein UFD1 N-terminal subdomain 2" evidence="5">
        <location>
            <begin position="108"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="261"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="266"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF24842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="301" mass="34054" checksum="8D7FBDB394E3674B" modified="2014-02-19" version="1">MFIDGYHGTSSFEQTYTCYSASFVEKPEIENGDKIIMPPSALDHLAFLRIDYPMMFKLTNGASERVSHCGVLEFIADEGTIYMPYWMMQNMLLQEGDTVRVKYASLPKGTYVKLQPHTKDFFDISNPKAILETSLRKFSCLTTGDTIMVTYNNKRYYLDIIETKPANAISIIETDCEVDFAPSLDYKNLGKPTIADKTQKEGKFNPFVGTGRRLDEKPIPPVYSSGHKYKGADVPNVNAVSSATSSSPNFARPSERKVVFGSNFYRTKETGKEEMEPKPEPPRQKQLRFQPFVGKKYSLMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AVF0</accession>
    <name>V7AVF0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Amino acid transporter transmembrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_009G113800g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex. May be involved in lateral roots and nodules formation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.1) subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AVF0"/>
    <dbReference type="STRING" id="3885.V7AVF0"/>
    <dbReference type="Gramene" id="ESW09270">
        <property type="protein sequence ID" value="ESW09270"/>
        <property type="gene ID" value="PHAVU_009G113800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1303">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVEGWCA"/>
    <dbReference type="OrthoDB" id="40134at2759"/>
    <dbReference type="PhylomeDB" id="V7AVF0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0012505">
        <property type="term" value="C:endomembrane system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009734">
        <property type="term" value="P:auxin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1740.10:FF:000055">
        <property type="entry name" value="Amino acid permease 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013057">
        <property type="entry name" value="AA_transpt_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48017">
        <property type="entry name" value="OS05G0424000 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01490">
        <property type="entry name" value="Aa_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="11" id="KW-0927">Auxin signaling pathway</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0769">Symport</keyword>
    <keyword evidence="6 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="167"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="189"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="322"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="386"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="409"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="448"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="Amino acid transporter transmembrane" evidence="15">
        <location>
            <begin position="34"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00045588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00061463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF01490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW09270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="482" mass="53436" checksum="307BC5C24F23B108" modified="2014-02-19" version="1">MNPDQFQKNNMYVETPEAFGEGGKNFDDDGRVKRTGTWITASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLLAFSCITYFTSTLLADCYRTPDPVHGKRNYTYSAVVKSVLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHHVKCFTSNNPFMIFFACIQIVLSQIPNFSKLWWLSIVAAVMSFAYSSIGLGLSFAKVAGGGDPVRTSLTGVQVGVDVTGSEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPAENKVMKRASLIGIMTTTLFYMLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAVHLVGAYQVFCQPIFGFVENWSKERWPNSQFVNGEHAVNFPLCGTFSVNFFRVVWRTTYVVITALIAMLFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSNMQKFSFTWTWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B007</accession>
    <name>V7B007_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DC1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G011800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B007"/>
    <dbReference type="STRING" id="3885.V7B007"/>
    <dbReference type="Gramene" id="ESW11217">
        <property type="protein sequence ID" value="ESW11217"/>
        <property type="gene ID" value="PHAVU_008G011800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUAU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NWKRGYF"/>
    <dbReference type="OrthoDB" id="1480693at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046349">
        <property type="entry name" value="C1-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004146">
        <property type="entry name" value="DC1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46477">
        <property type="entry name" value="CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46477:SF15">
        <property type="entry name" value="CYSTEINE_HISTIDINE-RICH C1 DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03107">
        <property type="entry name" value="C1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57889">
        <property type="entry name" value="Cysteine-rich domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="225"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="DC1" evidence="4">
        <location>
            <begin position="9"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="255" mass="28592" checksum="455AC4D76A78834F" modified="2014-02-19" version="1">METTKRGCPRHQEQPMQLKPPGSPFKCSGCREVGFGRSYHCQNKNCGYILHEECANADSHASHRFFHRSQFELCEKAPGNRDRYCDACGKDVLGFVYHCSLTGYDLHPCCLYLKDSISDEEGQISLQLCEKVPSVCVRCNHRNVVDGVKGWSYVSSGSGRKYCYHVSCVKQLILENLNRGYFTQETNSVGMSNREYSQLAVRSMEMVPSGGSWRRSGTVRKYTKIAVLVFKLIFSAVFGNPITAIAALVEALVSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0E3</accession>
    <name>V7B0E3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP-dependent RNA helicase</fullName>
            <ecNumber evidence="10">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_009G201200g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">RNA helicase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.13"/>
        </reaction>
    </comment>
    <comment type="domain">
        <text evidence="10">The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family. DDX18/HAS1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="10"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0E3"/>
    <dbReference type="SMR" id="V7B0E3"/>
    <dbReference type="STRING" id="3885.V7B0E3"/>
    <dbReference type="Gramene" id="ESW10343">
        <property type="protein sequence ID" value="ESW10343"/>
        <property type="gene ID" value="PHAVU_009G201200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0342">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EETHMVE"/>
    <dbReference type="OrthoDB" id="10259640at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd17942">
        <property type="entry name" value="DEADc_DDX18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000379">
        <property type="entry name" value="RNA helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044773">
        <property type="entry name" value="DDX18/Has1_DEADc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025313">
        <property type="entry name" value="SPB4-like_CTE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24031">
        <property type="entry name" value="RNA HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13959">
        <property type="entry name" value="CTE_SPB4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01178">
        <property type="entry name" value="DUF4217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="14">
        <location>
            <begin position="72"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="12">
        <location>
            <begin position="103"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="13">
        <location>
            <begin position="308"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="8">
        <location>
            <begin position="72"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="11"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="11">
        <location>
            <begin position="21"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="32"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="65"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW10343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="536" mass="60053" checksum="4B6B0FB880E1863B" modified="2014-02-19" version="1">MAEAEDNDTSSPEREVETKINKKKLRKRKRPNKGEQKQEEKNDVKIDNTLTQAEDEETQVNTNDSSGIMSSDSFSSLTLSEPTSQAIADMGFHLMTQIQARAIPPLLIGKDVLGAARTGAGKTLAFLVPALELLYNSQFTPLNGTGVVVICPTRELAIQTHAVAQELLKYHSLTLGLVIGGSGRKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLECLVIDEADRILEANFEEDMKQIINILPKKRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLQQGYVVVPCAKRFVVLYSFLRRYQSKKVMVFFSSCNSVKFHADLLKCTGLDCLNIHGKQKQHARTTTFFNYCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELKFLHYLKAAKVPVKEYAFDHKKLANVQSQLEKLVAGIYHLNNMAKDAYRSYILAYNAHSMRDIFNVHRLDLLAVATSFCFSNPPKVNLNIDSSASKHRKKVRKVEGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0N2</accession>
    <name>V7B0N2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Methyltransferase</fullName>
            <ecNumber evidence="8">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G002700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Endomembrane system</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 8">Membrane</location>
            <topology evidence="1 8">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="8"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0N2"/>
    <dbReference type="STRING" id="3885.V7B0N2"/>
    <dbReference type="Gramene" id="ESW11110">
        <property type="protein sequence ID" value="ESW11110"/>
        <property type="gene ID" value="PHAVU_008G002700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPN0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KGPIAVW"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000342">
        <property type="entry name" value="Probable methyltransferase PMT19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000451">
        <property type="entry name" value="Probable methyltransferase PMT19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108:SF968">
        <property type="entry name" value="METHYLTRANSFERASE PMT19-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW11110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="580" mass="66765" checksum="2AB67742740FEC6C" modified="2014-02-19" version="1">MMMMVKTNNPCLKILSTILLLVSLIIYIFVAPSFFTSPHLYKHLHLQPSDFEFCPSNYTNHCPCQDPLRARRFPKAKWFRKERHCPERTQRLRCLIPTPPGYQTPFPWPKSKDTAWFSNVPFPKLVEYKKSQNWVRLEGDRFVFPGGGTSFTEGVNGYVHALDRLLPVSLKSGNIRTVLDVGCGVASFGASLMDYDILTMSLAPSDEHQSQVQFALERGLPAMLGVLSIHRLTFPSRSFDMVHCSRCLVPWTAYDGLYLREIDRILRPGGFWVLSGPPINWRVNYKAWEIEPWVLEKEQNIIEDLAKQMCWEKVAERDQIAVWQKHTDHISCMQKLKTLRSPKFCNSSESDPDAGWYTKMTACIFPLPDVKDVHEESGGVLEKWPMRLETVPPRVGNENDDGFTLKAYIKDNQRWKRRVSDYEIMLKSISSGKYRNVMDMNAGFGGFAAAMVKYPVWVMNVVPFDAKSSNLGIIYERGLIGTYMDWCEPFSTYPRTYDLIHASGLFSMYMDKCDIGDIVLEMHRIVRPKGAVIIRDERDVILKVKEITDKMRWKGTVVAGDQNGPFHMEMIMLIDLNDTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7B2G2</accession>
    <name>V7B2G2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Non-haem dioxygenase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G084100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B2G2"/>
    <dbReference type="STRING" id="3885.V7B2G2"/>
    <dbReference type="Gramene" id="ESW12092">
        <property type="protein sequence ID" value="ESW12092"/>
        <property type="gene ID" value="PHAVU_008G084100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RRSW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QICLRNQ"/>
    <dbReference type="OrthoDB" id="1523082at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34945">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34945:SF4">
        <property type="entry name" value="2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="254" mass="28832" checksum="4EB23CCEE3C7E0D3" modified="2014-02-19" version="1" fragment="single">MRRCNSMIPAPLPSPIPTGRGMRSAASETFSHFLEKSLQLPELTLPHLPPAPAEIDLRSLSLGSADLMLRSAREFGAFRIRYHGISSGELLTMADEAERVFEKSRNVVVELNGPDGEMIPCVRSSKGSMEFTAHDIIRDQAHRNFWVHMGNIARRLDSVVEQVSLVLQHNTSIEFMERIQDIESVICLCRYPHDNVPKQKEDSSVKRKDRYCDHGLRFYLPMEKCIFYIQTERGPLSFDTGPHNIVVTVGKQLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7B3A3</accession>
    <name>V7B3A3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">4-hydroxybenzoate polyprenyltransferase, mitochondrial</fullName>
            <shortName evidence="9">4-HB polyprenyltransferase</shortName>
            <ecNumber evidence="9">2.5.1.39</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Para-hydroxybenzoate--polyprenyltransferase</fullName>
            <shortName evidence="9">PHB:PPT</shortName>
            <shortName evidence="9">PHB:polyprenyltransferase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_008G080300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>4-hydroxybenzoate + (2E)-geranyl diphosphate = 3-geranyl-4-hydroxybenzoate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:27854"/>
            <dbReference type="ChEBI" id="CHEBI:17879"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58057"/>
            <dbReference type="ChEBI" id="CHEBI:60878"/>
            <dbReference type="EC" id="2.5.1.93"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>an all-trans-polyprenyl diphosphate + 4-hydroxybenzoate = a 4-hydroxy-3-(all-trans-polyprenyl)benzoate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:44504"/>
            <dbReference type="Rhea" id="RHEA-COMP:9514"/>
            <dbReference type="Rhea" id="RHEA-COMP:9564"/>
            <dbReference type="ChEBI" id="CHEBI:17879"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58914"/>
            <dbReference type="ChEBI" id="CHEBI:78396"/>
            <dbReference type="EC" id="2.5.1.39"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="9">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Mitochondrion inner membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
            <orientation evidence="9">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.39" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B3A3"/>
    <dbReference type="SMR" id="V7B3A3"/>
    <dbReference type="STRING" id="3885.V7B3A3"/>
    <dbReference type="Gramene" id="ESW12044">
        <property type="protein sequence ID" value="ESW12044"/>
        <property type="gene ID" value="PHAVU_008G080300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW12045">
        <property type="protein sequence ID" value="ESW12045"/>
        <property type="gene ID" value="PHAVU_008G080300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1381">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCMIYDT"/>
    <dbReference type="OrthoDB" id="18170at2759"/>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102930">
        <property type="term" value="F:4-hydroxybenzoate geranyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008412">
        <property type="term" value="F:4-hydroxybenzoate polyprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13959">
        <property type="entry name" value="PT_UbiA_COQ2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.120.1780:FF:000001">
        <property type="entry name" value="4-hydroxybenzoate octaprenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.357.140:FF:000003">
        <property type="entry name" value="4-hydroxybenzoate polyprenyltransferase, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1780">
        <property type="entry name" value="UbiA prenyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01635">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006370">
        <property type="entry name" value="HB_polyprenyltransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039653">
        <property type="entry name" value="Prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01474">
        <property type="entry name" value="ubiA_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11048:SF28">
        <property type="entry name" value="4-HYDROXYBENZOATE POLYPRENYLTRANSFERASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11048">
        <property type="entry name" value="PRENYLTRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="9" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="154"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="320"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="375"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW12045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="396" mass="43536" checksum="FBE9C1AC32660231" modified="2014-02-19" version="1">MASSLIFRASRRFLKPSSSSSVSLHLATFNPLSSAQQFATQNRNPTLNAPFNPPQLQNYNFEFRKTVGSLSNFHLVAHVSTRPSKEDRNQSGSVSNGGGGDATWVDLYLHKQVQPYARLARLDKPIGTWLLLWPCIWSITLAATPGHLPDFKMMTLFACGALLLRGAGCTINDLLDRDIDTMVERTKLRPVASGLLTPFQGLCFLGFQLLLGLGILLQLNNYSRVLGASSLFLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWITGFGIACLGGLALSGFNAEIGWPYYASLGVASGHLGWQIWTVDLSSRADCNRKFVSNKWFGAIIFGGILAGRLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B416</accession>
    <name>V7B416_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Xyloglucan endotransglucosylase/hydrolase</fullName>
            <ecNumber evidence="9">2.4.1.207</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G129100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Secreted</location>
            <location evidence="9">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Secreted</location>
            <location evidence="9">Extracellular space</location>
            <location evidence="9">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="9">Contains at least one intrachain disulfide bond essential for its enzymatic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the glycosyl hydrolase 16 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.207" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B416"/>
    <dbReference type="SMR" id="V7B416"/>
    <dbReference type="STRING" id="3885.V7B416"/>
    <dbReference type="Gramene" id="ESW12632">
        <property type="protein sequence ID" value="ESW12632"/>
        <property type="gene ID" value="PHAVU_008G129100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXRM">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TWGNSHV"/>
    <dbReference type="OrthoDB" id="2015456at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016762">
        <property type="term" value="F:xyloglucan:xyloglucosyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042546">
        <property type="term" value="P:cell wall biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010411">
        <property type="term" value="P:xyloglucan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000757">
        <property type="entry name" value="Beta-glucanase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044791">
        <property type="entry name" value="Beta-glucanase/XTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010713">
        <property type="entry name" value="XET_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016455">
        <property type="entry name" value="XTH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31062">
        <property type="entry name" value="XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00722">
        <property type="entry name" value="Glyco_hydro_16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06955">
        <property type="entry name" value="XET_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005604">
        <property type="entry name" value="XET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="Concanavalin A-like lectins/glucanases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51762">
        <property type="entry name" value="GH16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-0052">Apoplast</keyword>
    <keyword evidence="1 9" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7 9" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0964">Secreted</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005148960" description="Xyloglucan endotransglucosylase/hydrolase" evidence="9">
        <location>
            <begin position="26"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="GH16" evidence="10">
        <location>
            <begin position="5"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR005604-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW12632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="289" mass="34097" checksum="B4FEBD23DBA0C68D" modified="2014-02-19" version="1">MVHLHKQQNFCYALLLFVALAIVYARKSDEVSFQQNYKVVWGNHHVFFLQHGREVQLSIDKTSGAGFRSKLEYASGFFHMRIKIPNKDSRGVVTAFYLTSTVYEGMGEKHDEIDFEFLGNNGEPHMLQTNIFANDEGGREQRHSLWFDPTIDFHTYGLLWNQHQIVFYVDEIPIRVFKNNSEVGVSFPLQEMHVTASIWNGEPWASNGKRIDWNQAPFTAHFEGFNIHACQTQNHYKFLCYSPYLWWNDHKHWQLNPHQQKAYQYVTKKHLVYDYCSDRGQLHKECQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B509</accession>
    <name>V7B509_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">BURP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G158600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="STRING" id="3885.V7B509"/>
    <dbReference type="Gramene" id="ESW12992">
        <property type="protein sequence ID" value="ESW12992"/>
        <property type="gene ID" value="PHAVU_008G158600g"/>
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    <dbReference type="OrthoDB" id="654134at2759"/>
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        <property type="component" value="Chromosome 8"/>
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        <property type="entry name" value="BURP DOMAIN PROTEIN RD22"/>
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        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756274" description="BURP domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="340"/>
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        <location>
            <begin position="130"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS51277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
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    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="340" mass="36925" checksum="33EA547489E49EB8" modified="2014-02-19" version="1">MEFHILPIVTFLMLGVAASAALSPEFYWKSVLPTTPMPKAITDLLHPDWKEEKDGSADVGNGVNVGVEKGNQGQGGGTDVNVGGGNGGVNVHAGPKGKPVHVGVGPHSPFDYTYGASETQLRDDPNLVLFFLEKNLHHGTKLDLLFSQTSNAEATFLPRPLADSIPFSSNKVNDILHRFSIKAWSDEAQVVKNTISECERPIIKGEEKRCVTSLESMVDFATSKLGNNVGAISTNVKKESKWQHYKIAAGVKKLGEKSVVCHKEKYPYAVFYCHKSDSSKAYSVPLEGADGSRVKAVAVCHTDTSNWNPKHLAFQVLKVQPGTVPICHFLPQGHVVFVPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7B580</accession>
    <name>V7B580_PHAVU</name>
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        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
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    </protein>
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        <name evidence="4" type="ORF">PHAVU_008G045300g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
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            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
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        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
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        <property type="gene ID" value="PHAVU_008G045300g"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="DUF4408 DOMAIN-CONTAINING PROTEIN"/>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
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            <end position="91"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
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    </feature>
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        </source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
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</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5H0</accession>
    <name>V7B5H0_PHAVU</name>
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        <recommendedName>
            <fullName evidence="2">WW domain-containing protein</fullName>
        </recommendedName>
    </protein>
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            <taxon>Magnoliopsida</taxon>
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            <taxon>fabids</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
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    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
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                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
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            <strain evidence="4">cv. G19833</strain>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
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    </dbReference>
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        </location>
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        </location>
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        </location>
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            <begin position="582"/>
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        </location>
    </feature>
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        <location>
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        <source>
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        <source>
            <dbReference type="PROSITE" id="PS50020"/>
        </source>
    </evidence>
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        <source>
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    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="934" mass="101804" checksum="9F217F7B650B7DED" modified="2014-02-19" version="1">MGKRKERRLAALSNTGRRLKLDLFAEPSGELGGSTLHGDAGGDTDSQHRDGLPNSPSSSGQESQNPLLLLGQYSDDEGDDRSSRGLNDVNLQSPVLNEEGKGELDDGSKDLNISVSADLVPHNNEQQNAMPNSTSLDVGSCGRNESHGVTENLENGMVSKDQIYVSESFDERVVTDVGLGWKIVMHEESQSYYYWNTETGETSWEVPQVLAPADQLPHASVNDKTEGAAVGDSSSVPSTGMLDTSAAFTTDTSLDATRTSHKELCGHGSQMNGGSVECRSQNQGSDDNGNELTRDDGHMSISEDQHHSSVSKSSIEEQQADIDFPSRLVNQCESLLERLQSLKKSKENLQGQEFLSKYMLEIEIRLSDIRCLASYGSSLLPFWMHSDRKINLLESLINDDLLETGKSSHDEVEDKHVPVSEELGDQLNGMEHESEVDQNNNKGSLLTSDASNGSQVDALAVVVKDINNNLFTNGQHVPSSSSPGSHMESYVEINSKAEAVINPQEPIHKHGYVSSEDVDMDVDMEVEDMNSSDNTTVIDVPVAKDSVQTDQVVQLNPPIDYHSVLLEEGEFVVPPPPDDEWIPPPPPDNEHVPPPPPDNEHVPPPPPPDDQVPPPPGDPLPPSYSVLPSYAETGQPLSYAQYTLSYPGVAVEYYGQTAAEVPCSNIYGQIAIPPAQIYYNSAIPNMYSESPQVMINPTDTVAYYDVQDGAGSQSIPAININGSGVGEANWVSSDVPSTSSSIHAPATVSVDEGVSLPPASSETAAENNAPSIASKPQSKVVRTRKRAVAVGSSLKSNKKVSSLVDKWKAAKEEMLEEEEEEPDSVYEALERKRQREIEEWHAKQIASGEAKDNANFQPLGGDWREKVKRKRAQAAKESVSKPQDAIKQNQQQPDPNELAKGLPSNWQAYWDDSTKQVYYGNTITSETTWTRPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7B7A0</accession>
    <name>V7B7A0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_008G137300g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B7A0"/>
    <dbReference type="Gramene" id="ESW12728">
        <property type="protein sequence ID" value="ESW12728"/>
        <property type="gene ID" value="PHAVU_008G137300g"/>
    </dbReference>
    <dbReference type="OMA" id="YVTHIIS"/>
    <dbReference type="OrthoDB" id="1924025at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33132:SF135">
        <property type="entry name" value="OS02G0799700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33132">
        <property type="entry name" value="OSJNBB0118P14.9 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW12728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="145" mass="16367" checksum="37CA51FF59FE3AE7" modified="2014-02-19" version="1">MSRVRGEELILLRKRTMERKKNVTESKQENISKKKSNISGHNKKNEGGKELLKVIMEETENLSIKESKEKSGTHSKACYCAPTTHEGSFRCRLHRKKSATCSNNNPMMNSKCTKGIIEFQGFVRVPSVQVGTHGSLLKLSRMDSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7B884</accession>
    <name>V7B884_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BZIP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G247800g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B884"/>
    <dbReference type="SMR" id="V7B884"/>
    <dbReference type="STRING" id="3885.V7B884"/>
    <dbReference type="Gramene" id="ESW14039">
        <property type="protein sequence ID" value="ESW14039"/>
        <property type="gene ID" value="PHAVU_008G247800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQKB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TGEMMSH"/>
    <dbReference type="OrthoDB" id="1435597at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14703">
        <property type="entry name" value="bZIP_plant_RF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.170:FF:000009">
        <property type="entry name" value="probable transcription factor PosF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004827">
        <property type="entry name" value="bZIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044759">
        <property type="entry name" value="bZIP_RF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046347">
        <property type="entry name" value="bZIP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13690:SF122">
        <property type="entry name" value="ATBZIP TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13690">
        <property type="entry name" value="TRANSCRIPTION FACTOR POSF21-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00170">
        <property type="entry name" value="bZIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00338">
        <property type="entry name" value="BRLZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57959">
        <property type="entry name" value="Leucine zipper domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50217">
        <property type="entry name" value="BZIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BZIP" evidence="8">
        <location>
            <begin position="164"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="288"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="343"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="182"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="55"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="349"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW14039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="363" mass="39169" checksum="E3234E623221992B" modified="2014-02-19" version="1">MQDPSSNPNSNPNPHNANAASQPPRPSPSTAATTAGASSSSIFPRSGGTHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGAAGNGVDPTGDREKSPARARHRHSSSVDDSSFGEIMEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKLATGEMMSHTESFNLGMHHIPFTGSTFSPILSQSGPSGHQNIHLSFGHSPSTMPTHQLHQTSSHPLSEILQNDQLGRFQGLDISSKGSTVVKSEGPSLSASESSTTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BAN7</accession>
    <name>V7BAN7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Zinc finger PHD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G238400g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BAN7"/>
    <dbReference type="SMR" id="V7BAN7"/>
    <dbReference type="STRING" id="3885.V7BAN7"/>
    <dbReference type="Gramene" id="ESW13928">
        <property type="protein sequence ID" value="ESW13928"/>
        <property type="gene ID" value="PHAVU_008G238400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1844">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RCSGWSH"/>
    <dbReference type="OrthoDB" id="436852at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15556">
        <property type="entry name" value="PHD_MMD1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057765">
        <property type="entry name" value="MS1-like_ubiquitin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059080">
        <property type="entry name" value="WHD_PTC1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058054">
        <property type="entry name" value="Znf_MS1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46201:SF9">
        <property type="entry name" value="PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46201">
        <property type="entry name" value="PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25565">
        <property type="entry name" value="Ubiquitin_At1g33420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25874">
        <property type="entry name" value="WHD_plant_repro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Zinc finger PHD-type" evidence="6">
        <location>
            <begin position="620"/>
            <end position="666"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="702" mass="79108" checksum="58D043D5B677DCA7" modified="2014-02-19" version="1">MSFALIEACKKRKRWPKFFRFNSFGDPGIPIVPLGTFRDNVRVFLQEAGEPEDYSVSGNPLWCTLLIHDKSNVMAPLYTVEEHVCHSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDSGWHKPLDEESIENQRHLLHGVIHCNGYGHLLCVNGIEGGSKVLSGREIMDLWDRVCTNLRVRKVAVEDVSCKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTEPDYNEAMTTLGSLELDMIAKDLNKTKFNKEIKQMIRCYRDMSETHIISLRDLLRFMLTVKSSRAPAPKITVTFSAAAVAADSTCSALISRNSTKHTLPTRSNSIKEKSVRYKKFSNAVTSMDSRWPTRRLEFAAQVIVDALKENKAVKPGTGGMARQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPSSRILEYTIHDLGKGYKAPEQESEGMAYVDQQVVESSWVPGNDVYCDVLFLYKNVLLGYPDSETVDLAIQTILDSRYFVKEWAERDEVEEQLLTFICRLQPNFVDKKYELKGLPCGEVVVVPLHATVGDLKRASEAALRDTYCIAERLIVTDIKQLMGVSDEEVLFGLIQSGVELCVRGIAIDLCTNLKYQGGSDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCTGCCDSLVPSRTESSFCADSPDSFLISADPSLLLEYEYGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BB75</accession>
    <name>V7BB75_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G042300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BB75"/>
    <dbReference type="SMR" id="V7BB75"/>
    <dbReference type="STRING" id="3885.V7BB75"/>
    <dbReference type="Gramene" id="ESW15079">
        <property type="protein sequence ID" value="ESW15079"/>
        <property type="gene ID" value="PHAVU_007G042300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1672">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CVIAFID"/>
    <dbReference type="OrthoDB" id="10257948at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="CDD" id="cd02989">
        <property type="entry name" value="Phd_like_TxnDC9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21148">
        <property type="entry name" value="THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="2">
        <location>
            <begin position="75"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="184"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="184"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW15079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="213" mass="24484" checksum="71D090C0419D259E" modified="2014-02-19" version="1">MEKGKIQEVIEQQVLTVARAFEDKIDDEIAALDRLDPDDIEAIRERRLQQMKKMAENRSRWISLGHSEYSEIPSEKDFFSVVKASERVVCHFYRENWPCKVMDKHLNLLAQQHIETRFVKINAEKSPFLAEKLKIIVLPTLALIKNAKVDDYVVGFDELGGTDDFKTEELEERLAKAQVISYEGESSFNQGRSSAKTTRTVRQSSRADSSDSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBB1</accession>
    <name>V7BBB1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G222700g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBB1"/>
    <dbReference type="SMR" id="V7BBB1"/>
    <dbReference type="STRING" id="3885.V7BBB1"/>
    <dbReference type="Gramene" id="ESW13746">
        <property type="protein sequence ID" value="ESW13746"/>
        <property type="gene ID" value="PHAVU_008G222700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RDXR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MESYHYS"/>
    <dbReference type="OrthoDB" id="71302at2759"/>
    <dbReference type="PhylomeDB" id="V7BBB1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11455">
        <property type="entry name" value="bHLH_AtAIG1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045847">
        <property type="entry name" value="AIG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45844">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45844:SF18">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00010">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00353">
        <property type="entry name" value="HLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="6">
        <location>
            <begin position="66"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW13746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="257" mass="28405" checksum="946C799B3F155C8E" modified="2014-02-19" version="1">MESYHYSGWPLATNMAQCNSAPNSDQLSPFSVPTTQTLPLASDPASLQFSEFPLWPATIAEDRVASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMCVSKAITVPTETDEVKIDFHEAKDESYTKVKILKENIIIKASVCCDDRPEVFPELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEENSVCLSTLKQSLKSAVNKIASLSVATNCPTRSKRQRFFFPSHYVQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBU8</accession>
    <name>V7BBU8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Isocitrate dehydrogenase [NADP]</fullName>
            <ecNumber evidence="9">1.1.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G239900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>D-threo-isocitrate + NADP(+) = 2-oxoglutarate + CO2 + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19629"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9 12">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="9 12">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="9 12">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="9"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBU8"/>
    <dbReference type="SMR" id="V7BBU8"/>
    <dbReference type="STRING" id="3885.V7BBU8"/>
    <dbReference type="Gramene" id="ESW13946">
        <property type="protein sequence ID" value="ESW13946"/>
        <property type="gene ID" value="PHAVU_008G239900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1526">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="248923at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004450">
        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006102">
        <property type="term" value="P:isocitrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006739">
        <property type="term" value="P:NADP+ metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010043">
        <property type="term" value="P:response to zinc ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.718.10:FF:000007">
        <property type="entry name" value="Isocitrate dehydrogenase [NADP]"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.718.10">
        <property type="entry name" value="Isopropylmalate Dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004790">
        <property type="entry name" value="Isocitrate_DH_NADP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00127">
        <property type="entry name" value="nadp_idh_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF006156">
        <property type="entry name" value="PRK08299.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822:SF21">
        <property type="entry name" value="ISOCITRATE DEHYDROGENASE [NADP], MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822">
        <property type="entry name" value="NADP-SPECIFIC ISOCITRATE DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000108">
        <property type="entry name" value="IDH_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53659">
        <property type="entry name" value="Isocitrate/Isopropylmalate dehydrogenase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8 9 12" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 9 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9 13" id="KW-0521">NADP</keyword>
    <keyword evidence="7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Isopropylmalate dehydrogenase-like" evidence="14">
        <location>
            <begin position="11"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="77"/>
            <end position="79"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>D-threo-isocitrate</name>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="96"/>
            <end position="102"/>
        </location>
        <ligand>
            <name>D-threo-isocitrate</name>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>D-threo-isocitrate</name>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>D-threo-isocitrate</name>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="312"/>
            <end position="317"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="10">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="10">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW13946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="412" mass="45975" checksum="35107A0E50D76E5B" modified="2014-02-19" version="1">MAFQKINVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTTDSAEATLKYNVAIKCATITPDEARVKEFGLKQMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDSVIKGAGKLTLVFVPEGGGEKTELEVFNFKGEGGVSLAMYNTDESIRSFAEASMTTALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELRDKISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BC70</accession>
    <name>V7BC70_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="22">Cysteine-rich receptor-like protein kinase 29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_007G048500g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BC70"/>
    <dbReference type="SMR" id="V7BC70"/>
    <dbReference type="STRING" id="3885.V7BC70"/>
    <dbReference type="Gramene" id="ESW15150">
        <property type="protein sequence ID" value="ESW15150"/>
        <property type="gene ID" value="PHAVU_007G048500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWDY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKFATEN"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009737">
        <property type="term" value="P:response to abscisic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000142">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000002">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000343">
        <property type="entry name" value="Cysteine-rich receptor-like protein kinase 28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000003">
        <property type="entry name" value="Cysteine-rich RLK (RECEPTOR-like protein kinase) 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002:SF1104">
        <property type="entry name" value="CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 27-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27002">
        <property type="entry name" value="RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-0675">Receptor</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="6 17" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754388" description="Cysteine-rich receptor-like protein kinase 29" evidence="17">
        <location>
            <begin position="27"/>
            <end position="677"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="19">
        <location>
            <begin position="34"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="19">
        <location>
            <begin position="146"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="18">
        <location>
            <begin position="345"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="650"/>
            <end position="677"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW15150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="22">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="677" mass="76171" checksum="B3F45642DC3764B0" modified="2014-02-19" version="1">MPLLLPRLLFFLWCLPITFFISQVSAVNNTQNFHYFCDDTNDQGNYTTNSTYHTNLNTLLSTLISNTEIDYGFYNFTNGENTDKVYAIGLCRGDIKPDECRRCLNDSRANLTELCPNRKEVIGWYEDEKCMLRYSNRSIFGLMETGKPAYFVWNSDHATQAEEFNKVLRDLLDGMRSRAASGDSQSKYATAKATGPDDKTIFGLAQCTPDLSEQDCNNCLIQSMEEFGNCCDSKIGARVVRPSCNLRYETSLQFYGAAAYTPSNTSSEGKSNTVIIAIATAVPAIVIVSAVVIFIYIRLIARKSWKKFETKQEEEELYDDDDDGIDASESLQIRFSIIREATDDFSDSNKLGQGGFGAVYRGTLPDGQEIGVKRLSANSRQGNTEFKNEVLLLAKLQHRNLVRLLGFCMEGREKLLVYEFVPNKSLDYFIFDKTKRAQLDWYTRFKIIAGTARGILYLHQDSRLRIIHRDLKAGNILLDEGMNPKIADFGLARLFVVDQTHEDTQRVVGTFGYMAPEYALHGQFSEKSDVFSFGVLVLEIVSGQKISSIQHGEETGDLRHIAWRSWREGRATDIVDQTLNDGSESEIMRCIHIGLLCVQDNVAARPTMASVVSMLNSPSLSLQVPMAPAFYGNAMSGIFEDMQLREINSGTTRSNESTNRKDQDSLSEASITEPYPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BFC3</accession>
    <name>V7BFC3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">NAC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_007G085600g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BFC3"/>
    <dbReference type="SMR" id="V7BFC3"/>
    <dbReference type="STRING" id="3885.V7BFC3"/>
    <dbReference type="Gramene" id="ESW15598">
        <property type="protein sequence ID" value="ESW15598"/>
        <property type="gene ID" value="PHAVU_007G085600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT9T">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANQVDYQ"/>
    <dbReference type="OrthoDB" id="645697at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="2.170.150.80:FF:000002">
        <property type="entry name" value="Nac domain-containing protein 86"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.80">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003441">
        <property type="entry name" value="NAC-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036093">
        <property type="entry name" value="NAC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744:SF216">
        <property type="entry name" value="NAC TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31744">
        <property type="entry name" value="PROTEIN CUP-SHAPED COTYLEDON 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02365">
        <property type="entry name" value="NAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101941">
        <property type="entry name" value="NAC domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51005">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0010">Activator</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="523"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="domain" description="NAC" evidence="12">
        <location>
            <begin position="19"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW15598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="552" mass="62059" checksum="85F400AA2BC5D9C3" modified="2014-02-19" version="1">MGEASGDGNADCFSQMMASMPGFRFHPTDEELVMYYLKRKICGKRLKLNVIRETDVYRWDPEELPGQSILKTGDRQWFFFCPRDRKYPNGARSNRATRHGYWKATGRDRNVICNSRAVGVKKTLVFYIGRAPSGTRTDWVMHEYTMDEEELKRCQGVKEYYALYKVFKKSGAGPKNGEQYGAPFSEQEWAADDDIVDFNIKITDQEAPNVVSENGNVLHPLLDDEINDIIREILDDELVLDQQHVNGFLDFPQVVTEETQSTVVDQFSEAVMFPETINSCCEFFDVQPSFEFNQPVTSHLQVSEASEVSSASNVKTKGLDLDEDGFLEINDLIDTEPTLANVENPVEHLRFEDGLSELDLYQDAEMFLRDLGANEYTNALVSNNIESQTYQLLCNPEDANQTVGEFWIHGERNTLSPSEEGFVDSFSLPSAGVVCESLSFPEEGNYNQSSTVEDVSTSSFSSSLWAFVESIPTTPASAAESALVNRALNRMSSFSRVKIRHTNIAAGKETATTKKAGRKGFSFLFFPILIALCAFLWVFVGSLRLLGRCISP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="61" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGV7</accession>
    <name>V7BGV7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_007G209700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGV7"/>
    <dbReference type="Gramene" id="ESW17092">
        <property type="protein sequence ID" value="ESW17092"/>
        <property type="gene ID" value="PHAVU_007G209700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0055">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015421">
        <property type="term" value="F:ABC-type oligopeptide transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010329">
        <property type="term" value="F:auxin efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010328">
        <property type="term" value="F:auxin influx transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090374">
        <property type="term" value="P:oligopeptide export from mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18577">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18578">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_MTABC3_MDL1_MDL2"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="ABC transporter B family member 1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC transporter B family member 1"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="ABC transporter B family member 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF16">
        <property type="entry name" value="ABC TRANSPORTER B FAMILY MEMBER 4-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="78"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="181"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="609"/>
            <end position="632"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="653"/>
            <end position="676"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="742"/>
            <end position="773"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="834"/>
            <end position="853"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="14">
        <location>
            <begin position="14"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="13">
        <location>
            <begin position="280"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="14">
        <location>
            <begin position="613"/>
            <end position="899"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="13">
        <location>
            <begin position="934"/>
            <end position="1171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="522"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="526"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="539"/>
            <end position="552"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW17092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1179" mass="128521" checksum="CA5A91580BFFCD66" modified="2014-02-19" version="1">MKNKHNIKVELREAFDFSEVSCWTVTGERQTTRIRGLYLKTVLRQDIAFFDEETNTGEVIGRISGDTILLQDAMGEKVGRFLQLIATCTGGFVIASVKGWLLTVVMLSTFPLLVLSGAAMAFTIERFASRGQTDYAKAARVVEQTIGSIRTVAAFTGEKQAVSSYKTDLAHAYKSGIQEGCIYGVGTGTLLFVTLGTYALGVWFGAKLIMEKGYSGGTVMNVIFSILIGSSSLGQTSPCINAFALGQAAAHKMFQTIERKPQIDAYDPNGKILEDIEGEIELRDVYFSYPSRPEELIFDGFSFHIKSGTTAALVGQSGSGKSTVISLVERFYDPHAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFSCSIEDNIAYGKEGATIEEIRSAAELANAAKFIDKLPQGLNTLVGDYGSKLSGGQKQRIAIARAILKNPRILLLDEATSSLDVESERIVQEALNRIMINRTTIVVAHRLSTVKNADTIAIIHKGKMIEKGTHSELLKEDGAYSQLIRLQEINNDSEESADHHSKNEISGESFRQSSQRRSFQRSISRDSSKGNSSTHSYSVSFGLSKGVNVPHSELENSQPKEQAPEVPLSRLASLNKPEIPVLLIGCVAAIANGLVNPIYGLLISMAMKTFYEPFDQMQKDSKFWALMFITVGFAAFLTNVGQGYFFSVAGFKLIHRIRLMCFEKVVNMEVGWFDEPENSSGAISARLFADAALVRALVGDALGLLVQNSASALAGLIIAFTASWQMTLVILVLVPILGFNFYVKMKLLKKFTADVKMMYEEASQVANDAVRSIRTVASFCAEDKVMEMYRKKCENPIKAGRQGGLINGLAFALSLFTLLSFQATGFYAGARVVEAGKAPFSDVLRVFFALILVTAGISQSTSLGPDSSKAKSATASIFRMLDKKSKIDPSDESGITLDSVKGEIELRHVSFKYPSRPDIPIFQDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIRELQLKWFRQQMGIVSQEPVLFNETIRANIAYGKEGNATEAEVIAATELANAHTYISALQQGYDTLVGERGTQLSGGQKQRVAIARAIIRSPKILLLDEATSALDAESERVVQDALEKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEELINVCGGFYASLLQLHTSASTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH20</accession>
    <name>V7BH20_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G218700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH20"/>
    <dbReference type="STRING" id="3885.V7BH20"/>
    <dbReference type="Gramene" id="ESW17194">
        <property type="protein sequence ID" value="ESW17194"/>
        <property type="gene ID" value="PHAVU_007G218700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S70H">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PENRAKE"/>
    <dbReference type="OrthoDB" id="1936089at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004926">
        <property type="entry name" value="LEA_3a"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509">
        <property type="entry name" value="LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33509:SF5">
        <property type="entry name" value="PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03242">
        <property type="entry name" value="LEA_3a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW17194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="10403" checksum="A640DAA6E80F54F8" modified="2014-02-19" version="1">MARSFTTVKVLSALVADGFSNTLTRRGFAAAAATQSATRGGGASISGNITPKSGEEKGRGAEKVSWVPDPVTGYYKPENTNEIDVADLRAMVLGKKFNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BH56</accession>
    <name>V7BH56_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G1906000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BH56"/>
    <dbReference type="STRING" id="3885.V7BH56"/>
    <dbReference type="Gramene" id="ESW16860">
        <property type="protein sequence ID" value="ESW16860"/>
        <property type="gene ID" value="PHAVU_007G1906000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4162">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIKLEAG"/>
    <dbReference type="OrthoDB" id="29013at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043376">
        <property type="entry name" value="NPG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44102">
        <property type="entry name" value="PROTEIN NPG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44102:SF12">
        <property type="entry name" value="PROTEIN NPGR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW16860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="494" mass="55087" checksum="9683424D2C913259" modified="2014-02-19" version="1" fragment="single">MKCLRSGESFGGADEVFPSSGSLASATKDFSASEHSCLAEHIDKKQDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKIALSRSRERRKRHSQNHAEPQMSIHSVGLLLESVFLKAKSLQILERFKEAAQSCKVILDIVESSLPEGLPDNFGAECKLQETLNKAVELLPDLWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILILMILLRKVTLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPRTIHRSERYYALALCYYGAGKDLVALDFLRKLLSSRENQDHAPGLLLASKICCENCSLAEEGVTFAKRVLQNLDGRCDQLEDHANFFLGVSLSAQSKLAISDSEMFKRQSEALHALETAARTRNPLVLYHLSLEYAEQRKLDAALQYAKCCIKLEAGTNIKGWLLLARILSAQKQFLDAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHS3</accession>
    <name>V7BHS3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF4378 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G155800g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHS3"/>
    <dbReference type="SMR" id="V7BHS3"/>
    <dbReference type="STRING" id="3885.V7BHS3"/>
    <dbReference type="Gramene" id="ESW16428">
        <property type="protein sequence ID" value="ESW16428"/>
        <property type="gene ID" value="PHAVU_007G155800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQCF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QETGWID"/>
    <dbReference type="OrthoDB" id="1932693at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022212">
        <property type="entry name" value="DUF3741"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025486">
        <property type="entry name" value="DUF4378"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46634:SF8">
        <property type="entry name" value="DUF3741 FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46634">
        <property type="entry name" value="M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12552">
        <property type="entry name" value="DUF3741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14309">
        <property type="entry name" value="DUF4378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3741" evidence="2">
        <location>
            <begin position="127"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4378" evidence="3">
        <location>
            <begin position="707"/>
            <end position="877"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="196"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="430"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="487"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="201"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="224"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="434"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="445"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="487"/>
            <end position="499"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW16428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="887" mass="100306" checksum="9934355684F45A4B" modified="2014-02-19" version="1">MQMLIDKEMSKQKDSKHYLPNVVAKLMGLETLPRGEPNLPMERKYRSDYSQQMHGPVGLPFRHWQQEDRFMDRKMFHEVHPSTEQVAYKDMYEIWQQSQRTSHASGKVPDRGRWSEDVDGKRMALIRQKFIEAKLLSTDERLRQSKQFKDALEVLSSNSDLLMRLLDSQNVYEFYSTPRTDTNRITLIKPLKMVDNDKPARKEKRNNRLIKKSANVDQAAGWENKNSGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKDGVSPTTTTPLNLKSGICHQGPEYDDVIESFKVAKEIRQQMHRGLRSYQKDKTPHYSSGYSDDESSFNKSYHEYASANFSDSMSMSPLPRLSWDCNYINGCSSPYSTMSLGRMSCSPESSVCREAKKRLSERWTMMTSGNKGHQEQMNARRNSTLGEMLSLAHMKKSEASVVESIKEDQEPRKSVSCSHSFNAEISTEGSPKNLPRSNSVPAISAVTETGLTVQVGNQNTVKSQASRAQTKSKRRSSLKEKVASLLFSKNKKSTKEKPSPPQCKDASQPSPIVTESLVLPANAPEVLRDNVDSFEEFSLVALCESSEKTSTDSVSNRQEDMITLEPALTVAGSMMLKINSSESPDQPSPFSVLQPPFEDDNNYVSHETLDCMKSDQLGSQVQLKSNLIDKTPPIESIARTLSWDDSSAEVMSPHLLKRLMIPSLDSKVEEKEWLLLVHKLLSAAGLDDQQQYDSFYTKWYSLESPLDPSLRDTLYINLNEKEPQPMHERRRRKMRSDHKLLFDYINAELLELVGHGSGKCLKGSGSHCRVLLQERASASPLLVDHIVAKIKELMASGVRCEQDSNSLVVENVVRKEIVQIGWVELMELEIDILGKEIEGDLIQELLENAVVDFTGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHU4</accession>
    <name>V7BHU4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotransferase class V domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_007G209500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHU4"/>
    <dbReference type="SMR" id="V7BHU4"/>
    <dbReference type="STRING" id="3885.V7BHU4"/>
    <dbReference type="Gramene" id="ESW17090">
        <property type="protein sequence ID" value="ESW17090"/>
        <property type="gene ID" value="PHAVU_007G209500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1549">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCIFDVV"/>
    <dbReference type="OrthoDB" id="5978656at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080146">
        <property type="term" value="F:L-cysteine desulfhydrase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019450">
        <property type="term" value="P:L-cysteine catabolic process to pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43092">
        <property type="entry name" value="L-CYSTEINE DESULFHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43092:SF7">
        <property type="entry name" value="L-CYSTEINE DESULFHYDRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotransferase class V" evidence="3">
        <location>
            <begin position="95"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW17090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="458" mass="51080" checksum="480C25FBF131B16F" modified="2014-02-19" version="1">MTTLPQSHNSIPNPGNGAVEHNHHAAKKPKLGHPISDSEIREEFSHHQRGVARINNGSFGSCPRSVLAAQSACQLRFLQQPDEFFFNVLRGGILESRTTVADLINADHVDRIALVDNATTAAAIVLQQIGRRFVRGHFRREDSVIMFHCAYQAVKKSIEAYVTPIGGTIVEVQLPFPVRSDEEIVTEFKKGIEKGKLNGGRVRLAIIDHITSMPSVVLPVRELIKICREQGVEQIFVDGAHAIGSLPVDVKEIGADFYVSNLYKWFFSPPSVAFLYCKENSNDVHHPIVSQEYGKGLPVESAWVGMRDYSPQLVVPSILEFVNRFEGGIEGIMQRNHDAVVKMGTMLAESWGTILGSPPEMCAGMIMVGLPSKLCVMCDDDALRLRSYLRVYHAIEVPVYYQVLRNDDRDPRDKDGFITGYVRISHQVYNTVDDYQRLKTAINKLLEDGKICSGLPTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BHY3</accession>
    <name>V7BHY3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G212700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BHY3"/>
    <dbReference type="STRING" id="3885.V7BHY3"/>
    <dbReference type="Gramene" id="ESW17125">
        <property type="protein sequence ID" value="ESW17125"/>
        <property type="gene ID" value="PHAVU_007G212700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S30Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FAEDNCK"/>
    <dbReference type="OrthoDB" id="1899142at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34188">
        <property type="entry name" value="OS01G0299500 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34188:SF5">
        <property type="entry name" value="OS05G0131900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW17125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="241" mass="26140" checksum="DACF345D6B2632A4" modified="2014-02-19" version="1">MSHTIPREKDVAFDLESGGNTSEEDVGKDRCVGDKESKGVLGWEGNDGVPNIDGTDKGKTEIESFRNSAKSGDVVIIDENNLELFVDRGVVQQQLSNVNGNHAKQKIRPLYPKKPPKPPLPPTGPSLDAGDQKFVKELAELALRKRARVKKMKAVRKMKANKSSSSSSYTSLSAMVITVLFFLVIILHGMRSVSSASVGVMDSPEAAFGADEGLISVHLPSDFNTNEGDVPGSHYSFLQER</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BII8</accession>
    <name>V7BII8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_007G146500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BII8"/>
    <dbReference type="STRING" id="3885.V7BII8"/>
    <dbReference type="Gramene" id="ESW16316">
        <property type="protein sequence ID" value="ESW16316"/>
        <property type="gene ID" value="PHAVU_007G146500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3385">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CPGFLVI"/>
    <dbReference type="OrthoDB" id="261831at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW16316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="74" mass="8034" checksum="C027AAFB83D5E985" modified="2014-02-19" version="1" fragment="single">MNARRDGRNNRVALFNGIEEGGIRASSLYSTSSHDNDQALDGLQDGVNLLKRVSLLLLATCPGFLVISFILTID</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKG1</accession>
    <name>V7BKG1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G044500g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Matrix side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the complex I NDUFA12 subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKG1"/>
    <dbReference type="STRING" id="3885.V7BKG1"/>
    <dbReference type="Gramene" id="ESW18479">
        <property type="protein sequence ID" value="ESW18479"/>
        <property type="gene ID" value="PHAVU_006G044500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXT2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVRHFPP"/>
    <dbReference type="OrthoDB" id="274641at2759"/>
    <dbReference type="PhylomeDB" id="V7BKG1"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045271">
        <property type="term" value="C:respiratory chain complex I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007763">
        <property type="entry name" value="NDUFA12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12910:SF1">
        <property type="entry name" value="NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12910">
        <property type="entry name" value="NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05071">
        <property type="entry name" value="NDUFA12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="91"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="91"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="140"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="164"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW18479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="183" mass="20548" checksum="E3CC348D1651ACD1" modified="2014-02-19" version="1">MRRLLGKISGLFSNRSKVGIDKAGNKYFTRNEEVDGVMKEKRWVIFKKEEDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEQERVAKEGTKGKRVSTGKTSGPDLKSFIQQFSVPSEGNDVEESSSTTGGLRNPQESLAEKTKDQSESSEATGSGASFRPGTWQPPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKN3</accession>
    <name>V7BKN3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glycerophosphodiester phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.46</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_006G0504000g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a sn-glycero-3-phosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12969"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:83408"/>
            <dbReference type="EC" id="3.1.4.46"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycerophosphoryl diester phosphodiesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.46" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKN3"/>
    <dbReference type="STRING" id="3885.V7BKN3"/>
    <dbReference type="Gramene" id="ESW18549">
        <property type="protein sequence ID" value="ESW18549"/>
        <property type="gene ID" value="PHAVU_006G0504000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2258">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DPNIEMA"/>
    <dbReference type="OrthoDB" id="1058301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43620:SF7">
        <property type="entry name" value="GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43620">
        <property type="entry name" value="GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00047512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW18549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="15748" checksum="C7482E4B5FA3E573" modified="2014-02-19" version="1" fragment="single">SAPYLAREQNLSVIDAVSDTLSKAGYDKPGTPNVMIQSSDSSVLLKFKEKTKYELVYSIPEIVSDVVDSALSDIKTFAHSVVVARDSVYPKNALFFVTGSTKTVSKFNSYNLSVYVQTFNNEYVSQAWDFFSDATVQINTFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BKX2</accession>
    <name>V7BKX2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G222600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BKX2"/>
    <dbReference type="SMR" id="V7BKX2"/>
    <dbReference type="STRING" id="3885.V7BKX2"/>
    <dbReference type="Gramene" id="ESW17236">
        <property type="protein sequence ID" value="ESW17236"/>
        <property type="gene ID" value="PHAVU_007G222600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RNX7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EHETSLW"/>
    <dbReference type="OrthoDB" id="1932364at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045277">
        <property type="entry name" value="DRE1A-I"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839:SF85">
        <property type="entry name" value="AP2_ERF DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31839">
        <property type="entry name" value="DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0010">Activator</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="9">
        <location>
            <begin position="46"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="29"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="210" mass="22518" checksum="8D55F6ADD82E956E" modified="2014-02-19" version="1">MASLNCHQLSLATHTFTHHIDNTTTTTAMYSNNATGSSRASSGTGRYRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAAYALKGKDAELNFPDSASSLPVPASLSARDIQMAAAAAAGAAGAAKDAMQTPTGNYNSSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7BL11</accession>
    <name>V7BL11_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein-lysine N-methyltransferase PHAVU_007G264300g</fullName>
            <ecNumber evidence="5">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_007G264300g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">S-adenosyl-L-methionine-dependent protein-lysine N-methyltransferase that methylates elongation factor 1-alpha.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BL11"/>
    <dbReference type="SMR" id="V7BL11"/>
    <dbReference type="STRING" id="3885.V7BL11"/>
    <dbReference type="Gramene" id="ESW17740">
        <property type="protein sequence ID" value="ESW17740"/>
        <property type="gene ID" value="PHAVU_007G264300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3350">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CNFRPEH"/>
    <dbReference type="OrthoDB" id="206354at2759"/>
    <dbReference type="PhylomeDB" id="V7BL11"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016279">
        <property type="term" value="F:protein-lysine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03187">
        <property type="entry name" value="Methyltr_EFM5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019369">
        <property type="entry name" value="Efm5/EEF1AKMT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041370">
        <property type="entry name" value="Mlase_EEF1AKMT1/ZCCHC4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13200">
        <property type="entry name" value="EEF1A LYSINE METHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13200:SF0">
        <property type="entry name" value="EEF1A LYSINE METHYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10237">
        <property type="entry name" value="N6-adenineMlase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW17740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="234" mass="26115" checksum="40EE73E43F112C2A" modified="2014-02-19" version="1">MADQLQLNPNSVTGLTESSAPSDDDEPALSSHTLAALKEFLAEQQHHSDAGEGSEVSLVSENWNLSQFWYSAETAKTVAEEVLTLCGGVHARVACIACPTLYVYLKQMNPNATVQLLEYDKRFQQYGSDYTFYDYNLPDEIPSELKHSCKVVVADPPYLSKECLEKVAETIRLLIQPGESFVLLLTGDVQKERAAEILGLYPCGFRPQHSSKLGNEFRLFSNYDPETRLGGWEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BMI2</accession>
    <name>V7BMI2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G024900g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the mTERF family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BMI2"/>
    <dbReference type="STRING" id="3885.V7BMI2"/>
    <dbReference type="Gramene" id="ESW18243">
        <property type="protein sequence ID" value="ESW18243"/>
        <property type="gene ID" value="PHAVU_006G024900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1267">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTHALIH"/>
    <dbReference type="OrthoDB" id="637682at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.70.10:FF:000001">
        <property type="entry name" value="Mitochondrial transcription termination factor-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.70.10">
        <property type="entry name" value="Transcription termination factor 3, mitochondrial"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003690">
        <property type="entry name" value="MTERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038538">
        <property type="entry name" value="MTERF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068">
        <property type="entry name" value="CGI-12 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13068:SF133">
        <property type="entry name" value="MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02536">
        <property type="entry name" value="mTERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00733">
        <property type="entry name" value="Mterf"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0806">Transcription termination</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW18243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="49475" checksum="60CD0D5A50CC0DFC" modified="2014-02-19" version="1" fragment="single">MHHFLSYRLTSRTPHFGFLCHNAVHFFISRTLSVSNTNHQKSYTFNVYDIINSSGLSSEKALKLTKRLELKKPDGANAVIDLLRNYGFSDTHLHSLVKKIPSVLLSKPEKTLLPKLKFFHSIGFSTTDLPRFLIGNTSFLSSSLDKTIIPRYQIIKRLVHSDKEVVSTLKHDRWHVNRGNFLSSVQNVGTLRQLGVPQHSISFLVTNFPSVTFMNHSRFVEAVEKVKEMRFDPLKVNFVVALQVFAEMSEAMWKSKLEAFERWGWSTDICLLAFRKHPQFLMLSDNKIMKILSFLMKDMGLPVEHIVGCPEILKCNLEKTVIPRCAVVKLLKSRGLIKSDLKISTFIKISDKVFLERYVTRFQKNEPLVLDAYKGIVMEIKLKRTWRPIIKLKKRWRHKWRTPMEVKVHLKGLQEACSKLWELENI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BN95</accession>
    <name>V7BN95_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Carboxypeptidase</fullName>
            <ecNumber evidence="10">3.4.16.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_006G007800g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the peptidase S10 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BN95"/>
    <dbReference type="SMR" id="V7BN95"/>
    <dbReference type="STRING" id="3885.V7BN95"/>
    <dbReference type="MEROPS" id="S10.A41"/>
    <dbReference type="Gramene" id="ESW18036">
        <property type="protein sequence ID" value="ESW18036"/>
        <property type="gene ID" value="PHAVU_006G007800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1282">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SASCIET"/>
    <dbReference type="OrthoDB" id="443318at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004185">
        <property type="term" value="F:serine-type carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11320:FF:000001">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.1820:FF:000030">
        <property type="entry name" value="Carboxypeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001563">
        <property type="entry name" value="Peptidase_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033124">
        <property type="entry name" value="Ser_caboxypep_his_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018202">
        <property type="entry name" value="Ser_caboxypep_ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802:SF272">
        <property type="entry name" value="CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11802">
        <property type="entry name" value="SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00450">
        <property type="entry name" value="Peptidase_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00724">
        <property type="entry name" value="CRBOXYPTASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00560">
        <property type="entry name" value="CARBOXYPEPT_SER_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00131">
        <property type="entry name" value="CARBOXYPEPT_SER_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 10" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005149007" description="Carboxypeptidase" evidence="10">
        <location>
            <begin position="25"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW18036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="489" mass="54437" checksum="0DCEB826311F4012" modified="2014-02-19" version="1">MKNLSLYACLLTLSFLVLLPCSKASQADKLDELILSRSSQKAPMTLSWAEEDALKTHSSAYVAPQEGLQQADKIVALPGQSYGVNFDQYSGYVTVDPEAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNEVANVLFLESPAGVGFSYSNTSSDYDHAGDKSTAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLAYTILLNNKYSHQNINIKSIAIGNAWIDDVTGSKGIVDYLWSHALNSDQTHELIQKYCDFSAENVSEICANATRTALIEKGNIDFYNIYAPLCLDSSLKNGSTGSVSDFDPCSDYYGEAYLNRPEVQLALHAKPTNWTLCSDQLSWNDSPTTILPVIKYLIDSGIGLWIYSGDTDARVPVTSSRYSINSLKLPIQVPWRPWYSEKEVGGYVVKYKGVTFVTVRGAGHLVPSWQPKRALTFVSSFLYGILPPASPWKAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPX7</accession>
    <name>V7BPX7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DOG1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_006G175000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPX7"/>
    <dbReference type="SMR" id="V7BPX7"/>
    <dbReference type="STRING" id="3885.V7BPX7"/>
    <dbReference type="Gramene" id="ESW20029">
        <property type="protein sequence ID" value="ESW20029"/>
        <property type="gene ID" value="PHAVU_006G175000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRBI">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TTHHKAY"/>
    <dbReference type="OrthoDB" id="1895294at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051886">
        <property type="entry name" value="Seed_Dev/Stress_Resp_Reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025422">
        <property type="entry name" value="TGA_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46354">
        <property type="entry name" value="DOG1 DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46354:SF2">
        <property type="entry name" value="PROTEIN DOG1-LIKE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14144">
        <property type="entry name" value="DOG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51806">
        <property type="entry name" value="DOG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755200" description="DOG1 domain-containing protein" evidence="2">
        <location>
            <begin position="25"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="DOG1" evidence="3">
        <location>
            <begin position="67"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="174"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW20029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="305" mass="34947" checksum="6FB17A55939AA601" modified="2014-02-19" version="1">MHPITPPHTVSLRVLFSFLHLVTSPHLPHLINPPSPFHTHTPPHFLTHSTHSLTHFSSLLLMANPVVVRFSEFYENWTGKLEDILQQLLQVSSQRTEVVKTEQELQALVSTVTSHLKEYYTTKWGIAHDNVLIFFSPPWLNPLENAQLWMTGWKPSTVFRQVENLKKGNVLVMTEEQEKKMEELKMKIKMEEEKVEREMERQQVAMADRRMVQLSKLTSRARSAGSEMDSVAEVAVKEVLAGLERVMKASDCVRLKTLKGVLDLLTPMQSVDFLAANITTLLRFNQWGKKKKDMAGTVLNANQEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQN4</accession>
    <name>V7BQN4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">BHLH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G195000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQN4"/>
    <dbReference type="SMR" id="V7BQN4"/>
    <dbReference type="STRING" id="3885.V7BQN4"/>
    <dbReference type="Gramene" id="ESW20274">
        <property type="protein sequence ID" value="ESW20274"/>
        <property type="gene ID" value="PHAVU_006G195000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRNH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="673975at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000978">
        <property type="term" value="F:RNA polymerase II cis-regulatory region sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd11393">
        <property type="entry name" value="bHLH_AtbHLH_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="4.10.280.10:FF:000032">
        <property type="entry name" value="Transcription factor bHLH123 family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.10">
        <property type="entry name" value="Helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045239">
        <property type="entry name" value="bHLH95_bHLH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011598">
        <property type="entry name" value="bHLH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036638">
        <property type="entry name" value="HLH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045843">
        <property type="entry name" value="IND-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223:SF238">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16223">
        <property type="entry name" value="TRANSCRIPTION FACTOR BHLH83-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47459">
        <property type="entry name" value="HLH, helix-loop-helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50888">
        <property type="entry name" value="BHLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="BHLH" evidence="8">
        <location>
            <begin position="331"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="118"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="304"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW20274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="453" mass="49294" checksum="7E340338A8FD95B6" modified="2014-02-19" version="1">MAEEFQAAICGESWWNINPTRSVFPLMSSTCSVAAADAGNYSTWQSTEDINNFISSDNSLSFLDVEKPQQRDSASGTGSILIDSTLQMMGFGMSSSTSSNWNQSLLGSDFHSVLQEETGMGGGSSHDSQIQKDWSPKNFSSAAGQDSTVDAFKSMNQEFSLDQQSLSSVVTSTGSLSDGFPVVSASYGYPSTLIQSLYEPEAQPQPQNSLFTNPTMSYSSSTANYGTCSNELSPTWSKISSLLKPSTPKQQLSGLHFSDTTSFWNGSAEALHDIRAGVFASSQPQYQTPKFEDKSNTPNTLLNKLKREESPDAASSAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYIKNGAPIQHQQDCDNLKESEGRKEDLRSRGLCLVPISSTFPVANESSVDFWTPTFGGAVIGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRX8</accession>
    <name>V7BRX8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">ATP synthase delta chain</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_006G115400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase delta chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRX8"/>
    <dbReference type="SMR" id="V7BRX8"/>
    <dbReference type="STRING" id="3885.V7BRX8"/>
    <dbReference type="Gramene" id="ESW19331">
        <property type="protein sequence ID" value="ESW19331"/>
        <property type="gene ID" value="PHAVU_006G115400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1662">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VSSEVKM"/>
    <dbReference type="OrthoDB" id="1262810at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026015">
        <property type="entry name" value="ATP_synth_OSCP/delta_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11910">
        <property type="entry name" value="ATP SYNTHASE DELTA CHAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47928">
        <property type="entry name" value="N-terminal domain of the delta subunit of the F1F0-ATP synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW19331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="215" mass="23671" checksum="D48E867E7B59403C" modified="2014-02-19" version="1">MDTLSTSVSTLKVSPFPSSPTLTNRDFYPFRATPKRPQQPHHVFSTSTPTFLPKTKSFSHKSSPSLPFSLSHLKPKPSSSICNSNPATGYAAALVEVAQSSNSLHSVHRDVARLLKLLQSVRSPAVEEGNFHRHVAALLKMLLKRNKVGIVKEVLQEFERIYDELCGTQMVLVSSKNKMGEDELLGIAKSVHQLSGAVRVKVRNLIQESVPSFAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7BS66</accession>
    <name>V7BS66_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_006G123200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BS66"/>
    <dbReference type="Gramene" id="ESW19416">
        <property type="protein sequence ID" value="ESW19416"/>
        <property type="gene ID" value="PHAVU_006G123200g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="64"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW19416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="103" mass="10980" checksum="878961E09940BB00" modified="2014-02-19" version="1">MCSSIVGPIIVDNYQRHLTDIVRANGGAYGSSSCTSCSELRTTFYHHTVTHTLSHSDKWHRHFSSSPSSSDSISPNAKLPVSPNDSITAMAPSPTAIKPPAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BTV9</accession>
    <name>V7BTV9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">polynucleotide adenylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G070800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DNA polymerase type-B-like family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.19" evidence="3"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BTV9"/>
    <dbReference type="SMR" id="V7BTV9"/>
    <dbReference type="STRING" id="3885.V7BTV9"/>
    <dbReference type="Gramene" id="ESW21437">
        <property type="protein sequence ID" value="ESW21437"/>
        <property type="gene ID" value="PHAVU_005G070800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1906">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKWPPLR"/>
    <dbReference type="OrthoDB" id="273917at2759"/>
    <dbReference type="PhylomeDB" id="V7BTV9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031499">
        <property type="term" value="C:TRAMP complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990817">
        <property type="term" value="F:poly(A) RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043634">
        <property type="term" value="P:polyadenylation-dependent ncRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031123">
        <property type="term" value="P:RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05402">
        <property type="entry name" value="NT_PAP_TUTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.460.10:FF:000006">
        <property type="entry name" value="non-canonical poly(A) RNA polymerase PAPD5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1410.10:FF:000009">
        <property type="entry name" value="Poly(A) RNA polymerase cid14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="entry name" value="Beta Polymerase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054708">
        <property type="entry name" value="MTPAP-like_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002058">
        <property type="entry name" value="PAP_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045862">
        <property type="entry name" value="Trf4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092:SF15">
        <property type="entry name" value="INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23092">
        <property type="entry name" value="POLY(A) RNA POLYMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22600">
        <property type="entry name" value="MTPAP-like_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03828">
        <property type="entry name" value="PAP_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81631">
        <property type="entry name" value="PAP/OAS1 substrate-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Poly(A) RNA polymerase mitochondrial-like central palm" evidence="9">
        <location>
            <begin position="114"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="PAP-associated" evidence="8">
        <location>
            <begin position="302"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="456"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="470"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="484"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="504"/>
            <end position="515"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF22600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="522" mass="57861" checksum="9DE9B676BD72893D" modified="2014-02-19" version="1">MEEHSLNIPKTFVYDTLCPLALSAADSPFPDHHEPYSVYRNEISVDTPQCALPTSTTVDFFSLDVASEAYGHESLPEPLAATPEPKTPTPAPEPKLESVWFGGNCKFKSPMLQLHKEIVDFCEFLSPTAAEKAVRDMAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISKALSQRSMAKRIQVIGKARVPIIKFVEKISGLAFDISFDIDNGPKAAEYIQEAVLKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAMLRNLRLSQASAEHNLGVLLVHFFDFYGRKLNSSDVGVSCNGTGTFFVKSSKGFLNKGRPSLISIEDPQAPENDIGKNSFNYFQIRSAFSMAFKNLTNPKIIMSLGPNRSILGTIIRPDPVLLERKGGLNGDVTFDKLLPGAGEPLQQQYGEQDMLCNWQLDYEEEPLPRGVDASAEPSSRSSTKKRKSGLKNSSKKLKENENIEMKGNEENDSRKGKDKKNRKKKKTQLGDSGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BV73</accession>
    <name>V7BV73_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G026100g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BV73"/>
    <dbReference type="SMR" id="V7BV73"/>
    <dbReference type="STRING" id="3885.V7BV73"/>
    <dbReference type="Gramene" id="ESW20923">
        <property type="protein sequence ID" value="ESW20923"/>
        <property type="gene ID" value="PHAVU_005G026100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0027">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEQCRAM"/>
    <dbReference type="OrthoDB" id="26525at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000341">
        <property type="entry name" value="Putative calcium-binding protein CML19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039647">
        <property type="entry name" value="EF_hand_pair_protein_CML-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10891">
        <property type="entry name" value="EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00036">
        <property type="entry name" value="EF-hand_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0106">Calcium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="37"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="4">
        <location>
            <begin position="110"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW20923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="141" mass="16065" checksum="E95B2CC6AC7395FF" modified="2014-02-19" version="1">MVNTDFERVLKCFDEDGDGKISPWELRKKLGMMGGELGMKEVELLMEELDCDGDGFLSLEDLVKVMEAAGEEEKLRDLGEAFEMYNDCEMLGFITPKSLQMMLSRLGESKSIHQCTAMIHHFDLNGDGLLNFHEFTLMMNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7BW88</accession>
    <name>V7BW88_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_005G060100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ubiquitin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BW88"/>
    <dbReference type="SMR" id="V7BW88"/>
    <dbReference type="STRING" id="3885.V7BW88"/>
    <dbReference type="Gramene" id="ESW21308">
        <property type="protein sequence ID" value="ESW21308"/>
        <property type="gene ID" value="PHAVU_005G060100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0001">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSDEHTL"/>
    <dbReference type="OrthoDB" id="1886586at2759"/>
    <dbReference type="PhylomeDB" id="V7BW88"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01806">
        <property type="entry name" value="Ubl_NEDD8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01803">
        <property type="entry name" value="Ubl_ubiquitin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000023">
        <property type="entry name" value="NEDD8 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000016">
        <property type="entry name" value="Polyubiquitin 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038738">
        <property type="entry name" value="Nedd8-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019954">
        <property type="entry name" value="Ubiquitin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019956">
        <property type="entry name" value="Ubiquitin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050158">
        <property type="entry name" value="Ubiquitin_ubiquitin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10666">
        <property type="entry name" value="UBIQUITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00348">
        <property type="entry name" value="UBIQUITIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00299">
        <property type="entry name" value="UBIQUITIN_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="9">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="9">
        <location>
            <begin position="77"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW21308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="154" mass="17257" checksum="C30229C1B27587CA" modified="2014-02-19" version="1">MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX26</accession>
    <name>V7BX26_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF3700 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G0834001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX26"/>
    <dbReference type="STRING" id="3885.V7BX26"/>
    <dbReference type="Gramene" id="ESW21595">
        <property type="protein sequence ID" value="ESW21595"/>
        <property type="gene ID" value="PHAVU_005G0834001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT9K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLFMGSL"/>
    <dbReference type="OrthoDB" id="2019121at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="entry name" value="Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024286">
        <property type="entry name" value="DUF3700"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044828">
        <property type="entry name" value="TSJT1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952">
        <property type="entry name" value="ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45952:SF2">
        <property type="entry name" value="OS04G0679400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12481">
        <property type="entry name" value="DUF3700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01172">
        <property type="entry name" value="DUF3700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="N-terminal nucleophile aminohydrolases (Ntn hydrolases)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3700" evidence="1">
        <location>
            <begin position="2"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="191" mass="20913" checksum="FB752E2637323557" modified="2014-02-19" version="1" fragment="single">MLAIFHKAFAHPPEELNSPASYQGSKKPKVPQETLKDFLAHHPHNTCSMSFGHAAVLAYVRPDQPFSLHQRLFCGIDDIYCIFLGSLNNLSLLIKQYGLSKNTDEAMLVIEAYKTLRDRGPYPADQVVKELDGSFAFVVYDSKVGSVFAALGSDGGIKLYWGIAADGSVVISDDLQVIKEGCAKSFAPFPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX97</accession>
    <name>V7BX97_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G088600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX97"/>
    <dbReference type="SMR" id="V7BX97"/>
    <dbReference type="STRING" id="3885.V7BX97"/>
    <dbReference type="Gramene" id="ESW21655">
        <property type="protein sequence ID" value="ESW21655"/>
        <property type="gene ID" value="PHAVU_005G088600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0028">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NDCLPLM"/>
    <dbReference type="OrthoDB" id="343296at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044205">
        <property type="entry name" value="KIC/PBP1/KRP1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN KIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319:SF29">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN KRP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13833">
        <property type="entry name" value="EF-hand_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="62"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW21655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="118" mass="13231" checksum="D89900B1458CFE0B" modified="2014-02-19" version="1">MAAQNSQTHFQDFLPVMANKLGGDGLIDELCNGFNLLKDSEKGVITFDSLKRNSALLGLQGLSDEDLRSMLEEGDFDGDGALNQLEFCVLMFRLSPELMEGSKLWLEQVLQQELRDYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXQ9</accession>
    <name>V7BXQ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">X8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G064400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXQ9"/>
    <dbReference type="SMR" id="V7BXQ9"/>
    <dbReference type="STRING" id="3885.V7BXQ9"/>
    <dbReference type="Gramene" id="ESW21361">
        <property type="protein sequence ID" value="ESW21361"/>
        <property type="gene ID" value="PHAVU_005G064400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S230">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SKGRNHW"/>
    <dbReference type="OrthoDB" id="1928574at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012946">
        <property type="entry name" value="X8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044788">
        <property type="entry name" value="X8_dom_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044">
        <property type="entry name" value="BETA-1,3 GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044:SF57">
        <property type="entry name" value="CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07983">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00768">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="2" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755040" description="X8 domain-containing protein" evidence="4">
        <location>
            <begin position="22"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="X8" evidence="5">
        <location>
            <begin position="29"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW21361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="113" mass="12388" checksum="8A29834A85399E3A" modified="2014-02-19" version="1">MGNVPLLLFLVLFSLSPGGNLVMGNEQKSWCVAKPSSDQATLLSNLNYACSQVDCRILQKGCPCSYPDNLMNHASIAMNLYYQSKGRNHWNCDFRGSGLVSVTDPSYGNCIYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXV7</accession>
    <name>V7BXV7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein LURP-one-related 12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G178100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LOR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXV7"/>
    <dbReference type="SMR" id="V7BXV7"/>
    <dbReference type="Gramene" id="ESW22749">
        <property type="protein sequence ID" value="ESW22749"/>
        <property type="gene ID" value="PHAVU_005G178100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQV0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRWEGYL"/>
    <dbReference type="OrthoDB" id="677463at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.200">
        <property type="entry name" value="LURP1-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007612">
        <property type="entry name" value="LOR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038595">
        <property type="entry name" value="LOR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025659">
        <property type="entry name" value="Tubby-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31087:SF60">
        <property type="entry name" value="PROTEIN LURP-ONE-RELATED 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04525">
        <property type="entry name" value="LOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54518">
        <property type="entry name" value="Tubby C-terminal domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="217" mass="24028" checksum="AF69A7089D084000" modified="2014-02-19" version="1">MASGAAAENMNDVGPGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGELVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRARASLTVEMYDSPGEEYQIEGCFSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGREVFSLCVKAGFDAAFAMGFVLVLDQINGEDYVDSGATTEPAVHPATED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BY07</accession>
    <name>V7BY07_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G182500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="3" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BY07"/>
    <dbReference type="STRING" id="3885.V7BY07"/>
    <dbReference type="Gramene" id="ESW22803">
        <property type="protein sequence ID" value="ESW22803"/>
        <property type="gene ID" value="PHAVU_005G182500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW22804">
        <property type="protein sequence ID" value="ESW22804"/>
        <property type="gene ID" value="PHAVU_005G182500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S5MD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="METQFHG"/>
    <dbReference type="OrthoDB" id="772152at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35462">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35462:SF2">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="112" mass="12231" checksum="B1298EE3A84F443E" modified="2014-02-19" version="1">MEEEEGVSDPWLGTDKLYHLLISFFLTFLFYAFASLTPFRRHAISIGSIFSLLAGAAKEAADHLGYFRSSGASLRDALADILGVFIASLALSLFPFSLRSPPPPHTRALSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7BYF6</accession>
    <name>V7BYF6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_005G124400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the PPR family. PCMP-E subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BYF6"/>
    <dbReference type="Gramene" id="ESW22070">
        <property type="protein sequence ID" value="ESW22070"/>
        <property type="gene ID" value="PHAVU_005G124400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IENAYHV"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016556">
        <property type="term" value="P:mRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000277">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF452">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="4">
        <location>
            <begin position="146"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="4">
        <location>
            <begin position="208"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="4">
        <location>
            <begin position="311"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="4">
        <location>
            <begin position="448"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="5">
        <location>
            <begin position="527"/>
            <end position="619"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00061659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW22070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="619" mass="69680" checksum="1C243247916D3A99" modified="2014-02-19" version="1">MISSCIPVSVGANPTRLLSDERTTLSQVRQVHAYIIKTNLVTHVLSVTKLVKVLSQSSVPYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BZ49</accession>
    <name>V7BZ49_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="23" type="ORF">PHAVU_005G110800g</name>
    </gene>
    <organism evidence="23 24">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="24" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="24">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="19">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BZ49"/>
    <dbReference type="STRING" id="3885.V7BZ49"/>
    <dbReference type="Gramene" id="ESW21921">
        <property type="protein sequence ID" value="ESW21921"/>
        <property type="gene ID" value="PHAVU_005G110800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTV8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1741851at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048544">
        <property type="term" value="P:recognition of pollen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00028">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.90.10.10:FF:000009">
        <property type="entry name" value="Receptor-like serine/threonine-protein kinase SD1-8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.90.10.10">
        <property type="entry name" value="Bulb-type lectin domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001480">
        <property type="entry name" value="Bulb-type_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036426">
        <property type="entry name" value="Bulb-type_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000858">
        <property type="entry name" value="S_locus_glycoprot_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32444">
        <property type="entry name" value="BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32444:SF235">
        <property type="entry name" value="OS01G0783900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01453">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00954">
        <property type="entry name" value="S_locus_glycop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00108">
        <property type="entry name" value="B_lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51110">
        <property type="entry name" value="alpha-D-mannose-specific plant lectins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50927">
        <property type="entry name" value="BULB_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0430">Lectin</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-0675">Receptor</keyword>
    <keyword evidence="24" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8 20" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="20">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755091" description="non-specific serine/threonine protein kinase" evidence="20">
        <location>
            <begin position="28"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="domain" description="Bulb-type lectin" evidence="21">
        <location>
            <begin position="28"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="22">
        <location>
            <begin position="324"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="21">
        <source>
            <dbReference type="PROSITE" id="PS50927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="22">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="23">
        <source>
            <dbReference type="EMBL" id="ESW21921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="24">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="579" mass="64328" checksum="387F808E6FC7FD74" modified="2014-02-19" version="1">MRSEEVVLSFSLLLLSVPLLCFQICLGVDTLKGTQSITDSGKLVSSNATFELGFFSPPGVSGEKRYLGIWYHKLEPQTVVWVANRDDPVADSSGVFRIAEDGNVVVEYASKSLWSSKLEPSSSTNRTLKLLDSGNLVLTDDSETRCLWESFKNPTDTFLLGMKMDATLSLTCWRDPADPAPGSFTFKMGHRETLVVENQSQLYWTESLDGSGTKISGFLGSDTSLLKNSSNLSCLSSKPYNKKERLLMNSSGEIQLLKWDEDDRQWDKKSSEPASMCDVYDHCGSFGICDANNLNFLTCKCLPGFRPRDEEIRGQGCVRKSTSCIDTNVTFLNLTNIKVRDPDEMHGSETEADCESLCRNITITKCPQSQCQAYSYSSRAEFGRDDGNSTCKIWRGNLSTLVVNGIGGRNLSVLFKRSDIEATAKSCDPCGTYEIPYPLSTGPNCGDPTYNKFNCNELTGNLTFTMPGGNSYEVTWIDEDKRVFYIKVDDSYSCGSRNQNKTPKLPFSLAEPECSKIDGMIKMKWAAAPEPPCRKPPDCENRPHSTCMVTSDGGHRCLCDSHYKWNPTVMICAKDYVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7C191</accession>
    <name>V7C191_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_004G086000g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the plant DMP1 protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C191"/>
    <dbReference type="STRING" id="3885.V7C191"/>
    <dbReference type="Gramene" id="ESW23904">
        <property type="protein sequence ID" value="ESW23904"/>
        <property type="gene ID" value="PHAVU_004G086000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS28">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YYPAMPR"/>
    <dbReference type="OrthoDB" id="959867at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010256">
        <property type="term" value="P:endomembrane system organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007770">
        <property type="entry name" value="DMP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31621:SF37">
        <property type="entry name" value="OS01G0882400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31621">
        <property type="entry name" value="PROTEIN DMP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05078">
        <property type="entry name" value="DUF679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="182"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW23904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="219" mass="24910" checksum="553FCFBDB2474EA1" modified="2014-02-19" version="1">MRNSVSEDLIIHCEDEQQENSEEDDYYDLDDYDIDESNYFYVINAILSGTARLNVLLPTITILAFSIFAPLLTDDGKCNTLNRWLMGTFLALLAVSCVFFTLTDSFRSATGRLYYGVATLRGIWTFNGGKKKPRVPSDYRLRLSDLFYASLCLVSFLAFAGLHQDVVKCYYPALPRKLTNTLPLVVGFFVSILFVAFPSQRRGIGYPFLLQRDPFISRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7C379</accession>
    <name>V7C379_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA polymerase beta thumb domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_004G0710001g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="5" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C379"/>
    <dbReference type="STRING" id="3885.V7C379"/>
    <dbReference type="eggNOG" id="KOG2534">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006303">
        <property type="term" value="P:double-strand break repair via nonhomologous end joining"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.210.10:FF:000006">
        <property type="entry name" value="DNA polymerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.210.10">
        <property type="entry name" value="DNA polymerase, thumb domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037160">
        <property type="entry name" value="DNA_Pol_thumb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022312">
        <property type="entry name" value="DNA_pol_X"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029398">
        <property type="entry name" value="PolB_thumb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11276:SF41">
        <property type="entry name" value="DNA POLYMERASE LAMBDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11276">
        <property type="entry name" value="DNA POLYMERASE TYPE-X FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14791">
        <property type="entry name" value="DNA_pol_B_thumb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="Nucleotidyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA polymerase beta thumb" evidence="3">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW23730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="60" mass="6736" checksum="27AF86E624825F17" modified="2014-02-19" version="1" fragment="single">LRLLAESKGFRLDDTGLFPATHGSGSKRGAKGSASLKFNTEKEVFDFLDFPWLEPHERNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3L3</accession>
    <name>V7C3L3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G091100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3L3"/>
    <dbReference type="STRING" id="3885.V7C3L3"/>
    <dbReference type="Gramene" id="ESW23968">
        <property type="protein sequence ID" value="ESW23968"/>
        <property type="gene ID" value="PHAVU_004G091100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQY0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SNENAYP"/>
    <dbReference type="OrthoDB" id="755598at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33675">
        <property type="entry name" value="NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33675:SF10">
        <property type="entry name" value="NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="117" mass="12507" checksum="A2A5D4EFCDEBD4A8" modified="2014-02-19" version="1">MSPRAPLQHHQSQPTMHVPSLGFPVTSASFVQTIAAQGLRAEPGENQPKNSVFSNALSSPIRRSLQHYQISEGGCYSNGPSMGGNGNRNTELGFLPQEGRESVVVSSNDSAMDMHAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7C621</accession>
    <name>V7C621_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">BURP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G052000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
            <location evidence="1">Cell wall</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Extracellular space</location>
            <location evidence="2">Apoplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C621"/>
    <dbReference type="STRING" id="3885.V7C621"/>
    <dbReference type="Gramene" id="ESW25627">
        <property type="protein sequence ID" value="ESW25627"/>
        <property type="gene ID" value="PHAVU_003G052000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT2V">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NAGRANF"/>
    <dbReference type="OrthoDB" id="773062at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004873">
        <property type="entry name" value="BURP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051897">
        <property type="entry name" value="PG-associated_BURP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31458">
        <property type="entry name" value="POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31458:SF2">
        <property type="entry name" value="POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03181">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01045">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51277">
        <property type="entry name" value="BURP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="3" id="KW-0134">Cell wall</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="5 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755008" description="BURP domain-containing protein" evidence="8">
        <location>
            <begin position="25"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="domain" description="BURP" evidence="9">
        <location>
            <begin position="409"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="210"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="210"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW25627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="624" mass="68108" checksum="5FE34CC35B6A5460" modified="2014-02-19" version="1">MHNNMINTLFLLLLLLSLLTVAFGGRNIQDKNPFTPKASVARYWDNHVRNTLPKPSFLLSKASPMTAADTATFAKLAAANTLSTRLPEFCSAAHLLCFPEVRPSLEKHTQDENFQTYNDGQNFTNYGTARGGGIDTFKNYSNDLLSIPVNDFRRYSRGAAGHEETFTGYASGTNVADQSFHTYGTNSAGGSGEFKNYSSDSNVPDLRFSTYSDSTAGRTQSFSRYSEDGNSGGQTFQSYGKNSAGAENEFTGYGTNSNVASSGFTNYGSKGTGPNDTFANYGVDMNVPEITFKSYADGTHGGTETFANYRDQSNVGDDTFQSYAKNTKEGTQVDFKNYGNSANPGTDTFKGYAKGAEGDHKVGFTGYGVNTNATFKDYAKEGVSFASYNTSSSNLGGSLVKRWVEPGKFFRESMLKEGSVMGMPDIRDKMPQRSFLPRSILMKLPFSSSKIEELKSVFKVSDNSSMEKMMTDSLGECERAPSVGEIKRCVGSVEDMIDFATSVLGHNVGVWTTQNVNGFSKNVMVGRVKGMNGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHGAFVALGSSPGRIEVCHWIFENDMTWTVAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6Z1</accession>
    <name>V7C6Z1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">PPPDE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G010100g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DeSI family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6Z1"/>
    <dbReference type="STRING" id="3885.V7C6Z1"/>
    <dbReference type="Gramene" id="ESW25133">
        <property type="protein sequence ID" value="ESW25133"/>
        <property type="gene ID" value="PHAVU_003G010100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0324">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FQADNEK"/>
    <dbReference type="OrthoDB" id="412286at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101005">
        <property type="term" value="F:deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1720.30">
        <property type="entry name" value="PPPDE domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008580">
        <property type="entry name" value="PPPDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042266">
        <property type="entry name" value="PPPDE_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378">
        <property type="entry name" value="DESUMOYLATING ISOPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12378:SF83">
        <property type="entry name" value="PPPDE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05903">
        <property type="entry name" value="Peptidase_C97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01179">
        <property type="entry name" value="DUF862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51858">
        <property type="entry name" value="PPPDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="PPPDE" evidence="5">
        <location>
            <begin position="1"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW25133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="184" mass="21020" checksum="297A1431E41E9F37" modified="2014-02-19" version="1">MNENEEKVLPSFVFTNFLNGVIVLAVYGVEYAFGAHDYSTSGVFEVEPRQCPGFKFRKSIFMGTTSLDPFQIREFMERQSANYMLTGNSNPKWVNRLARIGPFCNCILPDALKTSTVQYDPNFQACDSEKRRLITAFSCLSSISMPQKEVSMSSLFMHSHYKGCLPPWELKKSKKGRLKQKLDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C896</accession>
    <name>V7C896_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GPN-loop GTPase</fullName>
            <ecNumber evidence="5">3.6.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G116600g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Binds to RNA polymerase II.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the GPN-loop GTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C896"/>
    <dbReference type="SMR" id="V7C896"/>
    <dbReference type="STRING" id="3885.V7C896"/>
    <dbReference type="Gramene" id="ESW26397">
        <property type="protein sequence ID" value="ESW26397"/>
        <property type="gene ID" value="PHAVU_003G116600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1532">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MIIVFNK"/>
    <dbReference type="OrthoDB" id="243313at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17870">
        <property type="entry name" value="GPN1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000817">
        <property type="entry name" value="GPN-loop GTPase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004130">
        <property type="entry name" value="Gpn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030230">
        <property type="entry name" value="Gpn1/Npa3/XAB1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231:SF8">
        <property type="entry name" value="GPN-LOOP GTPASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21231">
        <property type="entry name" value="XPA-BINDING PROTEIN 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03029">
        <property type="entry name" value="ATP_bind_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="329"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="329"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="364"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="375"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU365059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="46645" checksum="92A72FA879EF481A" modified="2014-02-19" version="1">MHPSNKGSSSNACLHDMGPPMLPISGEMALPTNAVEDKEKEKEELTETMNKLNIEGPSSGNGLPNFRRKPVIIIVVGMAGSGKTTLMHRLVCHTHMRNIRGYVMNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTKLPLILTFNKVDVAAHQFALEWMEDFETFQAAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFKTVEASAEEYMETYKADLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKEKSKSMMDEEDEVEEMDDDDDDLERYTEDDDAIDEDEDEDEEVDKFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7C909</accession>
    <name>V7C909_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G136800g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the oligosaccharyltransferase (OST) complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the OST5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C909"/>
    <dbReference type="SMR" id="V7C909"/>
    <dbReference type="STRING" id="3885.V7C909"/>
    <dbReference type="Gramene" id="ESW26652">
        <property type="protein sequence ID" value="ESW26652"/>
        <property type="gene ID" value="PHAVU_003G136800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4452">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MERYVGP"/>
    <dbReference type="OrthoDB" id="18408at2759"/>
    <dbReference type="PhylomeDB" id="V7C909"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008250">
        <property type="term" value="C:oligosaccharyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006487">
        <property type="term" value="P:protein N-linked glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007915">
        <property type="entry name" value="TMEM258/Ost5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13636">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 258"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05251">
        <property type="entry name" value="Ost5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW26652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="76" mass="8102" checksum="035B4F6D0A0F5A19" modified="2014-02-19" version="1">MAPKPITSPVPDAWYPTLSVFTLAIGLVLTASFFIYEATSSRKTRSLVQELTTGAVASIFLGFGSLFLLIASGVYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9E6</accession>
    <name>V7C9E6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">leucine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Leucyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G081300g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="16" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>tRNA(Leu) + L-leucine + ATP = L-leucyl-tRNA(Leu) + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:11688"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9E6"/>
    <dbReference type="SMR" id="V7C9E6"/>
    <dbReference type="STRING" id="3885.V7C9E6"/>
    <dbReference type="Gramene" id="ESW25978">
        <property type="protein sequence ID" value="ESW25978"/>
        <property type="gene ID" value="PHAVU_003G081300g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25979">
        <property type="protein sequence ID" value="ESW25979"/>
        <property type="gene ID" value="PHAVU_003G081300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0435">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GIEHACM"/>
    <dbReference type="OrthoDB" id="15954at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA deacylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004823">
        <property type="term" value="F:leucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006429">
        <property type="term" value="P:leucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009791">
        <property type="term" value="P:post-embryonic development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048608">
        <property type="term" value="P:reproductive structure development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd07958">
        <property type="entry name" value="Anticodon_Ia_Leu_BEm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00812">
        <property type="entry name" value="LeuRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.730.10:FF:000012">
        <property type="entry name" value="Leucine--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000056">
        <property type="entry name" value="Leucine--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.620:FF:000077">
        <property type="entry name" value="Leucine--tRNA ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.730.10:FF:000011">
        <property type="entry name" value="Leucine--tRNA ligase chloroplastic/mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.740.10:FF:000049">
        <property type="entry name" value="Os01g0120300 protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="entry name" value="HUPs"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.730.10">
        <property type="entry name" value="Isoleucyl-tRNA Synthetase, Domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00049_B">
        <property type="entry name" value="Leu_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002302">
        <property type="entry name" value="Leu-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025709">
        <property type="entry name" value="Leu_tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015413">
        <property type="entry name" value="Methionyl/Leucyl_tRNA_Synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00396">
        <property type="entry name" value="leuS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43740:SF2">
        <property type="entry name" value="LEUCINE--TRNA LIGASE, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43740">
        <property type="entry name" value="LEUCYL-TRNA SYNTHETASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13603">
        <property type="entry name" value="tRNA-synt_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09334">
        <property type="entry name" value="tRNA-synt_1g"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00985">
        <property type="entry name" value="TRNASYNTHLEU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52374">
        <property type="entry name" value="Nucleotidylyl transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="ValRS/IleRS/LeuRS editing domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methionyl/Leucyl tRNA synthetase" evidence="13">
        <location>
            <begin position="117"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="Leucyl-tRNA synthetase editing" evidence="14">
        <location>
            <begin position="298"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="domain" description="Aminoacyl-tRNA synthetase class Ia" evidence="11">
        <location>
            <begin position="721"/>
            <end position="752"/>
        </location>
    </feature>
    <feature type="domain" description="Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding" evidence="12">
        <location>
            <begin position="808"/>
            <end position="915"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF09334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF13603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW25978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="967" mass="109354" checksum="9C9ED3E957D5D132" modified="2014-02-19" version="1">MLHTHHLHAHLLFLSPHSHTASFPFPSRTTTSHSPRFHVTSIRRGSSSLSFRNRGRGSILNSVANGGTEHQKQPVNRAYPFHEIEPKWQRFWEHNRTFRTPDDDIDTTKPKYYVLDMFPYPSGAGLHVGHPLGYTATDILARYKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKLTTVRNINRFRTQLKSLGFSYDWDREISTIEPDYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDGKERDEKIIVYTTRPETIFGATYLVVAPEHSLLPSLVSIAQSKHVEDYVDLATRKSDLERTELQKEKTGVFTGCYAKNPANGEAIPIWVADYVLGGYGTGAIMAVPAHDSRDYDFALKYDAPISWVIMPDGKSVDFGKAFIGEGIIVNSSNTLVGLDINGLSSKEAALTVIEWAEKSGKGKRKVNYKLRDWLFARQRYWGEPIPVIFIDDSGETVPLCETELPLILPELDDFSPTGTGEPPLSKAVSWGKTADSLSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVGKTKERYWGPVDVYVGGAEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEVQYMACRDQDGNLISADSTDLLNEHKLEIIPAEKAMKSGDSFVLKENPNIRLHARTHKMSKSRGNVVNPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTSGIEGVHRFLGRTWRLIVGSPLSDGTFKDRTVSVDEEPTIEQLRCLHKCIAKVTEEIEGTRFNTGISAMMEFLNAAYKWDKHPRSVIEAFVLLLSPYAPHMAEELWSRLGHTKSLACVPFPKANPTYLKDSTVVLPVQINGKTRGTIEVEETCTEEEAFVLASRDEKLSKYLHGQSVKKRIYVPGKILNVVLDRKNIQVGVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9Q3</accession>
    <name>V7C9Q3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Cyclic nucleotide-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_003G155800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Cyclic nucleotide-gated channel involved in the establishment of both rhizobial and mycorrhizal associations. Required for full activation of nuclear-localized Ca(2+) oscillations by Nod and Myc factors. Simultaneous activation of the K(+)-permeable channel DMI1 and the Ca(2+) channel CNGC15 can give rise to sustained Ca(2+) oscillations. May function during fertilization in both female and male gametophytic Ca(2+) signaling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Interacts (via N-terminus) with DMI1 (via c-terminus). The Nod factor has no effect on this interaction, implying that the complex is maintained after activation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9Q3"/>
    <dbReference type="STRING" id="3885.V7C9Q3"/>
    <dbReference type="Gramene" id="ESW26874">
        <property type="protein sequence ID" value="ESW26874"/>
        <property type="gene ID" value="PHAVU_003G155800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0498">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CLFTEHT"/>
    <dbReference type="OrthoDB" id="421226at2759"/>
    <dbReference type="PhylomeDB" id="V7C9Q3"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031965">
        <property type="term" value="C:nuclear membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044325">
        <property type="term" value="F:transmembrane transporter binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005249">
        <property type="term" value="F:voltage-gated potassium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.287.630:FF:000003">
        <property type="entry name" value="Cyclic nucleotide-gated ion channel 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.10:FF:000024">
        <property type="entry name" value="Cyclic nucleotide-gated ion channel 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.630">
        <property type="entry name" value="Helix hairpin bin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="entry name" value="Jelly Rolls"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003938">
        <property type="entry name" value="K_chnl_volt-dep_EAG/ELK/ERG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45651">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45651:SF112">
        <property type="entry name" value="CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01463">
        <property type="entry name" value="EAGCHANLFMLY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="cAMP-binding domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81324">
        <property type="entry name" value="Voltage-gated potassium channels"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9" id="KW-1071">Ligand-gated ion channel</keyword>
    <keyword evidence="7 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="202"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="235"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="274"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="404"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="14">
        <location>
            <begin position="508"/>
            <end position="592"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00056117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00064416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW26874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="736" mass="84074" checksum="2E60D64A716A66F7" modified="2014-02-19" version="1">MMFDCGHKSEYMGGQRENFLRLEALDSTLSSSSDAGVIKSGFSIDKLGHGGHGSSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINSSFHCLGIDRKLAIIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLQRYFIIDFLSVLPIPQIVVWRFLLRSKGSDVLTTKQALLFIILFQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSDIDNLCNKNFLYCGNQHMEGYSAWHNRSEDILKSTCSADGDPPPFDYGIFKQVLSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEHTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALMEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMKLRQKEEDADESEGSHENAGGSSYSFGAALLASKFAAHTLRGVHRNRLAKTARELVKLQKPPEPDFSADDAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7CAF7</accession>
    <name>V7CAF7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Translation initiation factor eIF2B subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">eIF2B GDP-GTP exchange factor subunit delta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G177900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CAF7"/>
    <dbReference type="SMR" id="V7CAF7"/>
    <dbReference type="STRING" id="3885.V7CAF7"/>
    <dbReference type="Gramene" id="ESW27147">
        <property type="protein sequence ID" value="ESW27147"/>
        <property type="gene ID" value="PHAVU_003G177900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1467">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HAYKAIS"/>
    <dbReference type="OrthoDB" id="10254737at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="entry name" value="Translation initiation factor eif-2b, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233:SF21">
        <property type="entry name" value="NAGB_RPIA_COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10233">
        <property type="entry name" value="TRANSLATION INITIATION FACTOR EIF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="NagB/RpiA/CoA transferase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="26"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="70"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="88"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="5">
        <location>
            <begin position="102"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="130"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="149"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00044147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00044356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW27147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="550" mass="61282" checksum="7C8BC2F0505AB6F4" modified="2014-02-19" version="1">MDATRVSHSLGDPKIRRVGFFVPESSTTDSCKILSPRHLSGTLPDMQTSVDGQVSSQSNDASENLNLETGIEKREEGEKKVLKSRSKPLKEKTTKAERRALQEAQRAAKAAASKDEGSKAVAETGGAATGRSTKQSSQKKVGPSFPLAADKKAGDRPLDKDRKKDAPPPRMQFDDESRMEKARRRAVVNPTESRTRVELFKHLPQYEHGTKLSNLESKFFHLGLVHPSVFEVGQRYSAGDIWGGNARCVAMLRALQDAIRDYCTDHEKALVRDLTSKINSYVSFFTECRPLSMSMGNAIRFVKSRIVNLSTNHSEFEAKRTLCSDIDQFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKHFRVVVVDSQPRLEGQVLLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFNERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVTVIVTDYGMLPPSSVPVIVREYRREHLLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7CBN5</accession>
    <name>V7CBN5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G107600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CBN5"/>
    <dbReference type="Gramene" id="ESW26301">
        <property type="protein sequence ID" value="ESW26301"/>
        <property type="gene ID" value="PHAVU_003G107600g"/>
    </dbReference>
    <dbReference type="OMA" id="PQILCQY"/>
    <dbReference type="OrthoDB" id="1359952at2759"/>
    <dbReference type="PhylomeDB" id="V7CBN5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW26301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="72" mass="8315" checksum="1F292CDD238D414B" modified="2014-02-19" version="1">MKPQEDLATIGQQKSFWNLSSEPQLLCQYKFYPTYLTAKAIQMKVEDIKCNEAASRFTVENRTELQQRGLVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7CC56</accession>
    <name>V7CC56_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ubiquitin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_003G123400g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ubiquitin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CC56"/>
    <dbReference type="STRING" id="3885.V7CC56"/>
    <dbReference type="Gramene" id="ESW26486">
        <property type="protein sequence ID" value="ESW26486"/>
        <property type="gene ID" value="PHAVU_003G123400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0001">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CREVAFE"/>
    <dbReference type="OrthoDB" id="1340217at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd01803">
        <property type="entry name" value="Ubl_ubiquitin"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000016">
        <property type="entry name" value="Polyubiquitin 3"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000160">
        <property type="entry name" value="Polyubiquitin-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000626">
        <property type="entry name" value="Ubiquitin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029071">
        <property type="entry name" value="Ubiquitin-like_domsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019954">
        <property type="entry name" value="Ubiquitin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019956">
        <property type="entry name" value="Ubiquitin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050158">
        <property type="entry name" value="Ubiquitin_ubiquitin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10666">
        <property type="entry name" value="UBIQUITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00240">
        <property type="entry name" value="ubiquitin"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00348">
        <property type="entry name" value="UBIQUITIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00213">
        <property type="entry name" value="UBQ"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54236">
        <property type="entry name" value="Ubiquitin-like"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00299">
        <property type="entry name" value="UBIQUITIN_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50053">
        <property type="entry name" value="UBIQUITIN_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiquitin-like" evidence="7">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="7">
        <location>
            <begin position="77"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="7">
        <location>
            <begin position="153"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="7">
        <location>
            <begin position="234"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="Ubiquitin-like" evidence="7">
        <location>
            <begin position="282"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW26486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="358" mass="40194" checksum="DD3424544A4C1E3D" modified="2014-02-19" version="1">MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQMESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD81</accession>
    <name>V7CD81_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">glycerophosphodiester phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.46</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_003G184300g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a sn-glycero-3-phosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:12969"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:83408"/>
            <dbReference type="EC" id="3.1.4.46"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycerophosphoryl diester phosphodiesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.46" evidence="2"/>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD81"/>
    <dbReference type="SMR" id="V7CD81"/>
    <dbReference type="STRING" id="3885.V7CD81"/>
    <dbReference type="Gramene" id="ESW27225">
        <property type="protein sequence ID" value="ESW27225"/>
        <property type="gene ID" value="PHAVU_003G184300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2258">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRHENDI"/>
    <dbReference type="OrthoDB" id="1058301at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08602">
        <property type="entry name" value="GDPD_ScGlpQ1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.190:FF:000023">
        <property type="entry name" value="Glycerophosphodiester phosphodiesterase GDPD5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="entry name" value="Phosphatidylinositol (PI) phosphodiesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43620:SF7">
        <property type="entry name" value="GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43620">
        <property type="entry name" value="GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="PLC-like phosphodiesterases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="6" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757665" description="glycerophosphodiester phosphodiesterase" evidence="8">
        <location>
            <begin position="22"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="GP-PDE" evidence="9">
        <location>
            <begin position="44"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW27225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="395" mass="45596" checksum="BF3EF4BEC5EB1566" modified="2014-02-19" version="1">MASLSSFAPLVFLLLVIGCTARPFYPLPSKGDGGSRKPLQTLRPYNIAHRGSNGEIPEATHPAYTRAIEEGADFIETDILSSKDGVLICFHDATLDNTTDIANYAEFANRKRTYEVQGENITGFFTVDFTLKELKSLRVRQRYTYRDQQFNGKFQIITFEEFITIALQAPRVVGIYPEIKYPVYINQHVKWSDGKIFEDKFVDTLQKYGFKGSYLSKNWLRQPIFIQSFAPTSLVYIANKTDLPKILLIDDIDIPTQDTNQSYWEITSDEYLNYIKQYVVGIGPWKDTLVPVAKNYMRTPTDLVSRAHAHNLQVHPYTYRNENSFLHFNFSQDPYMEYDYWINKIGIDGLFTDFTGSLHHFQEWTSKHQDDDSDNDDNTASKLLHKIAMLLASYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="22" xmlns="https://uniprot.org/uniprot">
    <accession>V7CFA2</accession>
    <name>V7CFA2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_003G247100g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW27955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CFA2"/>
    <dbReference type="Gramene" id="ESW27955">
        <property type="protein sequence ID" value="ESW27955"/>
        <property type="gene ID" value="PHAVU_003G247100g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="10617597at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW27955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="144" mass="16412" checksum="5C8D7308E0474235" modified="2014-02-19" version="1">MVHCIPVLASKESQGQRLLYLRHNQQKNLRSITWICVTHILKSPMFYNLTFEIQISQQELLSARGSGVPFLFQSDEDAGFGSDALVEKFKFQMSDYKISMTSRLLFPDVAPDAYHPSTVTTTLNTSDVLFFFVFLFCCGVDVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7CGB7</accession>
    <name>V7CGB7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_002G053000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CGB7"/>
    <dbReference type="SMR" id="V7CGB7"/>
    <dbReference type="STRING" id="3885.V7CGB7"/>
    <dbReference type="Gramene" id="ESW29217">
        <property type="protein sequence ID" value="ESW29217"/>
        <property type="gene ID" value="PHAVU_002G053000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ9E">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GNLQEWY"/>
    <dbReference type="OrthoDB" id="2848340at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004560">
        <property type="term" value="F:alpha-L-fucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.10:FF:000028">
        <property type="entry name" value="Alpha-L-fucosidase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049053">
        <property type="entry name" value="AFCA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016518">
        <property type="entry name" value="Alpha-L-fucosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054363">
        <property type="entry name" value="GH95_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027414">
        <property type="entry name" value="GH95_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31084">
        <property type="entry name" value="ALPHA-L-FUCOSIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31084:SF0">
        <property type="entry name" value="ALPHA-L-FUCOSIDASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14498">
        <property type="entry name" value="Glyco_hyd_65N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21307">
        <property type="entry name" value="Glyco_hydro_95_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22124">
        <property type="entry name" value="Glyco_hydro_95_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007663">
        <property type="entry name" value="UCP007663"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="Six-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycosyl hydrolase family 95 N-terminal" evidence="1">
        <location>
            <begin position="15"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyl hydrolase family 95 catalytic" evidence="3">
        <location>
            <begin position="286"/>
            <end position="724"/>
        </location>
    </feature>
    <feature type="domain" description="Alpha fucosidase A-like C-terminal" evidence="2">
        <location>
            <begin position="727"/>
            <end position="787"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF21307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF22124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW29217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="825" mass="91897" checksum="9AF9D9C0D4D57724" modified="2014-02-19" version="1">MEASDLKIRFGEEGGKHWTDALPIGNGRLGAMICGHLHSETIHLNEDTLWTGTPADYTNSKAPQALSRVRNLVNRQQYPQATAAASALTGSNPSEAYQLLGDIKLDFDYSHLTGGQQSYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARLSFTLSLQSKMINQTYLNGTNQIIMKGSCPGKRVSPQLQHSPQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEASDWAVLLLVASSSFSDPFTPPSDSKKDPTSACFSTLSSISNVSYSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEGNEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRLRPLYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITLEQTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMFVQSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEFGIWSEEQTRTTLTKRIHYKGTMVTTDLITGIFYKFNGQLKCLNSCSLSEMACS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHJ0</accession>
    <name>V7CHJ0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">mitogen-activated protein kinase kinase kinase</fullName>
            <ecNumber evidence="2">2.7.11.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G021100g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.25"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.25" evidence="2"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHJ0"/>
    <dbReference type="STRING" id="3885.V7CHJ0"/>
    <dbReference type="Gramene" id="ESW28822">
        <property type="protein sequence ID" value="ESW28822"/>
        <property type="gene ID" value="PHAVU_002G021100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW28823">
        <property type="protein sequence ID" value="ESW28823"/>
        <property type="gene ID" value="PHAVU_002G021100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0198">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="266718at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004709">
        <property type="term" value="F:MAP kinase kinase kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050538">
        <property type="entry name" value="MAP_kinase_kinase_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016">
        <property type="entry name" value="MAP KINASE KINASE KINASE SSK2-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48016:SF5">
        <property type="entry name" value="MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="342"/>
            <end position="617"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="10"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="86"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="147"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="253"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="10"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="86"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="147"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="269"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="371"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW28823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="617" mass="67362" checksum="A83EF1A3E745A0CA" modified="2014-02-19" version="1">MRWFPTIIFSHSNSSSSPSPSPSSSSTPTSSLATLKSSASTSSSVSHTGRNTRSAWFFGGTRRSTRSRKLSHVADIDAVVITPLSRSTSTFDRSSTPSAEPQPLPLPRAIDSRLPSPKDAADKPNAVVDFTLPAGFQMRSVFARQENRNNTEHVETRSPGVVPQQDTSGCASTRAQGNNFWLSVPARSAPTSPFASPRIIPNTTKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDTILSPHQSPPGKSPTQHPKSPNAHSSFSSPSIPPKLSLDISMARREITPPQFVHPLPLPPWAGPVAPLLSPSATFSPPVAKTESLPMKNQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEVFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVAELSLKGSPYWMAPELMQAVVQKGNSTEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEDVSCSTHLYNGTPFMDIHSLRELSDNRFHHISISSAHIAEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJ55</accession>
    <name>V7CJ55_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_002G133300g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJ55"/>
    <dbReference type="SMR" id="V7CJ55"/>
    <dbReference type="STRING" id="3885.V7CJ55"/>
    <dbReference type="Gramene" id="ESW30202">
        <property type="protein sequence ID" value="ESW30202"/>
        <property type="gene ID" value="PHAVU_002G133300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0331">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KKTHDMY"/>
    <dbReference type="OrthoDB" id="196131at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00268">
        <property type="entry name" value="DEADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd18787">
        <property type="entry name" value="SF2_C_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000008">
        <property type="entry name" value="ATP-dependent RNA helicase RhlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044742">
        <property type="entry name" value="DEAD/DEAH_RhlB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47958">
        <property type="entry name" value="ATP-DEPENDENT RNA HELICASE DBP3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 14" id="KW-0347">Helicase</keyword>
    <keyword evidence="7 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <feature type="domain" description="DEAD-box RNA helicase Q" evidence="18">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="16">
        <location>
            <begin position="147"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="17">
        <location>
            <begin position="353"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="13">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="15">
        <location>
            <begin position="38"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00037449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW30202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="537" mass="59188" checksum="7561A36266CB2A83" modified="2014-02-19" version="1">MGRRNDAVLVSEPVAEEVPYSPELDSEKKKKKKKNKNKDKQHESENSPKRKLDELDHQNGTESKKKKKKKHHDSKENAEETNGDGNNDNGANRDETVADRSVVVTGKNAGDAKYAALKNFLDSGLPENVLECCKGFEKPSPIQSRAWPFLLDRRDLIGIAATGSGKTLAFGIPAIMHVLGKRKGKGSRGRNPLCLVLSPTRELAQQISDVMCDAGSSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGVCCLKEVSFVVLDEADRMLDMGFEQIVRSILGQTSSDRQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRARDRRLVALLEKYHKSQSNRVLVFVLYKNEAKRVENMLQEGGWKAVSIHGDKAQHDRTKALSLFKKGTCPLLVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKKTFDNSDDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJH9</accession>
    <name>V7CJH9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">4-coumarate--CoA ligase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G040100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJH9"/>
    <dbReference type="SMR" id="V7CJH9"/>
    <dbReference type="STRING" id="3885.V7CJH9"/>
    <dbReference type="Gramene" id="ESW29061">
        <property type="protein sequence ID" value="ESW29061"/>
        <property type="gene ID" value="PHAVU_002G040100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1176">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNSSFWY"/>
    <dbReference type="OrthoDB" id="10253869at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016207">
        <property type="term" value="F:4-coumarate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106290">
        <property type="term" value="F:trans-cinnamate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009698">
        <property type="term" value="P:phenylpropanoid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="CDD" id="cd05904">
        <property type="entry name" value="4CL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.300.30:FF:000007">
        <property type="entry name" value="4-coumarate--CoA ligase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.12780:FF:000003">
        <property type="entry name" value="Long-chain-fatty-acid--CoA ligase FadD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="entry name" value="N-terminal domain of ligase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_synth/lig_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096:SF169">
        <property type="entry name" value="4-COUMARATE--COA LIGASE 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24096">
        <property type="entry name" value="LONG-CHAIN-FATTY-ACID--COA LIGASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56801">
        <property type="entry name" value="Acetyl-CoA synthetase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-dependent synthetase/ligase" evidence="5">
        <location>
            <begin position="47"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding enzyme C-terminal" evidence="6">
        <location>
            <begin position="469"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="566" mass="61182" checksum="AD0A55AA16121432" modified="2014-02-19" version="1">MLSVAPSLDTNTKTDQTQIPQTTHVFKSKLPDIPISNHLSLHDYCFQNLSQFADRPCLIVGSASKTYTYAQTYLISRKIAAGFSNLGIRKGDVVMILLQNSAEFVLSFLAASMVGAVATTANPFYTAAEIFKQFTASKAKLIITQAMYVEKLRSHDAGWSLGEDFKVVTVDDPPENCLHFSVLSEANESDAPEVEIHPDDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMQKFEIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVANFDLSSIRLVLSGAAPLGKELEEALHSRVPHAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGLQIMKGYLNDDQATASTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVVAGELPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEAAAAAAATPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLG2</accession>
    <name>V7CLG2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G129100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Endomembrane system</location>
            <topology evidence="9">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Membrane</location>
            <topology evidence="10">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the methyltransferase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLG2"/>
    <dbReference type="STRING" id="3885.V7CLG2"/>
    <dbReference type="Gramene" id="ESW30153">
        <property type="protein sequence ID" value="ESW30153"/>
        <property type="gene ID" value="PHAVU_002G129100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW30154">
        <property type="protein sequence ID" value="ESW30154"/>
        <property type="gene ID" value="PHAVU_002G129100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQA9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MAKGTRW"/>
    <dbReference type="OrthoDB" id="2013972at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.150:FF:000076">
        <property type="entry name" value="probable methyltransferase PMT21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004159">
        <property type="entry name" value="Put_SAM_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108:SF984">
        <property type="entry name" value="METHYLTRANSFERASE PMT21-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10108">
        <property type="entry name" value="SAM-DEPENDENT METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03141">
        <property type="entry name" value="Methyltransf_29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="3 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00060399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW30153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="601" mass="68675" checksum="164AD6232DDAD666" modified="2014-02-19" version="1">MKHKDGKPINQPNKSRAVTFAVTLIALCGLSFYLGGIFCSGKDAVVANTIKNTLDTPKQTSGSLVMRPISFPECSLDYQDYTPCTDPKRWRKYGTFRLTLLERHCPPIFERKECLVPPPDGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLIKEGEKFLFPGGGTMFPNGVGEYVDMMQELIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLMEIHRILRPGGFWVLSGPPVNYEHRWRGWNTTVAEQKTDYENLQNLLTSMCFTLYNKKDDIAVWQKAKDNSCYEKLPKETYPPKCDDSLEPDSGWYTPLRACFVLPDPKYTKSVLTYMPKWPERLHASPERITTAHGASTSGSISTFHHDDGKWKKRIQHYKKLLPELGTEKIRNVMDMNTVYGAFAAALINDPLWVMNVVSSYGPNTLPVVYDRGLIGTFHDWCEAFSTYPRTYDLLHLDGFFTAENHRCEMKYVLLEMDRILRPGGHAIIRESSYFVDAVATVGKGMRWICRKEKTEYGVDKEKVLICQKKLWHSSNTGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLG7</accession>
    <name>V7CLG7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G093400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLG7"/>
    <dbReference type="SMR" id="V7CLG7"/>
    <dbReference type="STRING" id="3885.V7CLG7"/>
    <dbReference type="Gramene" id="ESW29721">
        <property type="protein sequence ID" value="ESW29721"/>
        <property type="gene ID" value="PHAVU_002G093400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="METKSCK"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW29721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="78" mass="8836" checksum="385056E5DEC58B47" modified="2014-02-19" version="1">MGSCEYQRLHIFFFPFLAHGHMIPTVDMPKSFAEKGVKATIITTPLNAPFIFKAIEKSKTNGNDIHIQTILINSLKIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLQ5</accession>
    <name>V7CLQ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">X8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G102400g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
            <topology evidence="1">GPI-anchor</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLQ5"/>
    <dbReference type="SMR" id="V7CLQ5"/>
    <dbReference type="STRING" id="3885.V7CLQ5"/>
    <dbReference type="Gramene" id="ESW29831">
        <property type="protein sequence ID" value="ESW29831"/>
        <property type="gene ID" value="PHAVU_002G102400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S0BH">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HRNSTIF"/>
    <dbReference type="OrthoDB" id="1930814at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098552">
        <property type="term" value="C:side of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.58.1040:FF:000001">
        <property type="entry name" value="Glucan endo-1,3-beta-glucosidase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012946">
        <property type="entry name" value="X8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044788">
        <property type="entry name" value="X8_dom_prot"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044">
        <property type="entry name" value="BETA-1,3 GLUCANASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31044:SF60">
        <property type="entry name" value="PLASMODESMATA CALLOSE-BINDING PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07983">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00768">
        <property type="entry name" value="X8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0336">GPI-anchor</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755864" description="X8 domain-containing protein" evidence="10">
        <location>
            <begin position="20"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="X8" evidence="11">
        <location>
            <begin position="20"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="102"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW29831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="182" mass="18455" checksum="27D6798D4AA0570A" modified="2014-02-19" version="1">MALFLYLVLFLALTRHSSALYCLCKDGVGDQALQKAIDYACGAGADCTPILQNGACYNPNTVKDHCNYAVNSYYQRKGNAQGTCDFAGTAATSSNPPAASSGCVYPSSPSNAGTTPSTGSPPGTTPSAGTPPGTSLTPGSPNTFGISPTSTTGSSGNGAILGATNSELLLLFVLTMWLAIRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLV9</accession>
    <name>V7CLV9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_002G136400g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLV9"/>
    <dbReference type="SMR" id="V7CLV9"/>
    <dbReference type="STRING" id="3885.V7CLV9"/>
    <dbReference type="Gramene" id="ESW30240">
        <property type="protein sequence ID" value="ESW30240"/>
        <property type="gene ID" value="PHAVU_002G136400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1552">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QMCSFYY"/>
    <dbReference type="OrthoDB" id="446723at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277">
        <property type="entry name" value="ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12277:SF139">
        <property type="entry name" value="ALPHA_BETA-HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="alpha/beta-Hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW30240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="401" mass="44729" checksum="D236AEF24DEDA260" modified="2014-02-19" version="1">MGCMVSQLAAKFAFFPPSPPTYHLKKRDDGKLTVVSPAAPIPHADDTSLDVLLVDTKHGNKIVAFYLRNPYARLTLLYSHGNAADLGQLYDLFVQLKVNLRVNLMGYDYSGYGASTGKPSESSTYADIEAIYECLETEYGVSQEDVILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCFDIYKNINKVKKVKCPVLVIHGTEDEVVNWLHGNGLWKMARESYEPLWIKGGGHCNLELYPDYIRHLCKFIQEMENMTTEKRLKKIRQSAKESKSNCSSCCRMTCCRVKCPDCSNCCSDCMNVSWSINCPECCWRPSCIKGCCFLKFPSCLGSFCCTKCSWPRCCGVTKCSLPSCYPKYARPSCCCKSCFCWQCCVGKHSNGTNGKQNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMB2</accession>
    <name>V7CMB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G224200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMB2"/>
    <dbReference type="SMR" id="V7CMB2"/>
    <dbReference type="Gramene" id="ESW31269">
        <property type="protein sequence ID" value="ESW31269"/>
        <property type="gene ID" value="PHAVU_002G224200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUCU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MDVRVVK"/>
    <dbReference type="OrthoDB" id="676979at2759"/>
    <dbReference type="PhylomeDB" id="V7CMB2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000062">
        <property type="entry name" value="protein STRUBBELIG-RECEPTOR FAMILY 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000095">
        <property type="entry name" value="protein STRUBBELIG-RECEPTOR FAMILY 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000125">
        <property type="entry name" value="Protein STRUBBELIG-RECEPTOR FAMILY 8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013210">
        <property type="entry name" value="LRR_N_plant-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046959">
        <property type="entry name" value="PRK1-6/SRF4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48007">
        <property type="entry name" value="LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48007:SF22">
        <property type="entry name" value="PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08263">
        <property type="entry name" value="LRRNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="299"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="11">
        <location>
            <begin position="422"/>
            <end position="700"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="350"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW31269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="700" mass="76874" checksum="D515035A10642744" modified="2014-02-19" version="1">MGCWNSDLNLQIFIFSMLTFSATFCVGDTDPLDVAAINSLYVALGSPPLEGWKALGGDPCLEQWEGVSCVFSNITALRLGGMSLSGQLGSNLDFPSIIELDLSNNHIGGAIPSTLSPTLKNLSLAANQLNGSIPDALSSLTQLSDLSLKDNHLNGQIPDAFLQFTGLLNMDLSGNNLSGQLPPSMGNLSSLITLHLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPAPVAMSPSPEISPWKVANNPSATTLKAPIPAIAERSFRTKKLVWIAGAGFLIFIALGVCLLILWCFKRRPENKSYKKHNMNVYRRSLHKRTSSESTFEATDDEEKGWDSKLPPLQPAPPYQLPIIPEENLIINPAIFGKATKRQIVTNSIKVYTVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLGVRKLNATASMGQNHEQFLQLVSSVSKIQHANIVKLMGYCAEYSIHLLVYEYCSNGTLHDALHTDDKLRINLSWDDRIKVSLGAARALEYLHEYFQPPIVHRNFTSANVLLNDKLEVQVSDCGLGSLLSSGFASQLTGHQLTAHGYSAPEYNNGSYTLQSDVFSFGVVMLELLTGRKSYDSSLPRAEQFLVRWAIPQLHDIDALSKMVDPSLKGEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMD1</accession>
    <name>V7CMD1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G225900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMD1"/>
    <dbReference type="STRING" id="3885.V7CMD1"/>
    <dbReference type="Gramene" id="ESW31289">
        <property type="protein sequence ID" value="ESW31289"/>
        <property type="gene ID" value="PHAVU_002G225900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1239">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TGYGFCR"/>
    <dbReference type="OrthoDB" id="2148490at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032977">
        <property type="term" value="F:membrane insertase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032979">
        <property type="term" value="P:protein insertion into mitochondrial inner membrane from matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001708">
        <property type="entry name" value="YidC/ALB3/OXA1/COX18"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428:SF34">
        <property type="entry name" value="MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428">
        <property type="entry name" value="OXA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="220" mass="24298" checksum="73812C292BD8AF34" modified="2014-02-19" version="1">MAYRRCLLIRGNLVDRRCHPSFSYVLHNDEGRQEKSEEKSSSAGVSNFAQIRSFGSSLNGPLGFSAPSRDRFFSPCTGYGFCRYMSTVNQGSDKIDSDIITDVADVLTDTTIDTIASQAPIINEVAIAAADSFLLVKGLQYVIDAVHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHLEEIKQQMDGMAMDPVAVAKGQQQMKKLFKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMS0</accession>
    <name>V7CMS0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Transmembrane protein 45B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G131900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM45 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMS0"/>
    <dbReference type="SMR" id="V7CMS0"/>
    <dbReference type="Gramene" id="ESW30186">
        <property type="protein sequence ID" value="ESW30186"/>
        <property type="gene ID" value="PHAVU_002G131900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU0J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="APEWDQK"/>
    <dbReference type="OrthoDB" id="551896at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006904">
        <property type="entry name" value="DUF716"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47119">
        <property type="entry name" value="PLANT VIRAL-RESPONSE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47119:SF1">
        <property type="entry name" value="PLANT VIRAL-RESPONSE FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04819">
        <property type="entry name" value="DUF716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="154"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="236"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW30186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="275" mass="30393" checksum="0CA1ED6ECB86A678" modified="2014-02-19" version="1">MGSFKGHALPGTLFLLVGLWHIWASVVRYVRNPKTFQVRVWNPVPGFDGRLKHLELYVITIGAFIDMCIELLYSTHLKFFVDGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQNTRFLPLPEGALCLIAASAFSAEYLLFYFHSTTHKGLEGYYHTLLVFLVGLCILSSIAGAFLPTSFPVDLCNGIAIALQGLWFYQTAFVLYGPMMPSGCKLGDNSVTCHSADSEVRGELLANLQLFVAVLVVLVGTVVSYGFAASRYGSYEVKSLHAIQVEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CP28</accession>
    <name>V7CP28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G210700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CP28"/>
    <dbReference type="Gramene" id="ESW31118">
        <property type="protein sequence ID" value="ESW31118"/>
        <property type="gene ID" value="PHAVU_002G210700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0061">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PPITLEW"/>
    <dbReference type="OrthoDB" id="66620at2759"/>
    <dbReference type="PhylomeDB" id="V7CP28"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03213">
        <property type="entry name" value="ABCG_EPDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:001533">
        <property type="entry name" value="ABC transporter G family member 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC2_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043926">
        <property type="entry name" value="ABCG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052215">
        <property type="entry name" value="Plant_ABCG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48042">
        <property type="entry name" value="ABC TRANSPORTER G FAMILY MEMBER 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48042:SF14">
        <property type="entry name" value="WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19055">
        <property type="entry name" value="ABC2_membrane_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="397"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="431"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="472"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="508"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="536"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="626"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="57"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW31118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="664" mass="74042" checksum="2B9D4B912F4E79D2" modified="2014-02-19" version="1">MMSSVHSDFLIQEDNILEGTKTETTLHMLMAEEAEGDDTKSIEMSVRVQGEKEDITVTWDNLWVTVSSGKKKKPILQGLTGYASPGRILAIMGPSGCGKSTLLDSLAGRLSSKMKHTGKILINGQKQTLAYGTSGYVTQEDAMLSTLTAGETLYYSAQLQFPDSMSTAEKKEQADITLREMGLQGAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIATLNLRDGIRRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRMINKDFEQDAEEGFGKGVSTEKAIDTLVKSYRLSQVRKQVKREMQKIVECDSCEKRKRIHAAFPTQCFVLIRRSSLQFFRDISNYWLRLIVFIVIAISIGSIFYNIGTDNGSIQGRGSLLIFFVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGITAFLIGHTFSAVPYMVMISLIPGGIAYHLCGLHKGLDRFFYFTCLLFGIVMWVESLMLVIGSISPNYVIGMFLAGGVEGLMIVTGGFYRLPNDLPKPLWKYPFYYVSFLKYALQGSFKNDFDGLTFSVNPDGGGTASMSGREVLAHTWHVEMNHSKWVDLAIMFGMIVLYRVLFLVITKFKEKFKPFLASITLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQQ2</accession>
    <name>V7CQQ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase</fullName>
            <ecNumber evidence="1">3.2.2.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G323200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>NAD(+) + H2O = ADP-D-ribose + nicotinamide + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16301"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57967"/>
            <dbReference type="EC" id="3.2.2.6"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:16302"/>
        </physiologicalReaction>
    </comment>
    <dbReference type="EC" id="3.2.2.6" evidence="1"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQQ2"/>
    <dbReference type="STRING" id="3885.V7CQQ2"/>
    <dbReference type="Gramene" id="ESW32444">
        <property type="protein sequence ID" value="ESW32444"/>
        <property type="gene ID" value="PHAVU_002G323200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SI7S">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MSGHFAG"/>
    <dbReference type="OrthoDB" id="1434263at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061809">
        <property type="term" value="F:NAD+ nucleosidase activity, cyclic ADP-ribose generating"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10140:FF:000007">
        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045344">
        <property type="entry name" value="C-JID"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058546">
        <property type="entry name" value="RPS4B/Roq1-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF568">
        <property type="entry name" value="ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20160">
        <property type="entry name" value="C-JID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23286">
        <property type="entry name" value="LRR_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="8">
        <location>
            <begin position="15"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW32444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1120" mass="126437" checksum="B8B9AB09A097B6AD" modified="2014-02-19" version="1">MSGSSSSFPVSTSLTKHDVFLSFRGEDTRDNFISHLYAALQRKNIEAYIDYRLNRGEEISPALLSAIEESKIYVIVFSQDYASSTWCLNELTKILECKKRFGRDVIPVFYKVDPSTIRKQEQRYNEAFEKHEQHLKHDKVQGWKDALTEAAKLAGWDSKVTRPEHALVEEIVEDILRKLNRYSTSYDQGIIGIEKNIEGIQSLLHLESTDVRIIGICGMGGIGKTTICNQIYQKLAVQFDSSSLVLDVQEKIQRDGIDSIRRKYLSVLLKEEIKKSPDLSYYNERLKRTKAILILDDVTDSAILKKLIGGSGSFGQGSRIIMTSRDRQVLRNAGADDIYEVKELNFDDSHKLFSLHAFKQKSSAEKSYMDLSEKVLRYAKGIPLALQILGSLLYGRTREAWESELQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYRGHEEIEVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIEEMGKEIVRKECPQHPGKRSRLFNAEEICEVLRKNKGSDAIQCILLDTSKIKLNTYQMCLNLPNLKRLNLSHSLKLTRIPDLSLSPNIEELILSYCQKLIKVHSSIFLSKLSCLCLDHCYHLKSVNIPNKILSTSPGLIILSHCEELEMFSTSQPRYLHVKLEGQRPTFSSLLLGGTVKFHNAKGIFPTSSEISSISFDRYNEEEVGNNTIYSQCEVSTILEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSDMKFLKQLSLRGCSKLENLPQIQDTLEDLVVLILDDTAIQALPSSLCRLVGLQQLSLCSCFNLEIIPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGIVNLPESVAHLSSLKSLDLSDCKKLECIPEIPPFLKKLVALDCPSIRRVMSNSLVPNLSNSKEGFFKFLLTNAQQLDSGGRANIEEDARLRMTDDRYRCVFFCFPGSAVPGWFHFRGKGHSVTINEDLSFLSDDRLSGFALCVVFEVLDTKVVKDGMMKREVLIKITHWCGNLTWSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRB2</accession>
    <name>V7CRB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">mannan endo-1,4-beta-mannosidase</fullName>
            <ecNumber evidence="4">3.2.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G012600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Random hydrolysis of (1-&gt;4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.</text>
            <dbReference type="EC" id="3.2.1.78"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.78" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRB2"/>
    <dbReference type="SMR" id="V7CRB2"/>
    <dbReference type="STRING" id="3885.V7CRB2"/>
    <dbReference type="Gramene" id="ESW32727">
        <property type="protein sequence ID" value="ESW32727"/>
        <property type="gene ID" value="PHAVU_001G012600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS4Q">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NRIRMKI"/>
    <dbReference type="OrthoDB" id="406631at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016985">
        <property type="term" value="F:mannan endo-1,4-beta-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000012">
        <property type="entry name" value="Mannan endo-1,4-beta-mannosidase 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045053">
        <property type="entry name" value="MAN-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31451">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31451:SF60">
        <property type="entry name" value="MANNAN ENDO-1,4-BETA-MANNOSIDASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF26410">
        <property type="entry name" value="GH5_mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004756071" description="mannan endo-1,4-beta-mannosidase" evidence="8">
        <location>
            <begin position="26"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="domain" description="Glycoside hydrolase family 5" evidence="9">
        <location>
            <begin position="31"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF26410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW32727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="415" mass="46838" checksum="46B2FA8FFDF483E7" modified="2014-02-19" version="1">MKLGFFLFSLIFYLILEYGIFKVEGDDLGDEFVKVRGVQLVLNERPYYANGYNAYWLMYMASDPSQRNKVTSAFQVAANHGLSIARTWAFSDGGDRPLQYSPGSYNEDMFLGLDFVISEARRYGTKLVLSLVNNYDNFGGKKQYVEWAKSEGQSLHSEDDFFTNPLVKGFYKNHVKSVLTRRNNFTGVVYKDDPTIMAWELMNEVRCPSDHSGNTVQAWITEMASYLKSIDGNHLLEVGLEGFYGPSKKESNPNFQVGTDFIANNQIPGIDFATVHSYPDQWLPGSSNEEQTLFLVSWLNDHIKDAQSIQKPVLFAEFGVARKNMSSDSTAIRDQFYNLVYSAIYSSASDGGAATGGLFWHLLAEGMDAFNDGYEVPLDENSSTATLIAQESQKLNRIRMKKSSRVKNKARKVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRP4</accession>
    <name>V7CRP4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transcription initiation factor IIE subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G287100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the TFIIE beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRP4"/>
    <dbReference type="SMR" id="V7CRP4"/>
    <dbReference type="STRING" id="3885.V7CRP4"/>
    <dbReference type="Gramene" id="ESW32028">
        <property type="protein sequence ID" value="ESW32028"/>
        <property type="gene ID" value="PHAVU_002G287100g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32029">
        <property type="protein sequence ID" value="ESW32029"/>
        <property type="gene ID" value="PHAVU_002G287100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3095">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QQEKCQA"/>
    <dbReference type="OrthoDB" id="3907302at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005673">
        <property type="term" value="C:transcription factor TFIIE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001097">
        <property type="term" value="F:TFIIH-class transcription factor complex binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006367">
        <property type="term" value="P:transcription initiation at RNA polymerase II promoter"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040501">
        <property type="entry name" value="TFA2_Winged_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016656">
        <property type="entry name" value="TFIIE-bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003166">
        <property type="entry name" value="TFIIE_bsu_DNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12716:SF8">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12716">
        <property type="entry name" value="TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18121">
        <property type="entry name" value="TFA2_Winged_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016398">
        <property type="entry name" value="TFIIE-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51351">
        <property type="entry name" value="TFIIE_BETA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="TFIIE beta" evidence="9">
        <location>
            <begin position="58"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="223"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="28"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR016398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW32028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="279" mass="31482" checksum="673B1E56A915F901" modified="2014-02-19" version="1">MALQERLDKFKKQQEKCQTTLSSIAASKAAASQKSAAHGSANGRNAPPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQACYVDIKANKDVFENLRKNPKVNYDGLRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKLHIKVDDDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS06</accession>
    <name>V7CS06_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">LIM zinc-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G028200g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="12" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Interacts with F-actin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS06"/>
    <dbReference type="Gramene" id="ESW32913">
        <property type="protein sequence ID" value="ESW32913"/>
        <property type="gene ID" value="PHAVU_001G028200g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW32914">
        <property type="protein sequence ID" value="ESW32914"/>
        <property type="gene ID" value="PHAVU_001G028200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1700">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PHCPTTN"/>
    <dbReference type="OrthoDB" id="6129702at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005856">
        <property type="term" value="C:cytoskeleton"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051015">
        <property type="term" value="F:actin filament binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051017">
        <property type="term" value="P:actin filament bundle assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd09440">
        <property type="entry name" value="LIM1_SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd09441">
        <property type="entry name" value="LIM2_SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.110.10:FF:000002">
        <property type="entry name" value="LIM domain and actin-binding 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.110.10">
        <property type="entry name" value="Cysteine Rich Protein"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001781">
        <property type="entry name" value="Znf_LIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24206">
        <property type="entry name" value="OS06G0237300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00412">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00132">
        <property type="entry name" value="LIM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57716">
        <property type="entry name" value="Glucocorticoid receptor-like (DNA-binding domain)"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00478">
        <property type="entry name" value="LIM_DOMAIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50023">
        <property type="entry name" value="LIM_DOMAIN_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0009">Actin-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="5 8" id="KW-0440">LIM domain</keyword>
    <keyword evidence="3 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LIM zinc-binding" evidence="10">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="LIM zinc-binding" evidence="10">
        <location>
            <begin position="107"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="171"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="171"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW32914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="196" mass="21743" checksum="3E8EE122E33F5C20" modified="2014-02-19" version="1">MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIAKPEKTLEEKPGAAKVSSMFGGTREKCAGCQKTVYPTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHEKSESNGKINGEEVSAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7CS57</accession>
    <name>V7CS57_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Centromere protein C/Mif2/cnp3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_002G299500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CENP-C/MIF2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW32173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CS57"/>
    <dbReference type="STRING" id="3885.V7CS57"/>
    <dbReference type="Gramene" id="ESW32173">
        <property type="protein sequence ID" value="ESW32173"/>
        <property type="gene ID" value="PHAVU_002G299500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR44">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TSCPNEM"/>
    <dbReference type="OrthoDB" id="1939643at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000776">
        <property type="term" value="C:kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019237">
        <property type="term" value="F:centromeric DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051315">
        <property type="term" value="P:attachment of mitotic spindle microtubules to kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051382">
        <property type="term" value="P:kinetochore assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051455">
        <property type="term" value="P:spindle attachment to meiosis I kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028386">
        <property type="entry name" value="CENP-C/Mif2/cnp3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16684">
        <property type="entry name" value="CENTROMERE PROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16684:SF11">
        <property type="entry name" value="CENTROMERE PROTEIN C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0539">Nucleus</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="82"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="160"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="412"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="110"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="426"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="461"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW32173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="558" mass="62598" checksum="8209230E2F9F31C2" modified="2014-02-19" version="1">MEEEGDALVDPLANYWGISLFTSPSLPPSQPYNSDLDLHTIHSHLKSMALRSPAKLVQEAKLALDDDPNLFDSEIFRDSISQTTSISQTTNDAGEDGEFRREQRPGLGLKRPRFSMKPTKKPSVESLLPTLDLDSLKDPAEFFLAHERLENAKREIQKQLGGASFESDQDSLSTRPRQRRPGLLRNDQLPIRYKHRYPRETSESVLSSQDALGSQTLDPLAEKIDVDEAYMISSEKEVMDSSAIKGNEFDELLDGLLSCNSEDLEGDGAISLLQERLQIKLVAVDKFSFPIFPDSQVTDLKSLQRNKSLQGNKSKPRKALSDIDNLLKGIITNKKTPLKKSEQFTVQQLSSPTPPRSPFASILSLQKHISRSRQSLDSFSLDEISMDNSEPNLVSGRPNEMNTRMIEHVVAVADQSDPAGYQASAVDKRASRSEDDQSNPTEYQAYIVQEKTDDSMEPVKNQKKRVKSRAKKNVSKRKSLADSGTSWNDGLRRSTRIRTRPLEYWKGERPVYGRVHQSLATVIGVKCMSPGTDGKPTMKVKSYVSDLHKELFELASLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CV47</accession>
    <name>V7CV47_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Protein phosphatase</fullName>
            <ecNumber evidence="11">3.1.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G015900g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9 11">
            <text>O-phospho-L-seryl-[protein] + H2O = L-seryl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20629"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:47004"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="EC" id="3.1.3.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the PP2C family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.16" evidence="11"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW32771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CV47"/>
    <dbReference type="SMR" id="V7CV47"/>
    <dbReference type="Gramene" id="ESW32771">
        <property type="protein sequence ID" value="ESW32771"/>
        <property type="gene ID" value="PHAVU_001G015900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1379">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KPMAACG"/>
    <dbReference type="OrthoDB" id="60843at2759"/>
    <dbReference type="PhylomeDB" id="V7CV47"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="FunFam" id="3.60.40.10:FF:000138">
        <property type="entry name" value="5-azacytidine resistance protein azr1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039123">
        <property type="entry name" value="PPTC7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12320:SF83">
        <property type="entry name" value="PROTEIN PHOSPHATASE 2C 55-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13672">
        <property type="entry name" value="PP2C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8 11" id="KW-0464">Manganese</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 11" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="13">
        <location>
            <begin position="262"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="233"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00047761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00048336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU366020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW32771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="507" mass="53857" checksum="403469EF64AF7F08" modified="2014-02-19" version="1">MPSNYLSRLGASIQRSVLGKERGILDSAEILIGQGKLWFGSSKFFHSVHSSYCVELSLLVRPGFALASSSELPGKRRTLSVVDTLSRTFSVPSVSGPSFQACGYHIGSALAGPDQFSSGGSGFRIKGMASHLPGVVLGESYLDNQSLKGVHRSVSTKSFGSICLNTSLRSGGKVSMSLKNHQQPDNSAIYGYFIYNAAKTWFNSHPYMQLGSGDFHSLSTLCYSVGPAHDVPFDTSVREDQSSSSADSSERKTPSGKTLKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNSGYYSRELMSKSVDAIQEEPKGSIDPARVLEKAHSSTKAKGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTVFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYIAGSADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWD8</accession>
    <name>V7CWD8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">WD repeat-containing protein 4 homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_001G153300g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">tRNA modification; N(7)-methylguanine-tRNA biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Forms a heterodimer with the catalytic subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the WD repeat TRM82 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWD8"/>
    <dbReference type="SMR" id="V7CWD8"/>
    <dbReference type="STRING" id="3885.V7CWD8"/>
    <dbReference type="Gramene" id="ESW34444">
        <property type="protein sequence ID" value="ESW34444"/>
        <property type="gene ID" value="PHAVU_001G153300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3914">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SWHCIRT"/>
    <dbReference type="OrthoDB" id="339900at2759"/>
    <dbReference type="UniPathway" id="UPA00989"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043527">
        <property type="term" value="C:tRNA methyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106004">
        <property type="term" value="P:tRNA (guanine-N7)-methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001042">
        <property type="entry name" value="tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.130.10.10:FF:001350">
        <property type="entry name" value="tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_03056">
        <property type="entry name" value="TRM82"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028884">
        <property type="entry name" value="Trm82"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16288:SF0">
        <property type="entry name" value="TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT WDR4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16288">
        <property type="entry name" value="WD40 REPEAT PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50294">
        <property type="entry name" value="WD_REPEATS_REGION"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 6 7" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="53"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="7">
        <location>
            <begin position="188"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_03056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW34444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="417" mass="44598" checksum="630656122C1892BB" modified="2014-02-19" version="1">MDSEPKKDIEVAPALIAVHPYQCSVAVAVGHHLRVFDLLAGSAVSLTDDSAAVPFHTDNIRAIRFGAKGKLFVSAGDDKTVKVWSTESWSCITSVSSEKRVSAVAISDDGTYVCFADKFGLVWVVDLDPPLRDKKPSPLLSHYCSIITSLEFSPDGRFILSADRDFKIRVTCFPEKPLNGAHQIQSFCLGHTEFVSCLAFVQALECPQGLLLSGSGDSTVRLWNVDSGALLDTCEVAIKAGLVESDGKAEEHDHAVTDLCTVLDGLLVAVAIQSLQGIILLSCNVSAKTLSVAKVVLMAGEAFVPTCLGSSPSTGKLWMVTGVSNLPGCNYPALARVRVISGIDVEQEPVVVGDDNIPGGEKLLETLQGNASVDDNTFLAAAEAVKTAMDHLLIKKQYPSANRESRKKCRNDRKLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWF2</accession>
    <name>V7CWF2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G089600g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWF2"/>
    <dbReference type="SMR" id="V7CWF2"/>
    <dbReference type="STRING" id="3885.V7CWF2"/>
    <dbReference type="Gramene" id="ESW33678">
        <property type="protein sequence ID" value="ESW33678"/>
        <property type="gene ID" value="PHAVU_001G089600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0677">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="5132116at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.640.10">
        <property type="entry name" value="Actin, Chain A, domain 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004000">
        <property type="entry name" value="Actin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11937">
        <property type="entry name" value="ACTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="Actin-like ATPase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW33678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="14163" checksum="C2B4D3C7B17CBCA2" modified="2014-02-19" version="1">MNVVGRHITSYLVDLFSRRGYGLNRTADFETLPNGRVIKVGTQRFQAPQALFTHGFNSSHGDEMADMVFRCIQEMDIDNGMMDPPRRKHMVYLGGAVLAGIMKFWMNREDYPEEGIACLSRCGQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CX80</accession>
    <name>V7CX80_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">adenylate kinase</fullName>
            <ecNumber evidence="4">2.7.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">ATP:AMP phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G173800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + ATP = 2 ADP</text>
            <dbReference type="Rhea" id="RHEA:12973"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.3"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the adenylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.3" evidence="4"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CX80"/>
    <dbReference type="SMR" id="V7CX80"/>
    <dbReference type="STRING" id="3885.V7CX80"/>
    <dbReference type="Gramene" id="ESW34704">
        <property type="protein sequence ID" value="ESW34704"/>
        <property type="gene ID" value="PHAVU_001G173800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3078">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCATKLI"/>
    <dbReference type="OrthoDB" id="439792at2759"/>
    <dbReference type="PhylomeDB" id="V7CX80"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004017">
        <property type="term" value="F:AMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006259">
        <property type="entry name" value="Adenyl_kin_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01351">
        <property type="entry name" value="adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="NUCLEOTIDE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00406">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW34704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="29208" checksum="1AD94958449FD7E9" modified="2014-02-19" version="1">MAAITRLVKRTPYLPCAARRFLSHAPLHKERNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRSELASNGPLSSQLSEIVNQGKLVSDEIIMNLLSKRLADGEAKGESGFILDGFPRTMKQAEILEGVTDIDLVVNLKIQEEALLAKCLGRRICNECGGNFNVASISIKGENGRPSMVMDPLLPPAHCMSKLITRSDDTEAVVQERLRIYSEKSQPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALDLYDYEEKQSVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7D017</accession>
    <name>V7D017_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G257300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D017"/>
    <dbReference type="SMR" id="V7D017"/>
    <dbReference type="STRING" id="3885.V7D017"/>
    <dbReference type="Gramene" id="ESW35699">
        <property type="protein sequence ID" value="ESW35699"/>
        <property type="gene ID" value="PHAVU_001G257300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRPU">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LVAPGMM"/>
    <dbReference type="OrthoDB" id="5545019at2759"/>
    <dbReference type="PhylomeDB" id="V7D017"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045703">
        <property type="term" value="F:ketoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd05356">
        <property type="entry name" value="17beta-HSD1_like_SDR_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000341">
        <property type="entry name" value="very-long-chain 3-oxoacyl-CoA reductase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051019">
        <property type="entry name" value="VLCFA-Steroid_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43899">
        <property type="entry name" value="RH59310P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43899:SF13">
        <property type="entry name" value="RH59310P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000126">
        <property type="entry name" value="11-beta-HSD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="14"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW35699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="320" mass="35641" checksum="41D0598EC05828AC" modified="2014-02-19" version="1">MECCIISRLRVQPIWFVLLFLVGFLTILKLAFVLVKWVYVNFLRPPKNLRKYGSWAVVTGPTDGIGKSFAFELARKGLNLVLVGRNPDKLKDVSDSIAAKFGKTEVRTVVVDFSGDLDEGVAKIGEAVEGLDVGVLVNNVGVSYPYARFFHEVDEGLLNNLIQVNVVGTTKVTQAVLPGMLKRKRGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRKSSFFVPSTDGYARAGVRWIGYEPRCTPYWPHTLLWAVACSLPEFVVDAWRLWFCLGIRKRGQRKDSTKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="20" xmlns="https://uniprot.org/uniprot">
    <accession>V7D2K4</accession>
    <name>V7D2K4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_001G236200g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D2K4"/>
    <dbReference type="Gramene" id="ESW35456">
        <property type="protein sequence ID" value="ESW35456"/>
        <property type="gene ID" value="PHAVU_001G236200g"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW35456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="123" mass="14580" checksum="F447CCD7E1741758" modified="2014-02-19" version="1">MSLGSVTRREFRIPHGANFQLVFDKSGRFICKRLSPMFMSVKAQRCLRFECTCVKMKYEFWIHGCWENSVNEKVPLVEKSLVIKKLHFFEVENLSSKFAHCYFNSLPSFLLSHTYKQCQSKFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7D385</accession>
    <name>V7D385_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">O-fucosyltransferase family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_001G255600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D385"/>
    <dbReference type="STRING" id="3885.V7D385"/>
    <dbReference type="Gramene" id="ESW35681">
        <property type="protein sequence ID" value="ESW35681"/>
        <property type="gene ID" value="PHAVU_001G255600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU4K">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NINPYMA"/>
    <dbReference type="OrthoDB" id="1882547at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11299">
        <property type="entry name" value="O-FucT_plant"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024709">
        <property type="entry name" value="FucosylTrfase_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052272">
        <property type="entry name" value="GT106_glycosyltransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31933">
        <property type="entry name" value="O-FUCOSYLTRANSFERASE 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31933:SF1">
        <property type="entry name" value="PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009360">
        <property type="entry name" value="UCP009360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="10" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="9" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="7"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="47"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW35681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="553" mass="63167" checksum="10145B5262517372" modified="2014-02-19" version="1">MAELRHSSSLGSRASNSPMKRDAVAVGGAGDSSPLIPDSHLADDDEHDRHSSKERDRHVCSFLNDDPRVSPHHSRISLFFTFLLLLVGLVSVFTIFHKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWRPCAERRDGVLSELPHENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPTWFTDKSELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADSLASRMRNQTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYTKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKDELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7D3D0</accession>
    <name>V7D3D0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Signal peptidase complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G260900g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Dispensable for SPC enzymatic activity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SPCS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D3D0"/>
    <dbReference type="SMR" id="V7D3D0"/>
    <dbReference type="STRING" id="3885.V7D3D0"/>
    <dbReference type="Gramene" id="ESW35741">
        <property type="protein sequence ID" value="ESW35741"/>
        <property type="gene ID" value="PHAVU_001G260900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4112">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CTPAWIY"/>
    <dbReference type="OrthoDB" id="263893at2759"/>
    <dbReference type="PhylomeDB" id="V7D3D0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005787">
        <property type="term" value="C:signal peptidase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045047">
        <property type="term" value="P:protein targeting to ER"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009542">
        <property type="entry name" value="Spc1/SPCS1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13202">
        <property type="entry name" value="MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13202:SF0">
        <property type="entry name" value="SIGNAL PEPTIDASE COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06645">
        <property type="entry name" value="SPC12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00045204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW35741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="93" mass="10604" checksum="97F22ABD86E89205" modified="2014-02-19" version="1">MDWQGQKLAEQLMQLMLIAVSVIAFTTGYLMASFQMMILIYAGGVVLTTLVTVPNWPFFNRHPLKWLDPTELEKHPKPQPSLNTTSKKKSVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2013-11-13" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>T2DPH3</accession>
    <name>T2DPH3_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G064400g</name>
    </gene>
    <organism evidence="6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <title>Phaseolus vulgaris (BAT93) Pods Tissue cDNA Library Construction and Random Isolation of cDNA Clones for Gene Discovery.</title>
            <authorList>
                <person name="Amelia K."/>
                <person name="Bhore S.J."/>
                <person name="Shah F.H."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
        <source>
            <tissue evidence="6">Pod</tissue>
        </source>
    </reference>
    <reference evidence="7" key="2">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="3">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="KF033586">
        <property type="protein sequence ID" value="AGV54573.1"/>
        <property type="molecule type" value="mRNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="T2DPH3"/>
    <dbReference type="SMR" id="T2DPH3"/>
    <dbReference type="STRING" id="3885.T2DPH3"/>
    <dbReference type="Gramene" id="ESW25774">
        <property type="protein sequence ID" value="ESW25774"/>
        <property type="gene ID" value="PHAVU_003G064400g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW25775">
        <property type="protein sequence ID" value="ESW25775"/>
        <property type="gene ID" value="PHAVU_003G064400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTWP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NQAFWAA"/>
    <dbReference type="OrthoDB" id="2019920at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009535">
        <property type="term" value="C:chloroplast thylakoid membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:002119">
        <property type="entry name" value="Predicted protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36761">
        <property type="entry name" value="ORF03 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36761:SF2">
        <property type="entry name" value="ORF03 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5010981346" evidence="5">
        <location>
            <begin position="18"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="311"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="155"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="27"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="63"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="101"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="3">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="AGV54573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="331" mass="37578" checksum="160067DED1653A75" modified="2013-11-13" version="1">MAVSLGNLALLLDLALPRAVILERKPRPVGSDVVLSSPPSKRDPPSSSFYALEGDARSRLVLARGMSNSEKNGVEFDSDEEEEGEEEEGGMEDWETQMRRRVREFEARRELEKKAEELQSRVDEGKEETEEEKRMRVRKELEKVAKEQAERRATAQLMFDLGQKAYGKGSYGRAIEFLEAALTIIPRPTLFGGEIQIWLAMAYEAHNRHKDCIALYRQLENTHPSISIRRQAAELRYILQAPKLKISQEEMVTIPLIGSSYDSYAATWSDKNKDKDRRMSGSVTNQLPSSKDYLADFLVWKPPVGLGKSRAFWVGFTIWLGLVGTALLIQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AEG4</accession>
    <name>V7AEG4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G056000g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AEG4"/>
    <dbReference type="SMR" id="V7AEG4"/>
    <dbReference type="STRING" id="3885.V7AEG4"/>
    <dbReference type="Gramene" id="ESW03967">
        <property type="protein sequence ID" value="ESW03967"/>
        <property type="gene ID" value="PHAVU_011G056000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MANNCSK"/>
    <dbReference type="OrthoDB" id="65569at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000020">
        <property type="entry name" value="Beta-glucosidase 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="GH_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018120">
        <property type="entry name" value="Glyco_hydro_1_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF172">
        <property type="entry name" value="GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00572">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753293" evidence="7">
        <location>
            <begin position="26"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW03967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="518" mass="59569" checksum="F11CEE0F206C7256" modified="2014-02-19" version="1">MAFSGYFFLGFLALVLIIRCSKVTCEEAVSVSPIDTSLNRNSFPEGFIFGAGSSSYQFEGAAREGGKGASVWDTFTHKHPDKIKDRSNGDVAIDSYHHYKEDVGMMKDMNLDSYRFSISWSRILPRGKLSGGINQEGINYYNNFINDLVANDIKPFVTLFHWDLPQVLEDEYDGFLSPLIMKDFQDYAELCFKEFGDRVKYWVTLNEPWSYSLFGYANGRMAPGRCSAWMNSNCTGGDSATEPYLVSHHQLLAHAAVVGVYKTKYQASQKGVIGITVVANWFLPLRDSILDHKASERAIDFMYGWFMDPLTFGDYPKSMHSLVGARLPKFTPQQAKLLVGSFDFIGLNYYSTTYVSDAPHLSNVKPSYITDSHLILAYERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYNDPTLSVEESLMDIFRIDYHYRHLFYIKSAIRNGANVKGYYVWSLFDNFEWFLGYTSRFGMIFVDYENSLKRYQKISALWFKKFLKKEIEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AES7</accession>
    <name>V7AES7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Histone H2B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G066600g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2 12">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the histone H2B family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AES7"/>
    <dbReference type="STRING" id="3885.V7AES7"/>
    <dbReference type="Gramene" id="ESW04092">
        <property type="protein sequence ID" value="ESW04092"/>
        <property type="gene ID" value="PHAVU_011G066600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1744">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ANIACNS"/>
    <dbReference type="OrthoDB" id="1421343at2759"/>
    <dbReference type="PhylomeDB" id="V7AES7"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046982">
        <property type="term" value="F:protein heterodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd22910">
        <property type="entry name" value="HFD_H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.20.10:FF:000014">
        <property type="entry name" value="Histone H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.20.10">
        <property type="entry name" value="Histone, subunit A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007125">
        <property type="entry name" value="H2A/H2B/H3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009072">
        <property type="entry name" value="Histone-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000558">
        <property type="entry name" value="Histone_H2B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055333">
        <property type="entry name" value="HISTONE_H2B_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23428">
        <property type="entry name" value="HISTONE H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00125">
        <property type="entry name" value="Histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00621">
        <property type="entry name" value="HISTONEH2B"/>
    </dbReference>
    <dbReference type="SMART" id="SM00427">
        <property type="entry name" value="H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47113">
        <property type="entry name" value="Histone-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00357">
        <property type="entry name" value="HISTONE_H2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0007">Acetylation</keyword>
    <keyword evidence="5 12" id="KW-0158">Chromosome</keyword>
    <keyword evidence="9 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1017">Isopeptide bond</keyword>
    <keyword evidence="11 12" id="KW-0544">Nucleosome core</keyword>
    <keyword evidence="10 12" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0832">Ubl conjugation</keyword>
    <feature type="domain" description="Core Histone H2A/H2B/H3" evidence="14">
        <location>
            <begin position="47"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW04092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16165" checksum="94C6519D4C228581" modified="2014-02-19" version="1">MAPKAEKKPAEKKPAEEKKSTVGDKSPAEKKPKAGKKLPKEGGAGGDKKKKRNKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AG83</accession>
    <name>V7AG83_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G106400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AG83"/>
    <dbReference type="STRING" id="3885.V7AG83"/>
    <dbReference type="Gramene" id="ESW04569">
        <property type="protein sequence ID" value="ESW04569"/>
        <property type="gene ID" value="PHAVU_011G106400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2246">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TIQYQER"/>
    <dbReference type="OrthoDB" id="421979at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006740">
        <property type="entry name" value="DUF604"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10811">
        <property type="entry name" value="FRINGE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04646">
        <property type="entry name" value="DUF604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="10"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW04569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="278" mass="31082" checksum="C9E8DB2EFDA97A89" modified="2014-02-19" version="1">MLQRRKKDQSYSSSSSSSDISMPPFLPIRTTSEPSFKSFILILSILLNLYLLFLTWAPSYAPLTSSTLITTVSPTTRRHLLFSVASSSLSWPRRLPYLRLWYSPNSTRALAFLDKPPPLPLNSSSSSSSPPVVISADTSAFPYTFRGGLRSAIRVARAVKEAVDRNETDVRWFVFGDDDTVFFVDNVVRALARYDHRRWFYVGSNSESYDQNVDHSFEMAFGGGGFAISCSLAEVLARVLDSCLRRYANLYGSDSRIYSCVAELGVGLTHEPGFHQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AH66</accession>
    <name>V7AH66_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G073100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AH66"/>
    <dbReference type="SMR" id="V7AH66"/>
    <dbReference type="STRING" id="3885.V7AH66"/>
    <dbReference type="Gramene" id="ESW04178">
        <property type="protein sequence ID" value="ESW04178"/>
        <property type="gene ID" value="PHAVU_011G073100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CRPTIRT"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7AH66"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47941">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="309"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW04178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="439" mass="50820" checksum="94470782A98A464C" modified="2014-02-19" version="1">MFSFPRNCFKYCASFFRRNVPNETILSTLSFCHKFQDPNEKNLHKICFSNHTHKFDRFLFQINTSYTQFPVPFAPFSFSYSTKAPSRSYRRRARNRLLKSSKPTLDQAQFQLALSQLPPRFTTEELCSVISQQDHPLVCLELFHWASQQPRFRHDVSTYHVTIKKLGAAKMFQEMDDIVNQLLAVPLIGSEALFNTVIYYFTQARKLTRAVNVFKHMKSGRNLVSCYRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVNDGIKPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCQPNALTYDCLVYGLCAQGRTNNAKELCYEMKTKGYVPGSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYRTVLDEICRRGTIQEGKSFLQLLQEKDLVDGHAYRKLLYVLEDDYGDSVSRNMGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AHK5</accession>
    <name>V7AHK5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G147600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AHK5"/>
    <dbReference type="Gramene" id="ESW05049">
        <property type="protein sequence ID" value="ESW05049"/>
        <property type="gene ID" value="PHAVU_011G147600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SBHK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CAIFICD"/>
    <dbReference type="OrthoDB" id="504708at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755543" evidence="1">
        <location>
            <begin position="26"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="99" mass="10768" checksum="B7C50E7041FD1D13" modified="2014-02-19" version="1">MQRMTLVKVALVALIFSFALIACNGFALDEDTCKENDDCKGKLSLCKDSAICVDEVCNCKAPTLWKEGKCTSPSDCPVCITPCDKYCDTDTGLCKCLCH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIY4</accession>
    <name>V7AIY4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="4">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_011G064700g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as an E3 ubiquitin ligase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="4"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIY4"/>
    <dbReference type="SMR" id="V7AIY4"/>
    <dbReference type="STRING" id="3885.V7AIY4"/>
    <dbReference type="Gramene" id="ESW04066">
        <property type="protein sequence ID" value="ESW04066"/>
        <property type="gene ID" value="PHAVU_011G064700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KEAMCSA"/>
    <dbReference type="OrthoDB" id="7537227at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007166">
        <property type="term" value="P:cell surface receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd21037">
        <property type="entry name" value="MLKL_NTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.930.20:FF:000002">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000367">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000690">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000181">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.930.20">
        <property type="entry name" value="Adaptor protein Cbl, N-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036537">
        <property type="entry name" value="Adaptor_Cbl_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR059179">
        <property type="entry name" value="MLKL-like_MCAfunc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057623">
        <property type="entry name" value="PUB12-19-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315">
        <property type="entry name" value="U BOX DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315:SF275">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25368">
        <property type="entry name" value="PUB10_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50176">
        <property type="entry name" value="ARM_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="10">
        <location>
            <begin position="264"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="8">
        <location>
            <begin position="403"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="8">
        <location>
            <begin position="526"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="338"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="644"/>
            <end position="670"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="343"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="9">
        <location>
            <begin position="644"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="654"/>
            <end position="663"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW04066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="670" mass="72823" checksum="D74D680F4745E454" modified="2014-02-19" version="1">MEGENVSKVIDLVSEVASKVIELVNEVASISEYRPPVKKEYCNLARRLKLLIPMFEEIRDMKDPIPKDTSKAVLAFKEALESARELLRFGSEGSKLYLVLERDGIMNKFYEVTARLEQSLGGISYDELDISDEVKEQVELVLAQFRRAKGRVDEPDVRLYEDMLSLYDNSSDAATDPSVLSRLAEKLQLMGIADLTQESLALHEMVSSGGDPGARIEKIAMLLKKIKDYVQTENIVKDDNLGGKGIFAKVYGVGTNEKSHQAPVIPEDFRCPISLELMKDPVIVSTGQTYERSCIEKWLQAGHRTCPKTRQTLTSTVLTPNYVLRSLIAQWCEANGIEPPKRPSSSQPSKSASAYSPAERSKIDGLLQKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLNLSIYENNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIPPLVILLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPSGGMVDEALAILAILASHPDGKATIRAAEAVPVLVEFIGNGSPRNKENAAAVLVHLCSGDQQYLAQAQELGVMGPLLELAQNGTDRGKRKAAQLLERISRLLEQQQEVPTQTETQALNEETQLPLITNPDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="49" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK43</accession>
    <name>V7AK43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_011G098200g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK43"/>
    <dbReference type="SMR" id="V7AK43"/>
    <dbReference type="Gramene" id="ESW04481">
        <property type="protein sequence ID" value="ESW04481"/>
        <property type="gene ID" value="PHAVU_011G098200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0589">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRTQGSH"/>
    <dbReference type="OrthoDB" id="248923at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007017">
        <property type="term" value="P:microtubule-based process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08215">
        <property type="entry name" value="STKc_Nek"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000108">
        <property type="entry name" value="Serine/threonine-protein kinase Nek2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000504">
        <property type="entry name" value="Serine/threonine-protein kinase Nek5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050660">
        <property type="entry name" value="NEK_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43671">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE NEK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43671:SF98">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE NEK11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="12">
        <location>
            <begin position="8"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="272"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="394"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="486"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="569"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="901"/>
            <end position="959"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="277"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="11">
        <location>
            <begin position="337"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="584"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="908"/>
            <end position="922"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="945"/>
            <end position="954"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW04481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1034" mass="114008" checksum="E26C52F7781AA039" modified="2014-02-19" version="1">MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFRPPSTCSPEKSISTVNYPRKNMAESQNSNSSNSDKDSLMSNEKNFATAALPKCDNKATEMDQTSIDDDVSEEENGPGNANGNTKTGEQEVMKPSHNAHHSHVESKQPKTIRNIMMALKEGKAREATSPMRGNRIKPGGVSTTQKISTETLSKLPKPNFIVPIVKPMLESPTISLARATPDSAKKIQGSHHSKQQFLMVEASPKLKARHDLTPPPAVVKQVDGDVVPPKPRQRTPPSLLRRPSFSGRMRLAGIDVPNAPNDTGKLGTDKIVQEHEMSPCQLAKDNVPNFSRQVTKEPQKVFERSSKGMQTDSSNSASSSVSIRGELADDATTFIDMREQMLPVHVNVSHIVGVESCPDSSPPTTCAHCKMVENVPKDSCEIAMNFHNTISSNEKVNSSLSLDHHVEDSEVTLASEGGLLKSQTTMSTTSGCDNGSVDPSAGATKEIKDFQDITKEMPLAKNTQRAPTSSGEKSAHVEVSPESEPDLFVQPAPGCKSPGDDKFTVRERLSPVVETVPLVTPTKLSNQKVLQEKGTVLQNPPERPDTGHLPPAFDEVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTLKSSSCSDVPSLKSDQLEMKNLNTPPILKSSSFSDSSSMKSSNSDHPGLKEQDVSNPPPLVSEPESTELSKSNTPVNEEKLPAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALB5</accession>
    <name>V7ALB5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Eukaryotic translation initiation factor 4G</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Protein synthesis initiation factor 4G</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G043700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eukaryotic initiation factor 4G family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7ALB5"/>
    <dbReference type="STRING" id="3885.V7ALB5"/>
    <dbReference type="Gramene" id="ESW06382">
        <property type="protein sequence ID" value="ESW06382"/>
        <property type="gene ID" value="PHAVU_010G043700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0401">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RSHPIAP"/>
    <dbReference type="OrthoDB" id="514777at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016281">
        <property type="term" value="C:eukaryotic translation initiation factor 4F complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.180:FF:000024">
        <property type="entry name" value="Eukaryotic translation initiation factor 4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.180:FF:000034">
        <property type="entry name" value="Eukaryotic translation initiation factor 4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.180">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003891">
        <property type="entry name" value="Initiation_fac_eIF4g_MI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003890">
        <property type="entry name" value="MIF4G-like_typ-3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23253">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23253:SF79">
        <property type="entry name" value="EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02847">
        <property type="entry name" value="MA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02854">
        <property type="entry name" value="MIF4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00544">
        <property type="entry name" value="MA3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00543">
        <property type="entry name" value="MIF4G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51366">
        <property type="entry name" value="MI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="MI" evidence="8">
        <location>
            <begin position="1430"/>
            <end position="1554"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="164"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="349"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="525"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="649"/>
            <end position="734"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="921"/>
            <end position="940"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1078"/>
            <end position="1100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1208"/>
            <end position="1302"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1331"/>
            <end position="1414"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="18"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Gly residues" evidence="7">
        <location>
            <begin position="31"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="42"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="83"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="101"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="363"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="525"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="535"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="546"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="649"/>
            <end position="658"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="691"/>
            <end position="700"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="722"/>
            <end position="734"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="925"/>
            <end position="937"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1213"/>
            <end position="1230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1231"/>
            <end position="1252"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1260"/>
            <end position="1272"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1289"/>
            <end position="1302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1333"/>
            <end position="1342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1360"/>
            <end position="1373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="1385"/>
            <end position="1395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00067320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00075135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1619" mass="177247" checksum="0AB9011CD2CCADD8" modified="2014-02-19" version="1">MSFNQSKVEKSDVVYRNGRSSGFNQQRGSYGKTGGDGGGINPLSTARSFNKKSNNAQGGQSRLNPSQGNSTESNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPNPPVPKQQKPHGKEAGVNEQSNVEEIKANKDSQAPLQFGGASPQIQSQGMTTTSLQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTTHPVNYFSSNSYNTKSPYYPPNSLPLTNTPMPPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPLTNKTSIPAGITSMTIKPNGTATIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQSKFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIGVPDAIGTKKNHSATIINEDLPRSNTISAAVEVETDGSVEAPGYVSVEGNAAQTIDKVHNQMPDKTYELVEGNFGSSDLQSTDLPKTTPKHVKNDLENVDGESGTKDRPIMEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKESATASLSLKQFDVGQSDIKASEKGDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNGNIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGPEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREVRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSNRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTISNLPISEVVPVPRDSHRMPTGLNGQSNSSERTQYNSREDIGSRHGTNKSLGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQIAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQAIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFPLKTFQPPDAKISRKLEKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALJ8</accession>
    <name>V7ALJ8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transposase-associated domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G145100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALJ8"/>
    <dbReference type="STRING" id="3885.V7ALJ8"/>
    <dbReference type="Gramene" id="ESW05021">
        <property type="protein sequence ID" value="ESW05021"/>
        <property type="gene ID" value="PHAVU_011G145100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SRHC">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KECANIH"/>
    <dbReference type="OrthoDB" id="1395387at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029480">
        <property type="entry name" value="Transpos_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13963">
        <property type="entry name" value="Transpos_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transposase-associated" evidence="1">
        <location>
            <begin position="3"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="151" mass="17613" checksum="836D2B2FEB32BA1C" modified="2014-02-19" version="1">MEKEWAKFPRFSREYIDGLESFLDFAYTRGRPQGREILCPCADCRNCVWARRHVVYDHLIATGFLKGYKVWIHHGEEISSTTKSDDDMIDNEDSQDDIYGLLYNTHRNVVEAKGGKEGPNDEARKFYHLINDANQELYPGTILHSLISYNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMX0</accession>
    <name>V7AMX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">PPM-type phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_010G063200g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMX0"/>
    <dbReference type="SMR" id="V7AMX0"/>
    <dbReference type="Gramene" id="ESW06625">
        <property type="protein sequence ID" value="ESW06625"/>
        <property type="gene ID" value="PHAVU_010G063200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0698">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HYDANAT"/>
    <dbReference type="OrthoDB" id="10264738at2759"/>
    <dbReference type="PhylomeDB" id="V7AMX0"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="entry name" value="PPM-type phosphatase domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007527">
        <property type="entry name" value="Znf_SWIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47992">
        <property type="entry name" value="PROTEIN PHOSPHATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00481">
        <property type="entry name" value="PP2C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="PP2C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50966">
        <property type="entry name" value="ZF_SWIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SWIM-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="PPM-type phosphatase" evidence="3">
        <location>
            <begin position="46"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW06625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="354" mass="38869" checksum="1000B1D2611D9604" modified="2014-02-19" version="1">MGGCCSCSGSFVDKVYDLECSCKHYIDYGACKHGGAGVMLRGSSEFVSMFSQKGSKEVNQDALTVWKDFTGKKDTIFCGVFDGHGPLGHKFARSLREKLPSKLSASIKQSQQKVVKHTNDTDGSSHSNVYVEDDQNMSFSSWEGSFTRCFNEMDEELIKNIDSKGFGGGSTAVTVIKQGDQLIIGNLGDSRAVLCRRAHDNHLVPVQLTVDLTPNIPSEALRIINCGGSIFSLKEQPSVKRIWRPQGARPGLAMARAFGNFCLKDYGLIAVPDVSYRKLTEQDEFVVLASDGVWDVLTNSEVINIVASAPKRSMAANLLVNHAIKAWRRKYGSKVDDCTAICLFLKDQTVWTQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN78</accession>
    <name>V7AN78_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HMA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G103800g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the HIPP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN78"/>
    <dbReference type="SMR" id="V7AN78"/>
    <dbReference type="STRING" id="3885.V7AN78"/>
    <dbReference type="Gramene" id="ESW07127">
        <property type="protein sequence ID" value="ESW07127"/>
        <property type="gene ID" value="PHAVU_010G103800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1603">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TTHYYAH"/>
    <dbReference type="OrthoDB" id="1923658at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051863">
        <property type="entry name" value="HIPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811">
        <property type="entry name" value="COPPER TRANSPORT PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45811:SF32">
        <property type="entry name" value="HEAVY METAL-ASSOCIATED DOMAIN PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="HMA, heavy metal-associated domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0488">Methylation</keyword>
    <keyword evidence="4" id="KW-0636">Prenylation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="7">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="67"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="69"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="157" mass="17963" checksum="F864C2301E3F89E7" modified="2014-02-19" version="1">MKKFVLKLDLHDDKDKQKALKTVSTLSGIDAISMNMKEKKLTVIGTVDPVSVVSKLRKYWQTDIVEVGPVKEPEKKEDAKKAEAKKEGDKKDEQKKEEGKKEEGKKDEKKEDEKKKEPLPDPVLEWVKAQRAAYNPYMTTHYYAPSIEENPNACVIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANE8</accession>
    <name>V7ANE8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase</fullName>
            <ecNumber evidence="1">3.2.2.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G101200g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>NAD(+) + H2O = ADP-D-ribose + nicotinamide + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16301"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17154"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57967"/>
            <dbReference type="EC" id="3.2.2.6"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:16302"/>
        </physiologicalReaction>
    </comment>
    <dbReference type="EC" id="3.2.2.6" evidence="1"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANE8"/>
    <dbReference type="Gramene" id="ESW07099">
        <property type="protein sequence ID" value="ESW07099"/>
        <property type="gene ID" value="PHAVU_010G101200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R41B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AGCKGPV"/>
    <dbReference type="OrthoDB" id="1217440at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061809">
        <property type="term" value="F:NAD+ nucleosidase activity, cyclic ADP-ribose generating"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051707">
        <property type="term" value="P:response to other organism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.8.430:FF:000002">
        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.10140:FF:000007">
        <property type="entry name" value="Disease resistance protein (TIR-NBS-LRR class)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10140">
        <property type="entry name" value="Toll/interleukin-1 receptor homology (TIR) domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045344">
        <property type="entry name" value="C-JID"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044974">
        <property type="entry name" value="Disease_R_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011713">
        <property type="entry name" value="Leu-rich_rpt_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055414">
        <property type="entry name" value="LRR_R13L4/SHOC2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000157">
        <property type="entry name" value="TIR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035897">
        <property type="entry name" value="Toll_tir_struct_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058192">
        <property type="entry name" value="WHD_ROQ1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017:SF559">
        <property type="entry name" value="DISEASE RESISTANCE PROTEIN CHL1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11017">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20160">
        <property type="entry name" value="C-JID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23598">
        <property type="entry name" value="LRR_14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07725">
        <property type="entry name" value="LRR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01582">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23282">
        <property type="entry name" value="WHD_ROQ1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00255">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52200">
        <property type="entry name" value="Toll/Interleukin receptor TIR domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50104">
        <property type="entry name" value="TIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0611">Plant defense</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="TIR" evidence="8">
        <location>
            <begin position="19"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00047304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW07099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1127" mass="127431" checksum="33ED9C8547989CC9" modified="2014-02-19" version="1">MESTNKASSSSTRTSGCSWSNHVFLSFRGEDTRRGFTDHLFASLERKGIKTFKDDHDLERGKAISVELMKAIEDSMFALIILSPNYASSTWCLDELQKIVECEKEAFPIFHGVDPSDVRHQRGSFAKAFQEHEEKFREDKEKVERWRDALRQVASYSGWDSKDQHEATLIETIVGHIQKKLIPRLPCFTDNLVGVDSRMKELNSLMDIWLNDIRFIGIWGMGGIGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRSNDFCNLYDGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTCKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLPLALEVLGSHLCGRSTEVWHSALEQIRSFPHSKIQDTLKISYDSLEPTEKKLFLDIACFFVGMDIDEVVNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLLQEMGRNIVYQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLVQPYDCEARWNTESFSKISQLRLLKLCDMQLPRGLNCLPSALKVVHWRGCPLKTLPLSNQLDEVVDLKLPYSKIEQLWHGTKLLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSLVRHKKLVWLNFEDCKKLKTLPRKMEMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEIKCLEELDVSETAIQELPSFVFYLENLRDISVAGCKGPVSKSVNSFFLPFKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYCNLSEESFPGDFCSLSSLMILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLDASNCTSFEISKFNPSKPCSLFASPAKWHFPKELESVLEKLHLPKERFGMLLTGSEIPPWFSRSKTVSFAKISVPDDCPMNEWVGFALCFLLVSYVVPPDVCSHEVDCYLFGPNGKVFITSRKLPPMEPCDPHLYITYLSFDELRDIICMGSDYREIEFVLKTYCCHSLEIVRCGSRLVCKQDVEDIYGNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANH5</accession>
    <name>V7ANH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Exocyst complex component Sec6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G0827000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANH5"/>
    <dbReference type="STRING" id="3885.V7ANH5"/>
    <dbReference type="Gramene" id="ESW06860">
        <property type="protein sequence ID" value="ESW06860"/>
        <property type="gene ID" value="PHAVU_010G0827000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2286">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="REQEPNT"/>
    <dbReference type="OrthoDB" id="190098at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000145">
        <property type="term" value="C:exocyst"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000149">
        <property type="term" value="F:SNARE binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051601">
        <property type="term" value="P:exocyst localization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006887">
        <property type="term" value="P:exocytosis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010326">
        <property type="entry name" value="EXOC3/Sec6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21292:SF1">
        <property type="entry name" value="EXOCYST COMPLEX COMPONENT 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21292">
        <property type="entry name" value="EXOCYST COMPLEX COMPONENT SEC6-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06046">
        <property type="entry name" value="Sec6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="189"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="209"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="489" mass="55599" checksum="EB5CEF06D25C5DDD" modified="2014-02-19" version="1" fragment="single">MYFLEDAVALDIDLTEVEQSQAGLKSLSLSEKTIKELRENFVSIEKLCQECQTLIDNHDQIKLLSNARNNLNTTLKDVEGMMSISVEASEARDSLSDDKEIVNTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVDRTWETFEKTLWGHVSNFYKLSKESPQTLVRALRVVEMQEILDQQIAEEAAEAEGDGDTAPVANPRKSGIKSTSTMGSSKNLTQQKLKVQGKGYKDKCYEQIRMTVEGRFNKLLSEFVFEDLKAALEEARVIGEELGDVYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGSMDPLMNSYVERMQATTRKWYLNILEADRTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDLMLYRIALATIQVMIDFQAAEKKRLEEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQIYAEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AP61</accession>
    <name>V7AP61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">BED-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_010G101300g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AP61"/>
    <dbReference type="STRING" id="3885.V7AP61"/>
    <dbReference type="Gramene" id="ESW07100">
        <property type="protein sequence ID" value="ESW07100"/>
        <property type="gene ID" value="PHAVU_010G101300g"/>
    </dbReference>
    <dbReference type="OMA" id="NSRREWG"/>
    <dbReference type="OrthoDB" id="1435350at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003656">
        <property type="entry name" value="Znf_BED"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46951">
        <property type="entry name" value="BED-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46951:SF2">
        <property type="entry name" value="BED-TYPE DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02892">
        <property type="entry name" value="zf-BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50808">
        <property type="entry name" value="ZF_BED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="BED-type" evidence="5">
        <location>
            <begin position="19"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW07100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="194" mass="22267" checksum="B6C29C97F3A39A29" modified="2014-02-19" version="1">MFVPFIMASGGDNAKKESIRKDTAWNHCVFIDENSRNVKCKYCEKVLTGGIYILKHHLASISKDVGACLSILEKDKNLMMGIVSMLQQNLIKKSMSREDLDSNVGDYENFRKNTNSRREWGESSSIFKRRETQSTINFIFKKSEREDACQEIVLFFYNNVIPFSVAKGEKFSKMVDMISKYGPDLSHHHTMKSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7APG5</accession>
    <name>V7APG5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_010G053000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APG5"/>
    <dbReference type="STRING" id="3885.V7APG5"/>
    <dbReference type="Gramene" id="ESW06498">
        <property type="protein sequence ID" value="ESW06498"/>
        <property type="gene ID" value="PHAVU_010G053000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RX9W">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CIREVKP"/>
    <dbReference type="OrthoDB" id="591587at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004158">
        <property type="entry name" value="DUF247_pln"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170">
        <property type="entry name" value="BNAC04G53230D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31170:SF9">
        <property type="entry name" value="PROTEIN, PUTATIVE (DUF247)-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03140">
        <property type="entry name" value="DUF247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="419"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW06498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="444" mass="52469" checksum="7E7E3DC10C055C81" modified="2014-02-19" version="1">MGTAVEHNIQHIINIPEEIEPAIWPECCIYKVPTSLLKVKDVAYTPLLVSIGPVHHKNTQLNEMHEQKQRYFHFFWARLSQMSKLDLEHYKAFLELEEKNLRRCYQKKFPDISREQFVEIMLLDAVFIMELFLREAKKWEHKEDHLITQGCVSKSIQCDLMLLENQLPMTVLEKLYDKVVPSNVKNHTRFINLAHEYFGSYYPHEQSSENKFELRKWEKSLHFTDLIRNAYLPKNLSSQKNYSHKECVLRTATKLNEAGISFDMVHDGSLLNVKFEKKRFFSWFLCLGCLPCCKLFKARFLIPQLKVDHTTECVLRNLIAFEQCHYPEEPYICNYVSLIDSLIHTKDDAELLVEKETIVHELGSDQELANLVNDLSKHVVTNSTCYHQIMEDVNEHYNNNWKWAMGTLRWVYFRDPWRSSSTIVGVAVLIFTAFNFYRVTNLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AR51</accession>
    <name>V7AR51_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">aspartate transaminase</fullName>
            <ecNumber evidence="4">2.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Transaminase A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G067200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:21824"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="EC" id="2.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AR51"/>
    <dbReference type="SMR" id="V7AR51"/>
    <dbReference type="STRING" id="3885.V7AR51"/>
    <dbReference type="Gramene" id="ESW06676">
        <property type="protein sequence ID" value="ESW06676"/>
        <property type="gene ID" value="PHAVU_010G067200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1411">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KNAPDCS"/>
    <dbReference type="OrthoDB" id="6752799at2759"/>
    <dbReference type="PhylomeDB" id="V7AR51"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005739">
        <property type="term" value="C:mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00609">
        <property type="entry name" value="AAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000015">
        <property type="entry name" value="Aspartate aminotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1150.10:FF:000001">
        <property type="entry name" value="Aspartate aminotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="entry name" value="Aspartate Aminotransferase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II_large"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000796">
        <property type="entry name" value="Asp_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879:SF14">
        <property type="entry name" value="ASPARTATE AMINOTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00799">
        <property type="entry name" value="TRANSAMINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotransferase class I/classII large" evidence="11">
        <location>
            <begin position="50"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00049185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00053140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW06676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="431" mass="49155" checksum="E87F229195D4A234" modified="2014-02-19" version="1">MWRYINGRMSRRFLSTSCSSARGWWDHVRPAPKDPIVSVNEAFLSDPFPHKINLGMGTYRGDDGKPFIPQSVRDAEIKIQRCKLEELNSSAVRTKFVQECVKLAYGNDSYVVREGLFAGVPTLSGTSACRLFAEFQRHFYPDSQMHLPDPTWSNHHNIWRQAEIPVKTFHYYHPDTRGLDFAALLRDVKNAPDCSFFLLHPCAHNPTGVDPTQEQWREISYQFKVKNHFPFFDMAYQGFSSGDLDKDAMALRIFLEDGHLIGCSQSFSKNMGLSEHKVGCLSVLCQNIKQVAALKSQLQLMSHAMYSSIPFHGISLVAKILSDPDVEALWRKEIKVMANRIETMRTTLRQYLENLESSFNWEHITSQVGMFCFSGLTPDQVKQLEKLFHIYMTPDGRISMAGVTTSNVAYLANAIHQVTRMDEEALSSCYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AS00</accession>
    <name>V7AS00_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_010G1262000g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AS00"/>
    <dbReference type="STRING" id="3885.V7AS00"/>
    <dbReference type="eggNOG" id="KOG0055">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="6500128at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005743">
        <property type="term" value="C:mitochondrial inner membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015421">
        <property type="term" value="F:ABC-type oligopeptide transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090374">
        <property type="term" value="P:oligopeptide export from mitochondrion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd18577">
        <property type="entry name" value="ABC_6TM_Pgp_ABCB1_D1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03249">
        <property type="entry name" value="ABC_MTABC3_MDL1_MDL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.1560.10:FF:000288">
        <property type="entry name" value="ABC transporter B family member 19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:002064">
        <property type="entry name" value="Multidrug resistance protein 1, 2, 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="entry name" value="ABC transporter type 1, transmembrane domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394:SF11">
        <property type="entry name" value="ATP-BINDING CASSETTE TRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43394">
        <property type="entry name" value="ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="ABC transporter transmembrane region"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="278"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="326"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="403"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="427"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="509"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="923"/>
            <end position="946"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="966"/>
            <end position="984"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="13">
        <location>
            <begin position="282"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="12">
        <location>
            <begin position="605"/>
            <end position="841"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="13">
        <location>
            <begin position="929"/>
            <end position="1027"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="152"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="194"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="1"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="28"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="152"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1027"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW07393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1027" mass="112949" checksum="260C03C438A57B27" modified="2014-02-19" version="1" fragment="single">MADSFSFEGDSFSSHQRRHHPTPVSYHSVSGSGSFIPSSFHTDATSTTRTARHNRVPATPFASDDDHSWQEEVSWKFEATGWHHYSTNFGSLLTPWPASSPSDHSRIFRQSANDFYLSRTSRFRGLPSSSYEHSSHGRVELKSYVARDNDHSYFDQRSEPHGLSKSGQSSRKGKSSPLAGEDELSMINYSITEEHLNSPNGNGHGLESPYFKNGHGLPSHDGSHLYGSGGGYSYPHHNIEKYSGYDEEGEENMDEEDASPPKAVGLFSLFRYSTKWDWMLVFVGCLGALINGGSLPWYSYLFGDLVNKISEADKDKKQMMKDVEKICLFMTGLAAVVVVGAYLQITCWRLVGARSAQRIRTQYLRAVLRQDITFFDTDISTGDIMHGIASDVAQIQEVMGEKMAHFIHHIFTFICGYAVGFKRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAIRSIRTVFSFVAENQLAGKYDELLQQSAPLGAKVGFAKGIGMGVIYLITYSTWALAFWYGSVLIAKNELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYVIERIPEIDPYSPEGRKLSGVRGRIELKSVSFAYPSRPDSLILHSLNLILPSSKTVALVGASGGGKSTIFALIERFYDPTEGIITLDGHDLRTLQVKWLREQIGMVGQEPILFATSILENVMMGRDNATKEEAIAACIAADAHSFISSLPLSYDTQAGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNAHTIVVLEHGSVTEIGDHRQLLSKAGAYHNLVKLATEAISKPLAIENGIQKGNDLSIYDKSAAALSGSRYLVDIPGPKDLISMHEEEKQEDMEVHDKIKAKSYRLSEVWKLQRPELVMLFSGLILGMFAGAILSLFPLILGISLEVYFGDDTSKMKRDVSHLCLTLVGLGFGCILSMTGQQGFCGWAGSKLTQRVRDILFQSILRQEPGWFDFEENSTGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AS30</accession>
    <name>V7AS30_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Thaumatin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_009G040100g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thaumatin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AS30"/>
    <dbReference type="SMR" id="V7AS30"/>
    <dbReference type="Gramene" id="ESW08369">
        <property type="protein sequence ID" value="ESW08369"/>
        <property type="gene ID" value="PHAVU_009G040100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QRXP">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CKAYEYA"/>
    <dbReference type="OrthoDB" id="430315at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="CDD" id="cd09218">
        <property type="entry name" value="TLP-PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.110.10:FF:000001">
        <property type="entry name" value="THAUMATIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.110.10">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037176">
        <property type="entry name" value="Osmotin/thaumatin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001938">
        <property type="entry name" value="Thaumatin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017949">
        <property type="entry name" value="Thaumatin_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31048">
        <property type="entry name" value="OS03G0233200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00314">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002703">
        <property type="entry name" value="Thaumatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00347">
        <property type="entry name" value="THAUMATIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00205">
        <property type="entry name" value="THN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49870">
        <property type="entry name" value="Osmotin, thaumatin-like protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51257">
        <property type="entry name" value="PROKAR_LIPOPROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00316">
        <property type="entry name" value="THAUMATIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51367">
        <property type="entry name" value="THAUMATIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753715" description="Thaumatin-like protein" evidence="3">
        <location>
            <begin position="20"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="28"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="76"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="91"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="146"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="151"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="181"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="2">
        <location>
            <begin position="191"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR002703-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW08369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="251" mass="27179" checksum="F287960A0B007E3B" modified="2014-02-19" version="1" fragment="single">MWKLTSLLILFTFFTCSCSYTFTIINNCPHTIWPGTLAGSGSPPLATTGFRLDMRESIKLTTVPGWSGRIWARTGCNFDTTGVGRCQTGDCGGRLECEGNGAAAPTSLFEITLGAGNGQDYYDVSLVDGYNLPLLALPRGVYGGACNATGCITDINRGCPTELQVLGVENQRVVVGCRSACEAFKLDKYCCSGEFANPNTCHPSYYSTLFKKACPRAYSYAFDDGTSTFTCKAYEYDIVFCPNSNGYTPYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT36</accession>
    <name>V7AT36_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Large ribosomal subunit protein mL43</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_010G124900g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the mitochondrion-specific ribosomal protein mL43 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT36"/>
    <dbReference type="SMR" id="V7AT36"/>
    <dbReference type="STRING" id="3885.V7AT36"/>
    <dbReference type="Gramene" id="ESW07376">
        <property type="protein sequence ID" value="ESW07376"/>
        <property type="gene ID" value="PHAVU_010G124900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3445">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="88at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005762">
        <property type="term" value="C:mitochondrial large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032543">
        <property type="term" value="P:mitochondrial translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.30.10:FF:000175">
        <property type="entry name" value="54S ribosomal protein L51, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.10">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039927">
        <property type="entry name" value="Ribosomal_mL43"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007741">
        <property type="entry name" value="Ribosomal_mL43/mS25/NADH_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21396">
        <property type="entry name" value="39S RIBOSOMAL PROTEIN L43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21396:SF2">
        <property type="entry name" value="LARGE RIBOSOMAL SUBUNIT PROTEIN ML43"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05047">
        <property type="entry name" value="L51_S25_CI-B8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00916">
        <property type="entry name" value="L51_S25_CI-B8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="Thioredoxin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal protein/NADH dehydrogenase" evidence="7">
        <location>
            <begin position="18"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00035188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW07376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="147" mass="16993" checksum="2F9F4ADCA9B5770C" modified="2014-02-19" version="1">MALRGVWQLQKLIVSYCNWGGSSRGIRAFMESQLPMLKEKNPQLEVVTELIRGQHPHLKGFYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGKGCDGDFQLKNESHKRRWRLLLPAPLLFSSCTPLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AT84</accession>
    <name>V7AT84_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">cinnamoyl-CoA reductase</fullName>
            <ecNumber evidence="13">1.2.1.44</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Caffeoyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">Coumaroyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="15">Feruloyl-CoA reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">Sinapoyl-CoA reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_010G160700g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(E)-4-coumaraldehyde + NADP(+) + CoA = (E)-4-coumaroyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64652"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28353"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:85008"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="9">
            <dbReference type="Rhea" id="RHEA:64654"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>(E)-caffeyl aldehyde + NADP(+) + CoA = (E)-caffeoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:74867"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28323"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:87136"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="11">
            <dbReference type="Rhea" id="RHEA:74869"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(E)-cinnamaldehyde + NADP(+) + CoA = (E)-cinnamoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10620"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16731"/>
            <dbReference type="ChEBI" id="CHEBI:57252"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="8">
            <dbReference type="Rhea" id="RHEA:10622"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>(E)-coniferaldehyde + NADP(+) + CoA = (E)-feruloyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64648"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16547"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:87305"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="12">
            <dbReference type="Rhea" id="RHEA:64650"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(E)-sinapaldehyde + NADP(+) + CoA = (E)-sinapoyl-CoA + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:64656"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:27949"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57393"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.44"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="10">
            <dbReference type="Rhea" id="RHEA:64658"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Aromatic compound metabolism; phenylpropanoid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.44" evidence="13"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AT84"/>
    <dbReference type="SMR" id="V7AT84"/>
    <dbReference type="STRING" id="3885.V7AT84"/>
    <dbReference type="Gramene" id="ESW07808">
        <property type="protein sequence ID" value="ESW07808"/>
        <property type="gene ID" value="PHAVU_010G160700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1502">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IGREFRF"/>
    <dbReference type="OrthoDB" id="2735536at2759"/>
    <dbReference type="PhylomeDB" id="V7AT84"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016621">
        <property type="term" value="F:cinnamoyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009809">
        <property type="term" value="P:lignin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd08958">
        <property type="entry name" value="FR_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000199">
        <property type="entry name" value="Cinnamoyl-CoA reductase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050425">
        <property type="entry name" value="NAD(P)_dehydrat-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366:SF404">
        <property type="entry name" value="CINNAMOYL-COA REDUCTASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366">
        <property type="entry name" value="NAD DEPENDENT EPIMERASE/DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="18">
        <location>
            <begin position="13"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00050514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00050640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00051133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00051239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00052462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00067006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00075244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00077069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00081990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00082321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW07808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="332" mass="36787" checksum="6B81CA45A2B779B8" modified="2014-02-19" version="1">MPTDTSSVSGETVCVTGAGGYIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLRKLEGAKERLTLHRVDLLDIDSIKAAFHGCHGVFHTASPVTDNPEEMLEPAVNGTKNVIIGAAEEKVRRVVFTSSIGTVYMNPNTSRDVVVDESFWSDLEYCKNTKNWYCYGKTVAEESAWDMAKERGVDLVVVNPVVVIGPLLQPTINASTIHILKYLTGSAKTYVNATQSYVHVKDVALAHVLVYETPSASGRYICAESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNEKLKDLGMEFTPVKQSLYDTVKNLQDNGHLAVPPKQEHSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7ATH3</accession>
    <name>V7ATH3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">MYB transcription factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_010G136000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Binds preferentially double-stranded telomeric repeats.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Chromosome</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus</location>
            <location evidence="2">Nucleolus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ATH3"/>
    <dbReference type="SMR" id="V7ATH3"/>
    <dbReference type="Gramene" id="ESW07511">
        <property type="protein sequence ID" value="ESW07511"/>
        <property type="gene ID" value="PHAVU_010G136000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QTN3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MADYTER"/>
    <dbReference type="OrthoDB" id="608866at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005730">
        <property type="term" value="C:nucleolus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000786">
        <property type="term" value="C:nucleosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003691">
        <property type="term" value="F:double-stranded telomeric DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006334">
        <property type="term" value="P:nucleosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00073">
        <property type="entry name" value="H15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd11660">
        <property type="entry name" value="SANT_TRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000168">
        <property type="entry name" value="Telomere repeat-binding factor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.246.220:FF:000002">
        <property type="entry name" value="Telomere repeat-binding factor 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005818">
        <property type="entry name" value="Histone_H1/H5_H15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044597">
        <property type="entry name" value="SMH1-6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46267">
        <property type="entry name" value="SINGLE MYB HISTONE 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46267:SF3">
        <property type="entry name" value="TELOMERE REPEAT-BINDING FACTOR 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00538">
        <property type="entry name" value="Linker_histone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00526">
        <property type="entry name" value="H15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00717">
        <property type="entry name" value="SANT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51504">
        <property type="entry name" value="H15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50090">
        <property type="entry name" value="MYB_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="13">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Myb-like" evidence="12">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="H15" evidence="14">
        <location>
            <begin position="121"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="56"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="189"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="11">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00053063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW07511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="293" mass="32229" checksum="3E480253BAFDAA28" modified="2014-02-19" version="1">MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGSQGSKDKPRVPKLKALPAPPSATTSSTTTTTLQNAASALQNAHSDVAVPDSSLNDQDVKNPPRYNAMVFEALSALKDNNGSDLNAIVTFIEQKHQVPQNFRRALSTRLRRLVSQGKLEKVQNCYKIKKDVPSGTKSPLPRPKDVRPAPSQPQPQPQWQSSASVFTTSNETVKEAADTAAYRIADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW43</accession>
    <name>V7AW43_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DUF4005 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G078500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="6">Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the IQD family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW08833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW43"/>
    <dbReference type="SMR" id="V7AW43"/>
    <dbReference type="STRING" id="3885.V7AW43"/>
    <dbReference type="Gramene" id="ESW08833">
        <property type="protein sequence ID" value="ESW08833"/>
        <property type="gene ID" value="PHAVU_009G078500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSVK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RARPNYM"/>
    <dbReference type="OrthoDB" id="671489at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd23767">
        <property type="entry name" value="IQCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.190:FF:000062">
        <property type="entry name" value="IQ-domain 11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295">
        <property type="entry name" value="IQ-DOMAIN 5-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32295:SF95">
        <property type="entry name" value="PROTEIN IQ-DOMAIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00612">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00015">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="311"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="414"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="325"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="433"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW08833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="10">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="443" mass="49689" checksum="797A4496C23ED557" modified="2014-02-19" version="1">MGASGKWVKALIGLKKPDKDEHVKEGGKSKKWRLWRSSSGDMGSWKGFKGNHHREASEGSDSPPVLAADAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRGFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKLELLKQAEEGWCDSRGTLEDVKVKIQMRQEGAFKRERAIAYSLAQKQCRSAQSYNSRTTNGSFCSLKSHESNKANWGWTWLERWMAAKPWESRLMEQSQAEALLDKTPLPKKFEEPFVNSNSKPCLVKVKKNNMTTRVSARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYSRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGYDPSINLSRPLHLDKGSVRPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7AW93</accession>
    <name>V7AW93_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G137300g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AW93"/>
    <dbReference type="SMR" id="V7AW93"/>
    <dbReference type="STRING" id="3885.V7AW93"/>
    <dbReference type="Gramene" id="ESW09560">
        <property type="protein sequence ID" value="ESW09560"/>
        <property type="gene ID" value="PHAVU_009G137300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVGB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NITHCHT"/>
    <dbReference type="OrthoDB" id="1899721at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34380">
        <property type="entry name" value="BNAA03G12380D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34380:SF1">
        <property type="entry name" value="OS01G0221300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="341"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="404"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="23"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="100"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="2">
        <location>
            <begin position="373"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="2">
        <location>
            <begin position="412"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="429"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW09560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="574" mass="65373" checksum="B2222B2E84B1920F" modified="2014-02-19" version="1">MKEDKEMSNLNVVSNNMSESCRCNELEERSKKVEMRCAELEFKLQKKDEQCEALEAKLRAFEGEVEVLRVFSEGRKQKKVFNVKEGEVDTVIDLTDDNEVDQLMIENSVLECEKKRFESEVEVWKDRYWKLESWASQLKLESGSYYHEENGKEESDAIRTGGSSHLEPIIDSKMLCAERVKRQLTFETGESPGKKMALSTPSVAKSSSVFAIDIVDSDDEPNIAQHHVLHSEGSRNTFVSSCFTAENEKMSSSYVQNNEEDRNSGEDLPFVVTLKRKRNCNVVTSESESDDDDVPNCKFKRMHIQEVRPDKVRCDTNNLVPASTSADYKVIGSVTPRQRIMPLRKLAKKNEGRTAYTSGKAKHQQSNPTNDTNGDDESQEDLSDCEDEDLSDFIVDDFDELSCDDTSGKSQDASNGDVNSDSSNSQDVPDNHMDDARDVSDEDVDFSKIISQIQRRKDDMEWEFEADMLAAFGKDSELCMKAVCALYQQQTLEEQMSKGTFYTNQRGFSKFDAHRGSTLAEYLTHGDPRGGLKKSVKELHEHDPKAVELCRTFAIRYSKQLYQIYINKENPFFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="59" xmlns="https://uniprot.org/uniprot">
    <accession>V7AWX9</accession>
    <name>V7AWX9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Translation factor GUF1 homolog, chloroplastic</fullName>
            <ecNumber evidence="7">3.6.5.n1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Elongation factor 4 homolog</fullName>
            <shortName evidence="7">EF-4</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">GTPase GUF1 homolog</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Ribosomal back-translocase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_009G157100g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GTP + H2O = GDP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="3.6.5.n1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Plastid</location>
            <location evidence="7">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.n1" evidence="7"/>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AWX9"/>
    <dbReference type="SMR" id="V7AWX9"/>
    <dbReference type="STRING" id="3885.V7AWX9"/>
    <dbReference type="Gramene" id="ESW09800">
        <property type="protein sequence ID" value="ESW09800"/>
        <property type="gene ID" value="PHAVU_009G157100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0462">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
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    <dbReference type="OrthoDB" id="1074at2759"/>
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    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
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        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="F:GTP binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
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    </dbReference>
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        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
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        <property type="term" value="P:positive regulation of translation"/>
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        <property type="project" value="UniProtKB-KW"/>
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        <property type="entry name" value="EF4_II"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="EF4_III"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
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    <dbReference type="CDD" id="cd03709">
        <property type="entry name" value="lepA_C"/>
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        <property type="entry name" value="Elongation factor 4"/>
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        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
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        <property type="entry name" value="Translation factor GUF1, mitochondrial"/>
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        <property type="entry name" value="Elongation Factor G (Translational Gtpase), domain 3"/>
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    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
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        <property type="entry name" value="Translation factors"/>
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    <dbReference type="HAMAP" id="MF_03138">
        <property type="entry name" value="GUFP"/>
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        <property type="entry name" value="LepA"/>
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        <property type="entry name" value="EF-4"/>
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        <property type="entry name" value="EFG_III/V"/>
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    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
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    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
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        <property type="entry name" value="LepA_C_sf"/>
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        <property type="entry name" value="LepA_IV"/>
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        <property type="entry name" value="P-loop_NTPase"/>
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        <property type="entry name" value="Transl_B-barrel_sf"/>
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    </dbReference>
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        <property type="entry name" value="TRANSLATION FACTOR GUF1 HOMOLOG, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TRANSLATION FACTOR GUF1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
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    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06421">
        <property type="entry name" value="LepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="EF-G C-terminal domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="Translation proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0934">Plastid</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="90"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="99"/>
            <end position="106"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="164"/>
            <end position="168"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="218"/>
            <end position="221"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW09800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="687" mass="76678" checksum="9083B46AF5B97036" modified="2014-02-19" version="1">MAAEICGASLFLSVKTQLQQPHHHQRALFHAQRSRTRRTTTRFHSSKRCLSSVFPNASTFRSGVLCQVASTDFDSAAKAGEHRLSKVPVRNIRNFSIIAHIDHGKSTLADKLLQVTGTVQQRDMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIDILNAIVARIPPPEDTSKRPLRALIFDSYYDPYRGVIVYFRIVDGSIKKGDRVYFMASGKDYFADEIGVLSPNQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRKADKSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGSLMELAQERRGQFKEMKFIAENRASLVYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYVENNLIKLDIRINGDCVEPLATIVHNDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAISAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AX94</accession>
    <name>V7AX94_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cycloeucalenol cycloisomerase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G167500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW09925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AX94"/>
    <dbReference type="STRING" id="3885.V7AX94"/>
    <dbReference type="Gramene" id="ESW09925">
        <property type="protein sequence ID" value="ESW09925"/>
        <property type="gene ID" value="PHAVU_009G167500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPR8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PWYRRYW"/>
    <dbReference type="OrthoDB" id="2111841at2759"/>
    <dbReference type="PhylomeDB" id="V7AX94"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047793">
        <property type="term" value="F:cycloeucalenol cycloisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020532">
        <property type="entry name" value="Cycloeucalenol_cycloisomerase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35136">
        <property type="entry name" value="CYCLOEUCALENOL CYCLOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35136:SF1">
        <property type="entry name" value="CYCLOEUCALENOL CYCLOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="207"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW09925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="285" mass="33034" checksum="C3502EB1B68C939C" modified="2014-02-19" version="1">MTASVSPSLWLAPNPSKRWGELFFLLYTPFWLTLCLGIVIPFNLYEKFTELEYLLIGLVSAVPAFVIPMLCVGKADRSIPWKDRYWVKASLWIIIFSYVGNYFWTHYFFTVLGASYTFPSWKMNNVPHTTFLLTHVCFLFYHVSSNMTLRRLRHFIADLPEKIQWATEAAWILALAYFIAYLETLAISNFPYYQFVDRDSMYKVGSLFYAIYFIVSFPMFLRVDEKPGDKWDLPRVAVDALGAAMLVTIILDLWRIFLGPIVLIPDAKQCPQVGLPWITGHANLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7AY21</accession>
    <name>V7AY21_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sugar phosphate transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_009G219500g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AY21"/>
    <dbReference type="SMR" id="V7AY21"/>
    <dbReference type="STRING" id="3885.V7AY21"/>
    <dbReference type="Gramene" id="ESW10552">
        <property type="protein sequence ID" value="ESW10552"/>
        <property type="gene ID" value="PHAVU_009G219500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1441">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QVGNHGA"/>
    <dbReference type="OrthoDB" id="6418713at2759"/>
    <dbReference type="PhylomeDB" id="V7AY21"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004853">
        <property type="entry name" value="Sugar_P_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050186">
        <property type="entry name" value="TPT_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11132">
        <property type="entry name" value="SOLUTE CARRIER FAMILY 35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03151">
        <property type="entry name" value="TPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="38"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar phosphate transporter" evidence="7">
        <location>
            <begin position="11"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="333"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="361"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW10552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="382" mass="42644" checksum="8DBDACAA01367566" modified="2014-02-19" version="1">MINKPLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVAFFLVRVFKIVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVLCGIDKARCDVFLNMLLVSVGVVVSSYGEIHFNTVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFFSNAVCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVRDVRASQNPVESLPDRITKDWKFEKKSSDIYVPDNIDDNEGSSGGNGTASDMKHDEETPLVSSRLSHIGRTQLTNQYATGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZI0</accession>
    <name>V7AZI0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_009G229400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZI0"/>
    <dbReference type="STRING" id="3885.V7AZI0"/>
    <dbReference type="Gramene" id="ESW10680">
        <property type="protein sequence ID" value="ESW10680"/>
        <property type="gene ID" value="PHAVU_009G229400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2895">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="RRSTWPY"/>
    <dbReference type="OrthoDB" id="406287at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006656">
        <property type="term" value="P:phosphatidylcholine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021261">
        <property type="entry name" value="GPCAT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31201:SF9">
        <property type="entry name" value="GLYCEROPHOSPHOCHOLINE ACYLTRANSFERASE 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31201">
        <property type="entry name" value="OS01G0585100 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10998">
        <property type="entry name" value="DUF2838"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="209"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="277"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW10680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="351" mass="41372" checksum="9C6D93ADE7A901E0" modified="2014-02-19" version="1">MAVSDNEDFASDYTDSEPSKKTRRSRFRDRSKEVLSKQAVKIVKRAEEHESFINKVTHLLGVLGFGGFCFLFGARPEAVPLVYCVFYVVFVPLRWIYYRFKKWHYYLLDFCYYANTILLICLLFYPRNEKLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKIVSVLIHLLPGLVLFSIRWWNPTTFEAMRPEGTAARATWPYIEDKSHLWMWLFLVPLAVYILWQVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNMWWRLSGLLGDQNRLLMYILLQGMFTVATTALTVPIFLSYELSVIFQILKISASVWNGGSFLIDVMPRQVILKEKKKSEMQHVPNQNYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AZP6</accession>
    <name>V7AZP6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">GDP-fucose protein O-fucosyltransferase 2</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">O-fucosyltransferase family protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">PHAVU_009G261000g</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Endoplasmic reticulum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="14">Belongs to the glycosyltransferase 68 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glycosyltransferase GT106 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW11049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AZP6"/>
    <dbReference type="STRING" id="3885.V7AZP6"/>
    <dbReference type="Gramene" id="ESW11049">
        <property type="protein sequence ID" value="ESW11049"/>
        <property type="gene ID" value="PHAVU_009G261000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS4M">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HKCKILI"/>
    <dbReference type="OrthoDB" id="422368at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046922">
        <property type="term" value="F:peptide-O-fucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006004">
        <property type="term" value="P:fucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11296">
        <property type="entry name" value="O-FucT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.11350:FF:000005">
        <property type="entry name" value="O-fucosyltransferase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019378">
        <property type="entry name" value="GDP-Fuc_O-FucTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045130">
        <property type="entry name" value="OFUT2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13398">
        <property type="entry name" value="GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13398:SF0">
        <property type="entry name" value="GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10250">
        <property type="entry name" value="O-FucT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="8" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="12" id="KW-0294">Fucose metabolism</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="53"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="17"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00025803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00026232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00030350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="ESW11049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="529" mass="60495" checksum="E994F285CD019EF4" modified="2014-02-19" version="1">MERDSSSDEEEELIHQKQGNAPRSPSSFHFQSLTSRITSNFNFNFKFPFQKRYLFAILPLFAILLYYLLPDSHSLFSLSSVNLNLRHDQPEESQLRALYLLRQQQSGLLHALNSTSQTHILKSLLSNQISLNSQIQHLLLSPYTTATSLHFRNAACGTVDQKLLERRTMEWKPKANKFLVAVCVSGQMSNHLMCLQKHMFFAALLNRVLVIPSSKVDYEYERVLDVEHMNRCAGGKVKAVISFQEFSSMKKNGMHEGKFLCYFSLPRPCYLDDEHLRKLKSLGLLSTNKPAAAWDEDARKPRKRSVEEVVSRFSREEKEDVLVIGDVLYADVEEEWVTQAGGPLAHRCKTLIQPNRLIFLTAQRFIQTFLGRNFLALHFRRHDFLNFCNGKKPSCFYPIPQAAACILRVVERANAPLIYLSTDAAESEIRLLQSLLVLEGRHVPLVKRPPRNSAEKWDALLYRHHIEGDPQVEAMLDKTICAMSSVFIGASGSTFTQDIRRLRKDWGSASLCDEYLCQGEEPNVVAEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0F6</accession>
    <name>V7B0F6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_008G024300g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. P subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0F6"/>
    <dbReference type="SMR" id="V7B0F6"/>
    <dbReference type="STRING" id="3885.V7B0F6"/>
    <dbReference type="Gramene" id="ESW11372">
        <property type="protein sequence ID" value="ESW11372"/>
        <property type="gene ID" value="PHAVU_008G024300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="PhylomeDB" id="V7B0F6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051240">
        <property type="entry name" value="Mito_RNA-Proc/Resp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47933">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47933:SF11">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13812">
        <property type="entry name" value="PPR_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="370"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="442"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="477"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="512"/>
            <end position="546"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="547"/>
            <end position="581"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="582"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="618"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="718"/>
            <end position="752"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="191"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW11372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="768" mass="87010" checksum="A6C6F2FF688BAF12" modified="2014-02-19" version="1">MPLLLSLPFQFHTCLLKLSHSPFLSAPTRTKAYVRTRDSYLGIVFLSQPKYSIGSTGFHESTPKPRDSVHAVVDSGLWEQEEECVDEGREIVDATSFVSKKELPWGELELEDGDDDMEGRGQFDPTIVTKDELCLWGEDDDVEVREEFGTSIVSKEELHPWGVAELDDNDKGIEGVNAYFVSNKELAPWEEVKDDEEDDRNNNGNGNAERRAHGGASFVANKKFSTSTEAEDGDDDFDYNNNYAVERITNGDAYFVAKKELPPWGEAQNGNVVDNNAERRANGEVYIGAKKELAPCGEEDDDGHLYSRPVETTLSAPKGTGLMREHGAIFLEEMDESVLSNRIVVLSRTNKIRSAMEYFKSMEISDLSPNIHACNSLVSSLLRNGWYDDCLKVFNFTRAKGITTGHTYSLILKAHAKAHGCDSALIFFRELESECDVEKDFDAIVYNTMISICRNADNWSEIERLWRSMKENGCAGTCVTYRLLINSFVRCDQNDLAFYAYREMVQNGFEPDNNILNAIICLCAKEGKWDDALSVFKTMLKGELKPNLVACNALINSLGRAGELKQAFQIYKTMKSLDLKPDAYTFNALLSSLNKANRHHKALELFEMIERDQTFQFNIHLYNTVLMSCSKLRLWERAVEILWQMEASGLSNLTMSYNLVIRTCELARRSTIALQVYKHMVHQKCSPNVFTYLSVVRCCVRGNLWEDLEEILNQSMPNATLYNAAIQGLCLRCNVNLANKVYTKMLESGLQPDVKTQVLMLRMIRKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7B0L2</accession>
    <name>V7B0L2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G022600g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B0L2"/>
    <dbReference type="SMR" id="V7B0L2"/>
    <dbReference type="STRING" id="3885.V7B0L2"/>
    <dbReference type="Gramene" id="ESW11349">
        <property type="protein sequence ID" value="ESW11349"/>
        <property type="gene ID" value="PHAVU_008G022600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LYEFAMG"/>
    <dbReference type="OrthoDB" id="777957at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008380">
        <property type="term" value="P:RNA splicing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044578">
        <property type="entry name" value="BIR6-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47003">
        <property type="entry name" value="OS01G0970900 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47003:SF3">
        <property type="entry name" value="SMALL RIBOSOMAL SUBUNIT PROTEIN MS81 (RPPR8)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="125"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="2">
        <location>
            <begin position="434"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW11349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="5">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="629" mass="70759" checksum="43443F70CED52CFA" modified="2014-02-19" version="1">MRYQWRLLHHLLRSRPCIPNHSQVLPSSSSISRRFTVNSSFPLNPSFRRFSSEPVLDHSDNDHVLVADVFSKPTDSDDVKNLVESNRISITHDAVLAVLLKLDSDVDAARRFFQWVSENYPEKLSSKCYNSMLRVLGTNGLVHEFWELVDLMKKKGYGVSKGVKERALECFQKGGMNGDVAKLKGLFDNWNEKNCAIVCRIVRNNVWSDDVERQIKDLNVGFSGDMVKIVLEGLASEPAKALIFFRWLEECGMFKHNGGTYNAMARVLGREDSIDRFWKLVGDLRSAGFEMEVETFAKVLGRFCKKRMVKDAVELYELAMAGANKPSVECCVFLLRKVAAGKELDMDLFSRVLKVFTGSGNALTDSMADAVLKSLTSVGRTGKWNKVLKEMEDCGFVAGGNLRSKIAFRLSAAGNIEQAHEFVYRVEASGCNANRKTWESLIEGHCVAGNIDKAFDSFKEMVDKEGITSAGYTFDVLMNSLCQMNRAIDACKILCRLVNEKQLKPWHSTYKLLVTKLLDQGGFADALPILGLMRNHGFPPFTDPFIEHLSKSGSYDDAVLFLRAMTSKRFPSTSVFLRMLEAFFKHGRHEEAHNFLSKCPRFIRNDVDVLNLLYSMKSKEAASSAILAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B162</accession>
    <name>V7B162_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_009G186800g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B162"/>
    <dbReference type="SMR" id="V7B162"/>
    <dbReference type="STRING" id="3885.V7B162"/>
    <dbReference type="Gramene" id="ESW10171">
        <property type="protein sequence ID" value="ESW10171"/>
        <property type="gene ID" value="PHAVU_009G186800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QU4Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GSCKVVQ"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051058">
        <property type="entry name" value="GDSL_Est/Lipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648">
        <property type="entry name" value="GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45648:SF8">
        <property type="entry name" value="ZINC FINGER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753959" description="GDSL esterase/lipase" evidence="4">
        <location>
            <begin position="25"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW10171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="7">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="367" mass="40802" checksum="9AE1A7A948FC90B2" modified="2014-02-19" version="1">MKFHVSLFVIISIILGIKLEGCRCKVVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVADIIGDSMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSRIGKDEAEKIFQEARYVVALGSNDFINNYLMPVYSDSWNYNDETFVDYLMGTLREQLKQLHGLGARQLMVFGLGPMGCIPLQRVLSTSGECQDRTNKLAIRFNKGGSKLIDELEKQLPNSSFRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELIAKELIKKFGFITVHQTNPPSPSPTLAPSSNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1G7</accession>
    <name>V7B1G7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_009G231100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1G7"/>
    <dbReference type="STRING" id="3885.V7B1G7"/>
    <dbReference type="Gramene" id="ESW10708">
        <property type="protein sequence ID" value="ESW10708"/>
        <property type="gene ID" value="PHAVU_009G231100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S1A3">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HDIRDEN"/>
    <dbReference type="OrthoDB" id="1932113at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35277:SF7">
        <property type="entry name" value="BNAC03G13190D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35277">
        <property type="entry name" value="OS09G0363700 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="179"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="180"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW10708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="26052" checksum="E0558B6ADB14EA44" modified="2014-02-19" version="1">MTVNEKFPSLSLSLSLSLSLSLHLLRFGRFRFSNKLFHKTTSTLSQQAHIHFSVNLKTSNLKPIMPTNSFSVNEERAKHYSEHENRESHGLSGGIDEKTSMDDVRAPNVFERAKEEFQALSEVLLHKKKIPTSDIRDENQMAESIKHYQEAPSSPSERKAKAANIFVKAKEEIKGMIHHEKSKHHHKETHGKNDDISDNTPTSEVKGPNVFERVKEEFEAVFQAMHPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="58" xmlns="https://uniprot.org/uniprot">
    <accession>V7B1M8</accession>
    <name>V7B1M8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="19">Pathogenesis-related homeodomain protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_009G236200g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11 13">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PHD-associated homeobox family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002296">
        <property type="protein sequence ID" value="ESW10768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B1M8"/>
    <dbReference type="SMR" id="V7B1M8"/>
    <dbReference type="STRING" id="3885.V7B1M8"/>
    <dbReference type="Gramene" id="ESW10768">
        <property type="protein sequence ID" value="ESW10768"/>
        <property type="gene ID" value="PHAVU_009G236200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4299">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="SHMKHES"/>
    <dbReference type="OrthoDB" id="1903104at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 9"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003682">
        <property type="term" value="F:chromatin binding"/>
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        <property type="project" value="TreeGrafter"/>
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    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045814">
        <property type="term" value="P:negative regulation of gene expression, epigenetic"/>
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        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010557">
        <property type="term" value="P:positive regulation of macromolecule biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd15504">
        <property type="entry name" value="PHD_PRHA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000437">
        <property type="entry name" value="pathogenesis-related homeodomain protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000270">
        <property type="entry name" value="pathogenesis-related homeodomain protein-like"/>
        <property type="match status" value="1"/>
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    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
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        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045876">
        <property type="entry name" value="PRHA-like_PHD-finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019786">
        <property type="entry name" value="Zinc_finger_PHD-type_CS"/>
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    <dbReference type="InterPro" id="IPR011011">
        <property type="entry name" value="Znf_FYVE_PHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001965">
        <property type="entry name" value="Znf_PHD"/>
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    <dbReference type="InterPro" id="IPR019787">
        <property type="entry name" value="Znf_PHD-finger"/>
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    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12628:SF10">
        <property type="entry name" value="HOMEOBOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12628">
        <property type="entry name" value="POLYCOMB-LIKE TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00628">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00249">
        <property type="entry name" value="PHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57903">
        <property type="entry name" value="FYVE/PHD zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01359">
        <property type="entry name" value="ZF_PHD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50016">
        <property type="entry name" value="ZF_PHD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 11 13" id="KW-0371">Homeobox</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11 13" id="KW-0539">Nucleus</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="PHD-type" evidence="15">
        <location>
            <begin position="233"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="Homeobox" evidence="16">
        <location>
            <begin position="488"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="11">
        <location>
            <begin position="490"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="25"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="329"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="429"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="465"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="549"/>
            <end position="637"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="25"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="14">
        <location>
            <begin position="35"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="14">
        <location>
            <begin position="91"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="111"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="14">
        <location>
            <begin position="124"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="135"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="14">
        <location>
            <begin position="331"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="364"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="466"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="556"/>
            <end position="570"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW10768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="19">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="712" mass="81544" checksum="2F86D33C51EAFFE5" modified="2014-02-19" version="1">MRDAENLNKKGSIKSCYSKEQIKSKLLSSKLKTSSTKHRKKEHKEKSRSHKYRVGTNRSKKRVVDSSIKAPLEDSSNKRVIIRKTLHKTDGNSSRMVSSTRLQGRKNPHSSRKEGNGVDEEAKIKKRKSSKKKNSQRDNMDHDDASRLKRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELLRAKKQILNCKLSIRDVIRQLDSLSSVGSIEDSVIAPDGSVYHEHIFCANCKLHEAFPDNDIILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCKFCECKIEIIESTNAHLGTQFSLDSSWQDVFKEEAAMPDGDIALLNPEEEWPSDDPEDDDYNPERKEDSHSINTEGADENSSNDSTSSSSLWPLNGECPPVDEDLSHEYYSVNSFIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPGKRKRREKESDAVNTLMTLHESENKYHNNESNDRIREGSSGLQIRRSCFRIPLDAVEKLRQVFAENELPPRSVKEGLSKELGLDPEKVSKWFKNARYLALKTRKYESEEQLQSSTSQISKDSTSPNMQKDELLEPEVPKITLMHSQKDGQNITGQEKNKLSNSLLKKRKKKPSPPLSRENSNKDSMEMSDDVNLKKLLKERKRRVNFTYEGDSEVAELEFERLSKVKSKVDSMKQKLSEVQYCRAKGSNEPSIIYVPTAQLREKVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7B209</accession>
    <name>V7B209_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AAA+ ATPase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_008G072100g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the disease resistance NB-LRR family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW11942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW11942">
        <property type="protein sequence ID" value="ESW11942"/>
        <property type="gene ID" value="PHAVU_008G072100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1075">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4658">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NCHEMIT"/>
    <dbReference type="OrthoDB" id="1747797at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.430">
        <property type="entry name" value="Helical domain of apoptotic protease-activating factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042197">
        <property type="entry name" value="Apaf_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057135">
        <property type="entry name" value="At4g27190-like_LRR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002182">
        <property type="entry name" value="NB-ARC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050905">
        <property type="entry name" value="Plant_NBS-LRR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463:SF196">
        <property type="entry name" value="NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33463">
        <property type="entry name" value="NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF23247">
        <property type="entry name" value="LRR_RPS2"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00931">
        <property type="entry name" value="NB-ARC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00364">
        <property type="entry name" value="DISEASERSIST"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0611">Plant defense</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA+ ATPase" evidence="7">
        <location>
            <begin position="173"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="2417"/>
            <end position="2560"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="30"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="2417"/>
            <end position="2490"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="2497"/>
            <end position="2509"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="2516"/>
            <end position="2540"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="2548"/>
            <end position="2560"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW11942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="2787" mass="319767" checksum="291C2EF359B0E5B2" modified="2014-02-19" version="1">METVISTTTESALQIGGGLVKRHVGYFYNYNEKLQELNNYIVMLNDARQRVQNEAKKAEMNAEEIENDVHNWLKHVDEKIKKYVSFIDDERHSKISSIGFFPNNLQLRYRLGRKATKIIEEIKADEHFKKKFDRVSYRVFPTVDSALANTGYESFGSRNKTFEMIMKTLEDSKTNIVGVYGVGGVGKTTLVKAIAKKVQEKKLFNMVVMANITRNPDIKNIQGQIAEMLGMRMEEESETLRADLIRKRLQNEKENTLIILDDLWDGLDLNKLGIPSSYDVDDNQWDVKDISDFGYNKREKEDMSIDSSKMKKDKLYANSNKVKKEKAPMDHKRCKILLTSRSKEVICNQMDVQDQSTFLVGVIDEKEAETLLKKVAGIHSTNSMFDKKVTEIAKMCAGLPIALVSIGRALKNKSAFVWEDVYRQIKRQSFTEERESIEFSVKLSYDHLKNDELKCLFLQCARMGNDALIMDLVKFCIGSGLLQGVFTIREARHRVNALIEVLKDSSLLVESYSTDRFNMHDIVRNVALSISSKEKHVLFMKNGIVDEWPNKDELKRYTAIFLQYCDFNDELPDSIDCPGLQVLHIDSKDDSIKIPDNFFKDMIELRVLILTGVNLSLLPSSLKCLTKLRMLSLERCSLEKKLSYIGALKKLRILTLSGSNIVRLPLEFGQLDKLQLFDLSNCPKLRIIRPNIISRMKVLEEFYMRDYSIPRKPAKNIKSLNATLSELMQLNWLRTLDIHIPRVANFPQNMFFDKLDSYKIVIGDLNMLSQLEFKVLDKYEAGKFLALNLRGHCINIHSEKWIKMLFKNVEHLLLGDLNDVDDVLYEFNVEGFANLKHMYVVNSFGIQFIIKSVERFHPLLAFPKLESMCLYKLDNLEKICDNKLTKDSFRRLKIIKIKTCDQLKNIFSFSMIECFGMVERIEACDCNSLKEIVSIEGESSNDNAIEADKVEFPQLRFLTLQSLPSFCCLYTNNKTPFISQSFEDQVPNKELKQITTVSGQYNNGFLSLFNEKVSIPKLEWLELSSINIRQIWNDQCFHSFQNLLKLNVSDCENLKYLLSFPTAGSLVNLQSLFVSGCELMEDIFSTTDATVRRVIQFNLTVQVICCLISLIANEYFQLQQNIDIFPKLKEMEINCMKKLNTIWQPHMGFNSFHCLDSLIVRECDKLVTIFPNYIGKRFQSLQSLVITDCTSVETIFDFRNIPETCGRSDLNLHDVLLKRLPNLVHIWKLDTDEVLNFNNLQSIVVYKSKMLEYLFPLSVAKGLEKLETLDVSNCWEIKEIVACNNRSNEEAFRFPQLHTLSLQHLFELRSFYRGTHSLEWPLLRKLSLLVCSNLEETTNSQMNRILLATEKVIHNLEYMSISWKEAEWLQLYIVSVHRMHRLKSLVLSGLKNTEIVFWLLNRLPNLESLTLMNCLVKEFWASTNPVTDAKIGVVVQLKELMFNNVWFLQNIGFKHCPLLQRVERLVVSGCGKLKSLMPHMASFSYLTYLEVTDCLGLLNLMTSSTAKSLVQLVTLKVSFCESMEIIVQQEEQQVIEFRQLKAIELVSLESLTCFCSSKKCLKFPSLENLLVTDCPKMKTFCEKQSAPSLRKVHVAAGEKDTWYWEGNLNATLRKISTGQVSYEDSKELTLTEDSHQNIWSKKAVFPYKYFGNLKKLVVEDIKKKESVIPSKILACLKSLEELEVYGCEKAKVVFDIHDIEMNKTNGMVSRLKKLDLDELPNLTRVWNKNPQGIVSFPYLQEVIVSDCSGITTLFPSPLVRNLVNLQKLEILRCKSLVEIVGKEDETELGTAEMFHFPYLSFFILYKLPKLSCFYPGKHHLECPILETLDVSYCPMLKLFTSKFSDKEAVRESEVSAPNTISQLQQPLFSVEKVVPKLKNLTLNEENIILLRDGHGPPHLLCNLNKLDLSYENVDRKEKTLPFDLLKVPSLQRLEVRHCFGLKEIFPSQKLEVHDGKLPELKRLTLVKLHDLESIGLEHPWVKPFSVTLKKLTVRLCDKIHYLFTFSTAESLVQLEFLCIEKCDLIREIVKKEDEDASAEIKFRRLTTLELVSLPKLASFYSGKTTLQFSRLKTVTVDECPNMITFSEGTINAPMFQGIETSIYYSNLTFLNDLNTTVQWLFVKKEDPKMKEFWHDKAALQDSYFQSVKTLVVENIIENFKISSGILRVLRSLEELQVHSCKAVQVIFNIDETMEKNGIVSPLKKLTLDKLPYLKRVWSKDPQGMINFPNLQEVSVRDCKQLETLFHSSLAKNLLKLGTLDIRNCAELVSIVRKEDAMEEEATARFEFPCLSSLLLYKLPQLSCFYPGKHHLKCPILESLNVSYCPKLKLFTFEFLDSDTKEITESKVSYPDTTENEVSSPDTNRQPLFSVEKVVPKLKKLALNEENIKLLRNKYFPEDLFDKLNYLELCFEDCDNDDDKNDGDSDDGDSVNDNSEDGESEDGGSNDDDSDDGDSVADDSDDSDSDDDGDSVANDSDDSVSDDDSDSDDDGDSKYGDSEDGDSEDSDSDDGDNKDSDSDDGDSEDGNNVDDDSDNDDDNEDGDSKDGDSKDDDNEDDYSEEDTLPFDFLHKVHNLEHLVVRCLRIKKIFPAQEHQVKERIPTTLKSLTLGNLEELKSIGLEHPPYSEKLEVLNLERCPQLQNLVPNSVSFISLKQLCVKLCQEMTYLFKFSTAKSLVQLESLIVMNCKSLKEIAEKEDNDDEIIFGKLTTLTLDSLPRLEGFYLGKATLQFSCLKEMKIAKCRKMDKFSIGVAKAPMIPHVNFQNNPSLIHDDDLNNIVNRLFTKRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7B364</accession>
    <name>V7B364_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_008G077200g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the protein kinase superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B364"/>
    <dbReference type="SMR" id="V7B364"/>
    <dbReference type="STRING" id="3885.V7B364"/>
    <dbReference type="Gramene" id="ESW12010">
        <property type="protein sequence ID" value="ESW12010"/>
        <property type="gene ID" value="PHAVU_008G077200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1187">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PSVHKMY"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006952">
        <property type="term" value="P:defense response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000258">
        <property type="entry name" value="Probable serine/threonine-protein kinase PBL8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000228">
        <property type="entry name" value="Serine/threonine-protein kinase BIK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050823">
        <property type="entry name" value="Plant_Ser_Thr_Prot_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45621">
        <property type="entry name" value="OS01G0588500 PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0611">Plant defense</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="13">
        <location>
            <begin position="89"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="23"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="411"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW12010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="434" mass="47582" checksum="A6D5CDC562D5BA50" modified="2014-02-19" version="1">MGNCGTREESAVVSNAQVQQLHHAASLGASARSQNAGSEKKHGHGHRHNLSECASDLSEACSTPRGNNNNSTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAIGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSVSAGPFAMNKISDYRMRQRFSNNVGPGATCRSPNPNCSPGAPAALRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7B4F0</accession>
    <name>V7B4F0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">B-like cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_008G132400g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Interacts with the CDC2 protein kinase to form a serine/threonine kinase holoenzyme complex also known as maturation promoting factor (MPF). The cyclin subunit imparts substrate specificity to the complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclin family. Cyclin C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B4F0"/>
    <dbReference type="STRING" id="3885.V7B4F0"/>
    <dbReference type="Gramene" id="ESW12669">
        <property type="protein sequence ID" value="ESW12669"/>
        <property type="gene ID" value="PHAVU_008G132400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0794">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TAVAYMR"/>
    <dbReference type="OrthoDB" id="10266018at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016538">
        <property type="term" value="F:cyclin-dependent protein serine/threonine kinase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006357">
        <property type="term" value="P:regulation of transcription by RNA polymerase II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.472.10:FF:000058">
        <property type="entry name" value="cyclin-C1-2-like isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013763">
        <property type="entry name" value="Cyclin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043198">
        <property type="entry name" value="Cyclin/Ssn8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10026">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028758">
        <property type="entry name" value="Cyclin, C/H/G types"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00385">
        <property type="entry name" value="CYCLIN"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 7" id="KW-0195">Cyclin</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin-like" evidence="8">
        <location>
            <begin position="46"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclin-like" evidence="8">
        <location>
            <begin position="149"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW12669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="226" mass="26498" checksum="C0CAB3A1FC40DAB6" modified="2014-02-19" version="1">MAANFWTSSHYKHLLDQEDVDMVNALDKEKGITLEDFKLIKMNMTNYILKLAQQVKVRQRVVATAVTYMRRVYTKKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADEKYRYEIKDILEMEMKILEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLRDKDTTAWFEELRVDMNVVSVPRYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7B5X7</accession>
    <name>V7B5X7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Beta-glucosidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G097100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B5X7"/>
    <dbReference type="SMR" id="V7B5X7"/>
    <dbReference type="STRING" id="3885.V7B5X7"/>
    <dbReference type="Gramene" id="ESW12253">
        <property type="protein sequence ID" value="ESW12253"/>
        <property type="gene ID" value="PHAVU_008G097100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0626">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="DFMYGWI"/>
    <dbReference type="OrthoDB" id="65569at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008422">
        <property type="term" value="F:beta-glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.80:FF:000069">
        <property type="entry name" value="Beta-glucosidase 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.80">
        <property type="entry name" value="Glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="GH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033132">
        <property type="entry name" value="GH_1_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353:SF208">
        <property type="entry name" value="GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="GLYCOSYL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="(Trans)glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00653">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004753939" description="Beta-glucosidase" evidence="6">
        <location>
            <begin position="22"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW12253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="514" mass="58052" checksum="65756240D64A8D58" modified="2014-02-19" version="1">MMKVLAVIELVLLIVHHCAHALSRDQFPPDFVFGASTSAYQIEGAANEDGRKPSTWDTFSHSGNGKMYAGDGDVACDHYHKYKEDVKLMANMGLEGYRFSISWSRLIPDGRGPVNPKGLLFYSNLINELISNGIEAHVTLNHFDLPQALEDEYGGWVSRRVVKDFTKYAEVCFREFGDRVKYWTTLNEANVNVVLGYDLGVMQPQRCSPSPLTNCSRGNSSTEPYLAAHHMLLAHGSAARVYREKYQGMQHGLIGFNLLLLGFLPQTNSTEDIMAVQRVQDFSIGCFMNPFIFGDYPDIMKKNAGSRLPSFTQKESNLVKGSIDFLGINFYFSLYVKDSPGNLQKENRDCLEDVAAKFQLYLPNDITIPEVPITPNVFLRTLDSLRSTYGNIPIFIQENGQQTAHNSSLNDWSRVNYLHAYIGSIVDALRSGLNVKGYFVWSFMDTFEIVGGYELSYGLYYVDMNDTNLRRQPKLSAEWYSNFLKGKLMDPKITKETEKNASVLSHNPWLHSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7B6H1</accession>
    <name>V7B6H1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_008G083200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the RING-type zinc finger family. ATL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B6H1"/>
    <dbReference type="SMR" id="V7B6H1"/>
    <dbReference type="STRING" id="3885.V7B6H1"/>
    <dbReference type="Gramene" id="ESW12081">
        <property type="protein sequence ID" value="ESW12081"/>
        <property type="gene ID" value="PHAVU_008G083200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0800">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KMTIVIL"/>
    <dbReference type="OrthoDB" id="8062037at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16461">
        <property type="entry name" value="RING-H2_EL5-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044602">
        <property type="entry name" value="ATL10/ATL72-79-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46905">
        <property type="entry name" value="RING-H2 FINGER PROTEIN ATL78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46905:SF21">
        <property type="entry name" value="RING-TYPE E3 UBIQUITIN TRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13639">
        <property type="entry name" value="zf-RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01197">
        <property type="entry name" value="FANCL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00184">
        <property type="entry name" value="RING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0833">Ubl conjugation pathway</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="12" id="KW-0863">Zinc-finger</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="RING-type" evidence="15">
        <location>
            <begin position="108"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="156"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW12081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="178" mass="19544" checksum="08A9BE45685D7AE8" modified="2014-02-19" version="1">MTQRRFLETELSMPPSYGNNTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETAEQEAARLAGTGLKRRQLSRIPVAVYGASGETVPATECPICLGEFEKGDRVRMLPKCNHGFHVHCIDTWLLSHSSCPNCRHSLLEKPATPESGSRRRSDVVVVVEPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7B720</accession>
    <name>V7B720_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF3741 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_008G098200g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW12266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B720"/>
    <dbReference type="Gramene" id="ESW12266">
        <property type="protein sequence ID" value="ESW12266"/>
        <property type="gene ID" value="PHAVU_008G098200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RYYY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QANHHQV"/>
    <dbReference type="OrthoDB" id="1670627at2759"/>
    <dbReference type="PhylomeDB" id="V7B720"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032795">
        <property type="entry name" value="DUF3741-assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35499:SF4">
        <property type="entry name" value="ALC-INTERACTING PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35499">
        <property type="entry name" value="OS05G0128300 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14383">
        <property type="entry name" value="VARLMGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3741" evidence="2">
        <location>
            <begin position="60"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="225"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="235"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="260"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW12266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="405" mass="46270" checksum="957404421A2CB123" modified="2014-02-19" version="1">MAEPSHAKPGCFSDFFHLLFCAENGNRSLMQPNSNPITKPYASEVVHVHNKDAMLNATKPGVVARLMGLDSLPSTNLVSNTNTLDSVPRSRSVNFVDYLLKFDTSQANHHQVKTSASFREVPAPFHHKSKNHDHVVFYWDSGSEDHKVESLSRIQEMGLEESRQRRKQGIKNKEIAGVTKERNLTKRKKISKFENEPRVVPFKHGSKVRNHNEAKVWAPVSACSKSCGNRRKGGSSPSGLRTTPTLPNKQKKVPSEPKRSKNTRKQQSKKKIETECSSENFSPISVLDDNDFSFLYGPDFSDYTSHLKPKTKWEFSELLLDDNVGDRASKDNECSYSDINHKKEYLSELTKELCKFTENDLRELDFTRKSMCEGENYEEICLEFEHKIFDILLHQVVNELVELSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7B9J1</accession>
    <name>V7B9J1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Pentatricopeptide repeat-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_008G290100g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7B9J1"/>
    <dbReference type="SMR" id="V7B9J1"/>
    <dbReference type="STRING" id="3885.V7B9J1"/>
    <dbReference type="Gramene" id="ESW14542">
        <property type="protein sequence ID" value="ESW14542"/>
        <property type="gene ID" value="PHAVU_008G290100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CCIADML"/>
    <dbReference type="OrthoDB" id="756178at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000496">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000645">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000573">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF452">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="3" id="KW-0934">Plastid</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <feature type="repeat" description="PPR" evidence="6">
        <location>
            <begin position="162"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="6">
        <location>
            <begin position="364"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="6">
        <location>
            <begin position="466"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="6">
        <location>
            <begin position="567"/>
            <end position="601"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW14542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="9">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="802" mass="89172" checksum="8921764E5EA5660E" modified="2014-02-19" version="1">MASPVVPVPVPVTDPVVARNPCGGVTIRTRLSKLCQQGQPQLARHLLDSLPRASTAVWNTVIIGFICNKMPLEALQLYAEMKWRRNTASDGYTFSSTMKACALTQNLIAGKALHCHFLRSQSNSRVVYNSLLNMYSACLPPFATQPQHDYVLKLFDVMRKRNVVAWNTLISWFVKTHRHLHALRAFATLVKASLTPTPVTFVNVFPAVLHPTTALMLYGLLLKHGADYVNHVFAVSSAILMFAELGCLDYARVVFDRCSGKNTEVWNTMIGGYVQNNCPLQGIDVFVRALESEEAVCDDVTFLSVISAVSQLQQIKLAQQIHAFVLKSLAVTPIIVVNAIIVMYSRCSSVDTSFKVFEKMSERDGVSWNTIITSFVQNGLDEEALMLVCEMQKQRFTIDSVTVTALLSAASNMRDSYIGRQTHAYLIRHGIQFEGMESYLIDMYAKSGLITTSELLFEQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREALMRKVTPNAVTLASILPSCSSMGSTAIARQLHGFSIRQLLDGNVYVGTALVDAYSKLGAISYAENVFIRTPAKNSVTYTTMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSACSYSGLVEEGLHIFESMDKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVERLGEEGDAVEIWGSILGACKNHGYFELGKVVAEKLLKMGMEKRIAGYHVLLSNIYAEEGEWENVDRVRNQMKEKGLQKEMACSWVEIAGRVNYFVARDEKHPLSGEIYYILDKLTRDMMDVGYKPGYSSNLNRILESSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7BA64</accession>
    <name>V7BA64_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Anaphase-promoting complex subunit 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_008G222900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the APC1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW13748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="SMR" id="V7BA64"/>
    <dbReference type="STRING" id="3885.V7BA64"/>
    <dbReference type="Gramene" id="ESW13748">
        <property type="protein sequence ID" value="ESW13748"/>
        <property type="gene ID" value="PHAVU_008G222900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1858">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MQPPDSR"/>
    <dbReference type="OrthoDB" id="26401at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005680">
        <property type="term" value="C:anaphase-promoting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0060090">
        <property type="term" value="F:molecular adaptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031145">
        <property type="term" value="P:anaphase-promoting complex-dependent catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007091">
        <property type="term" value="P:metaphase/anaphase transition of mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070979">
        <property type="term" value="P:protein K11-linked ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000211">
        <property type="entry name" value="Anaphase-promoting complex subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000338">
        <property type="entry name" value="Anaphase-promoting complex subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024990">
        <property type="entry name" value="Apc1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR048971">
        <property type="entry name" value="Apc1_3rd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041221">
        <property type="entry name" value="APC1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046794">
        <property type="entry name" value="Apc1_MidN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR049255">
        <property type="entry name" value="Apc1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002015">
        <property type="entry name" value="Proteasome/cyclosome_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12827:SF3">
        <property type="entry name" value="ANAPHASE-PROMOTING COMPLEX SUBUNIT 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12827">
        <property type="entry name" value="MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12859">
        <property type="entry name" value="ANAPC1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF21282">
        <property type="entry name" value="APC1_3rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18122">
        <property type="entry name" value="APC1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20518">
        <property type="entry name" value="Apc1_MidN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01851">
        <property type="entry name" value="PC_rep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-0498">Mitosis</keyword>
    <keyword evidence="9" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="8" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="Anaphase-promoting complex subunit 1 N-terminal" evidence="11">
        <location>
            <begin position="33"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="Anaphase-promoting complex subunit 1 N-terminal" evidence="11">
        <location>
            <begin position="288"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="domain" description="Anaphase-promoting complex subunit 1 middle" evidence="13">
        <location>
            <begin position="517"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="domain" description="Anaphase-promoting complex subunit 1 beta-sandwich" evidence="14">
        <location>
            <begin position="1455"/>
            <end position="1518"/>
        </location>
    </feature>
    <feature type="domain" description="Anaphase-promoting complex subunit 1 C-terminal" evidence="12">
        <location>
            <begin position="1595"/>
            <end position="1760"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF18122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF20518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF21282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW13748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1805" mass="201081" checksum="329C8CF6150BE603" modified="2014-02-19" version="1">MSIGKRCLTVLGEFKPFGLIAEALDGKPPGTVTDKYDYFLFDPEIARDRDAEDECNDVSLAPSSCGDHELFIRGNRIIWSTGARVFKRFTLPSDIVKVCWCRLSHIAEALLCILQIDRLTIYNTSGEVVSLPLPRTITSIWPLPFGLLLQQDVEANILSRVPFSSTSPLLSTRDMLLSASNHIQRGEGTSVSSHLILMDPLDELRPTFIEERGKLNMMKEYDEKTIWTSDQVPLMASYNKGKMQHSLWVAEIVNSNVDEESAGSSLPIDPMSVLPKHLSFRKIWQGKGAQTAACKVFMATDDDATPVVCFFHQEQRKLLILSLQIVEINNEVVFDVKPDMGWNIYAIAASPVTVTRPRVKVGLLPYSDIMVLAPENVLLLYSGKQCLCKYVLPCLNKDKILHNLEFSEESLLPNDLKITGLADAVEGRVNVIVNNRQIFRCALRESPSSALANDCITALAEGLYSSFYRHLLGLFWKDDDPAHSSEAEPIVDSEWNSFCHVIMQICRKSKTICQKGSDSVPHSAWDFLISSQFHYNFCKVNSILGIPCAVSLDQQEANSDRSFVDDPQSSEKPFYTDLLRESMESLHGLYESLKLDNLRKRDLELLAVLLCNIAEFLVEENYLDHYIRDFPGLSKKFLKSGMSISAKICPSLFRWFENCLQYGCHYANMNDIPALVCKEGSSVVSIARKVVCFYSILSGAKLLGNKLSTGVYCNITMGSHSSKEELTVLAMVGERFGLQQLDSLPSGVSLPLRHALDRCRDSPPNDWPAAAYVLLGRQDLAMSTLARECKYRGIETPTNVNVISMSTPYVLNLHPVTISSTISDAIGLEGAKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPAAIQTSINHSVSDQDLQQAQLWHLAQRTTSLPLGRGAFTLATIYTLLTEAFTVPKLVLAGRLPAQQNATVNLDPNIRNIQELRSWPEFHNAVAAGLRLAPLQGRMSRTWILYNRPEEPNSVHAGLLLALGLHGFLRVLAVTDIYQYFSQEHESTTVGLMLGLAASYGGTMHPAISKTLYFHIPVRHPSSYPELEVPTLLQSAALMSLGILYEGSAHPQTMHVLLGEIGRRSGGDNVLEREGHAVSAGFALGLVALGRGEDALGFIDTFVNRLFLYIGDKVHNERPHFSTVSMDECRGSAQMMDGTTVNIDVTAPGAIIAIALMFMKTESEAIVSRLSIPNTFFDLQYVRPDFIMLRVIARNLIMWSRVHPSKDWVWSQIPEIVRCAIEGIGGDDNDIDDMDAEAFTQAYVNIIAGACISLGLVFAGTRNENAQELLYEFAIYFLNEIKPVSPTSGKVFPKGLSHHIDRGTLETCLHLIVLSLSVVMAGSGHLQTFRLLRFLRSRNCADGQSSYGIQMAVSLATGFLFLGGGMRTFSTTNHSIAALLITLYPRLPTGPNDNRCHLQAFRHLYVLATEARWIQTVDVDTGLPVYAPLEVTVRETEHYAESNFCEVTPCLLPERSILKRIRVCGPRYWPQVIDFTPEDKPWWNFGDKNNPFNSGILFIKRKVGACSYVDDPIGCQSLLSRAMHKVFGLTSLKASDTIRDIRNGSDSITVDQLVGTFSSDPSLIAFAQLCCDPSWYNRSDVDFKEFCLQVLFECVSKDRPALLQVYLSLYTTVESMAEQVTNGAIVFGDSLSISGFKLALTYIEALMNGKLSAPKGGIVQSTFVGSLRKQVEELLNCSQELKDDFHNYLKLGKWPDGESQDKRSILLSWFLQWFDVPASSVIRTAIDRVKPKLMSSSSVPLLRLFFPRTHIHVISEIDRCFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="37" xmlns="https://uniprot.org/uniprot">
    <accession>V7BBP0</accession>
    <name>V7BBP0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_007G056000g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="2" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BBP0"/>
    <dbReference type="STRING" id="3885.V7BBP0"/>
    <dbReference type="Gramene" id="ESW15234">
        <property type="protein sequence ID" value="ESW15234"/>
        <property type="gene ID" value="PHAVU_007G056000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW15236">
        <property type="protein sequence ID" value="ESW15236"/>
        <property type="gene ID" value="PHAVU_007G056000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3109">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1065058at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="entry name" value="HAD superfamily/HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010237">
        <property type="entry name" value="Pyr-5-nucltdase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01993">
        <property type="entry name" value="Pyr-5-nucltdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12725">
        <property type="entry name" value="HALOACID DEHALOGENASE-LIKE HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12725:SF81">
        <property type="entry name" value="OS03G0701200 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00702">
        <property type="entry name" value="Hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01132">
        <property type="entry name" value="C1.5.3:_5'-Nucleotidase_Like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01129">
        <property type="entry name" value="C1.5:_HAD__Beta-PGM__Phosphata"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00003">
        <property type="entry name" value="Haloacid_Dehalogenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="HAD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW15234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="321" mass="36087" checksum="D3123134CE87BB4E" modified="2014-02-19" version="1">MRLSCGPRVYSASKFETVTQRSSHHQQCLSNPRAPRHLLSINSPPFPVFKARFLLFISHTILLLSSSSSSPTMGINSLVSPFDAIIFDLDDTLYPSTTGIDRCVKRNIELFLIEKCGFSESKAAHLRVELFKTYGSTLAGLRALGYDITAEEYHSFVHGRLPYDSIKPDVQLRNLLCTIKQRKIVFTNSDRIHAMRALDRLGISDCFEQVICFETINPNLPNSTRPDEFPVLLKPSLDAFRIALDAANVEPRRTLFLDDSVRNIAAGREMGLQTVLVGKTVKSKEANYAVEFVNNVAQAIPEIWANKMDDEDETMTRTKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7BCB2</accession>
    <name>V7BCB2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_008G253600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AP2/ERF transcription factor family. AP2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002295">
        <property type="protein sequence ID" value="ESW14106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BCB2"/>
    <dbReference type="SMR" id="V7BCB2"/>
    <dbReference type="STRING" id="3885.V7BCB2"/>
    <dbReference type="Gramene" id="ESW14106">
        <property type="protein sequence ID" value="ESW14106"/>
        <property type="gene ID" value="PHAVU_008G253600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QUXV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YINWPGP"/>
    <dbReference type="OrthoDB" id="207175at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 8"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000002">
        <property type="entry name" value="AP2-like ethylene-responsive transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000004">
        <property type="entry name" value="AP2-like ethylene-responsive transcription factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32467">
        <property type="entry name" value="AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32467:SF122">
        <property type="entry name" value="AP2-TYPE TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="10">
        <location>
            <begin position="36"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="AP2/ERF" evidence="10">
        <location>
            <begin position="138"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="237"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="8"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="247"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00037973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW14106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="302" mass="34413" checksum="D58C78DB0652ED11" modified="2014-02-19" version="1">MAKRSQKALKNTDTNSTAKRTRKTVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLTNYEEMLKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGANAVTNFDVSRYINWPGPKSEEENQNVPVNENVNSNAEIELGFVSHEHGSKSDEITTEDAAQSSESNPSRRTFPEDIQTIFESQGPDIYTENDDIIFGDLGSFGASIFHYELDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7BEK9</accession>
    <name>V7BEK9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">Subtilisin-like protease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_007G064100g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for arbuscular mycorrhiza (AM) development during AM symbiosis with AM fungi (e.g. Glomeromycota intraradices).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
            <location evidence="2">Extracellular space</location>
            <location evidence="2">Apoplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW15333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BEK9"/>
    <dbReference type="SMR" id="V7BEK9"/>
    <dbReference type="MEROPS" id="S08.A25"/>
    <dbReference type="Gramene" id="ESW15333">
        <property type="protein sequence ID" value="ESW15333"/>
        <property type="gene ID" value="PHAVU_007G064100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502R0K0">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HSNRTCK"/>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="PhylomeDB" id="V7BEK9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048046">
        <property type="term" value="C:apoplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048731">
        <property type="term" value="P:system development"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.50.30.30:FF:000005">
        <property type="entry name" value="subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.80:FF:000003">
        <property type="entry name" value="Subtilisin-like protease SBT1.9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003137">
        <property type="entry name" value="PA_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02225">
        <property type="entry name" value="PA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0052">Apoplast</keyword>
    <keyword evidence="10" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 12" id="KW-0645">Protease</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="9 12" id="KW-0720">Serine protease</keyword>
    <keyword evidence="7 13" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754457" description="Subtilisin-like protease" evidence="13">
        <location>
            <begin position="29"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="16">
        <location>
            <begin position="34"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="14">
        <location>
            <begin position="145"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="domain" description="PA" evidence="15">
        <location>
            <begin position="383"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="17">
        <location>
            <begin position="674"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11 12">
        <location>
            <position position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW15333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="20">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="778" mass="83906" checksum="81533E8EA934CA27" modified="2014-02-19" version="1">MRPITPSEKMSLIVTIFLLLCILSSANAEFAKKTYIIQMDKYAKPDTFSSHIEWYTSKVKSILSISVEAEMEKEERIIYTYQTAFHGMAAKLSREEAERLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPAQSTKVWSETLANYDVTVGVLDTGIWPESESFNDTGMRSVPSHWKGACETGRGFAKYHCNKKIVGARMFYHGYEAATGKIDEKTEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDRAVADGVDVLSISLGGGVSSYYRDSLSVAAFGAMEKGVLVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPAEVSLGTGRKITGTSLYKGRSVLSVKKQYPLVYMGNINSSIPDPRSLCLEGTLDRRMVSGKIVICDRGISPRVQKGQVVKNAGGVGMILINTAANGEELVADCHLLPAVAVGEKEGKELKHYVLTSKKATATLGFMATRLGVRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGAIGPSSLPTDHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTIKPLRDASSADASTPYDHGAGHINPNRALDPGLVYDIQPQDYFEFLCTQKLTPSELGVFAKYSNRTCRHSLASPGDLNYPAISVVFSQINSSSVLTVHRTATNVGPAVSKYHVVVSPFKGASVKVEPETLSFTKKYQKLSYKVTFTTQSRQTEPEFGGLVWKDGVHKVRSPIVLTYLTPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7BGS6</accession>
    <name>V7BGS6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_007G129100g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BGS6"/>
    <dbReference type="Gramene" id="ESW16098">
        <property type="protein sequence ID" value="ESW16098"/>
        <property type="gene ID" value="PHAVU_007G129100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S77P">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="673645at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040381">
        <property type="entry name" value="At4g14450-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33912">
        <property type="entry name" value="OS01G0939400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33912:SF2">
        <property type="entry name" value="PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW16098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="168" mass="18970" checksum="EBDEB93A852907CF" modified="2014-02-19" version="1">MDGKLRKVNSEALITGSEGGRWTPLSSAFHFPTCVCVCCTLFLYYIYKKNHHHFVSIFTTITLLFSSLLFHNHIPMSNPQTNNNRHQPSRLQRRAPSSLQISRSLDWNVAIPLLSPLASSPPPLELKPPQEPPQREAEKVSVSFKKWQHPAAPFCYEPAAIVPPFVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJ57</accession>
    <name>V7BJ57_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ubiquitinyl hydrolase 1</fullName>
            <ecNumber evidence="3">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G007100g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="3"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJ57"/>
    <dbReference type="STRING" id="3885.V7BJ57"/>
    <dbReference type="Gramene" id="ESW18029">
        <property type="protein sequence ID" value="ESW18029"/>
        <property type="gene ID" value="PHAVU_006G007100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1863">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GFGHYFC"/>
    <dbReference type="OrthoDB" id="289038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031647">
        <property type="term" value="P:regulation of protein stability"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000034">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.10.20.90:FF:000050">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.90">
        <property type="entry name" value="Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024729">
        <property type="entry name" value="USP7_ICP0-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029346">
        <property type="entry name" value="USP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF942">
        <property type="entry name" value="UBIQUITIN C-TERMINAL HYDROLASE 12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14533">
        <property type="entry name" value="USP7_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12436">
        <property type="entry name" value="USP7_ICP0_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="5" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="9">
        <location>
            <begin position="1"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="190"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW18029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="776" mass="91523" checksum="DAE0CDBA9EFD2828" modified="2014-02-19" version="1">MVDFLTTATTRRWRCRFSMVAHGGRFCHLGVDAKKGVLFVEFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRDDGKYLSPDADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKEDNKRALEEQYGGEEELPQATPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAAHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKVQIGKAIYFDLVDHDKVRSFRVQKQTSFNLFKEEVAKEFDVPVQFQRYWIWAKRQNHTYRPNRPLTPAEEAQSVGQLREVSNKVHNAELKLFLEVEMGMDSRPIAPPEKTKDDLLLFFKLYDPEKEELRYVGRIFVKCTGKPLEILTRLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKVTFRTSQLEDGDIICFQKASSMDIGDNVRYPDVPSYLEYVHNRQVVHFRSLERPKEDDFFLEMSRLFTYDDVVERVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHAIKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSDPKAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPDEEKSLGPHDRLIHVYHFNKDTAQNQMQIQNFGEPFFLVIHEGETLSEIKVRIQKKLQVPDDEFGKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJH5</accession>
    <name>V7BJH5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_007G217800g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="11" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the AP2/ERF transcription factor family. ERF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW17181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJH5"/>
    <dbReference type="SMR" id="V7BJH5"/>
    <dbReference type="STRING" id="3885.V7BJH5"/>
    <dbReference type="Gramene" id="ESW17180">
        <property type="protein sequence ID" value="ESW17180"/>
        <property type="gene ID" value="PHAVU_007G217800g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW17181">
        <property type="protein sequence ID" value="ESW17181"/>
        <property type="gene ID" value="PHAVU_007G217800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QW91">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FRYGWND"/>
    <dbReference type="OrthoDB" id="1930411at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009873">
        <property type="term" value="P:ethylene-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.730.10:FF:000001">
        <property type="entry name" value="Ethylene-responsive transcription factor 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044808">
        <property type="entry name" value="ERF_plant"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190">
        <property type="entry name" value="DNA-BINDING DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31190:SF376">
        <property type="entry name" value="EREB-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="9">
        <location>
            <begin position="73"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="238"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW17180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="299" mass="33668" checksum="CEE599DD6B0156ED" modified="2014-02-19" version="1">MCGGAIIADFIPRRGRCVAASELWPNSFGKDDDFAFGYSNIAKQEPSTLKTAQPPKVSEKVETKPMKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDDYSIQARNPIPPLPFATQNAAPYQQQYRCDLNNAPSNLNFEFGYDLNHTGAFSSHVDAVKADSVVVSGDENSGLASGSEGAHSTSEFMGSCQKVNGYFSSTVVEKEKEIEVIGAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSMPPNNVQESIVGDLWNFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="38" xmlns="https://uniprot.org/uniprot">
    <accession>V7BJU6</accession>
    <name>V7BJU6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">Gnk2-homologous domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">PHAVU_007G189600g</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell junction</location>
            <location evidence="12">Plasmodesma</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the cysteine-rich repeat secretory protein family. Plasmodesmata-located proteins (PDLD) subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002294">
        <property type="protein sequence ID" value="ESW16846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BJU6"/>
    <dbReference type="SMR" id="V7BJU6"/>
    <dbReference type="STRING" id="3885.V7BJU6"/>
    <dbReference type="Gramene" id="ESW16846">
        <property type="protein sequence ID" value="ESW16846"/>
        <property type="gene ID" value="PHAVU_007G189600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWKZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFKGCAN"/>
    <dbReference type="OrthoDB" id="1926347at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 7"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009506">
        <property type="term" value="C:plasmodesma"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010497">
        <property type="term" value="P:plasmodesmata-mediated intercellular transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046739">
        <property type="term" value="P:transport of virus in multicellular host"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd23509">
        <property type="entry name" value="Gnk2-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000001">
        <property type="entry name" value="cysteine-rich repeat secretory protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.430.20:FF:000008">
        <property type="entry name" value="cysteine-rich repeat secretory protein 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.430.20">
        <property type="entry name" value="Gnk2 domain, C-X8-C-X2-C motif"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051378">
        <property type="entry name" value="Cell2Cell_Antifungal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002902">
        <property type="entry name" value="GNK2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038408">
        <property type="entry name" value="GNK2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32080">
        <property type="entry name" value="ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32080:SF36">
        <property type="entry name" value="PLASMODESMATA-LOCATED PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01657">
        <property type="entry name" value="Stress-antifung"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51473">
        <property type="entry name" value="GNK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0965">Cell junction</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0945">Host-virus interaction</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 15" id="KW-0732">Signal</keyword>
    <keyword evidence="5 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="15">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754424" description="Gnk2-homologous domain-containing protein" evidence="15">
        <location>
            <begin position="30"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="16">
        <location>
            <begin position="32"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Gnk2-homologous" evidence="16">
        <location>
            <begin position="141"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00038393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="ESW16846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="291" mass="31896" checksum="5358D01A53844707" modified="2014-02-19" version="1">MGMIGKSSSLPFLFFFTVFWFLHLPMSDAEETNLVFKGCAEQKLQDPTGIYSRNLKSLLDFLVSQSEKKAFFTTTSGEGQNVIMGLYQCRGDLSNTACCDCVSKIPEMLENLCGKVVASRVQLSGCYLRYEIVGFTQVPETQLLYKVCGSKKDSSDDGFDERRDSAFGMVESGVKNAGNLFYTGSYQSLYVLGQCEGDLAKDDCGDCLKSAEDQAKAECGDPISAQIYLHKCFISYSFYPKEGRSSSAGSLGQQETQKTVALAVGGFAALGFLIACLLFLKSLLKKKGEKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPJ5</accession>
    <name>V7BPJ5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">alpha-1,2-Mannosidase</fullName>
            <ecNumber evidence="13">3.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_006G164400g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>N(4)-(alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;6)]-alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc)-L-asparaginyl-[protein] (N-glucan mannose isomer 9A1,2,3B1,2,3) + 4 H2O = N(4)-(alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;6)]-alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc)-L-asparaginyl-[protein] (N-glucan mannose isomer 5A1,2) + 4 beta-D-mannose</text>
            <dbReference type="Rhea" id="RHEA:56008"/>
            <dbReference type="Rhea" id="RHEA-COMP:14356"/>
            <dbReference type="Rhea" id="RHEA-COMP:14367"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28563"/>
            <dbReference type="ChEBI" id="CHEBI:59087"/>
            <dbReference type="ChEBI" id="CHEBI:139493"/>
            <dbReference type="EC" id="3.2.1.113"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>N(4)-(alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;2)-alpha-D-Man-(1-&gt;6)]-alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc)-L-asparaginyl-[protein] (N-glucan mannose isomer 8A1,2,3B1,3) + 3 H2O = N(4)-(alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;3)-[alpha-D-Man-(1-&gt;6)]-alpha-D-Man-(1-&gt;6)]-beta-D-Man-(1-&gt;4)-beta-D-GlcNAc-(1-&gt;4)-beta-D-GlcNAc)-L-asparaginyl-[protein] (N-glucan mannose isomer 5A1,2) + 3 beta-D-mannose</text>
            <dbReference type="Rhea" id="RHEA:56028"/>
            <dbReference type="Rhea" id="RHEA-COMP:14358"/>
            <dbReference type="Rhea" id="RHEA-COMP:14367"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28563"/>
            <dbReference type="ChEBI" id="CHEBI:59087"/>
            <dbReference type="ChEBI" id="CHEBI:60628"/>
            <dbReference type="EC" id="3.2.1.113"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein glycosylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the glycosyl hydrolase 47 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.-" evidence="13"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPJ5"/>
    <dbReference type="SMR" id="V7BPJ5"/>
    <dbReference type="STRING" id="3885.V7BPJ5"/>
    <dbReference type="Gramene" id="ESW19892">
        <property type="protein sequence ID" value="ESW19892"/>
        <property type="gene ID" value="PHAVU_006G164400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2431">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AAFKHSW"/>
    <dbReference type="OrthoDB" id="8118055at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005768">
        <property type="term" value="C:endosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005802">
        <property type="term" value="C:trans-Golgi network"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004571">
        <property type="term" value="F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.10:FF:000025">
        <property type="entry name" value="alpha-1,2-Mannosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001382">
        <property type="entry name" value="Glyco_hydro_47"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050749">
        <property type="entry name" value="Glycosyl_Hydrolase_47"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036026">
        <property type="entry name" value="Seven-hairpin_glycosidases"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11742:SF55">
        <property type="entry name" value="ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11742">
        <property type="entry name" value="MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01532">
        <property type="entry name" value="Glyco_hydro_47"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00747">
        <property type="entry name" value="GLYHDRLASE47"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48225">
        <property type="entry name" value="Seven-hairpin glycosidases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0106">Calcium</keyword>
    <keyword evidence="7 12" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="13" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="366"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="494"/>
        </location>
    </feature>
    <feature type="active site" evidence="10">
        <location>
            <position position="535"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="622"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" evidence="12">
        <location>
            <begin position="437"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00047669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00048605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR601382-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601382-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR601382-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU361193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW19892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="633" mass="70561" checksum="5F84BCC2F563F8C8" modified="2014-02-19" version="1">MSKSLPYSTKDVDYDNAKFRHRSFSKVVTQNLLTGNLKRDCVSCSTGKFLFLILIFGVAYLVLAHASSGGVVSNDEKIVNRNSYANGSIVDGTGKIKKFWRRPPRLPPRLSPDEKVRSNGGGQILENPDAVRSMWIARQQKVKEAFLHAWSGYKKFAMGRDELMPLSRQGVDGLGGLGATVVDALDTAMIMGLDEIVAEAGSWVEEHLSERIRNKGQVNLFETTIRVLGGLLSAYHLSGGENGTNITQAGPKPEVYLETAKDLADRLLSAFTTSPTVIPFSDVILHDKSAHAAPGGLSSTSEVSTVQLEFNYLSSISGDQKYGLEAMKVMDHMKTLPKHEGLVPIYISPHSGEFSGENIRLGSRGDSYYEYLVKVWLQSGDNSNSNTSFLYEMYKEAMNGVRHRLVQKSIPNGLVFVGELPYGLNGDFSPKMDHLVCFLPGTLALGATKGLTKKQAMQNNMLNFEDLENLKLAEDLTKTCYEMYAVTSTGLAPEIAYFHTKDFSEEGHDGGNKSSEFVNDIIIRPADRHNLLRPETVESLFVLYRITEDPKYREWGWQIFEAFEKHTKVDTGGYCSLDDVTSVPPHKRDKMETFFLGETLKYLYLLFADRSLIPLDRFVFNTEAHPIPINLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="53" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPL1</accession>
    <name>V7BPL1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Peptidase A1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_006G048000g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW18516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPL1"/>
    <dbReference type="SMR" id="V7BPL1"/>
    <dbReference type="Gramene" id="ESW18516">
        <property type="protein sequence ID" value="ESW18516"/>
        <property type="gene ID" value="PHAVU_006G048000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1339">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GDWHVAS"/>
    <dbReference type="OrthoDB" id="2747330at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05472">
        <property type="entry name" value="cnd41_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000013">
        <property type="entry name" value="Aspartyl protease AED1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.70.10:FF:000021">
        <property type="entry name" value="Aspartyl protease AED1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="entry name" value="Acid Proteases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001461">
        <property type="entry name" value="Aspartic_peptidase_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033873">
        <property type="entry name" value="CND41-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033121">
        <property type="entry name" value="PEPTIDASE_A1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032799">
        <property type="entry name" value="TAXi_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032861">
        <property type="entry name" value="TAXi_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683:SF750">
        <property type="entry name" value="ASPARTYL PROTEASE AED1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13683">
        <property type="entry name" value="ASPARTYL PROTEASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14541">
        <property type="entry name" value="TAXi_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14543">
        <property type="entry name" value="TAXi_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00792">
        <property type="entry name" value="PEPSIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="Acid proteases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51767">
        <property type="entry name" value="PEPTIDASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754604" description="Peptidase A1 domain-containing protein" evidence="8">
        <location>
            <begin position="29"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase A1" evidence="9">
        <location>
            <begin position="138"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR601461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW18516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="481" mass="51271" checksum="4B77869318793D9F" modified="2014-02-19" version="1">MAIQMSSLLFSSVTVFFFFFSSLEKTFAFQATIEDAESNNLHLVHLNSLLPSSSCSSSTKDSRRKGSLEVVHKYGPCSQQNDGDRKVTHSDILNVDKERVKYIHSRISKELGGGDSLKELDSATLPAKSGSLIGSGNYFVVVGLGTPKKDLSLIFDTGSDLTWTQCRPCARSCYDQQDPIFDPSKSSSYSNITCTSTLCTQLSSATGNNPGCSAVSKACIYGIQYGDQSFSVGYFSRERLTVTPTDVIDSFLFGCGQNNQGLFGGSAGLIGLGRHPISFVQQTASKYGKIFSYCLPSTSSSTGHLTFGRATSRHLLYTPFSTISRSSSFYGLDIASIAVSGAKLSLTPALFSTGGAIIDSGTVITRLPPTAYAALRSAFRQGMSKYPSAAELSILDTCYDLSANKVISIPKVNFVFSGSVTVELQPQGILYVASAKQVCLAFAANGDDSDITIFGNVQQRTLEVVYDLGGGKIGFGAGGCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7BPY5</accession>
    <name>V7BPY5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">TOG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_006G175600g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SF3B1 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the phosphatase 2A regulatory subunit A family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BPY5"/>
    <dbReference type="SMR" id="V7BPY5"/>
    <dbReference type="STRING" id="3885.V7BPY5"/>
    <dbReference type="Gramene" id="ESW20037">
        <property type="protein sequence ID" value="ESW20037"/>
        <property type="gene ID" value="PHAVU_006G175600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0213">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LVMNYVW"/>
    <dbReference type="OrthoDB" id="438939at2759"/>
    <dbReference type="PhylomeDB" id="V7BPY5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005681">
        <property type="term" value="C:spliceosomal complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000245">
        <property type="term" value="P:spliceosomal complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000066">
        <property type="entry name" value="Splicing factor 3B subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000069">
        <property type="entry name" value="Splicing factor 3B subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000073">
        <property type="entry name" value="Splicing factor 3b, subunit 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021133">
        <property type="entry name" value="HEAT_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR054573">
        <property type="entry name" value="PP2A/SF3B1-like_HEAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015016">
        <property type="entry name" value="SF3b_su1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038737">
        <property type="entry name" value="SF3b_su1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034085">
        <property type="entry name" value="TOG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12097">
        <property type="entry name" value="SPLICING FACTOR 3B, SUBUNIT 1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF22646">
        <property type="entry name" value="PPP2R1A-like_HEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08920">
        <property type="entry name" value="SF3b1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01349">
        <property type="entry name" value="TOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50077">
        <property type="entry name" value="HEAT_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="6" id="KW-0508">mRNA splicing</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0747">Spliceosome</keyword>
    <feature type="repeat" description="HEAT" evidence="9">
        <location>
            <begin position="642"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="domain" description="TOG" evidence="11">
        <location>
            <begin position="838"/>
            <end position="1073"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="27"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="71"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="50"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="97"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="139"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="10">
        <location>
            <begin position="249"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00038332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW20037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="1261" mass="141084" checksum="440E81D40A266F95" modified="2014-02-19" version="1">MASVDPEIAKTQEERKRMEQQLASLNSVTFDTDLYGGSDKDSYLTSIPANEDDENLDAMDNEVARKLASYTAPKSLLKDMPSAPESDADIGFRKPQRIIDREDDYRRRRLNQIISPERHDPFSAGEKTPDPSVRTYSDVMREEALKREKEETLKAISKKKKEEEEAAKAAPPQQQQQKRRNRWDQSQDEGGAAAAPVKKAKTSDWDMPDTTPGRWDATPTPGRVSDATPGRRNRWDETPTPGRVGDSDATPAGGATPGATPAGMTWDATPKLSGMATPTPKRQRSRWDETPATMGSATPLPGATPAAAYTPGVTPVGGIELATPTPGALQGSITPEQYNLLRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEVPGGLPFMKPEDYQYFGALLNEENEEDLSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDEHSNVYSRPELMMFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BQ25</accession>
    <name>V7BQ25_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_006G180200g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW20087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BQ25"/>
    <dbReference type="SMR" id="V7BQ25"/>
    <dbReference type="Gramene" id="ESW20087">
        <property type="protein sequence ID" value="ESW20087"/>
        <property type="gene ID" value="PHAVU_006G180200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQH6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MYAIRQK"/>
    <dbReference type="OrthoDB" id="2015206at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000363">
        <property type="entry name" value="Leucine-rich repeat family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000328">
        <property type="entry name" value="Leucine-rich repeat protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000542">
        <property type="entry name" value="Leucine-rich repeat protein kinase family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000453">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase HSL2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45974:SF266">
        <property type="entry name" value="LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE HPCA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45974">
        <property type="entry name" value="RECEPTOR-LIKE PROTEIN 55"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="13 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-0675">Receptor</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 19" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="19">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754838" description="non-specific serine/threonine protein kinase" evidence="19">
        <location>
            <begin position="24"/>
            <end position="930"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="538"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="609"/>
            <end position="881"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="17">
        <location>
            <begin position="891"/>
            <end position="930"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="17">
        <location>
            <begin position="901"/>
            <end position="915"/>
        </location>
    </feature>
    <feature type="binding site" evidence="16">
        <location>
            <position position="641"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW20087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="930" mass="102442" checksum="0365DE0ECD0E368F" modified="2014-02-19" version="1">MDQQHKVMILLQLLLFQVLFVASQTDSRDYSGLNSLAESWSSKPQSWVGTDPCSSWDGIRCSNTRITELRLPSLSLRGQLSSAIESLSELVTLDLSYNTGLTGTIPNEIGNLKRLKSLSLVGCGFSGPIPDSIGSLKQLTFLALNSNKFSGTIPRSLGNLTNINWLDLAENELVGTIPVSDNQGRLGLDLLLKAQHFHMGSNNLTGTIPEKLFNSSMILEHVLFDHNQLEGSVPLSISSVGTLEVLRLDKNGLTGAVPANLSKLGKLSEIYLSHNKFNGTLPDFTGMNSLTYVDLSDNTFSASNVPSWVTSLPVLTTVILGQNHLGGTLNLSGHSQSLEQINLENNDITEIDPESNLPSIEIRLANNPICRESGASEKSYCQQPVSNPSFYSTPSNNCSPPPCSSDQIASPNCNCAFPYTGLLISRALSFSNFSDAKYYREIEQSLMDTFRNKSIPVDSVALSNPVRNPTSDNFELNLQVFPSQSDRFNATGILNIAFLLSNQIYKPPEFFSPYYFNGASYEYTAGEPKGSKSSHTGIIVGAVVAVVVFVVLASLAGMYAIRQKRRAERSAGLNPFANWEQNKNSGTAPQLKGGRWFAFDELRKYTNNFSEANTIGSGGYGQVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLLGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVTLGAARGLAYLHELANPPIIHRDIKSSNILLDDHLIAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSIIDPTILKTRPKGLEKFVMLGMRCVKEYAAERPTMAEVAKEIESIIELVGLNPNAESATTSETYEEAGKENAQHPYKEEDFSYSGIFPSTRVEPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRN9</accession>
    <name>V7BRN9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Subtilisin-like protease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_006G108700g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002293">
        <property type="protein sequence ID" value="ESW19246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRN9"/>
    <dbReference type="SMR" id="V7BRN9"/>
    <dbReference type="MEROPS" id="S08.150"/>
    <dbReference type="Gramene" id="ESW19246">
        <property type="protein sequence ID" value="ESW19246"/>
        <property type="gene ID" value="PHAVU_006G108700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT5U">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FMPTIFA"/>
    <dbReference type="OrthoDB" id="206201at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 6"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009609">
        <property type="term" value="P:response to symbiotic bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009610">
        <property type="term" value="P:response to symbiotic fungus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd02120">
        <property type="entry name" value="PA_subtilisin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd04852">
        <property type="entry name" value="Peptidases_S8_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.200:FF:000006">
        <property type="entry name" value="Subtilisin-like protease SBT1.5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.70.80:FF:000003">
        <property type="entry name" value="Subtilisin-like protease SBT1.9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.80">
        <property type="entry name" value="Peptidase S8 propeptide/proteinase inhibitor I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="entry name" value="Peptidase S8/S53 domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034197">
        <property type="entry name" value="Peptidases_S8_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010259">
        <property type="entry name" value="S8pro/Inhibitor_I9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037045">
        <property type="entry name" value="S8pro/Inhibitor_I9_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045051">
        <property type="entry name" value="SBT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041469">
        <property type="entry name" value="Subtilisin-like_FN3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10795">
        <property type="entry name" value="PROPROTEIN CONVERTASE SUBTILISIN/KEXIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17766">
        <property type="entry name" value="fn3_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05922">
        <property type="entry name" value="Inhibitor_I9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="Subtilisin-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51892">
        <property type="entry name" value="SUBTILASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="6 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 10" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <keyword evidence="7 10" id="KW-0720">Serine protease</keyword>
    <keyword evidence="5 11" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="11">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004754669" description="Subtilisin-like protease" evidence="11">
        <location>
            <begin position="32"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="domain" description="Inhibitor I9" evidence="13">
        <location>
            <begin position="35"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S8/S53" evidence="12">
        <location>
            <begin position="137"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="domain" description="Subtilisin-like protease fibronectin type-III" evidence="14">
        <location>
            <begin position="655"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="9 10">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="9 10">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="9 10">
        <location>
            <position position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR615500-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF05922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF17766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW19246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="765" mass="82430" checksum="90708FDC913556F5" modified="2014-02-19" version="1">MSKTMKRVNPFCLSHIIVALSMVCLVWQCNSKAVTYIVHMDKSYMPKVFTSHRHWYSSTLTSLDSTQHVNSSILYSYENALHGFSVALSPQQLESLKETPGFISAYRDRATTLDTTASYAFLSLNISHGLWPASNYGQNVVVGVVDSGIWPESDSFKDDGMVIQTPPKWKGKCEGGQRFDPSLCNSKLVGARYFNKGLLAAHDGDDVTKIGADSVRDSVGHGTHTASTVAGNYVRGASYFGYAKGTARGIAPRAKIAMYKVAWAQGVFASDMLAGLDQAIADGVDVISISMGFDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPFLGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRFSGWTVFPGSATVNNLPLVYHNKASACDSSTLLSQVARGSVVICDSVMDVNQQIQHVSLSQVYGAVFISADPTLFEKGKMTFPGLVISPHQGQNVIEYARATPLASATIKFQETYVGTKRAPTVASYSSRGPSWECPWVLKPDVMAPGSSILAAWVPDLPAAQIGPNVLLNNEYNLLSGTSMACPHASGVVALLRNAHPEWSASAVRSALTTTASPLDNTGKPIEENGELFQRASPLAMGAGLIDPNRALDPGLIYDATPQDYVNLLCAMNFTQAQILAITRSKDYNCSSPSYDVNYPSFVAFSVDKSVAVERKFRRSVTYVGDGSAVYTARVSSSNGTQISVSPNRLVFKAKYEKRKFSLMLKSEMKKENVVPFGSLEWVEETGRHVVRSPLVVLPSTFVFNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BRZ6</accession>
    <name>V7BRZ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Retrotransposon gag domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G013900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW20777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BRZ6"/>
    <dbReference type="Gramene" id="ESW20777">
        <property type="protein sequence ID" value="ESW20777"/>
        <property type="gene ID" value="PHAVU_005G013900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMENGHY"/>
    <dbReference type="OrthoDB" id="1729427at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47481">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47481:SF10">
        <property type="entry name" value="COPIA-LIKE POLYPROTEIN_RETROTRANSPOSON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14223">
        <property type="entry name" value="Retrotran_gag_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="170"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="170"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="180"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW20777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="330" mass="36988" checksum="5BECCA8EEBDA0693" modified="2014-02-19" version="1">MEKDQYGTWAELFRIHARSHCVLHHIVPFTTTPPPAPTSADYEQWITLDATVLQWIYSTISTDLLTTILEPDSTAAAAWNRLADIFQDNQNARAVTLEQEFSTTRMEDFANVSAYCQRLKMLSDQLRNVGSPVNNHRLCCNWIRQSNPLPAFYQARSMLTLEEAGMAKMTSTGSHTVLHTTQQQPSTDTSQQNTRHSGNRSHPRGNQGRGGRRGNRSASRSGASNTPPSWSSPPWQQQQQYPAWHQWGWSPPPWTMPPCPYPTSQWTRPTGPPKPGILGQRPQAYIATTSPTPTDIEAAMHTMSLQTPDAPKSLLVMAIVFQFTAPDTHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7BST4</accession>
    <name>V7BST4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NAD-dependent epimerase/dehydratase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_005G034600g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BST4"/>
    <dbReference type="SMR" id="V7BST4"/>
    <dbReference type="STRING" id="3885.V7BST4"/>
    <dbReference type="Gramene" id="ESW21024">
        <property type="protein sequence ID" value="ESW21024"/>
        <property type="gene ID" value="PHAVU_005G034600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1502">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSFVYMS"/>
    <dbReference type="OrthoDB" id="2735536at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08958">
        <property type="entry name" value="FR_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000085">
        <property type="entry name" value="Dihydroflavonol reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050425">
        <property type="entry name" value="NAD(P)_dehydrat-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366:SF852">
        <property type="entry name" value="CINNAMOYL-COA REDUCTASE CAD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10366">
        <property type="entry name" value="NAD DEPENDENT EPIMERASE/DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD-dependent epimerase/dehydratase" evidence="4">
        <location>
            <begin position="9"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW21024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="325" mass="35819" checksum="8197B23DECD542E1" modified="2014-02-19" version="1">MSTGAGQVVCVTGASGYIASWVVKFLLERGYTVKATVRDPNNSSKVDHLLNLDGAKERLHLVKANLLEEGSFDSAVEGVHAVFHTASPFFNNAKDPQTELLDPALKGTLNVLKSCVKSPTLKRVVLTSSVAAVSFNYRPKTPDVVVDETWYSDPEYCKENGLWYNLSKTLAEDAAWKFAKENNIDLVTMNPALVVGPLLQPELNTSSAMVLSLVDGSPTFGNVTLGWVDVRDVAMAHILAYESASANGRYVLVERVAHFSDVVKFLRDLYPTLQLPEKCVDDKPYDPIFQVSKEKAKSLGIEYIPLEVSIKDTVESLKEKNFVKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7BU76</accession>
    <name>V7BU76_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_005G077100g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RLP family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BU76"/>
    <dbReference type="SMR" id="V7BU76"/>
    <dbReference type="STRING" id="3885.V7BU76"/>
    <dbReference type="Gramene" id="ESW21514">
        <property type="protein sequence ID" value="ESW21514"/>
        <property type="gene ID" value="PHAVU_005G077100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0619">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ETENPPW"/>
    <dbReference type="OrthoDB" id="4691307at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000111">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase ERECTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.80.10.10:FF:000095">
        <property type="entry name" value="LRR receptor-like serine/threonine-protein kinase GSO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="entry name" value="Ribonuclease Inhibitor"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001611">
        <property type="entry name" value="Leu-rich_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003591">
        <property type="entry name" value="Leu-rich_rpt_typical-subtyp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48052:SF8">
        <property type="entry name" value="LRR RECEPTOR-LIKE SERINE_THREONINE-PROTEIN KINASE FLS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48052">
        <property type="entry name" value="UNNAMED PRODUCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00560">
        <property type="entry name" value="LRR_1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13855">
        <property type="entry name" value="LRR_8"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00019">
        <property type="entry name" value="LEURICHRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00369">
        <property type="entry name" value="LRR_TYP"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52058">
        <property type="entry name" value="L domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52047">
        <property type="entry name" value="RNI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51450">
        <property type="entry name" value="LRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="680"/>
            <end position="704"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="711"/>
            <end position="731"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW21514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="740" mass="83281" checksum="E5E67804885135A2" modified="2014-02-19" version="1" fragment="single">AHSTESYVLKKLKTLKLAGNNFDKGILKSLLVAFPNLKSLNLGYNPIKGDLDKVLSDLSILEVLELRSADISGTFPNQGLCKMKKLQKLDLSFNNLRGTLDKCFENLTSLRYLDFSFNYLSGNATSFVAHITSIEYLSIAFNKFDGIFSFSIFANHSKLKELLIADMTVETENPPWVPSFQLEQLSIADCELKSPTKIPTFISNQSSLRVLDLSGNNLVGKFPSWLLMNNPNLEEVYLFDNSFTGPIELPFDQNHHMHQMKVLAISNNKLQGKLPNSVGFFFPRLVTLDVSNNSLDGPIPASIGEMSNLMGLFLGNNNFSGNVPERILNRCFSLQTLTMDNNQFNGTLLSMIRMLRLTFLTASGNNIEGEITDEWCQHEFLTLDISHNKFSGSLPSCFKMAAYLFLRGNNFSGSIPELFMSNHSPATVIDFSDNKFTGTIPDSVYKLRSLRLLLLAGNNLQGQISSQICQLKLINILDLSQNNFSGSIPACFSNMSFGNVIPPFYSTDRAQPFGPRPYFTVVQLTTKNLCLSYGVYIFEFLSELDLSCNQLTGEIPHQIGDLHGLRSLNLSHNHLNGLIPESFHKLETIESLDISNNNLSGQIPLQLQDLHFLAVFNVSYNNLSGKALDKGQFCTFDWSSYKGNPYLTWPSCKSDSLKPPLLPTLLGDDDEEEDDSEIDFNVFCLGFATCYVMVLVALVTVLWINPHWRRVWFYFVQVCLHQCFGQFLHGLQKFLTFQYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7BW92</accession>
    <name>V7BW92_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RING-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G060500g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BW92"/>
    <dbReference type="STRING" id="3885.V7BW92"/>
    <dbReference type="Gramene" id="ESW21313">
        <property type="protein sequence ID" value="ESW21313"/>
        <property type="gene ID" value="PHAVU_005G060500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2789">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PNAMSRT"/>
    <dbReference type="OrthoDB" id="21471at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046620">
        <property type="term" value="P:regulation of organ growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080113">
        <property type="term" value="P:regulation of seed growth"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039301">
        <property type="entry name" value="Sip5/DA2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001841">
        <property type="entry name" value="Znf_RING"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31315">
        <property type="entry name" value="PROTEIN SIP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31315:SF1">
        <property type="entry name" value="PROTEIN SIP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50089">
        <property type="entry name" value="ZF_RING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <keyword evidence="1" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RING-type" evidence="2">
        <location>
            <begin position="59"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW21313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="227" mass="26003" checksum="BDFBB93C45B8C96F" modified="2014-02-19" version="1">MGNKLGRRRQVVDEKYTRPQGLYNHKDVDHKKLRKLILESKLAPCYPGDEESVYDREECPICFLYYPSLNRSRCCAKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKGLEQIEEQRVIEAKIRIRQQELQDEEEKMHKRLEMSSSNVNVAVADVEYSSNAVSASSISVVEHDEIVSSQDSSATSMVRPNAMSRTNRYASLHCSTPQFPISLIYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWN2</accession>
    <name>V7BWN2_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G146600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWN2"/>
    <dbReference type="Gramene" id="ESW22349">
        <property type="protein sequence ID" value="ESW22349"/>
        <property type="gene ID" value="PHAVU_005G146600g"/>
    </dbReference>
    <dbReference type="OMA" id="WEHPAMA"/>
    <dbReference type="OrthoDB" id="773117at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040381">
        <property type="entry name" value="At4g14450-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33912:SF5">
        <property type="entry name" value="F22G5.17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33912">
        <property type="entry name" value="OS01G0939400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW22349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="126" mass="14028" checksum="D5C4EFC583BD1653" modified="2014-02-19" version="1">MEMEYKASLMKRRRGGGCTTRLQMHAPASLDIDKVLCDRPSNPFGEVSKAIPLLSPLTFSHQPIYEDITIHERTSQNIENSNGSGMNEDRTPSTGWEHPAMASFPQASSSSFCSFFQKKCVCVNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWN5</accession>
    <name>V7BWN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycosyltransferase subfamily 4-like N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_005G147000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW22354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWN5"/>
    <dbReference type="SMR" id="V7BWN5"/>
    <dbReference type="STRING" id="3885.V7BWN5"/>
    <dbReference type="Gramene" id="ESW22354">
        <property type="protein sequence ID" value="ESW22354"/>
        <property type="gene ID" value="PHAVU_005G147000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QSX1">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FPNYAHH"/>
    <dbReference type="OrthoDB" id="734129at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="CDD" id="cd03801">
        <property type="entry name" value="GT4_PimA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46686">
        <property type="entry name" value="GLYCOSYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46686:SF4">
        <property type="entry name" value="GLYCOSYLTRANSFERASE FAMILY 4 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13692">
        <property type="entry name" value="Glyco_trans_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Glycosyltransferase subfamily 4-like N-terminal" evidence="2">
        <location>
            <begin position="93"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW22354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="487" mass="54531" checksum="941558AA0C3B8167" modified="2014-02-19" version="1">MAKDRSSIFSFQYFCYVVIILSICSIILSLSWSHCCSQCHSPYQVTVTEKNPRINLLSYPSAWNHLVFSSEPPSKFLKIALFVRKWPHKSRAGGLERHALTLHLALAKRGHDLHIFTTSTDSSLSNSSIDHNLHFHFSKPTPAGYLDQASVWEQFQAQNSSGKPFDVVHTESVGLRYTRSRYVTNLAVTWHGIAYETFHSDIIQELLRTPQEPKTKALTERAVKVVEEVKFFPNYAHHVATSDHAGDILKRVYMIPEERVHIILNGVDQQVFRSDVSKGIEFKKRHGIPDSKSLVIGLAGRLVKDKGHPLMFEALKQIIAENSSFQESSMVVVAGDGPWGARYRDLGANVLVLGSLEQAELACFYNAIDIFANPTLRAQGLDHTLLEAMLTGKPVMATRLASIAGSVIVGNEMGYTFSPTVSDLKKAIYELWISGRDGLEKKGQVAMQRGLQLFTATKMAAAYERLFLCISSAMHENHFCEYQPPGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7BWU9</accession>
    <name>V7BWU9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">PHAVU_005G077400g</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BWU9"/>
    <dbReference type="Gramene" id="ESW21518">
        <property type="protein sequence ID" value="ESW21518"/>
        <property type="gene ID" value="PHAVU_005G077400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVI9">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NNDELYM"/>
    <dbReference type="OrthoDB" id="1938112at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000217">
        <property type="entry name" value="probable LRR receptor-like serine/threonine-protein kinase At1g53430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.60.120.430:FF:000004">
        <property type="entry name" value="Putative leucine-rich repeat receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000044">
        <property type="entry name" value="Putative LRR receptor-like serine/threonine-protein kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.430">
        <property type="entry name" value="Galactose-binding lectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051824">
        <property type="entry name" value="LRR_Rcpt-Like_S/T_Kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021720">
        <property type="entry name" value="Malectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001245">
        <property type="entry name" value="Ser-Thr/Tyr_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48006:SF71">
        <property type="entry name" value="CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48006">
        <property type="entry name" value="LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11721">
        <property type="entry name" value="Malectin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07714">
        <property type="entry name" value="PK_Tyr_Ser-Thr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="16" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-0433">Leucine-rich repeat</keyword>
    <keyword evidence="14 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-0675">Receptor</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="274"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="20">
        <location>
            <begin position="330"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="21">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00048679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="ESW21518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="673" mass="75119" checksum="592175989C01A0FB" modified="2014-02-19" version="1" fragment="single">YLTGNLFTGPLPNWIDRPDYTDLSYNNLSIENPEQLTCQQGSVNLFASSLKGNDSGMVSCLGNNNCPKTLYSLHVNCGGKLISNGNIKYDDDSQEAGPARFRRTGSNWVFSNTGHFFDSGRVDYYTWSNTTKLDNNNDELYMDARVSPLSLTYYAFCMGNGSYTISLHFAEIMFTDDQTYSSLGRRVFDIYVQRKLVLKDFNIAKEAGGVGKAIIKKFTATVNSSTLEIRLQWAGKGTTGIPFGSVHGPLISAISVDPDFTPQEENKDGVPKHYIVAIITGALVIIIIFAIAWWRGCLRRKVSLQKELMGVDFQTGLFSLRKIKAATKNFDINFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGNQLMLIYEYMENNSLARALFEPEKFELNLNWSTRQKICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEDGYTHITTRVAGTYGYMAPEYAMHGYLSGKADVYSFGVVALEIVSGKSNSMNWPKEGCFSLVDLVHLLKEQGDLMDLVDERLGKDFKKDEVIVMINVALLCTQVSPMHRPTMASVVCMLEGKTNVQEVVLDTSEVMDGKKLEMQQYYNIRDKNITEETQEESISMSETSAFMSDTDLYSINMDSSFLEKSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="30" xmlns="https://uniprot.org/uniprot">
    <accession>V7BX61</accession>
    <name>V7BX61_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Replication factor A C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G044800g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BX61"/>
    <dbReference type="Gramene" id="ESW21136">
        <property type="protein sequence ID" value="ESW21136"/>
        <property type="gene ID" value="PHAVU_005G044800g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436442at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013955">
        <property type="entry name" value="Rep_factor-A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08646">
        <property type="entry name" value="Rep_fac-A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Replication factor A C-terminal" evidence="1">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="161" mass="18566" checksum="944F963A4085165D" modified="2014-02-19" version="1">MFFCEKCNKHVMKVTHRYKVQLRVIDDIDSTTFMLFDREASSLLSKSCAEINLPNEFAQILEKKVLFKVDSKMDKGFRFEQTFKVKKNCVDEDIIQLFISDNNSSLTKFGSECNEAQSQIVDLSNDSVTVTPLKRQSPPLLQVAEDNLSLKTFKRTVQIEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7BXG0</accession>
    <name>V7BXG0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_005G0964001g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002292">
        <property type="protein sequence ID" value="ESW21748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7BXG0"/>
    <dbReference type="Gramene" id="ESW21748">
        <property type="protein sequence ID" value="ESW21748"/>
        <property type="gene ID" value="PHAVU_005G0964001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQU2">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ENACTGA"/>
    <dbReference type="OrthoDB" id="3142841at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 5"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR052979">
        <property type="entry name" value="Adenylate-forming_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33927:SF6">
        <property type="entry name" value="PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33927">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW21748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="128" mass="14223" checksum="877B88344049186A" modified="2014-02-19" version="1">MHFAGLPYLVNLYQRVLLVATGSGICVFLSFLLQPSKANVCLIWVAKDIELNFGKEIRELVNKYPKEKVMVHDTAISGRPNVAEISVNAAIRWNVEVVIVTSNPEGSRDVLRACKRANIPAFGPIWDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7C104</accession>
    <name>V7C104_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Protein farnesyltransferase subunit beta</fullName>
            <shortName evidence="10">FTase-beta</shortName>
            <ecNumber evidence="2 10">2.5.1.58</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">PHAVU_004G014500g</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-cysteinyl-[protein] + (2E,6E)-farnesyl diphosphate = S-(2E,6E)-farnesyl-L-cysteinyl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13345"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11535"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:86019"/>
            <dbReference type="ChEBI" id="CHEBI:175763"/>
            <dbReference type="EC" id="2.5.1.58"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Heterodimer of FTA and FTB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 10">Belongs to the protein prenyltransferase subunit beta family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.58" evidence="2 10"/>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C104"/>
    <dbReference type="SMR" id="V7C104"/>
    <dbReference type="STRING" id="3885.V7C104"/>
    <dbReference type="Gramene" id="ESW23048">
        <property type="protein sequence ID" value="ESW23048"/>
        <property type="gene ID" value="PHAVU_004G014500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0365">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WCIYWIL"/>
    <dbReference type="OrthoDB" id="10261146at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005965">
        <property type="term" value="C:protein farnesyltransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004660">
        <property type="term" value="F:protein farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097354">
        <property type="term" value="P:prenylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02893">
        <property type="entry name" value="FTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.50.10.20:FF:000017">
        <property type="entry name" value="Protein farnesyltransferase subunit beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026872">
        <property type="entry name" value="FTB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045089">
        <property type="entry name" value="PGGT1B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001330">
        <property type="entry name" value="Prenyltrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774">
        <property type="entry name" value="GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11774:SF6">
        <property type="entry name" value="PROTEIN FARNESYLTRANSFERASE SUBUNIT BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00432">
        <property type="entry name" value="Prenyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="Terpenoid cyclases/Protein prenyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 10" id="KW-0637">Prenyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Prenyltransferase alpha-alpha toroid" evidence="12">
        <location>
            <begin position="56"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00050225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="ESW23048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="456" mass="51089" checksum="AB23E900672FA5A3" modified="2014-02-19" version="1">MSDLSEKETNPPATEAAPPCPTVTQRDQWMVESQVFQIYHLFATIPPNAQTLMMELQRENHMQFLSKGLRHLSSAFSVLDSNRPWLCYWIFHSIALLGESVEDELEDNTIEFLSRCQDPDGGYAGGPGQMPHIATTYAAVNTLITLGSQKSLASINRDKLHGFLRRMKQSNGGFRMHDDGEIDIRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIGGEPGSEAHGGYTFCGLAAMILIGEANRLDLPRLIDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLYSIVDKQMEETSQIFTISTVSEDKESLDGTSSHATRHGTIESGSTDIKSIAYKFINEWRAQEPLFHSIALQQYILLCAQEQEGGLRDKPGKRRDHYHTCYCLSGLSLCQYSLSKHPDSPPLPKVVLGPYSNLLEPIHPLFNVVLERYREAHEFFTESHDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="32" xmlns="https://uniprot.org/uniprot">
    <accession>V7C2T1</accession>
    <name>V7C2T1_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Neoxanthin synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G065900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C2T1"/>
    <dbReference type="Gramene" id="ESW23663">
        <property type="protein sequence ID" value="ESW23663"/>
        <property type="gene ID" value="PHAVU_004G065900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVVZ">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="196782at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025461">
        <property type="entry name" value="ABA4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543">
        <property type="entry name" value="PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34543:SF1">
        <property type="entry name" value="PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14108">
        <property type="entry name" value="ABA4-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="197" mass="21861" checksum="E598AC3BE1063AD4" modified="2014-02-19" version="1">MAFSSFFCHSPLPLKAKKSCGTVEKEQKFPFPIRSNGAQPELCNQSPLSQRSRVSLIRDWSFIGGSRVAMKPKILTLVPFRKARRVYASWLSGSELASTAFTLGTTAVLPFYTLMVVAPKSELTKKCMESSVPYIGLGVLYAYLLHLSWTPETTGLIFASKYLLPELTSIGKMFSSEITLASAWIHLLVIDLYAARL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7C374</accession>
    <name>V7C374_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_004G0707000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW23725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C374"/>
    <dbReference type="Gramene" id="ESW23725">
        <property type="protein sequence ID" value="ESW23725"/>
        <property type="gene ID" value="PHAVU_004G0707000g"/>
    </dbReference>
    <dbReference type="OMA" id="WRAADTT"/>
    <dbReference type="OrthoDB" id="1435562at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056712">
        <property type="entry name" value="DUF7810"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25102">
        <property type="entry name" value="DUF7810"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW23725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="110" mass="12049" checksum="262CBD048B20A389" modified="2014-02-19" version="1" fragment="single">MRHGGGKRKRVAPKPFVVLCSLVTGLFGLLVLVFRPMEDAPRTPVPFARASEFNGSSLDGGRSMEGVVAFERVAEKACKTVEEMGEDYGRGVGKESLRVRKIIENHFVAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="42" xmlns="https://uniprot.org/uniprot">
    <accession>V7C3R2</accession>
    <name>V7C3R2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">SNARE-complex protein Syntaxin-18 N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_004G157700g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type IV membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the syntaxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C3R2"/>
    <dbReference type="SMR" id="V7C3R2"/>
    <dbReference type="STRING" id="3885.V7C3R2"/>
    <dbReference type="Gramene" id="ESW24759">
        <property type="protein sequence ID" value="ESW24759"/>
        <property type="gene ID" value="PHAVU_004G157700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3894">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="FVFQCRE"/>
    <dbReference type="OrthoDB" id="342981at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="EnsemblPlants"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031201">
        <property type="term" value="C:SNARE complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006890">
        <property type="term" value="P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.5.110:FF:000039">
        <property type="entry name" value="Syntaxin-81 like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010989">
        <property type="entry name" value="SNARE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019529">
        <property type="entry name" value="Syntaxin-18_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15959">
        <property type="entry name" value="SYNTAXIN-18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15959:SF0">
        <property type="entry name" value="SYNTAXIN-18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10496">
        <property type="entry name" value="Syntaxin-18_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47661">
        <property type="entry name" value="t-snare proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="SNARE-complex protein Syntaxin-18 N-terminal" evidence="11">
        <location>
            <begin position="5"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="173"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF10496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW24759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="309" mass="35431" checksum="47F7CEC5F47C817E" modified="2014-02-19" version="1">MGKARDRTEDFKDAVRHTAHSLGYDEAKLASIMASFIIHKPPQRSPFSKAALKTLESIGELDQFLLKHRKDYTDLHRTTEKERDGIEHEVSTFIKTCQEQIDILKNSINQEEEHSKGWLGIAATKSNADTIAHKHGVVLILSERLHTVTAQFDQLRAVRFQDAINKAMPRRKLNRVTRKDSAETSKSDGMELREPEELRAEPLRVQQQLLDDETRALQVELTTLLDTVQETETKMVEMSALNHLMSTHVLHQAQQIEHLYEQAVEATTNVELGNKELSQAIKRNSSSRTFLLLFLFVLTFSVLFLDWYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7C5X8</accession>
    <name>V7C5X8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">AP2/ERF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_004G157600g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002291">
        <property type="protein sequence ID" value="ESW24758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C5X8"/>
    <dbReference type="SMR" id="V7C5X8"/>
    <dbReference type="STRING" id="3885.V7C5X8"/>
    <dbReference type="Gramene" id="ESW24758">
        <property type="protein sequence ID" value="ESW24758"/>
        <property type="gene ID" value="PHAVU_004G157600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S2BD">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QRRKWGK"/>
    <dbReference type="OrthoDB" id="1276482at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 4"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00018">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.730.10">
        <property type="entry name" value="AP2/ERF domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001471">
        <property type="entry name" value="AP2/ERF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036955">
        <property type="entry name" value="AP2/ERF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050913">
        <property type="entry name" value="AP2/ERF_ERF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016177">
        <property type="entry name" value="DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31194:SF187">
        <property type="entry name" value="ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF118-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31194">
        <property type="entry name" value="SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00847">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00367">
        <property type="entry name" value="ETHRSPELEMNT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00380">
        <property type="entry name" value="AP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54171">
        <property type="entry name" value="DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51032">
        <property type="entry name" value="AP2_ERF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="AP2/ERF" evidence="7">
        <location>
            <begin position="116"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="11"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW24758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="315" mass="35578" checksum="DE18E8B7EA4E6FF4" modified="2014-02-19" version="1">MSGIPRATRHQGMECKRGKEKVPAKEVDVRTMMKLRIVYTDPDATDYSSEEEDDKLLSNGYQFDSCSKRVVKEILLPCMQSKSQEESSSEDANSEKIKASSSGYFSSRRMRKSSSMYKGVQRRKWGKYVAEIRDPIEGVRVWLGTFDTEQEAAMAYERKKNEFENYLLASSKRDFESSKEMLFHASPSSVLDVSTTKAPPDVNDLNDSVKEKVNVEKVGEGGGIDTEPVNSEDNSTQHLLEEFVPSLFGHEDFYLDEAEKGGMLLGNDFYNFSDNDIKGGFMWNVEHGEATVLPPVDSAFDELAWIDETLNLENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="52" xmlns="https://uniprot.org/uniprot">
    <accession>V7C6D0</accession>
    <name>V7C6D0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">B-like cyclin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_003G054900g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Interacts with the CDC2 protein kinase to form a serine/threonine kinase holoenzyme complex also known as maturation promoting factor (MPF). The cyclin subunit imparts substrate specificity to the complex.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW25664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C6D0"/>
    <dbReference type="STRING" id="3885.V7C6D0"/>
    <dbReference type="Gramene" id="ESW25664">
        <property type="protein sequence ID" value="ESW25664"/>
        <property type="gene ID" value="PHAVU_003G054900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0656">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WRMFQHS"/>
    <dbReference type="OrthoDB" id="5590282at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.10">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039361">
        <property type="entry name" value="Cyclin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036915">
        <property type="entry name" value="Cyclin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004367">
        <property type="entry name" value="Cyclin_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006671">
        <property type="entry name" value="Cyclin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10177">
        <property type="entry name" value="CYCLINS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02984">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00134">
        <property type="entry name" value="Cyclin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01332">
        <property type="entry name" value="Cyclin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47954">
        <property type="entry name" value="Cyclin-like"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0195">Cyclin</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclin C-terminal" evidence="6">
        <location>
            <begin position="85"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW25664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="241" mass="27032" checksum="DC41F624D5CE9E28" modified="2014-02-19" version="1">MIVMIFSIHCLIHDPVHTCLQQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYMFEPRTIRKMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFTTFLISQATEIIVSNIQEASFLAYRPSCIAAAAIVSAAKEIPNWAALKPEHAESWCEGLRKEKIIGCYQLMQELVVNNNRRKLPIVLPQLRVTTRTRMRSSVTSFSSSSSSSSSFCLSCKRRKLNNCLWVDDKGNSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9I7</accession>
    <name>V7C9I7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Transmembrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_003G152700g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TMEM208 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9I7"/>
    <dbReference type="STRING" id="3885.V7C9I7"/>
    <dbReference type="Gramene" id="ESW26842">
        <property type="protein sequence ID" value="ESW26842"/>
        <property type="gene ID" value="PHAVU_003G152700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3269">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PIRAGWM"/>
    <dbReference type="OrthoDB" id="276296at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="GOC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006624">
        <property type="term" value="P:vacuolar protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008506">
        <property type="entry name" value="SND2/TMEM208"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13505">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13505:SF7">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN 208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05620">
        <property type="entry name" value="TMEM208_SND2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="142"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="148"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="163"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW26842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="173" mass="19836" checksum="84D545104985C603" modified="2014-02-19" version="1">MANQGAKKRKEENARHMARLRQVIIACNVIYVLLRMLVFHSSFTWKHWIGLILTSLAYVIPYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIISGKFWFAYLVIPAFGAYKSFGFIKGFLPQGSEESFEDEKTRKKREKMEKKASRPKFVKTRTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="67" xmlns="https://uniprot.org/uniprot">
    <accession>V7C9P8</accession>
    <name>V7C9P8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Two-component response regulator</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_003G158200g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Transcriptional activator that binds specific DNA sequence.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ARR family. Type-B subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW26907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7C9P8"/>
    <dbReference type="SMR" id="V7C9P8"/>
    <dbReference type="STRING" id="3885.V7C9P8"/>
    <dbReference type="Gramene" id="ESW26907">
        <property type="protein sequence ID" value="ESW26907"/>
        <property type="gene ID" value="PHAVU_003G158200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1601">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NTRGMNS"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009736">
        <property type="term" value="P:cytokinin-activated signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17584">
        <property type="entry name" value="REC_typeB_ARR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000007">
        <property type="entry name" value="Two-component response regulator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045279">
        <property type="entry name" value="ARR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017053">
        <property type="entry name" value="Response_reg_B-typ_pln"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43874">
        <property type="entry name" value="TWO-COMPONENT RESPONSE REGULATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43874:SF205">
        <property type="entry name" value="TWO-COMPONENT RESPONSE REGULATOR ORR23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036392">
        <property type="entry name" value="RR_ARR_type-B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="CheY-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0010">Activator</keyword>
    <keyword evidence="4" id="KW-0932">Cytokinin signaling pathway</keyword>
    <keyword evidence="7 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="3 12" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 11" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5 11" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="14">
        <location>
            <begin position="12"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="HTH myb-type" evidence="15">
        <location>
            <begin position="206"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="173"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="13">
        <location>
            <begin position="190"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="12">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR036392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW26907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="677" mass="74541" checksum="F16D339F1B92DDB5" modified="2014-02-19" version="1">MEEEDHFPVGLRVLAVDDDRTYLTVLENLLRKCQYNVTATTEAVKALEMLRKNRNMFDLVVSDVNMPEMDGFKLLQHVGLETDLPVIMLSGYGDKERVMKGVIYGACDFLTKPVRIQELQNIWQHVVRRKIDGKDKNKTASEEINCSMSGKVANEEEPCTIAGECSQALEPKTNADQNIKGDRKRKERCEAEEVEEDDKENDEPSNHKKSRLVWDAELHNKFLAAINQLGIEKAFPKKILDLMNIDGLSRENVASHLQKFRLGLKKPNPYHRMGSVDCFRPSSESGSMLSTTLPSYAYAPGGRFGVLNAPSSLNTRGMNSSAIVQAAQSLNINSSSIKTHGNMHSSIFSANQTSSLLQGIPTSIEANQFKPNNSPAGIRRFNLLDRSTGFKDFSSFSENRATVRNAANVSLPGFSNNHLLFQGISQLTHHSEPFRNHSSFGSASVKAQSFDPNSCGWPKMGDDYNNKSWQGAAPISIFPSSTSAVSNVFNDDQLLQHNFKLSPSTFCSRNSPVGFSSSVPLEDDVLGEMLQQEGLHGNILLASSYTQHNKGGCSKDTSQTFNSINPVISPNGGTSSLGHCYDQNNAVDNKSIDASLVGQMNGVNPSITQSSEGENFYSMKSNDEYVLPSLKSGEGLLHNGLESLDEIMNEIDEQELNAIMLMDGGIEFDAYNDGSCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CD80</accession>
    <name>V7CD80_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_003G2599001g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002290">
        <property type="protein sequence ID" value="ESW28109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CD80"/>
    <dbReference type="Gramene" id="ESW28109">
        <property type="protein sequence ID" value="ESW28109"/>
        <property type="gene ID" value="PHAVU_003G2599001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2182">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1735038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 3"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005773">
        <property type="term" value="C:vacuole"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008239">
        <property type="term" value="F:dipeptidyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070008">
        <property type="term" value="F:serine-type exopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="entry name" value="alpha/beta hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008758">
        <property type="entry name" value="Peptidase_S28"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010">
        <property type="entry name" value="PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11010:SF11">
        <property type="entry name" value="THYMUS-SPECIFIC SERINE PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05577">
        <property type="entry name" value="Peptidase_S28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW28109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="60" mass="6842" checksum="C7A44E7A800F8FE9" modified="2014-02-19" version="1" fragment="single">VLAKKFGAALVSLEHRYYGKSSPFNSLETENLKYLSSKQALSDLAAFRQYYQVSYSVFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CF82</accession>
    <name>V7CF82_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Nuclear pore complex protein NUP58</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_002G022500g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
            <location evidence="1">Nuclear pore complex</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CF82"/>
    <dbReference type="STRING" id="3885.V7CF82"/>
    <dbReference type="Gramene" id="ESW28842">
        <property type="protein sequence ID" value="ESW28842"/>
        <property type="gene ID" value="PHAVU_002G022500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QR16">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="NYSTKWA"/>
    <dbReference type="OrthoDB" id="2538017at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005643">
        <property type="term" value="C:nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008139">
        <property type="term" value="F:nuclear localization sequence binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017056">
        <property type="term" value="F:structural constituent of nuclear pore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051028">
        <property type="term" value="P:mRNA transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.140.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024882">
        <property type="entry name" value="NUP58/p45/49"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13437">
        <property type="entry name" value="NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13437:SF2">
        <property type="entry name" value="NUCLEOPORIN P58_P45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0509">mRNA transport</keyword>
    <keyword evidence="6" id="KW-0906">Nuclear pore complex</keyword>
    <keyword evidence="7" id="KW-0539">Nucleus</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="169"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="316"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="450"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="9"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="8">
        <location>
            <begin position="171"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="316"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="464"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW28842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="11">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="473" mass="51497" checksum="AFCB17FFC0A0C3E6" modified="2014-02-19" version="1">MSFSLFATPQQQQQPQPQQSPFQPQQTSLFLPQSQQQQFQPQQQQQQPQQAQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKTLLQELMSNVKDMLRNTEVAVRSFMILRPRFHHPSGGSSSATAPSQTPGVTMAPGSSGQPINASIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSSLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSSYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAVLPAPQTSAATSSLSSGSGFSLFSTPASAPSSSMLSSLFTTPTPAPVPQTSLFGSATSVPGPASTPSLFGNTTPLFSTTPATNSLFSTPFGSGAATGSGASFGPGSKNPRAKSRTARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="47" xmlns="https://uniprot.org/uniprot">
    <accession>V7CHM7</accession>
    <name>V7CHM7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SCP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G024400g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW28863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CHM7"/>
    <dbReference type="SMR" id="V7CHM7"/>
    <dbReference type="Gramene" id="ESW28863">
        <property type="protein sequence ID" value="ESW28863"/>
        <property type="gene ID" value="PHAVU_002G024400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3017">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LTICFYF"/>
    <dbReference type="OrthoDB" id="337038at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd05381">
        <property type="entry name" value="CAP_PR-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.33.10:FF:000004">
        <property type="entry name" value="CAP, cysteine-rich secretory protein, antigen 5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001283">
        <property type="entry name" value="CRISP-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10334">
        <property type="entry name" value="CYSTEINE-RICH SECRETORY PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00837">
        <property type="entry name" value="V5TPXLIKE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00198">
        <property type="entry name" value="SCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="PR-1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004757782" description="SCP domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="SCP" evidence="2">
        <location>
            <begin position="39"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW28863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="179" mass="19615" checksum="0137D32D6295C022" modified="2014-02-19" version="1">MDIFHHFSFSLASLLTFVILVHAATAPPNSPPPLPPLTAAASEYLEAHNEARAAVGVEPLRWSEKLGNASSLMVRYQRNKMGCEFANLTDSKYGGNQLWAGVTAVAPRVAVEEWVKEKEFYVRANNTCVGKHECGVYTQVVWRNSTEVGCAEAACVKEHSSLTICFYDPPGNVIGENPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CJR4</accession>
    <name>V7CJR4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">F-box domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G082800g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CJR4"/>
    <dbReference type="STRING" id="3885.V7CJR4"/>
    <dbReference type="Gramene" id="ESW29593">
        <property type="protein sequence ID" value="ESW29593"/>
        <property type="gene ID" value="PHAVU_002G082800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWH8">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VCCRSIF"/>
    <dbReference type="OrthoDB" id="626202at2759"/>
    <dbReference type="PhylomeDB" id="V7CJR4"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="CDD" id="cd22157">
        <property type="entry name" value="F-box_AtFBW1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR055290">
        <property type="entry name" value="At3g26010-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056592">
        <property type="entry name" value="Beta-prop_At3g26010-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017451">
        <property type="entry name" value="F-box-assoc_interact_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036047">
        <property type="entry name" value="F-box-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001810">
        <property type="entry name" value="F-box_dom"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01640">
        <property type="entry name" value="F_box_assoc_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35546:SF21">
        <property type="entry name" value="F-BOX DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35546">
        <property type="entry name" value="F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF24750">
        <property type="entry name" value="b-prop_At3g26010-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00646">
        <property type="entry name" value="F-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00256">
        <property type="entry name" value="FBOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81383">
        <property type="entry name" value="F-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F-box" evidence="2">
        <location>
            <begin position="44"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW29593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="434" mass="50163" checksum="437155F27BBB9519" modified="2014-02-19" version="1">MLNFLNPAKEVSGRPSSSLALREEEREKKMEVTAQKMKKANLFIHSDALTEILSRVPAKELLTLKLVCKEWHRVITSRSFAKTQLGTTEVVLTGFILQEKFKWCNDDIKIVSYIFVEKMARGGSKVNLTVFDFLPEDVVMLASCKGLVCCRSCFPSEKPFIYVCNPWRREWVKLEWPWLTSKYEISNSQRNTALALALDFDPSKGFVETFKLVRVKQVEVERDEDDDEQEGKLYFTFELYSSEIGAWWKSNETCQCYSKWVNNEGIYIGGVLHWLNGYGVLTFDVENELSWLVPAPVPVSEFMAVPEVCIGESEGRLHYVVVSEQGVHVWCLEDCYEYRWILMYCKSLEEIEGEWPQSFINLKEHMLERVNGPWVKPLAFKDGLLLMKCVYLYLFDVKNNKMAQACSLQDLKSQCMFKPTVLAHSLSLVPFNTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK13</accession>
    <name>V7CK13_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_002G1610000g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK13"/>
    <dbReference type="STRING" id="3885.V7CK13"/>
    <dbReference type="Gramene" id="ESW30537">
        <property type="protein sequence ID" value="ESW30537"/>
        <property type="gene ID" value="PHAVU_002G1610000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0737">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KMEHEML"/>
    <dbReference type="OrthoDB" id="1735986at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005741">
        <property type="term" value="C:mitochondrial outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051701">
        <property type="entry name" value="Mito_OM_Translocase_MSP1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45644">
        <property type="entry name" value="AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45644:SF85">
        <property type="entry name" value="P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW30537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="183" mass="20439" checksum="6738CA3A3765D0B4" modified="2014-02-19" version="1" fragment="single">MEQKNILLSALSVGVGVGVGIGLSSGQWGFNANSSSNGVTPENLEHEMLRLVVDGRESKVTFDQFPFYLREQTRVMLTNAAYVHLKHAEVSKFTRNLAPASRTIMLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQNRYGSANKQSSFKRSTSETTLERLSDLFESFSIFPQKEESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CK42</accession>
    <name>V7CK42_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RING-type E3 ubiquitin transferase</fullName>
            <ecNumber evidence="3">2.3.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_002G092600g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.</text>
            <dbReference type="EC" id="2.3.2.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein ubiquitination.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CK42"/>
    <dbReference type="SMR" id="V7CK42"/>
    <dbReference type="Gramene" id="ESW29713">
        <property type="protein sequence ID" value="ESW29713"/>
        <property type="gene ID" value="PHAVU_002G092600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0167">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YKQHSCP"/>
    <dbReference type="OrthoDB" id="7537227at2759"/>
    <dbReference type="UniPathway" id="UPA00143"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061630">
        <property type="term" value="F:ubiquitin protein ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16664">
        <property type="entry name" value="RING-Ubox_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000343">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.10.10:FF:000698">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.40.10:FF:000335">
        <property type="entry name" value="RING-type E3 ubiquitin transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="entry name" value="Leucine-rich Repeat Variant"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.40.10">
        <property type="entry name" value="Zinc/RING finger domain, C3HC4 (zinc finger)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR058678">
        <property type="entry name" value="ARM_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000225">
        <property type="entry name" value="Armadillo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR057623">
        <property type="entry name" value="PUB12-19-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045210">
        <property type="entry name" value="RING-Ubox_PUB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003613">
        <property type="entry name" value="Ubox_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013083">
        <property type="entry name" value="Znf_RING/FYVE/PHD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315">
        <property type="entry name" value="U BOX DOMAIN-CONTAINING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23315:SF52">
        <property type="entry name" value="U-BOX DOMAIN-CONTAINING PROTEIN 10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25598">
        <property type="entry name" value="ARM_PUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25368">
        <property type="entry name" value="PUB10_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04564">
        <property type="entry name" value="U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00185">
        <property type="entry name" value="ARM"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SMART" id="SM00504">
        <property type="entry name" value="Ubox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="ARM repeat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57850">
        <property type="entry name" value="RING/U-box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50176">
        <property type="entry name" value="ARM_REPEAT"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51698">
        <property type="entry name" value="U_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="U-box" evidence="9">
        <location>
            <begin position="276"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="7">
        <location>
            <begin position="375"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="7">
        <location>
            <begin position="417"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="7">
        <location>
            <begin position="458"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="repeat" description="ARM" evidence="7">
        <location>
            <begin position="499"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="213"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="213"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW29713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="656" mass="71533" checksum="F5DAC56DDA7AA478" modified="2014-02-19" version="1">MAGELAGDHTPELLCLVHDIAGMCPGSSSATPIAADALFRKDCTDLVRRISLLTHLFEEIRELNNNNNNSYNVVPSASSSSSSSSAASWSSDLVLALHSARSLLSVARNFRSNCSSDGAAKTIVFQFQCVTWKLEKLLSNLSYDNLDISEEVKEQVDLVRTQLKRATEKYGFMISKMPSHELSQPLTEEISQVLAKSVGGLYKQHSCPENLSELDSISKNNGENNSSTNRAGSRLERARSIHASSEVFFLNESDPESQEISETKSLPEVKKPEAIVIPEDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNTTCPKTQQKLQHLTLTPNYVLRSLIYQWCIEHNIEQPTGLTNGKIKKSDGSFRDVTGDIAAIEALVRKLSSRSVEERRAAVTEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVLTQDNAVTSILNLSIYENNKGLIMLAGAIPSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGASGAIPALVELLQNGSPRGKKDAATALFNLCIYQGNKGRAIRAGIITALLKMLTDSSKSMVDEALTIMSVLASHQEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLALCKRDADNLACISRLGAVIPLSELARTGTERAKRKATSLLEHLRKLQQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7CKU0</accession>
    <name>V7CKU0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">SBP-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">PHAVU_002G114500g</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="8" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CKU0"/>
    <dbReference type="SMR" id="V7CKU0"/>
    <dbReference type="STRING" id="3885.V7CKU0"/>
    <dbReference type="Gramene" id="ESW29973">
        <property type="protein sequence ID" value="ESW29973"/>
        <property type="gene ID" value="PHAVU_002G114500g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW29974">
        <property type="protein sequence ID" value="ESW29974"/>
        <property type="gene ID" value="PHAVU_002G114500g"/>
    </dbReference>
    <dbReference type="OMA" id="MDNIGKQ"/>
    <dbReference type="OrthoDB" id="514967at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1100.10">
        <property type="entry name" value="Transcription factor, SBP-box domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044817">
        <property type="entry name" value="SBP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004333">
        <property type="entry name" value="SBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036893">
        <property type="entry name" value="SBP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31251">
        <property type="entry name" value="SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31251:SF226">
        <property type="entry name" value="SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03110">
        <property type="entry name" value="SBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103612">
        <property type="entry name" value="SBT domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51141">
        <property type="entry name" value="ZF_SBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="SBP-type" evidence="6">
        <location>
            <begin position="44"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="ESW29973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="125" mass="13983" checksum="FB465FDDE2DCB85B" modified="2014-02-19" version="1">MDNGDDKEESSEGEAENGAKMVQKITIMLVCGNGKGSRTGSSSSSFCQADECGVKLNMAKRYNRRHKVCERHSKAPVVLVSSIRQRFCQQCSKFHELAEFDETKRSCRKTLARRKTRTDMSLGGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL15</accession>
    <name>V7CL15_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">VQ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G189900g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL15"/>
    <dbReference type="STRING" id="3885.V7CL15"/>
    <dbReference type="Gramene" id="ESW30877">
        <property type="protein sequence ID" value="ESW30877"/>
        <property type="gene ID" value="PHAVU_002G189900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S40B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ATADQCM"/>
    <dbReference type="OrthoDB" id="1726347at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008889">
        <property type="entry name" value="VQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039609">
        <property type="entry name" value="VQ_15/22"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179:SF29">
        <property type="entry name" value="OS06G0666400 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33179">
        <property type="entry name" value="VQ MOTIF-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05678">
        <property type="entry name" value="VQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VQ" evidence="1">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW30877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="217" mass="24323" checksum="C280D4FAEACCDE24" modified="2014-02-19" version="1">MAATDHDHCMEFDQQFLVDDLDPFIEGFMDTTTCMSSPKSMMISPRNSSHNNTTSGHHLTPKASAFKPIRRRSRASKTTPITLLKANTSNFRALVQQFTGSSTTPMSLAIHKGPITLNFQQGTKQQIQHHTREATRLVPQFGTMISSNQVHQVSKPQQHLIMREQQSGYWLEHVKTSDLCLPTSGSCMDDGFGFDDDFSLHELSVNATSNDIQGFFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="63" xmlns="https://uniprot.org/uniprot">
    <accession>V7CL28</accession>
    <name>V7CL28_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Glutamate decarboxylase</fullName>
            <ecNumber evidence="3 11">4.1.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_002G186000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 11">
            <text>L-glutamate + H(+) = 4-aminobutanoate + CO2</text>
            <dbReference type="Rhea" id="RHEA:17785"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:59888"/>
            <dbReference type="EC" id="4.1.1.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9 10">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the group II decarboxylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.15" evidence="3 11"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CL28"/>
    <dbReference type="SMR" id="V7CL28"/>
    <dbReference type="STRING" id="3885.V7CL28"/>
    <dbReference type="Gramene" id="ESW30829">
        <property type="protein sequence ID" value="ESW30829"/>
        <property type="gene ID" value="PHAVU_002G186000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1383">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PAKYKMP"/>
    <dbReference type="OrthoDB" id="5152799at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005516">
        <property type="term" value="F:calmodulin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004351">
        <property type="term" value="F:glutamate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006538">
        <property type="term" value="P:L-glutamate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.640.10:FF:000022">
        <property type="entry name" value="Glutamate decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.1150.160:FF:000001">
        <property type="entry name" value="Glutamate decarboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="entry name" value="Type I PLP-dependent aspartate aminotransferase-like (Major domain)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010107">
        <property type="entry name" value="Glutamate_decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002129">
        <property type="entry name" value="PyrdxlP-dep_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01788">
        <property type="entry name" value="Glu-decarb-GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43321">
        <property type="entry name" value="GLUTAMATE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43321:SF3">
        <property type="entry name" value="GLUTAMATE DECARBOXYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00282">
        <property type="entry name" value="Pyridoxal_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="PLP-dependent transferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0112">Calmodulin-binding</keyword>
    <keyword evidence="4 11" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="7 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 9 10" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="9">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00048868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR602129-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW30829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="462" mass="52430" checksum="D1FBA7ADD8EE8D31" modified="2014-02-19" version="1">MPEDSMPKEAAYQNIHDELQLDAIPMLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCLNMIARLFHAEIGENENAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKSYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETGIHVDGASGGFIAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRNKEELPQDLIFHINYLGAHQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAKVVKENLEKSGRFNIVSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLAFDIHNVLNELEKVHAPIMINSSEEENKGLVETGVKETALDAPRAIIVQESNKRQKIMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CLE5</accession>
    <name>V7CLE5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G090700g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW29691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CLE5"/>
    <dbReference type="STRING" id="3885.V7CLE5"/>
    <dbReference type="Gramene" id="ESW29691">
        <property type="protein sequence ID" value="ESW29691"/>
        <property type="gene ID" value="PHAVU_002G090700g"/>
    </dbReference>
    <dbReference type="OMA" id="MCADEMG"/>
    <dbReference type="OrthoDB" id="1433347at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="entry name" value="Ribonuclease H-like superfamily/Ribonuclease H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1000.10">
        <property type="entry name" value="Zinc finger, CCCH-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR053151">
        <property type="entry name" value="RNase_H-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002156">
        <property type="entry name" value="RNaseH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47723">
        <property type="entry name" value="OS05G0353850 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47723:SF19">
        <property type="entry name" value="POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13456">
        <property type="entry name" value="RVT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18345">
        <property type="entry name" value="zf_CCCH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="Ribonuclease H-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 4" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="5">
        <location>
            <begin position="43"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="4">
        <location>
            <begin position="43"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW29691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="228" mass="25998" checksum="B8E1A3355BB8D917" modified="2014-02-19" version="1">MMELVSGNETIPTYQYWLNEGCNRHHQRFSYSKTSKTSVKTCLKSSITCKYWINGNCMYGDQCRNLHSWSVSEKTSIGMKNTVKEDNIRPSRLIWWRPPFEGFVKINCDGAFTMHGNKAGAGGVGYKNLMVESDSKVAIDIITSFVVQQRNDDTRQSQDVISSIMEISKTANMIYLNHVFREVNAAADGLAKHGLSLCPEQGVKVFEDPPYFIESHLYLDRTGKIYRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="64" xmlns="https://uniprot.org/uniprot">
    <accession>V7CME5</accession>
    <name>V7CME5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="18">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_002G160700g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RBOH (TC 5.B.1.3) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CME5"/>
    <dbReference type="SMR" id="V7CME5"/>
    <dbReference type="STRING" id="3885.V7CME5"/>
    <dbReference type="Gramene" id="ESW30533">
        <property type="protein sequence ID" value="ESW30533"/>
        <property type="gene ID" value="PHAVU_002G160700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0039">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HLQTTWM"/>
    <dbReference type="OrthoDB" id="167398at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016174">
        <property type="term" value="F:NAD(P)H oxidase H2O2-forming activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00051">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06186">
        <property type="entry name" value="NOX_Duox_like_FAD_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.238.10:FF:000049">
        <property type="entry name" value="Respiratory burst oxidase homolog A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000019">
        <property type="entry name" value="Respiratory burst oxidase homolog A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.80:FF:000007">
        <property type="entry name" value="Respiratory burst oxidase protein A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000778">
        <property type="entry name" value="Cyt_b245_heavy_chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013112">
        <property type="entry name" value="FAD-bd_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013121">
        <property type="entry name" value="Fe_red_NAD-bd_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013623">
        <property type="entry name" value="NADPH_Ox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050369">
        <property type="entry name" value="RBOH/FRE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972">
        <property type="entry name" value="NADPH OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972:SF153">
        <property type="entry name" value="SUPEROXIDE-GENERATING NADPH OXIDASE HEAVY CHAIN SUBUNIT A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08022">
        <property type="entry name" value="FAD_binding_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08030">
        <property type="entry name" value="NAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08414">
        <property type="entry name" value="NADPH_Ox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00466">
        <property type="entry name" value="GP91PHOX"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01169">
        <property type="entry name" value="NADPH_oxidase_subgroup_(NOX)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0106">Calcium</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="13 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0521">NADP</keyword>
    <keyword evidence="12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="364"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="504"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="545"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="571"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="724"/>
            <end position="741"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="16">
        <location>
            <begin position="241"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="17">
        <location>
            <begin position="598"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="66"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="760"/>
            <end position="782"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="79"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="14">
        <location>
            <begin position="760"/>
            <end position="780"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW30533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="926" mass="105660" checksum="4E71BDC38DEBF2EA" modified="2014-02-19" version="1">MNAAPKHERRWASDTVPEIAFVSGATSPGTESCSVADEYVEVTLDVQDDHTVVLRGVEPVTVVNVDDGYAPSGNETPVSSAWSPSIRRSSPNPWRQFSQELKAEAVAKARQFSQELKAELRRFPWSQGGSETALVRRDIRKQRAQLERNRSGTMKALRGLKFISSKSNGVDAWNQVQSSFDSLAKDGFLYRTDFAQCIGMKDSKEFALELFDALGRRRRLSVEKISRDELSEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQIRGRSPIRRMSRRVMYYLQENWRRLWILAVWVSVMIGLFTWKFMDYKRKNAYHVMGYCLLAAKGAAETLKFNMALILFPVCRNTITWLRSTNLAYIAPFDDNINFHKTIAAAVLIGVILHAGNHLACDFPRLVNSSEEIYEKYLNGVFGDHKPGYGDLIKGVEGVTGILMVILMAIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIVHGVNLYLERKWHLQTTWMYLAVPIVLYLGERTLRFFRSGFYTVRLIKVAIYTGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELRKVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADLVSDSSRGSDLSTGSSDSPSFSKISPKRKKTLKTTNSYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDVVSGTRVRTHFARPNWKKVFSRICSKHSNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CMP0</accession>
    <name>V7CMP0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase</fullName>
            <ecNumber evidence="13">4.6.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_002G159900g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP</text>
            <dbReference type="Rhea" id="RHEA:23864"/>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
            <dbReference type="ChEBI" id="CHEBI:58483"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="4.6.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 4/6.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 13">Belongs to the IspF family.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.12" evidence="13"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CMP0"/>
    <dbReference type="SMR" id="V7CMP0"/>
    <dbReference type="STRING" id="3885.V7CMP0"/>
    <dbReference type="Gramene" id="ESW30525">
        <property type="protein sequence ID" value="ESW30525"/>
        <property type="gene ID" value="PHAVU_002G159900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QS77">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="LIHAIMD"/>
    <dbReference type="OrthoDB" id="2015434at2759"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008685">
        <property type="term" value="F:2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00554">
        <property type="entry name" value="MECDP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.50:FF:000002">
        <property type="entry name" value="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.50">
        <property type="entry name" value="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00107">
        <property type="entry name" value="IspF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003526">
        <property type="entry name" value="MECDP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020555">
        <property type="entry name" value="MECDP_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036571">
        <property type="entry name" value="MECDP_synthase_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00151">
        <property type="entry name" value="ispF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43181">
        <property type="entry name" value="2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43181:SF1">
        <property type="entry name" value="2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02542">
        <property type="entry name" value="YgbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69765">
        <property type="entry name" value="IpsF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01350">
        <property type="entry name" value="ISPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="11 13" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="12 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" evidence="14">
        <location>
            <begin position="77"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW30525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="233" mass="24871" checksum="E10CF9FB55F77FFD" modified="2014-02-19" version="1">MAMAATSSTASSILLPFTTNPKTSHLFASFPCKNNTLLPSLRLRHISASTSASATPTPSIQVDKSPVSAAPSKVLPFRIGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCASSVFIHESVRLMHEAGYEIGNLDATLILQRPKLSPHKDTIKANLSALLGVDSSVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CN14</accession>
    <name>V7CN14_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ubiquitin carboxyl-terminal hydrolase</fullName>
            <ecNumber evidence="8">3.4.19.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_002G141300g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).</text>
            <dbReference type="EC" id="3.4.19.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the peptidase C19 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.19.12" evidence="8"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW30296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CN14"/>
    <dbReference type="SMR" id="V7CN14"/>
    <dbReference type="STRING" id="3885.V7CN14"/>
    <dbReference type="Gramene" id="ESW30296">
        <property type="protein sequence ID" value="ESW30296"/>
        <property type="gene ID" value="PHAVU_002G141300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1865">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TWHKMDD"/>
    <dbReference type="OrthoDB" id="420187at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004843">
        <property type="term" value="F:cysteine-type deubiquitinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016579">
        <property type="term" value="P:protein deubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="3.90.70.10:FF:000116">
        <property type="entry name" value="Ubiquitin carboxyl-terminal hydrolase 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.70.10">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050164">
        <property type="entry name" value="Peptidase_C19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001394">
        <property type="entry name" value="Peptidase_C19_UCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028889">
        <property type="entry name" value="USP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018200">
        <property type="entry name" value="USP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24006:SF747">
        <property type="entry name" value="UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00443">
        <property type="entry name" value="UCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="Cysteine proteinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00972">
        <property type="entry name" value="USP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00973">
        <property type="entry name" value="USP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50235">
        <property type="entry name" value="USP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 8" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0788">Thiol protease</keyword>
    <keyword evidence="4 8" id="KW-0833">Ubl conjugation pathway</keyword>
    <feature type="domain" description="USP" evidence="10">
        <location>
            <begin position="131"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="589"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="659"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="603"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="659"/>
            <end position="669"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00037450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW30296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="699" mass="77330" checksum="EF23DF4CCE69FAFE" modified="2014-02-19" version="1">MCFSLSSPAKSAEGPMEVSPATNFFPQPLCPSESVGGCCDHSGQLSAVGQSTLPVGYGVGGEGADQEDSNTASQFRQLNNDSTLPLASCSPVSAVAPESWVPNQGNWLLDENEGSMGAESVYEFGPSNMGAGLSNLGNTCFLNAILQCFTHTVPLVQGIRACTHNFPCAGHMDRFCVICTFRDQVERSLAASGRTLSPLKFVNNLSYFSSGFRRYQQEDAHEFMQCALDKLERCFLDLKKTDLNFEGDNLVQKVFGGRLISKLQCCSCGRTSDTYEPLIDMSLEIENVDSLPSALESFTKVEKIDANFRCDSCKEEVSMEKQLMLDMTPSVAAFHLKRFKADGILVEKIDKHIEFPLELDLQPYTISNQNNDVLVKYDLYAIVVHTGFSSTSGHYFCFVRSGPDTWHKLDDLMVTEVSGDSVLSQEAYILFYARQGTPWFSSIMESQKQCLDPNISSTSPTSVLDVGDGISKSNPNLIPSTERGGAGESKGCSEPRFDYFIPDERTFTEINDAKDATHSCGQFLCEPNQESVYFLSSSKDVETQFRNRVTLDGRSMFDGKSYTENASLDNNYDCEEVVDFRESAGACSLSLPPPPLTSPLDNASDKFRTSRDNSKKESKQSRKRPVNQCNENPERREAVKYLNKTGPRREALLKYVARDEVSDKRKKMDSLQCKKTTSLDRKKSNQTSVSRPVAAGISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="29" xmlns="https://uniprot.org/uniprot">
    <accession>V7CNL7</accession>
    <name>V7CNL7_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G268100g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CNL7"/>
    <dbReference type="SMR" id="V7CNL7"/>
    <dbReference type="Gramene" id="ESW31792">
        <property type="protein sequence ID" value="ESW31792"/>
        <property type="gene ID" value="PHAVU_002G268100g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SDD6">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HCLMITE"/>
    <dbReference type="OrthoDB" id="1739516at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="109" mass="12547" checksum="4DD3C801FBAF0A91" modified="2014-02-19" version="1">MAETPSSSLRKGKNMKDHNFMISESEVEAEQNLMQLKDEEERHSIRGSKRSRSKGDESLSDIIMAKIQEIFGNDIEVFPTKKQRRYRSLVSIYMVTRPVNAANDTRVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="50" xmlns="https://uniprot.org/uniprot">
    <accession>V7CPA0</accession>
    <name>V7CPA0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycosyltransferase</fullName>
            <ecNumber evidence="5">2.4.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_002G214400g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the UDP-glycosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CPA0"/>
    <dbReference type="SMR" id="V7CPA0"/>
    <dbReference type="STRING" id="3885.V7CPA0"/>
    <dbReference type="Gramene" id="ESW31158">
        <property type="protein sequence ID" value="ESW31158"/>
        <property type="gene ID" value="PHAVU_002G214400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1192">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="TINVPWI"/>
    <dbReference type="OrthoDB" id="5835829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047213">
        <property type="term" value="F:anthocyanidin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080043">
        <property type="term" value="F:quercetin 3-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080044">
        <property type="term" value="F:quercetin 7-O-glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033485">
        <property type="term" value="P:cyanidin 3-O-glucoside biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031542">
        <property type="term" value="P:positive regulation of anthocyanin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000060">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.2000:FF:000129">
        <property type="entry name" value="Glycosyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2000">
        <property type="entry name" value="Glycogen Phosphorylase B"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035595">
        <property type="entry name" value="UDP_glycos_trans_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926">
        <property type="entry name" value="GLUCOSYL/GLUCURONOSYL TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11926:SF1560">
        <property type="entry name" value="UDP-GLYCOSYLTRANSFERASE 74E1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53756">
        <property type="entry name" value="UDP-Glycosyltransferase/glycogen phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00375">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW31158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="449" mass="49570" checksum="FE7751E28CBBE82B" modified="2014-02-19" version="1">MSNSMEHKHVAVFPFPFGTHSLPLFNLVLKLAQASPNCSFSFISTEKSNSSHFPKPYIPDNIKPYTISDGIPSGHEALANHPIEKVNLFLQTGPQNLHKGIKMAQAYTKKRVTCIIADAFLSYSFFVSQTINVPWIAFWPPISCSLSVYFYIDLILEIAHRAGNVTLDSVPGMSKIRIEDMPQDLLISGRKQTVFSRTLISVGKVLPQAKAVVMNFFEELDPPLFIQDMRSKLRSLLYVAPLSTPLWPTSPTDSSGCLPWLDTMRSKSVIYLCFGTVVGLPPQEVEELAGALEESNIPFLWSRLEGVVGALPNGFVERTKMLGKIVSWAPQVQVLAHDSVGVFVSNCGASSLMESVYGGVPMICRPFFGDQGIAARVVEDVWEIGVGMEGKVFTKKGFLESLNLIMGTEKGKKFRENALKMKRAVQDAARPEGKSTQDFNTLLEIVSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CQP6</accession>
    <name>V7CQP6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_002G222200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CQP6"/>
    <dbReference type="SMR" id="V7CQP6"/>
    <dbReference type="STRING" id="3885.V7CQP6"/>
    <dbReference type="Gramene" id="ESW31246">
        <property type="protein sequence ID" value="ESW31246"/>
        <property type="gene ID" value="PHAVU_002G222200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2919">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IRTWILP"/>
    <dbReference type="OrthoDB" id="239865at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="entry name" value="YVTN repeat-like/Quinoprotein amine dehydrogenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051150">
        <property type="entry name" value="SWT21/TCAB1_mRNA_Telomere"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13211">
        <property type="entry name" value="TELOMERASE CAJAL BODY PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13211:SF0">
        <property type="entry name" value="TELOMERASE CAJAL BODY PROTEIN 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="WD40 repeat-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW31246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="414" mass="46520" checksum="B6CB9B0D18078944" modified="2014-02-19" version="1">MEEENVVQSESNEANTNTNEEYSFPALRFEVSPHRTYHFHRQFITPSNPNNFHKAVKWSPDGSCFLTSSEDNTLRLFAPPGTESEAPVAASDDDSFAANVVMHEGESIHDFCWYPYMSSSDLVTNVFATTTRDHPIHLWDATSGQLRCTYRAYDAMDEITAAFSIAFNPAGNKIFAGYNKCIRMFDLHRPGRDFELYSTVKDKKEGQTGIISAVAFSPFHSGMLALGSYSQTAAIYREDNMEQLYLLHGQEGGITHVQFSKDGNYLYTGGRKDPYILCWDVRKSVDCVYKLYRSSENTNQRILFDIDPSGQHLGTGGQDGLVHIYDLKTGQWVSSFEAALDTVNGFSFHPFLPHAVSSSGHRRFVIPDDGDEELCLSGRENCVSVWTFCCDSMMDDDMKSNGSFNNQSESGYLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7CRE5</accession>
    <name>V7CRE5_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">PHAVU_002G279700g</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RBOH (TC 5.B.1.3) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002289">
        <property type="protein sequence ID" value="ESW31928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CRE5"/>
    <dbReference type="SMR" id="V7CRE5"/>
    <dbReference type="STRING" id="3885.V7CRE5"/>
    <dbReference type="Gramene" id="ESW31928">
        <property type="protein sequence ID" value="ESW31928"/>
        <property type="gene ID" value="PHAVU_002G279700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0039">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YGYIMIE"/>
    <dbReference type="OrthoDB" id="167398at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 2"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016174">
        <property type="term" value="F:NAD(P)H oxidase H2O2-forming activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06186">
        <property type="entry name" value="NOX_Duox_like_FAD_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.40.30.10:FF:000019">
        <property type="entry name" value="Respiratory burst oxidase homolog A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.80:FF:000007">
        <property type="entry name" value="Respiratory burst oxidase protein A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="entry name" value="Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.10">
        <property type="entry name" value="Translation factors"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000778">
        <property type="entry name" value="Cyt_b245_heavy_chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013112">
        <property type="entry name" value="FAD-bd_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013121">
        <property type="entry name" value="Fe_red_NAD-bd_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013623">
        <property type="entry name" value="NADPH_Ox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050369">
        <property type="entry name" value="RBOH/FRE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972">
        <property type="entry name" value="NADPH OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11972:SF145">
        <property type="entry name" value="RESPIRATORY BURST OXIDASE-LIKE PROTEIN D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08022">
        <property type="entry name" value="FAD_binding_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08030">
        <property type="entry name" value="NAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08414">
        <property type="entry name" value="NADPH_Ox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00466">
        <property type="entry name" value="GP91PHOX"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01169">
        <property type="entry name" value="NADPH_oxidase_subgroup_(NOX)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="Ferredoxin reductase-like, C-terminal NADP-linked domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="Riboflavin synthase domain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0106">Calcium</keyword>
    <keyword evidence="7" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0521">NADP</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="348"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="427"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="488"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="528"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="559"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="14">
        <location>
            <begin position="225"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="15">
        <location>
            <begin position="577"/>
            <end position="706"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="ESW31928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="899" mass="101791" checksum="A1F8A0ACC3DD9262" modified="2014-02-19" version="1">MGGASADLHQLESDIELTHAERTDTKLGASESKAANDVGLDSGIKSQAEAEGHFVEVTMDIHGDSVALHSVKAFGGVDVVEEEGEKLGLTGKRFEKKKSFSASVVQSAAIRMKQLKRLTSFSKPAPKHFERTKSAVAHALTGLKFISTTDGGEGWIKAEGRFKKFVGADGYLPRARFAECLGLNKESEAYAEKLFDTLARQRGIQGGSINHIQFKEFWDNISDQSFDARLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSIIQKQAEEYAALIMEELDPDDSKYIMIDDLETLLLHGPEETTRGESKNLSRMLSQKLKPTYVDNTIMKWYRDGRYFFLDNWRRSWVLVLWIGVMLGLFAYKFVQYRRKAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHMVIAVAIAFGVGVHAIYHLSCDFPRLLHASDEKYKLMEPFFGERPSDYWYFVKSWEGVTGIIMIVLMAIAFTLANPAFRRGRTKLPKPFDKLTGFNAFWYSHHLFVFVYALLVVHGIKLYLTTEWYKKTTWMYLAVPITIYALERLTRALRSSIKSVKILKVTLYPGNVLSLQMSKPQGFTYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKIVGDWTRSLKTKFSQACQQPLNGQSGLLRAECLKEDNSSVSFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISIVKDMVKMLKEIEEEEERGMEEGAAGAVKSDDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRKKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPDWRNVFKRIALNHPHGRVGVFYCGPSNLTRELRQLSLDFSHNTSTKFDFHKENF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="36" xmlns="https://uniprot.org/uniprot">
    <accession>V7CSI8</accession>
    <name>V7CSI8_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">PHAVU_001G043500g</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GLUTAMINE DUMPER 1 (TC 9.B.60) family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CSI8"/>
    <dbReference type="STRING" id="3885.V7CSI8"/>
    <dbReference type="Gramene" id="ESW33104">
        <property type="protein sequence ID" value="ESW33104"/>
        <property type="gene ID" value="PHAVU_001G043500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4AK">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EQHIITW"/>
    <dbReference type="OrthoDB" id="1930784at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080143">
        <property type="term" value="P:regulation of amino acid export"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040359">
        <property type="entry name" value="GDU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33228:SF77">
        <property type="entry name" value="PROTEIN GLUTAMINE DUMPER 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33228">
        <property type="entry name" value="PROTEIN GLUTAMINE DUMPER 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="47"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="ESW33104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="180" mass="19986" checksum="05FE86ADD9D179E5" modified="2014-02-19" version="1">MRSFPKLDPLAPTSSTVEMVTATTTSSSTSSSPTSPIVSPWHSPIPYLFGGLAIIMALISMALFILACSYWRLTRSSHQRDLENVNTSSNKEGDDDPQQKEHPLVYEEKILVIMAGDHQPTFLATPSSTTSFHKHLGNCENFDMSQTEISDNYHVGVVVSDENENGSSHRHNEQHIITWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7CUR6</accession>
    <name>V7CUR6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">S-acyltransferase</fullName>
            <ecNumber evidence="8">2.3.1.225</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Palmitoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_001G108600g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>L-cysteinyl-[protein] + hexadecanoyl-CoA = S-hexadecanoyl-L-cysteinyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:36683"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11032"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57379"/>
            <dbReference type="ChEBI" id="CHEBI:74151"/>
            <dbReference type="EC" id="2.3.1.225"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endomembrane system</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The DHHC domain is required for palmitoyltransferase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the DHHC palmitoyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.225" evidence="8"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CUR6"/>
    <dbReference type="SMR" id="V7CUR6"/>
    <dbReference type="Gramene" id="ESW33912">
        <property type="protein sequence ID" value="ESW33912"/>
        <property type="gene ID" value="PHAVU_001G108600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1311">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YEQKWSM"/>
    <dbReference type="OrthoDB" id="4096362at2759"/>
    <dbReference type="PhylomeDB" id="V7CUR6"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005783">
        <property type="term" value="C:endoplasmic reticulum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005794">
        <property type="term" value="C:Golgi apparatus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019706">
        <property type="term" value="F:protein-cysteine S-palmitoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006612">
        <property type="term" value="P:protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001594">
        <property type="entry name" value="Palmitoyltrfase_DHHC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039859">
        <property type="entry name" value="PFA4/ZDH16/20/ERF2-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883:SF481">
        <property type="entry name" value="S-ACYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22883">
        <property type="entry name" value="ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01529">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50216">
        <property type="entry name" value="DHHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="244"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="Palmitoyltransferase DHHC" evidence="10">
        <location>
            <begin position="159"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="391"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="413"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU079119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW33912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="429" mass="48655" checksum="8F3DF898618ED58F" modified="2014-02-19" version="1">MAGNRNSEMGDSPSSNVGHQQKRVYEVWRGGNKFFCGGRMIFGPDVASLFLTTFLIAAPAITFCVKIYLQIKNTSDLTSEFWFPVVVVGAVLTVLDLMFLLMTSGRDPGIVPRNLRPPEFDDTFDIPTPSMEWINGTTPHLKLPRTKDVVVNGQVVKVKFCDTCLLYRPPRTSHCSICNNCVERFDHHCPWVGQCIGTRNYRYFFMFILTSTTLCLYVFVFTCVSISERNVWKTISRDYLSDFLIIYCFIAVWFVGGLTAFHFYLICTNQTTYENFRYQYDKKGNPFNRGSCRNINETLCSSAPPSKNDFRAFVVEDEHMMVRSLTPNIADGILTPKEKIDLEMGSMRAEDDEGQLSYDPFYSVEDDAKGSSRTSIATVLNFQSISEEGMEEYVQSSHAGGRVGESTQRHITSDGTYTNKETNGRNHSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVH9</accession>
    <name>V7CVH9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_001G130400g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the APC3/CDC27 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVH9"/>
    <dbReference type="SMR" id="V7CVH9"/>
    <dbReference type="STRING" id="3885.V7CVH9"/>
    <dbReference type="Gramene" id="ESW34167">
        <property type="protein sequence ID" value="ESW34167"/>
        <property type="gene ID" value="PHAVU_001G130400g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1126">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OrthoDB" id="329563at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005680">
        <property type="term" value="C:anaphase-promoting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031145">
        <property type="term" value="P:anaphase-promoting complex-dependent catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007091">
        <property type="term" value="P:metaphase/anaphase transition of mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016567">
        <property type="term" value="P:protein ubiquitination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558">
        <property type="entry name" value="CELL DIVISION CYCLE 16,23,27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12558:SF13">
        <property type="entry name" value="CELL DIVISION CYCLE PROTEIN 27 HOMOLOG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="3">
        <location>
            <begin position="100"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00038210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW34167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="157" mass="17772" checksum="DDE13B2A3D8391DA" modified="2014-02-19" version="1">MEVQTEASRGASRGKRRQTEVRAEVRVEANGGVSGGLNLMLGYFKQVGKVYFELVDYLEVDQAFSLPRQIMPYSLEGMDVYSTLLYLPGSGTGSTNRLTPQSWCAMGNCYSLQKDHETALKNFQRVVQLNPRFAYAHTLCGHEYDQCFCLYYIPKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="57" xmlns="https://uniprot.org/uniprot">
    <accession>V7CVI2</accession>
    <name>V7CVI2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="28">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="26" type="ORF">PHAVU_001G130800g</name>
    </gene>
    <organism evidence="26 27">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="27" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="27">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="17">
            <text>L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass type I membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="19">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CVI2"/>
    <dbReference type="SMR" id="V7CVI2"/>
    <dbReference type="STRING" id="3885.V7CVI2"/>
    <dbReference type="Gramene" id="ESW34172">
        <property type="protein sequence ID" value="ESW34172"/>
        <property type="gene ID" value="PHAVU_001G130800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQPF">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHPWISG"/>
    <dbReference type="OrthoDB" id="4062651at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030247">
        <property type="term" value="F:polysaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007166">
        <property type="term" value="P:cell surface receptor signaling pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00054">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd14066">
        <property type="entry name" value="STKc_IRAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.10.25.10:FF:000038">
        <property type="entry name" value="Fibrillin 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000084">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000043">
        <property type="entry name" value="Wall-associated receptor kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.25.10">
        <property type="entry name" value="Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000742">
        <property type="entry name" value="EGF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001881">
        <property type="entry name" value="EGF-like_Ca-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000152">
        <property type="entry name" value="EGF-type_Asp/Asn_hydroxyl_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045274">
        <property type="entry name" value="WAK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025287">
        <property type="entry name" value="WAK_GUB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005:SF470">
        <property type="entry name" value="ASSOCIATED KINASE-LIKE PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR27005">
        <property type="entry name" value="WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13947">
        <property type="entry name" value="GUB_WAK_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00181">
        <property type="entry name" value="EGF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00179">
        <property type="entry name" value="EGF_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57196">
        <property type="entry name" value="EGF/Laminin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00010">
        <property type="entry name" value="ASX_HYDROXYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50026">
        <property type="entry name" value="EGF_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11 20" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 19" id="KW-0245">EGF-like domain</keyword>
    <keyword evidence="15" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="13 22" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 20" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="27" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="7 23" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 22" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 22" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="23">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755840" description="Protein kinase domain-containing protein" evidence="23">
        <location>
            <begin position="27"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="22">
        <location>
            <begin position="354"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="EGF-like" evidence="25">
        <location>
            <begin position="299"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="Protein kinase" evidence="24">
        <location>
            <begin position="426"/>
            <end position="708"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="21">
        <location>
            <begin position="714"/>
            <end position="744"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="21">
        <location>
            <begin position="719"/>
            <end position="741"/>
        </location>
    </feature>
    <feature type="binding site" evidence="20">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00047558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00047951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00058961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="EMBL" id="ESW34172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="27">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="28">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="756" mass="83544" checksum="602B18BEAA251C44" modified="2014-02-19" version="1">MELKVLTQMQVTLLLLLIVLTRTGTAADDQDLLGCPNKCGDVSIPYPFGVGVSDITGKNCYLEKNLELNCTDSILYAGNVEVQNITLVGQMEMNFFVSSICKINISNGKNKSNTPTLQTASFTISSTDNKFVSIGCDTYGYLNSYVDQAKYSTGCLTRCDKNDPNVKNMQRNDGKCSGIGCCQVDIPPGMKNISIQASSFDDFKSFSGNSCSVSFVVKNGGYSFKMDHLKHIPFDKAPMVVDWTVGDGACNVSKNNDNYACTSNHSVCEDPPYANRNGYQCKCKQGFVGNPYLRTGCTDFLECTTGNHNCARDEYCHDIPGSFECLCPVGLTGKATNGGGGCQPKKEDDAFTKIVIGSGVGLIALFVGVSWLYLMHQKRRLLKLKEKFFQQNGGIILRQKLSARGETSQSATIFSVEELKKATNNFDESLIIGRGGFGTVFKGVLLNNEVVAIKKSKIMDSSQVEQFINEVIILSQINHRNVVKLFGCCLETEVPLLVYEFVENGTLFDYLHKQGQVPNVSWKTRLRIATEAAGALSYLHSEASIPIIHRDVKTANILLDESNTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSGQLTEKSDVYSFGVVLVELLSGEEPFSSHKTEEKRSLTFHFLSSLEKDSLIDVLENDILDEENKQEIMEVAILAARCLKLRGEERPSMKEVTMELEGIRHMDKHPWTNTSQDFEESQYLLSEPQSTPEHGYSSGQQSTGFDSLRELELINFGNGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7CWV8</accession>
    <name>V7CWV8_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G096300g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CWV8"/>
    <dbReference type="SMR" id="V7CWV8"/>
    <dbReference type="STRING" id="3885.V7CWV8"/>
    <dbReference type="Gramene" id="ESW33755">
        <property type="protein sequence ID" value="ESW33755"/>
        <property type="gene ID" value="PHAVU_001G096300g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0134">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PEKRCKF"/>
    <dbReference type="OrthoDB" id="1663137at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016629">
        <property type="term" value="F:12-oxophytodienoate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02933">
        <property type="entry name" value="OYE_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.20.20.70:FF:000073">
        <property type="entry name" value="12-oxophytodienoate reductase 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="entry name" value="Aldolase class I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045247">
        <property type="entry name" value="Oye-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893">
        <property type="entry name" value="NADH OXIDOREDUCTASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893:SF91">
        <property type="entry name" value="NADPH DEHYDROGENASE 2-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51395">
        <property type="entry name" value="FMN-linked oxidoreductases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0288">FMN</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADH:flavin oxidoreductase/NADH oxidase N-terminal" evidence="8">
        <location>
            <begin position="12"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="119"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="119"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW33755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="367" mass="40812" checksum="CAB635B01B105D12" modified="2014-02-19" version="1">MAAEPDAPAIPLLTPYKMGKFTLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTSPGGLLISEATGVSDTAQGLIHTPGIWTKEQVEAWKPIVNAVHAKGGIFFCQIWHVGRISTTDFQPNGQAPISSTDKPLKQQMGSKSDGETQLPRRLRTDEIPHIVNDFRLAARNAIEAGFDGVEIHGAHGYLLEQFMKDTVNDRSDEYGGSLENRCRFALEVVESVVKEIGAERVGVRLSPFTEHGECEDSDPRALGVYMASALSKYNILYCHMVEPRMKTALEVVESSHSLVPMRKAFSGTFIAAGGYSREDGINAVAENRTDLVAYGRLFLANPDLPKRFELDAPLNKYNRNKFYSHDPVIGYTDYPFLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXV6</accession>
    <name>V7CXV6_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G126600g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXV6"/>
    <dbReference type="Gramene" id="ESW34125">
        <property type="protein sequence ID" value="ESW34125"/>
        <property type="gene ID" value="PHAVU_001G126600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502SX9Z">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MHHREET"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38928">
        <property type="entry name" value="ARGOS7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38928:SF8">
        <property type="entry name" value="TRANSMEMBRANE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW34125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="88" mass="9556" checksum="B79809A2DD768FCC" modified="2014-02-19" version="1">MMIVHPPDQRKDLVSATSSKTTNCACMVSYSVLILALLTLSILLLPLVLPPLPPPPLLLLFLPVFILVVLFFLAFSPSTLPNMPVLTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7CXZ2</accession>
    <name>V7CXZ2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">guanylate kinase</fullName>
            <ecNumber evidence="2">2.7.4.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G135600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GMP + ATP = GDP + ADP</text>
            <dbReference type="Rhea" id="RHEA:20780"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the guanylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CXZ2"/>
    <dbReference type="SMR" id="V7CXZ2"/>
    <dbReference type="STRING" id="3885.V7CXZ2"/>
    <dbReference type="Gramene" id="ESW34233">
        <property type="protein sequence ID" value="ESW34233"/>
        <property type="gene ID" value="PHAVU_001G135600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0707">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="PVSCKGL"/>
    <dbReference type="OrthoDB" id="6334211at2759"/>
    <dbReference type="PhylomeDB" id="V7CXZ2"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004385">
        <property type="term" value="F:GMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00071">
        <property type="entry name" value="GMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.300:FF:000776">
        <property type="entry name" value="Guanylate kinase 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.80">
        <property type="entry name" value="Kelch-type beta propeller"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011043">
        <property type="entry name" value="Gal_Oxase/kelch_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015915">
        <property type="entry name" value="Kelch-typ_b-propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117:SF13">
        <property type="entry name" value="GUANYLATE KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23117">
        <property type="entry name" value="GUANYLATE KINASE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50965">
        <property type="entry name" value="Galactose oxidase, central domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="8">
        <location>
            <begin position="133"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00048594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW34233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="398" mass="43417" checksum="812EA18E0C764B8B" modified="2014-02-19" version="1">MGKAPALLVDDLQDGAQNGLELKNGTCKATATVGDKTYVIGGADDGTLSIEVQIFDRNLGEWVRPTVRGTKPVSCKGLSAVPLEDKILILKKGSKPDDQIWFLEVDTQYVRQQQESLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRDMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVDAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAAAEIDQGKSSHIFDFILYNDKLVESYDRLKKLLGLDDFVTTPKSGPGEIDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEIEGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7CY01</accession>
    <name>V7CY01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Protein kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_001G137000g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CY01"/>
    <dbReference type="SMR" id="V7CY01"/>
    <dbReference type="Gramene" id="ESW34248">
        <property type="protein sequence ID" value="ESW34248"/>
        <property type="gene ID" value="PHAVU_001G137000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0589">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KAHTHQG"/>
    <dbReference type="OrthoDB" id="248923at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055028">
        <property type="term" value="C:cortical microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007017">
        <property type="term" value="P:microtubule-based process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd08215">
        <property type="entry name" value="STKc_Nek"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.200.20:FF:000668">
        <property type="entry name" value="Serine/threonine-protein kinase Nek6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.510.10:FF:000597">
        <property type="entry name" value="serine/threonine-protein kinase Nek6 isoform X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.200.20">
        <property type="entry name" value="Phosphorylase Kinase, domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.510.10">
        <property type="entry name" value="Transferase(Phosphotransferase) domain 1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR050660">
        <property type="entry name" value="NEK_Ser/Thr_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017441">
        <property type="entry name" value="Protein_kinase_ATP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43671">
        <property type="entry name" value="SERINE/THREONINE-PROTEIN KINASE NEK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43671:SF63">
        <property type="entry name" value="SERINE_THREONINE-PROTEIN KINASE NEK6 ISOFORM X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="Protein kinase-like (PK-like)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00107">
        <property type="entry name" value="PROTEIN_KINASE_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="8">
        <location>
            <begin position="16"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="294"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="448"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="305"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="463"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="476"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW34248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="639" mass="71045" checksum="DD4377295B6CC2C1" modified="2014-02-19" version="1">METENGDTKSKKMEEYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDLADNIKKARGSYFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNAEDLTSSVVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAGHQPAFRAPDMAGLINKINRSCISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCHNASSNILPVYPLVNSKDKSRRSNKSSGGKDHKDKEASLVNRLERIHPIEGNGDILVSNLPNDAVTISTSAEDNIETRMVDLTSYIVESSTSISGSKDGSTTSESTICSVCKEDFKSRPARETANNEISLKGTQESPHEEQIFAAKHFHNLEDDINAVSAEVEDGSCYEGLDNAEARREDSNLDISGKSTMSSAGSSSPDKDKSVNEEKPSLTVTPIRVGHDTESGNHLNVFTEGSHMNCLTSDCNDALPVKDDDRANRHILCTHKDDNTVEVDEKSGVSLSVITEVDGDETITTLLDSPCQQRADALESLLELCAQLLKQDKLEELSGVLRPFGKEAVSSRETAIWLAKSLMSAQKFNPET</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="27" xmlns="https://uniprot.org/uniprot">
    <accession>V7CYE9</accession>
    <name>V7CYE9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase-related protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_001G110700g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW33936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CYE9"/>
    <dbReference type="STRING" id="3885.V7CYE9"/>
    <dbReference type="Gramene" id="ESW33936">
        <property type="protein sequence ID" value="ESW33936"/>
        <property type="gene ID" value="PHAVU_001G110700g"/>
    </dbReference>
    <dbReference type="OMA" id="DGFWGFV"/>
    <dbReference type="OrthoDB" id="1930127at2759"/>
    <dbReference type="PhylomeDB" id="V7CYE9"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34132">
        <property type="entry name" value="EMB|CAB87627.1-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34132:SF3">
        <property type="entry name" value="METHYLTRANSFERASE-LIKE PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755929" description="Methyltransferase-related protein" evidence="1">
        <location>
            <begin position="17"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW33936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="86" mass="9986" checksum="2BB329A2A4D15873" modified="2014-02-19" version="1">MCPLRFILVFFSAALAAYFAWTTVRSSPEIDLTIQDQNNEASTDKDNFNFIKMIQNGFWVFVDMASGRYMWRTLMSRNDTVQVKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="67" xmlns="https://uniprot.org/uniprot">
    <accession>V7CZN5</accession>
    <name>V7CZN5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Probable DNA helicase MCM8</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Minichromosome maintenance 8</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">PHAVU_001G174700g</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">cv. G19833</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>ATP + H2O = ADP + phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 16">Belongs to the MCM family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW34715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7CZN5"/>
    <dbReference type="SMR" id="V7CZN5"/>
    <dbReference type="STRING" id="3885.V7CZN5"/>
    <dbReference type="Gramene" id="ESW34715">
        <property type="protein sequence ID" value="ESW34715"/>
        <property type="gene ID" value="PHAVU_001G174700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0480">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="THTVDWQ"/>
    <dbReference type="OrthoDB" id="422555at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042555">
        <property type="term" value="C:MCM complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017116">
        <property type="term" value="F:single-stranded DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000724">
        <property type="term" value="P:double-strand break repair via homologous recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051321">
        <property type="term" value="P:meiotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17759">
        <property type="entry name" value="MCM8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd22247">
        <property type="entry name" value="MCM8_WHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.28.10:FF:000007">
        <property type="entry name" value="DNA helicase MCM8 isoform X1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031327">
        <property type="entry name" value="MCM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR056875">
        <property type="entry name" value="MCM8/REC_WHD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001208">
        <property type="entry name" value="MCM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041562">
        <property type="entry name" value="MCM_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033762">
        <property type="entry name" value="MCM_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630:SF47">
        <property type="entry name" value="DNA HELICASE MCM8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11630">
        <property type="entry name" value="DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00493">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17855">
        <property type="entry name" value="MCM_lid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17207">
        <property type="entry name" value="MCM_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF25051">
        <property type="entry name" value="WHD_MCM8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01657">
        <property type="entry name" value="MCMFAMILY"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00350">
        <property type="entry name" value="MCM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="Nucleic acid-binding proteins"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50051">
        <property type="entry name" value="MCM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9 16" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-0347">Helicase</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0469">Meiosis</keyword>
    <keyword evidence="4 16" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0539">Nucleus</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCM C-terminal AAA(+) ATPase" evidence="17">
        <location>
            <begin position="348"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00042306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00047995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00069556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="ESW34715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="805" mass="89232" checksum="6D2B43CAD98E6AD6" modified="2014-02-19" version="1">MHGTPEEETVQRFGYVSMDPFGLMDILDLYFPQQLFTAEETWLNLTSSLLSFFSSPAGKNLVSQVKNGYGNNTLSLDFQQFQQIYHVEEFYKMLEEKPKIALLCMDAAVHKVLLSEWENDDLVLGAKVDIRLHNCPKTMIALKNLKAAYIDKLVSVRGTVVKVSTVRPLVVQMCFECCKCRQAISRMFPDGKYSPPSTCNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINSYMDIGGGKSKNRNQGFYYLYLEAVSIKNSKSQSMSEDLQDSNPKTRPAELFDLFSFSSKDLEFVVKFAQEHGSDLFRQILQSICPSIYGHELVKAGITLSLFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPAGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKQLSDHIMALHGGNGQLSPALKKRRGDSSDSRATVSQNPGYVADLGVRSGSLISRLRLDPLRDSDFIPLPGQLLRKYIAYARSFVFPRMTKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRVEITAQDATDVVEIMKESLYDKCVDEHGIVDFGRSSGMSQQKEAKRFLNALNKQSESEQKDCFSVSEIYSLADRISLKVPDIDTFIENLNSVGYLLKKGPKTYQVLSSSYARSQPFKTRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="34" xmlns="https://uniprot.org/uniprot">
    <accession>V7D037</accession>
    <name>V7D037_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">PHAVU_001G199700g</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Chromosome</location>
            <location evidence="2">Centromere</location>
            <location evidence="2">Kinetochore</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Cytoskeleton</location>
            <location evidence="1">Spindle</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SKA3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D037"/>
    <dbReference type="SMR" id="V7D037"/>
    <dbReference type="STRING" id="3885.V7D037"/>
    <dbReference type="Gramene" id="ESW35018">
        <property type="protein sequence ID" value="ESW35018"/>
        <property type="gene ID" value="PHAVU_001G199700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWCY">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="VRMNHLV"/>
    <dbReference type="OrthoDB" id="552789at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000940">
        <property type="term" value="C:outer kinetochore"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005876">
        <property type="term" value="C:spindle microtubule"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000278">
        <property type="term" value="P:mitotic cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.250.1400">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033341">
        <property type="entry name" value="SKA3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48118">
        <property type="entry name" value="SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48118:SF1">
        <property type="entry name" value="SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6" id="KW-0132">Cell division</keyword>
    <keyword evidence="12" id="KW-0137">Centromere</keyword>
    <keyword evidence="4" id="KW-0158">Chromosome</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0206">Cytoskeleton</keyword>
    <keyword evidence="9" id="KW-0995">Kinetochore</keyword>
    <keyword evidence="7" id="KW-0493">Microtubule</keyword>
    <keyword evidence="8" id="KW-0498">Mitosis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="120"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="13">
        <location>
            <begin position="120"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="13">
        <location>
            <begin position="131"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="ESW35018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="299" mass="33701" checksum="8D3915584E8E2125" modified="2014-02-19" version="1">METQLGERKKTMAEDPIFSFCNGLAAFCNHLHSSSDALKQSIDRRPIPLDSASSIFMQCLNRRVSTATADLDMLDSMSFGTVSFEELLGHCSELYKKNHSDLLQLQERLQSFGYTPVPDIEEEEEEDEAEDTQHQDPEDKLDSPSSFYGSLSVADHSFKSFEEDALYPLCLIYFLPLNLKLDESLSLKKFGLSDAYLATLASEGDLASHEPEKLQILKSEFECLPAYMKGLASWEDLLGAVDKINSSLSKKTNGCSYFHQDEIPSFELGPKTRSYLLLFVRMNRLVVETIDGILSYRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7D159</accession>
    <name>V7D159_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_001G232000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="13" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ITPK1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002288">
        <property type="protein sequence ID" value="ESW35398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7D159"/>
    <dbReference type="SMR" id="V7D159"/>
    <dbReference type="STRING" id="3885.V7D159"/>
    <dbReference type="Gramene" id="ESW35397">
        <property type="protein sequence ID" value="ESW35397"/>
        <property type="gene ID" value="PHAVU_001G232000g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW35398">
        <property type="protein sequence ID" value="ESW35398"/>
        <property type="gene ID" value="PHAVU_001G232000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QQ6B">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KMAIVFR"/>
    <dbReference type="OrthoDB" id="25308at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 1"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052726">
        <property type="term" value="F:inositol-1,3,4-trisphosphate 5-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052725">
        <property type="term" value="F:inositol-1,3,4-trisphosphate 6-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047325">
        <property type="term" value="F:inositol-3,4,5,6-tetrakisphosphate 1-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032957">
        <property type="term" value="P:inositol trisphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1490.220:FF:000003">
        <property type="entry name" value="inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.470.20:FF:000047">
        <property type="entry name" value="Inositol-tetrakisphosphate 1-kinase 4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008656">
        <property type="entry name" value="Inositol_tetrakis-P_1-kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040464">
        <property type="entry name" value="InsP(3)kin_ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041429">
        <property type="entry name" value="ITPK1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14217">
        <property type="entry name" value="INOSITOL-TETRAKISPHOSPHATE 1-KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14217:SF1">
        <property type="entry name" value="INOSITOL-TETRAKISPHOSPHATE 1-KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05770">
        <property type="entry name" value="Ins134_P3_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17927">
        <property type="entry name" value="Ins134_P3_kin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038163">
        <property type="entry name" value="ITPK_uncN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Inositol-tetrakisphosphate 1-kinase N-terminal" evidence="11">
        <location>
            <begin position="159"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp" evidence="10">
        <location>
            <begin position="294"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF05770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW35398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="480" mass="53570" checksum="C8BBD3D17E80D10C" modified="2014-02-19" version="1">MGIVRGVILDESVLLAESDDDQTTSTLRPGAESLTRTLFLSKIHSGIAYDSGLLDDKVSILKGIANLYSLDCFALNDSATEAKPGWSNTDDGSVIYLVSNKKEFLPKLNRYNWLIVVLNVGGESSCHNLNILKIESLEELPLTICRLNKKLIGTNAVTVGYTMKPSRVEDFAKRGAFPLCPTQHGLMFVPLTSNMSLSSQLKDVDIVLHKATDEILSIEDDKLTFKQNMQALQKYLDQHQDICVIDPLSYIYPLLDRLEIQQVLLGLVELNTEGKCLIRGAHFCKVDNFDEFDFATGLSEARLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPLPAVIQEYVDHSSTLYKFYVLGEKNFYAVKKSIPNADILMKSYNGDELKPLLFDSLKSLPTADSITSNESIDLKLVTDAANWLRRRLHLTIFGFDVVIQEGTCDHVIVDVNYLPSFKEVPDDIAILAFWEAIRNKFDCSVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3NZY0</accession>
    <name>A0ACC3NZY0_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L001741</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967828">
        <property type="protein sequence ID" value="KAK6645761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6645761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="265" mass="28166" checksum="4FA00B11C395C1BA" modified="2026-01-28" version="1">MKRMDIFCASQASTAICLSMDQASCSSSSNTILLGGRVIDRHNPIINDSRRSTSKSLTAPCSSSHSPINPKPYHELHKPKKNSSSKTAAKGLENHRKKNTSQNITEHVTNTSKPIDSIVGRSLLKPTSDLITPHGSTRSLLGGSSLLDASLVNTKTSQLGHQEETISASKHSSSSHQNSCSSDQQVVVLRVSLHCKGCEGKVRKHLSRMQGVSSFNIDFAAKKVTVVGDVTPSSVLASISKVKSAQLWPPATASAVGSATVEAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P0Y1</accession>
    <name>A0ACC3P0Y1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L010843</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967757">
        <property type="protein sequence ID" value="KAK6646149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="352" mass="37962" checksum="B51D08667CF78BDF" modified="2026-01-28" version="1">MALSSGVRSCPPSDRAALLAFKAALREPYLGIFNSWTGADCCHNWYGVSCDQETRRVADISLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCIAALPFLRIVDLIGNRISGSIPADIGRLHRLTVLNIADNRISGTIPASLANLTSLMHLDLRNNLLSGPIPRHFGSLRMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGPIPESLGKMAVLSTLNLDLNKLSGPIPVSLFSSGISDLNLSRNALEGNIPDAFGPRSYFTALDLSYNNLKGTIPKSLSSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVFNDCLCGKPLKPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2026-01-28" modified="2026-01-28" version="1" xmlns="https://uniprot.org/uniprot">
    <accession>A0ACC3P1I4</accession>
    <name>A0ACC3P1I4_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_L002132</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="1" key="1">
        <citation type="submission" date="2023-07" db="EMBL/GenBank/DDBJ databases">
            <title>WGS assembly of Phaseolus vulgaris.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="Mcclean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="MU967754">
        <property type="protein sequence ID" value="KAK6646258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="KAK6646258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="510" mass="54461" checksum="CA9D020B4F38BBAB" modified="2026-01-28" version="1">MASLSCSSDLATLINQTAAAHYLCNQFDSISRKLNDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRDYPIPTADYSFFLYQWAFAIAVAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASATRSDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSSSLVVLGSFLLWFGWYGFNPGSFFTIAKGYGGASYKGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIALNKLAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPFGALMNGGGKLLAAQLIEIVVVCGWVTATMGPLFYGLHKMNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGLMMRKIEPASTSPSPPAAPHLSLHPLSISSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="33" xmlns="https://uniprot.org/uniprot">
    <accession>V7AE18</accession>
    <name>V7AE18_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G038000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AE18"/>
    <dbReference type="STRING" id="3885.V7AE18"/>
    <dbReference type="Gramene" id="ESW03734">
        <property type="protein sequence ID" value="ESW03734"/>
        <property type="gene ID" value="PHAVU_011G038000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RXRR">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSHVGMA"/>
    <dbReference type="OrthoDB" id="1624361at2759"/>
    <dbReference type="PhylomeDB" id="V7AE18"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374">
        <property type="entry name" value="AUXIN-INDUCED PROTEIN-LIKE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31374:SF183">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW03734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="137" mass="15688" checksum="707E5D8A50A6A814" modified="2014-02-19" version="1">MSPSTTGNCSKIRRIVRVRQMLLRWRRKARLATSDVPAGHVAVCVGPSRRRFIVRATYLNHPIFKMLLAKAEEEYGFCNHGPLALPCDESLFEELLRVVDRPVPGLYTLEDLRRRCHVDVSSGNSESWPLLRDELIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="55" xmlns="https://uniprot.org/uniprot">
    <accession>V7AF67</accession>
    <name>V7AF67_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">C3H1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_011G018600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="SMR" id="V7AF67"/>
    <dbReference type="STRING" id="3885.V7AF67"/>
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        <property type="protein sequence ID" value="ESW03498"/>
        <property type="gene ID" value="PHAVU_011G018600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVMW">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IWILTCY"/>
    <dbReference type="OrthoDB" id="250836at2759"/>
    <dbReference type="PhylomeDB" id="V7AF67"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR051767">
        <property type="entry name" value="Nucleoporin_NUP42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000571">
        <property type="entry name" value="Znf_CCCH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036855">
        <property type="entry name" value="Znf_CCCH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46527:SF1">
        <property type="entry name" value="NUCLEOPORIN NUP42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46527">
        <property type="entry name" value="NUCLEOPORIN-LIKE PROTEIN 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00642">
        <property type="entry name" value="zf-CCCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00356">
        <property type="entry name" value="ZnF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90229">
        <property type="entry name" value="CCCH zinc finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50103">
        <property type="entry name" value="ZF_C3H1"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="C3H1-type" evidence="8">
        <location>
            <begin position="4"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C3H1-type" evidence="6">
        <location>
            <begin position="4"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="24"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="208"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="57"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="99"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="210"/>
            <end position="240"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW03498.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="363" mass="40096" checksum="ED2B09CC41E6A1EA" modified="2014-02-19" version="1">MRDICRNFQRGSCQYGERCRYSHVTQQRKPNDQGFGGQNGSHQQRSTNPFGFGSGSGSQQQQQKSKPFGFGAQNSSQLNGGPRPEYKPNQYKPFENKWNRQPSKPQNGVKSDNNPQPVEHRCTDPDNCKRQIAEDFEKEKPIWILTCYSHCKGAPCDIVGDISYEELRASAYEDAKRGMSLQSIVEKERNILKSKMLEFEKLLSEPYQKPVSSSLDSQRPQSIGANANQFSGTSQSNGPLSVSSFSQLGSSMNMGFGRPSAPPTNTLAQPSFFGVGVTSGNFGVQSNPHSTQVDLTMFPGSTQPTSTTFNNSGPNTMFQTTSDVQLSNKLQAENVSGDISIWLKDKWNPGEIPEEAPPDSLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="25" xmlns="https://uniprot.org/uniprot">
    <accession>V7AFI5</accession>
    <name>V7AFI5_PHAVU</name>
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        <recommendedName>
            <fullName evidence="4">Thionin-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G083200g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
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            <taxon>Viridiplantae</taxon>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
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            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
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            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
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            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="PHAVU_011G083200g"/>
    </dbReference>
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        <property type="component" value="Chromosome 11"/>
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        <property type="entry name" value="Vanabin-2_sf"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-0732">Signal</keyword>
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        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5004755473" description="Thionin-like protein" evidence="1">
        <location>
            <begin position="30"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="4">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="104" mass="11146" checksum="E574FCBF068E4EB9" modified="2014-02-19" version="1">MGKNTMKTNRVAVLMMILLGFVQILQIEALTLPCPVLCAVECLPSQEPYPLCLATCISKCQMSTGASNCARSCGVNKSITIHIDAVGNITNVVDSCLDKCLKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="56" xmlns="https://uniprot.org/uniprot">
    <accession>V7AGS4</accession>
    <name>V7AGS4_PHAVU</name>
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        <recommendedName>
            <fullName evidence="8">O-methyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G1223001g</name>
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        <name type="scientific">Phaseolus vulgaris</name>
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        <name type="synonym">French bean</name>
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        <lineage>
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            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="protein sequence ID" value="ESW04749"/>
        <property type="gene ID" value="PHAVU_011G1223001g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3178">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="QHNATEN"/>
    <dbReference type="OrthoDB" id="2410195at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
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        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009717">
        <property type="term" value="P:isoflavonoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-ARBA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.10:FF:000213">
        <property type="entry name" value="Coniferyl alcohol 9-O-methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="entry name" value="Vaccinia Virus protein VP39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="entry name" value="Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016461">
        <property type="entry name" value="COMT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001077">
        <property type="entry name" value="COMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012967">
        <property type="entry name" value="COMT_dimerisation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11746">
        <property type="entry name" value="O-METHYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08100">
        <property type="entry name" value="Dimerisation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00891">
        <property type="entry name" value="Methyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="S-adenosyl-L-methionine-dependent methyltransferases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="Winged helix' DNA-binding domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51683">
        <property type="entry name" value="SAM_OMT_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="O-methyltransferase dimerisation" evidence="5">
        <location>
            <begin position="22"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="O-methyltransferase C-terminal" evidence="4">
        <location>
            <begin position="88"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW04749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="8">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="213" mass="23852" checksum="E556BE72FEA1775E" modified="2014-02-19" version="1" fragment="single">MSVHHEDQSSKLFQSQTHILNQTFGFINSMCLKCAIDLCIPDVIHKYGKPMPLSQLIASLPVHPSKTCFISRLMQILVHSVLFNPWFQFSTWFTNDDPTPFHTQNEMTLWDYASREPKFNHLFNDAMTNDTRLISSVVIEKCKGVLQGLESLVDVGGGTGTLAKAIANSFPHLNCIVFDLPHVVHGLQGTDNIKYVGGDMFETIPSADSIMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="46" xmlns="https://uniprot.org/uniprot">
    <accession>V7AI72</accession>
    <name>V7AI72_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nascent polypeptide-associated complex subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G041900g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Part of the nascent polypeptide-associated complex (NAC).</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the NAC-beta family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW03786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AI72"/>
    <dbReference type="SMR" id="V7AI72"/>
    <dbReference type="STRING" id="3885.V7AI72"/>
    <dbReference type="Gramene" id="ESW03786">
        <property type="protein sequence ID" value="ESW03786"/>
        <property type="gene ID" value="PHAVU_011G041900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG2240">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="AGDTYME"/>
    <dbReference type="OrthoDB" id="8033832at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="CDD" id="cd22055">
        <property type="entry name" value="NAC_BTF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.20.70.30:FF:000001">
        <property type="entry name" value="Transcription factor BTF3 homolog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.70.30">
        <property type="entry name" value="Nascent polypeptide-associated complex domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039370">
        <property type="entry name" value="BTF3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038187">
        <property type="entry name" value="NAC_A/B_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002715">
        <property type="entry name" value="Nas_poly-pep-assoc_cplx_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10351">
        <property type="entry name" value="TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01849">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01407">
        <property type="entry name" value="NAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51151">
        <property type="entry name" value="NAC_AB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NAC-A/B" evidence="4">
        <location>
            <begin position="33"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="119"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="20"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="3">
        <location>
            <begin position="122"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW03786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="160" mass="17448" checksum="9355D249D4A84A59" modified="2014-02-19" version="1">MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGAAGSAAAQEENDDDVPELVQGQDFETAAEETKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="44" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIV2</accession>
    <name>V7AIV2_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pentacotripeptide-repeat region of PRORP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">PHAVU_011G062000g</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the PPR family. PCMP-E subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIV2"/>
    <dbReference type="SMR" id="V7AIV2"/>
    <dbReference type="STRING" id="3885.V7AIV2"/>
    <dbReference type="Gramene" id="ESW04036">
        <property type="protein sequence ID" value="ESW04036"/>
        <property type="gene ID" value="PHAVU_011G062000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YPNSATI"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000212">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein At2g03380, mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:001383">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein mitochondrial"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF487">
        <property type="entry name" value="REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN, PUTATIVE-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="197"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="232"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="267"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="337"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="368"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00061659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="ESW04036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="6">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="550" mass="60489" checksum="AE44B309CE4B4155" modified="2014-02-19" version="1">MHGLLRSPTLLRITTTNGIINSRFFGSEHQRFAELIDVYARDRALHLGKKLHASLITKGFSRFNVIASNLVAFYVSCGQLSHARKLFDKIPTTNVRRWIALIGTCARCGFCNLALAVFAEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKMHGLILKCSFELDSFVSSALIVMYSKCAKVEDARKVFDGMVVKDTVSLNAVVTGYVQQGAANEALSLVESMKLMGLKSNVVTWNSLISGFSQKGDQGMVSEIFRSMIADGLEPDVVSWTSVISGLVQNFRNNEAFDAFKQMLSHGFCPTSATISTLLPACATAARVKIGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEAKNLFSRMAEKNTVTWNSIIFGFANHGYCKEAIELFNQMEKEGVAKLGHLTFTAALTACSHVGDIELGQSLFKTMHEKHGIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPIEPDLFVWGALLAGCRNHGHVELAEVAALHLKELEPESAANRLLLSSLYADAGKWGKAEKIKKRMKKGKLRKLQGLSWINNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="26" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIW1</accession>
    <name>V7AIW1_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G1256002g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIW1"/>
    <dbReference type="Gramene" id="ESW04793">
        <property type="protein sequence ID" value="ESW04793"/>
        <property type="gene ID" value="PHAVU_011G1256002g"/>
    </dbReference>
    <dbReference type="OrthoDB" id="1436517at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="82" mass="9566" checksum="1B2283CA84A5ED10" modified="2014-02-19" version="1" fragment="single">AQEIQKKNVHPHRLSRGGYDKLEQKMIKEISSSHSTEDSNCSIITRPPRHEKWKRARQRPSGDYTSEEVQSVTKRIVSNLYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="60" xmlns="https://uniprot.org/uniprot">
    <accession>V7AIX0</accession>
    <name>V7AIX0_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Pectinesterase</fullName>
            <ecNumber evidence="9">3.1.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_011G1890000g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Acts in the modification of cell walls via demethylesterification of cell wall pectin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 9">
            <text>[(1-&gt;4)-alpha-D-galacturonosyl methyl ester](n) + n H2O = [(1-&gt;4)-alpha-D-galacturonosyl](n) + n methanol + n H(+)</text>
            <dbReference type="Rhea" id="RHEA:22380"/>
            <dbReference type="Rhea" id="RHEA-COMP:14570"/>
            <dbReference type="Rhea" id="RHEA-COMP:14573"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:140522"/>
            <dbReference type="ChEBI" id="CHEBI:140523"/>
            <dbReference type="EC" id="3.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Secreted</location>
            <location evidence="1 9">Cell wall</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the pectinesterase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the PMEI family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.11" evidence="9"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AIX0"/>
    <dbReference type="STRING" id="3885.V7AIX0"/>
    <dbReference type="Gramene" id="ESW05552">
        <property type="protein sequence ID" value="ESW05552"/>
        <property type="gene ID" value="PHAVU_011G1890000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QVDS">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="YSEFQNF"/>
    <dbReference type="OrthoDB" id="2019149at2759"/>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004857">
        <property type="term" value="F:enzyme inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030599">
        <property type="term" value="F:pectinesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042545">
        <property type="term" value="P:cell wall modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15798">
        <property type="entry name" value="PMEI-like_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.20.140.40:FF:000001">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="2.160.20.10:FF:000092">
        <property type="entry name" value="Putative pectinesterase 57"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.40">
        <property type="entry name" value="Invertase/pectin methylesterase inhibitor family protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="entry name" value="Single-stranded right-handed beta-helix, Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035513">
        <property type="entry name" value="Invertase/methylesterase_inhib"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033131">
        <property type="entry name" value="Pectinesterase_Asp_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000070">
        <property type="entry name" value="Pectinesterase_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006501">
        <property type="entry name" value="Pectinesterase_inhib_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018040">
        <property type="entry name" value="Pectinesterase_Tyr_AS"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01614">
        <property type="entry name" value="PME_inhib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31707">
        <property type="entry name" value="PECTINESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01095">
        <property type="entry name" value="Pectinesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04043">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00856">
        <property type="entry name" value="PMEI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="Pectin lyase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101148">
        <property type="entry name" value="Plant invertase/pectin methylesterase inhibitor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00800">
        <property type="entry name" value="PECTINESTERASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00503">
        <property type="entry name" value="PECTINESTERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0063">Aspartyl esterase</keyword>
    <keyword evidence="5 9" id="KW-0134">Cell wall</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0964">Secreted</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="Pectinesterase inhibitor" evidence="11">
        <location>
            <begin position="64"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="414"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW05552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="436" mass="47823" checksum="E002FE0347553D34" modified="2014-02-19" version="1" fragment="single">MSSFKSYGKVDESEHAMLEVRSKSRKRITIIALSTIVLIGVVCAAVFGTVAHNNKNSNSNDAPSVSSSVKAVCDVTLYKNSCYSSLGSVAHSGQLQPQDLFLLSIKVALGEASKALEYFSEKGGFSGLNVDEKTMEDFKNCKDLLGLAVDHLNSSLASGGKFSLVDVLEDLRTWLSAAGTYQQTCIDGIGEAEESLKSSVYNNLKNSTEFTSNSLAIVTWLDKAASSLKLRRLLSTSPHQDEEPKWLHSKDRKMLEADNLKKKADIVVAKDGSGKYKTITAALKHVPEKSDKRTVIYVKKGIYNENVRVEKTKWNVMIIGDGMNTTIVSGSLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTSADQAVFYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPKVPMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="35" xmlns="https://uniprot.org/uniprot">
    <accession>V7AJ26</accession>
    <name>V7AJ26_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G131500g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ARG7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AJ26"/>
    <dbReference type="STRING" id="3885.V7AJ26"/>
    <dbReference type="Gramene" id="ESW04863">
        <property type="protein sequence ID" value="ESW04863"/>
        <property type="gene ID" value="PHAVU_011G131500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502S4NX">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KHHSGFF"/>
    <dbReference type="OrthoDB" id="625231at2759"/>
    <dbReference type="PhylomeDB" id="V7AJ26"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009733">
        <property type="term" value="P:response to auxin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003676">
        <property type="entry name" value="SAUR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31929">
        <property type="entry name" value="SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02519">
        <property type="entry name" value="Auxin_inducible"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW04863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="92" mass="10236" checksum="3A46775D56399075" modified="2014-02-19" version="1">MGFRLPVIRKALFAANQASSKAVDAQKGHLSVYVGEKMKRFVIPVSYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCTEDVFQRITSCLNSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="31" xmlns="https://uniprot.org/uniprot">
    <accession>V7AK89</accession>
    <name>V7AK89_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">PHAVU_011G165000g</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AK89"/>
    <dbReference type="Gramene" id="ESW05258">
        <property type="protein sequence ID" value="ESW05258"/>
        <property type="gene ID" value="PHAVU_011G165000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0201">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KRKVRFW"/>
    <dbReference type="OrthoDB" id="1917218at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019210">
        <property type="term" value="F:kinase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039620">
        <property type="entry name" value="BKI1/MAKR1/3/4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33312">
        <property type="entry name" value="MEMBRANE-ASSOCIATED KINASE REGULATOR 4-RELATED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33312:SF35">
        <property type="entry name" value="TPRXL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="139"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="8"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="1">
        <location>
            <begin position="67"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="ESW05258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="212" mass="23927" checksum="34F1C006B8DA4F65" modified="2014-02-19" version="1">MDNKKNISTSPSSGDSFSFRSTPTPDSDFEFGSLTPDSPSAEPFATSPADHLFLNGRLQPHFFPLPTSRTSSTRDSLLSSLSNSTNSSCSSARTSSSDSSERKSFHNKLKGGAFLSKTPSHYQGYGCSQRWQYITPMPALNREGSLRRRTNTNQEKDNKGTMRRRKKKKNKKSKKENKGVRLRFGRRILRWFVMACRECHAMEPSKGCNREK</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="41" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKJ9</accession>
    <name>V7AKJ9_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfotransferase</fullName>
            <ecNumber evidence="3">2.8.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_011G207500g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the sulfotransferase 1 family.</text>
    </comment>
    <dbReference type="EC" id="2.8.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKJ9"/>
    <dbReference type="SMR" id="V7AKJ9"/>
    <dbReference type="Gramene" id="ESW05765">
        <property type="protein sequence ID" value="ESW05765"/>
        <property type="gene ID" value="PHAVU_011G207500g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG1584">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KYIVHTI"/>
    <dbReference type="OrthoDB" id="205623at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="entry name" value="P-loop containing nucleotide triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11783">
        <property type="entry name" value="SULFOTRANSFERASE SULT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="P-loop containing nucleoside triphosphate hydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulfotransferase" evidence="4">
        <location>
            <begin position="59"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="ESW05765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="327" mass="37511" checksum="FD34D5F6BA8E400A" modified="2014-02-19" version="1">MASTDMQKENDGEKLTLSLQKEKSWAQPYPLYLFQDFWCPGIHIQAVDLFQQHFRAKQSDVVVASFPKSGTIWIKALAFAISNHQRFSLENHPLLTSNPHELVPFLEFTFGGGDIQAQILHLDNLAEPRIFGTHTPFPSLPTSTKESNCKIIYICRDPFDNFVSAWTYFNKVKPLSLTAVTQDEAFEMYCNGVIDYGPWWSHMLGYWNESVARPDKVMFLKYEDLKENTSFHVKKIGEFLGCPFTEEEEKNGVIEGIIKLCSFEKMKDLEVNKSGVIGRGSIEKKNFFRKGEKGDWVNYFTPPMVEKLSKIVEEKLSGSGLSFKKKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="45" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKQ3</accession>
    <name>V7AKQ3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DYW domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">PHAVU_011G213900g</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PPR family. PCMP-H subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKQ3"/>
    <dbReference type="SMR" id="V7AKQ3"/>
    <dbReference type="Gramene" id="ESW05840">
        <property type="protein sequence ID" value="ESW05840"/>
        <property type="gene ID" value="PHAVU_011G213900g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG4197">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="WNSGHYV"/>
    <dbReference type="OrthoDB" id="185373at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009451">
        <property type="term" value="P:RNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000344">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000184">
        <property type="entry name" value="Pentatricopeptide repeat-containing protein, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.25.40.10:FF:000450">
        <property type="entry name" value="Putative pentatricopeptide repeat-containing protein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="entry name" value="Tetratricopeptide repeat domain"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032867">
        <property type="entry name" value="DYW_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046849">
        <property type="entry name" value="E2_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046848">
        <property type="entry name" value="E_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046960">
        <property type="entry name" value="PPR_At4g14850-like_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002885">
        <property type="entry name" value="PPR_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00756">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926:SF446">
        <property type="entry name" value="PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47926">
        <property type="entry name" value="PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14432">
        <property type="entry name" value="DYW_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20431">
        <property type="entry name" value="E_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20430">
        <property type="entry name" value="Eplus_motif"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01535">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13041">
        <property type="entry name" value="PPR_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="TPR-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51375">
        <property type="entry name" value="PPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="385"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="79"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="181"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="251"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="282"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="352"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="repeat" description="PPR" evidence="3">
        <location>
            <begin position="383"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="domain" description="DYW" evidence="5">
        <location>
            <begin position="598"/>
            <end position="690"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="ESW05840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="690" mass="77412" checksum="A37015728ABFB6FF" modified="2014-02-19" version="1">MHAEQKMNINMNMNMGLELKKCLASGFRWLQEVKQCHCRLLRLGLHHDTFLINTLLRSSLNLRATQYATVVFAQTPNPNIFLYNTLIRGLVSNEAFHEAVSLYASMRQRSAFAPDNFTFPFVLKACARLRNTHVGLTIHSLVIRTGFEKDVFVNTGLVCFYSKNGFLSHARRVFDEIPEKNVVSWTAIICGYVEFGYCEEAVGLFRGLLEMGVKPDSFTLVRVLYACSRTGDLASGRWIDGYMRETGLCGNVFVATSLVDMYTKCGSMEEARRVFDGMVERDVVCWSALIQGYAANGMPKKALEVFFEMQRENVRPDCYAMVGFLSGCARLGALELGNWARGLVDGDEFLCNPVLGTALIDFYAKCGNVARAVEVFNSMRRKDCVVFNAVISGLAMCGHVGAAFGVFSQMGKVGMQPDGNTFVGLLCGCTHAGLVDDGRRYFNRMSCVFDVTPTIEHYGCMVDLLARAGLLVEARDLIKSMPMKANAIVWGALLGGCRLHKDTQLAEHVLMQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSSLSQKGMQKLPGCSWVEVDGVVHEFRVGDTSHPLTHKIYEKLESLFKDLREAGYSPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTSAKDVIRVVKNLRVCGDCHEAIKLISKVTHREIIIRDNNRFHHLSEGSCSCRDYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="39" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKQ6</accession>
    <name>V7AKQ6_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ER lumen protein retaining receptor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">PHAVU_010G022200g</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Endoplasmic reticulum membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ERD2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKQ6"/>
    <dbReference type="SMR" id="V7AKQ6"/>
    <dbReference type="STRING" id="3885.V7AKQ6"/>
    <dbReference type="Gramene" id="ESW06129">
        <property type="protein sequence ID" value="ESW06129"/>
        <property type="gene ID" value="PHAVU_010G022200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG3106">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="HEHNHFF"/>
    <dbReference type="OrthoDB" id="7694678at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005789">
        <property type="term" value="C:endoplasmic reticulum membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046923">
        <property type="term" value="F:ER retention sequence binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006621">
        <property type="term" value="P:protein retention in ER lumen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016192">
        <property type="term" value="P:vesicle-mediated transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000133">
        <property type="entry name" value="ER_ret_rcpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10585">
        <property type="entry name" value="ER LUMEN PROTEIN RETAINING RECEPTOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00810">
        <property type="entry name" value="ER_lumen_recept"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00660">
        <property type="entry name" value="ERLUMENR"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0931">ER-Golgi transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-0675">Receptor</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="236"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="ESW06129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="14">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="272" mass="30966" checksum="A940389A707525D4" modified="2014-02-19" version="1">MGTKRGSSRVSVLFERLRKMPMKVKIFCGALLAVCALVALKFTFRSHYYYFIASEAIHVAGIIALVYKLFALKTCSGLSLKTQELTALFVAARLCCSTLTEANIHTVLDLISLSSTLVVIWMIRFKLKSSYIKELDNTKLYFVVVPAAIAAILVHPYTNHWRLVRIVWAFSLYLEAVSVVPQLRFMQNAKMVETFTGYYVFALGVSRFMALAYWIIQIYESGGTYLFLAGSGYFWFLAAFVAEMVQSFILADFCYYYMKSFVQGQLLRKMPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="51" xmlns="https://uniprot.org/uniprot">
    <accession>V7AKX5</accession>
    <name>V7AKX5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">HTH myb-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">PHAVU_011G124200g</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Nucleus</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW04771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AKX5"/>
    <dbReference type="SMR" id="V7AKX5"/>
    <dbReference type="Gramene" id="ESW04771">
        <property type="protein sequence ID" value="ESW04771"/>
        <property type="gene ID" value="PHAVU_011G124200g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QWCV">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="EMEGFSM"/>
    <dbReference type="OrthoDB" id="60033at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000976">
        <property type="term" value="F:transcription cis-regulatory region binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000007">
        <property type="entry name" value="Two-component response regulator"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044825">
        <property type="entry name" value="GLK1/2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017930">
        <property type="entry name" value="Myb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006447">
        <property type="entry name" value="Myb_dom_plants"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001005">
        <property type="entry name" value="SANT/Myb"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR01557">
        <property type="entry name" value="myb_SHAQKYF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31312">
        <property type="entry name" value="TRANSCRIPTION ACTIVATOR GLK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31312:SF1">
        <property type="entry name" value="TRANSCRIPTION ACTIVATOR GLK1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00249">
        <property type="entry name" value="Myb_DNA-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51294">
        <property type="entry name" value="HTH_MYB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0539">Nucleus</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH myb-type" evidence="7">
        <location>
            <begin position="168"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="74"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="113"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="155"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="ESW04771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="426" mass="46316" checksum="41986C139BBDBBCD" modified="2014-02-19" version="1">MLAVAPLRSIKDEKNQGEMEGFSMATATTPDDFDFVDLSEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSAGEESSEMNSSADNSKEENDKNCVITASKTEEEDKSSCAASPQDSGSNPGEEIVSNKNGESVVVNPAPKEGGKGKKSSSAQLKNNSNSNNPQGKRKLKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRHIYGVGGSGGKRGGSPWLAPTMGFPPPMTTMHHFRPLHVWGHPSTDHSFMHMWPKHLPPSQPLSWPSPAPPQDPSFWHQRAPSALIPGTACFPQPLTPTGFGTHLVPGIPPHAMYKADQTIGIQGPRPLLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPAIDSVMSELQRQGIPNIPPTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7ALP5</accession>
    <name>V7ALP5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EF-hand domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">PHAVU_011G149700g</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ALP5"/>
    <dbReference type="SMR" id="V7ALP5"/>
    <dbReference type="STRING" id="3885.V7ALP5"/>
    <dbReference type="Gramene" id="ESW05071">
        <property type="protein sequence ID" value="ESW05071"/>
        <property type="gene ID" value="PHAVU_011G149700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0028">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="MEFCSLM"/>
    <dbReference type="OrthoDB" id="343296at2759"/>
    <dbReference type="PhylomeDB" id="V7ALP5"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.238.10">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044205">
        <property type="entry name" value="KIC/PBP1/KRP1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN KIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47319:SF2">
        <property type="entry name" value="CALCIUM-BINDING PROTEIN PBP1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13833">
        <property type="entry name" value="EF-hand_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="EF-hand"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0106">Calcium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="42"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="ESW05071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="111" mass="12479" checksum="BBE0A0B2B02F086D" modified="2014-02-19" version="1">MELDHGFDFEDRFPSMIARLGAEGFIGELCHGFHLLMDVNMGLITFESLKVSTYLLGLEVRDDELLCMLMEGDLDGDGALNQMEFCILMFRLSPCLMDMQGNEDPVHASVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="54" xmlns="https://uniprot.org/uniprot">
    <accession>V7AM01</accession>
    <name>V7AM01_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Homeobox-leucine zipper protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">HD-ZIP protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Homeodomain transcription factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_011G156800g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Probable transcription factor.</text>
    </comment>
    <comment type="function">
        <text evidence="11">Transcription factor.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9 10">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 11">Belongs to the HD-ZIP homeobox family. Class I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AM01"/>
    <dbReference type="SMR" id="V7AM01"/>
    <dbReference type="Gramene" id="ESW05156">
        <property type="protein sequence ID" value="ESW05156"/>
        <property type="gene ID" value="PHAVU_011G156800g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0483">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="ELYAYFM"/>
    <dbReference type="OrthoDB" id="6159439at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000981">
        <property type="term" value="F:DNA-binding transcription factor activity, RNA polymerase II-specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of DNA-templated transcription"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="CDD" id="cd00086">
        <property type="entry name" value="homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.10.60:FF:000533">
        <property type="entry name" value="Homeobox-leucine zipper protein ATHB-52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.60">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001356">
        <property type="entry name" value="HD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045224">
        <property type="entry name" value="HDZip_class_I_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017970">
        <property type="entry name" value="Homeobox_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeodomain-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24326">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24326:SF522">
        <property type="entry name" value="HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-52"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00046">
        <property type="entry name" value="Homeodomain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00389">
        <property type="entry name" value="HOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="Homeodomain-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00027">
        <property type="entry name" value="HOMEOBOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50071">
        <property type="entry name" value="HOMEOBOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 9 10" id="KW-0371">Homeobox</keyword>
    <keyword evidence="6 9 10" id="KW-0539">Nucleus</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 11" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Homeobox" evidence="14">
        <location>
            <begin position="16"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="Homeobox" evidence="9">
        <location>
            <begin position="18"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="122"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="82"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="13">
        <location>
            <begin position="129"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00037260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU369038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW05156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="204" mass="23275" checksum="E8E6DA2336497D8E" modified="2014-02-19" version="1">MGDLIFSFKNQEHGHHRARHNKKRLTEEQVSILEKCFGSNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKTQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKKAQEMMLVGDVGKGGEHSNTSNNNSNNYNNNNNNGSCGEFSTSFEEGGSSGMVLDDETRHHECWQSGEVMQVEELYAYFMGANYGSSLNEKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7AMA7</accession>
    <name>V7AMA7_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="17">Cytochrome P450</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">PHAVU_010G011000g</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">cv. G19833</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW05998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AMA7"/>
    <dbReference type="STRING" id="3885.V7AMA7"/>
    <dbReference type="Gramene" id="ESW05998">
        <property type="protein sequence ID" value="ESW05998"/>
        <property type="gene ID" value="PHAVU_010G011000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="KOG0156">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="IFTFYMG"/>
    <dbReference type="OrthoDB" id="2789670at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd11072">
        <property type="entry name" value="CYP71-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.630.10:FF:000011">
        <property type="entry name" value="Cytochrome P450 83B1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955:SF22">
        <property type="entry name" value="CYTOCHROME P450 83B1-LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47955">
        <property type="entry name" value="CYTOCHROME P450 FAMILY 71 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="Cytochrome P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12 13" id="KW-0349">Heme</keyword>
    <keyword evidence="9 12 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 13" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="8 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="12">
        <location>
            <position position="444"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR602401-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="ESW05998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="17">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="502" mass="57893" checksum="35BE987CD3473764" modified="2014-02-19" version="1">MLCPTMLSPLLILCLAIPVFFSFFLCRKTLNNPPFPPGPKGLPIIGNLHQLNTSALPLQLWKFSKKYGPIFSLKLGLRPAIVVSSPKLAEEVMKDYDLQFCGRPRLFGQQKLSYNGIDIVFSPYNSYWREMRKICVFHILSSIRVSNFSSIRHLEVKQMMGKISMYASSSKVTNLSDALMSLTSTIICRIAFGRRYEDEGTERSMFHRLLNECQAMLAMLFFSDYIPFLGWIDKLRGLRGRLEQNFKELDTFYQQVIDEHMDPNRKKPENEDLIDVLLQLKNQRSFSVDLENDHIKAVFMNMLVAATDTTSATTIWAMTALLKNPRVMKKVQEELRNLGGEKDFLHEDDIQKFPYFKAMIKETLRLHLPAPLLVPRETNEPCILEGYEIPAKTIVYVNAWAIHRDPNTWKDPEEFLPERFLDSTTDFRGQDFEFIPFGAGRRICPGMLMAIASLDLILANLLRSFDWELPSGMRKEDIDTEVLPGITQHKKNPLYVLAKFRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7AN37</accession>
    <name>V7AN37_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Photosystem II CP43 chlorophyll apoprotein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">PHAVU_010G068100g</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">cv. G19833</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7AN37"/>
    <dbReference type="STRING" id="3885.V7AN37"/>
    <dbReference type="Gramene" id="ESW06685">
        <property type="protein sequence ID" value="ESW06685"/>
        <property type="gene ID" value="PHAVU_010G068100g"/>
    </dbReference>
    <dbReference type="OMA" id="WICLRGS"/>
    <dbReference type="OrthoDB" id="1926060at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009523">
        <property type="term" value="C:photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016168">
        <property type="term" value="F:chlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009767">
        <property type="term" value="P:photosynthetic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.670">
        <property type="entry name" value="photosystem ii from thermosynechococcus elongatus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000932">
        <property type="entry name" value="PS_antenna-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036001">
        <property type="entry name" value="PS_II_antenna-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044900">
        <property type="entry name" value="PSII_PsbC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00421">
        <property type="entry name" value="PSII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161077">
        <property type="entry name" value="Photosystem II antenna protein-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="7" id="KW-0157">Chromophore</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="9" id="KW-0604">Photosystem II</keyword>
    <keyword evidence="4" id="KW-0934">Plastid</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="ESW06685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <evidence type="ECO:0008006" key="13">
        <source>
            <dbReference type="Google" id="ProtNLM"/>
        </source>
    </evidence>
    <sequence length="135" mass="14809" checksum="B0D7FA813791C596" modified="2014-02-19" version="1" fragment="single">ISNISLRSTRPWGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSIFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="43" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANI5</accession>
    <name>V7ANI5_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">1-deoxy-D-xylulose-5-phosphate reductoisomerase</fullName>
            <ecNumber evidence="6">1.1.1.267</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">PHAVU_010G023000g</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). Required for chloroplast development.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + NADPH + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13717"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:58262"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.267"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="15">
            <dbReference type="Rhea" id="RHEA:13719"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 1/6.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Plastid</location>
            <location evidence="3">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DXR family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="6"/>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANI5"/>
    <dbReference type="SMR" id="V7ANI5"/>
    <dbReference type="STRING" id="3885.V7ANI5"/>
    <dbReference type="Gramene" id="ESW06138">
        <property type="protein sequence ID" value="ESW06138"/>
        <property type="gene ID" value="PHAVU_010G023000g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPJ7">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CYSAGRA"/>
    <dbReference type="OrthoDB" id="3482at2759"/>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009507">
        <property type="term" value="C:chloroplast"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070402">
        <property type="term" value="F:NADPH binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051484">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="TreeGrafter"/>
    </dbReference>
    <dbReference type="FunFam" id="1.10.1740.10:FF:000006">
        <property type="entry name" value="1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.40.50.720:FF:000183">
        <property type="entry name" value="1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.720">
        <property type="entry name" value="NAD(P)-binding Rossmann-like Domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00183">
        <property type="entry name" value="DXP_reductoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003821">
        <property type="entry name" value="DXP_reductoisomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013644">
        <property type="entry name" value="DXP_reductoisomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013512">
        <property type="entry name" value="DXP_reductoisomerase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026877">
        <property type="entry name" value="DXPR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036169">
        <property type="entry name" value="DXPR_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="NCBIfam" id="TIGR00243">
        <property type="entry name" value="Dxr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="NCBIfam" id="NF009114">
        <property type="entry name" value="PRK12464.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30525">
        <property type="entry name" value="1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30525:SF6">
        <property type="entry name" value="1-DEOXY-D-XYLULOSE-5-PHOSPHATE REDUCTOISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08436">
        <property type="entry name" value="DXP_redisom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02670">
        <property type="entry name" value="DXP_reductoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13288">
        <property type="entry name" value="DXPR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006205">
        <property type="entry name" value="Dxp_reductismrs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69055">
        <property type="entry name" value="1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55347">
        <property type="entry name" value="Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="NAD(P)-binding Rossmann-fold domains"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0150">Chloroplast</keyword>
    <keyword evidence="14" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0521">NADP</keyword>
    <keyword evidence="12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-0934">Plastid</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="1-deoxy-D-xylulose 5-phosphate reductoisomerase N-terminal" evidence="17">
        <location>
            <begin position="76"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal" evidence="18">
        <location>
            <begin position="218"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="DXP reductoisomerase C-terminal" evidence="19">
        <location>
            <begin position="333"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00048543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00055737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF08436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF13288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="ESW06138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="465" mass="50800" checksum="52B82A3DA251B334" modified="2014-02-19" version="1">MALNLPSPVQVKPLFFSSNNSPKLPGNFCLKRKESDRIEERRVYCSAAAQSPPPAWPGTAIPEPSDFKTWEGPKPITVLGSTGSIGTQTLSIVAEFPERFKVVALAAGSNITLLADQIKTFKPQVVGLRNESLVDELREAIADVEHKPEIIPGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGAPFVLPLAKKHNIKILPADSEHSAIFQSIQGLPKGALRKILLTGSGGAFREWPAEKMKDIKLADALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGSDYDDIEIVIHPQSIIHSLVETQDSSVIAQLGIPDMRLPLLYTLSWPDRIYCSEITWPRLDLSKYGSLTFYAPDDKKFPSVNLCYSAGRAGGTMTGVLSAANEKAVELFVEEKISYLDIFKVVELTCQEHQKELVASPSLEEIIHYDQWARQYASNLQKASSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="48" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANJ4</accession>
    <name>V7ANJ4_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">AT-hook motif nuclear-localized protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">PHAVU_010G084600g</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2013-04" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P."/>
                <person name="Shu S."/>
                <person name="Cregan P."/>
                <person name="Rokhsar D."/>
                <person name="Jackson S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE</scope>
    </reference>
    <reference evidence="10" key="2">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">cv. G19833</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Nucleus</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="6">The PPC domain mediates interactions between AHL proteins.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW06886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANJ4"/>
    <dbReference type="SMR" id="V7ANJ4"/>
    <dbReference type="STRING" id="3885.V7ANJ4"/>
    <dbReference type="Gramene" id="ESW06885">
        <property type="protein sequence ID" value="ESW06885"/>
        <property type="gene ID" value="PHAVU_010G084600g"/>
    </dbReference>
    <dbReference type="Gramene" id="ESW06886">
        <property type="protein sequence ID" value="ESW06886"/>
        <property type="gene ID" value="PHAVU_010G084600g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QT7J">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="KSTDYAA"/>
    <dbReference type="OrthoDB" id="2014829at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005634">
        <property type="term" value="C:nucleus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003680">
        <property type="term" value="F:minor groove of adenine-thymine-rich DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11378">
        <property type="entry name" value="DUF296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="FunFam" id="3.30.1330.80:FF:000003">
        <property type="entry name" value="AT-hook motif nuclear-localized protein 1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.80">
        <property type="entry name" value="Hypothetical protein, similar to alpha- acetolactate decarboxylase, domain 2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039605">
        <property type="entry name" value="AHL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005175">
        <property type="entry name" value="PPC_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31500:SF96">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31500">
        <property type="entry name" value="AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03479">
        <property type="entry name" value="PCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117856">
        <property type="entry name" value="AF0104/ALDC/Ptd012-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51742">
        <property type="entry name" value="PPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0539">Nucleus</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="PPC" evidence="8">
        <location>
            <begin position="133"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="57"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Low complexity" evidence="7">
        <location>
            <begin position="86"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU367031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="ESW06885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="356" mass="36564" checksum="D272F9B0E0B0EBA2" modified="2014-02-19" version="1">MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGGGGGIGGAAAIGVSPVSVGLDGTTKKKRGRPRKYGPDGSVTMALSPMPISSSAPSSNNFSSGKRGKMRGMEYKQSKKLGLDYLGDLNSCSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQKLKKPKSTDYAAAAAAVSPVIAVSPAPPPPPPPPTNAEKEDVNINLMGGAHVLQNSGTLNSNLSPPNAFRRDNWVNMHSMPDSRKSATDINISLPDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="28" xmlns="https://uniprot.org/uniprot">
    <accession>V7ANM9</accession>
    <name>V7ANM9_PHAVU</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">PHAVU_011G212700g</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">cv. G19833</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CM002298">
        <property type="protein sequence ID" value="ESW05826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7ANM9"/>
    <dbReference type="Gramene" id="ESW05826">
        <property type="protein sequence ID" value="ESW05826"/>
        <property type="gene ID" value="PHAVU_011G212700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502RZTB">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="CSGVIVY"/>
    <dbReference type="OrthoDB" id="4573at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35106">
        <property type="entry name" value="BNAA07G25190D PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35106:SF4">
        <property type="entry name" value="OS09G0485800 PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="ESW05826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000000226"/>
        </source>
    </evidence>
    <sequence length="142" mass="16102" checksum="99BC896F748A08FA" modified="2014-02-19" version="1">MVFFSLSFSQSPLFCKPSFQLKCCSQSQNKAGTSHVQTNKRCLRCNTLYSDQDNSPLSCSFHGHTNGDKGLFSLAPPHQGIDGDWSEKSGVIVYKWNEMNNRPNTGRANWKKRWSCCAEYDENAPPCRRGCHVSYDDGFTLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2014-02-19" modified="2026-01-28" version="40" xmlns="https://uniprot.org/uniprot">
    <accession>V7APG3</accession>
    <name>V7APG3_PHAVU</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">GDSL esterase/lipase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">PHAVU_010G108700g</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Phaseolus vulgaris</name>
        <name type="common">Kidney bean</name>
        <name type="synonym">French bean</name>
        <dbReference type="NCBI Taxonomy" id="3885"/>
        <lineage>
            <taxon>Eukaryota</taxon>
            <taxon>Viridiplantae</taxon>
            <taxon>Streptophyta</taxon>
            <taxon>Embryophyta</taxon>
            <taxon>Tracheophyta</taxon>
            <taxon>Spermatophyta</taxon>
            <taxon>Magnoliopsida</taxon>
            <taxon>eudicotyledons</taxon>
            <taxon>Gunneridae</taxon>
            <taxon>Pentapetalae</taxon>
            <taxon>rosids</taxon>
            <taxon>fabids</taxon>
            <taxon>Fabales</taxon>
            <taxon>Fabaceae</taxon>
            <taxon>Papilionoideae</taxon>
            <taxon>50 kb inversion clade</taxon>
            <taxon>NPAAA clade</taxon>
            <taxon>indigoferoid/millettioid clade</taxon>
            <taxon>Phaseoleae</taxon>
            <taxon>Phaseolus</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="journal article" date="2014" name="Nat. Genet." volume="46" first="707" last="713">
            <title>A reference genome for common bean and genome-wide analysis of dual domestications.</title>
            <authorList>
                <person name="Schmutz J."/>
                <person name="McClean P.E."/>
                <person name="Mamidi S."/>
                <person name="Wu G.A."/>
                <person name="Cannon S.B."/>
                <person name="Grimwood J."/>
                <person name="Jenkins J."/>
                <person name="Shu S."/>
                <person name="Song Q."/>
                <person name="Chavarro C."/>
                <person name="Torres-Torres M."/>
                <person name="Geffroy V."/>
                <person name="Moghaddam S.M."/>
                <person name="Gao D."/>
                <person name="Abernathy B."/>
                <person name="Barry K."/>
                <person name="Blair M."/>
                <person name="Brick M.A."/>
                <person name="Chovatia M."/>
                <person name="Gepts P."/>
                <person name="Goodstein D.M."/>
                <person name="Gonzales M."/>
                <person name="Hellsten U."/>
                <person name="Hyten D.L."/>
                <person name="Jia G."/>
                <person name="Kelly J.D."/>
                <person name="Kudrna D."/>
                <person name="Lee R."/>
                <person name="Richard M.M."/>
                <person name="Miklas P.N."/>
                <person name="Osorno J.M."/>
                <person name="Rodrigues J."/>
                <person name="Thareau V."/>
                <person name="Urrea C.A."/>
                <person name="Wang M."/>
                <person name="Yu Y."/>
                <person name="Zhang M."/>
                <person name="Wing R.A."/>
                <person name="Cregan P.B."/>
                <person name="Rokhsar D.S."/>
                <person name="Jackson S.A."/>
            </authorList>
            <dbReference type="PubMed" id="24908249"/>
            <dbReference type="DOI" id="10.1038/ng.3008"/>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">cv. G19833</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 'GDSL' lipolytic enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CM002297">
        <property type="protein sequence ID" value="ESW07185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="AlphaFoldDB" id="V7APG3"/>
    <dbReference type="SMR" id="V7APG3"/>
    <dbReference type="Gramene" id="ESW07185">
        <property type="protein sequence ID" value="ESW07185"/>
        <property type="gene ID" value="PHAVU_010G108700g"/>
    </dbReference>
    <dbReference type="eggNOG" id="ENOG502QPIT">
        <property type="taxonomic scope" value="Eukaryota"/>
    </dbReference>
    <dbReference type="OMA" id="GFHTAFP"/>
    <dbReference type="OrthoDB" id="1600564at2759"/>
    <dbReference type="Proteomes" id="UP000000226">
        <property type="component" value="Chromosome 10"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01837">
        <property type="entry name" value="SGNH_plant_lipase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035669">
        <property type="entry name" value="SGNH_plant_lipase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22835:SF509">
        <property type="entry name" value="GDSL-LIKE LIPASE_ACYLHYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22835">
        <property type="entry name" value="ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52266">
        <property type="entry name" value="SGNH hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferre
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